Carg21491 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21491
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	mediator of RNA polymerase II transcription subunit 16
Location	Cucurbita_argyrosperma_scaffold_146 : 202730 .. 214574 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATTGCGACTTTCCACCACTTACGTCCTCTCTCTCTCTCTCTCTCTCTTTCTATATAAATTAGGGTTGTCGTCTTTTCAATGAGTCAAGTTTCCAACGCTACGGAAGGGGAGGAAGAACCCCTGGTTCAGCCTTTGGAGCTTCCCAAAGGGTCTGACAAAACTGAAGTTGTGGCTGTTGAGGAGGAGGTTATGGAGAAACCCGAAGATCCAATGGACGAGGACTTGATCAGTCCGGCTACTGTTTTTCGAATCAAGCTCAAGCAGCCAAGATCCAATTTGCAGTACAAAATGAGTGTTCCTGAGCTCTGTCGCAATTTTAGGTTAGTTTTGCTTCTTGGGTTTTAACTTTTAGCTGCTGTTTATTTTATGGTTTTTGGATATTCATGCTCAACGAGTTGAGCTAGGAGTTGATACGTGCTTGGAATTGTATGATTATAGCGTTGAGGTGTAAATTGGGTATGCACTTCGTGCTTTTAGTTCCCATTTTTTTGTTTGATTTTTTATGGTAAATATTTCAATGGTTATGGCACGTGGAGAATTGGGTGCAATTGCTCCCATTTACTAGTTTCTCAATTCGGTGGGTTTATGCTTCAAGTTTTATCTTATAGGATTTAAGTTACTTCAAGGAGCTTCAATTTCATCCTTCTCTGCTGGTTTTCTTTTTTCAGTGCTGTTGCTTGGTGTGGTAAGCTGAATGCTATTGCCTGTGCATCGGAGACATGTGCAAGAATTCCAAGGTTAACATTCGTTTATCTTTTGATCACGTTTTGAACGAGTCATGTGGGTTCGTGGTTTCATCTCAGAGGAGCATACGATGAAATAAATCGTATCCCACCCCGAGCTATTTTCATTTCTAGAAATTGTTTGCTCTGCATACGCCAGGAATTGAAGGAATTTAGTTGTACAATTAATGTTCATCTTACAACTACAGCTACTCTATTTATGAAACACGTCCTGTAAATCAATGGCAAGAGAATTTTTTCCCCTTCTCCGGACATGGTGTCTAATATGTGATCCAAATAAAGGATTCTACTGCCGTTACCGTATCGATTAAACCTTGTTTCATATTTTGTCTTTGTATGATTTGTCTTCTAAGTGATTATATCTTTTGACAGTTCCAATGCAAACCCACCATTTTGGATCCCCATTCATATTGTGATTCCTGAGCGACCAACCGAGTGTGCCGTGTTTAATGTCATTGCAGGTATGGTGTATGCTAATGTGCTAATATACCTTACCGTTCCGTTACTCATTAACTTTATAGTGATATTTTACCGATGGAATCCTTACAACCACCAAGTATGGAGATTTTAGCATGTCTGTTTGTAAAGCTGGGGATCCAATAAACCTAGAATTTTTGGCTTTAGTAGTATTCTTTTGCTTGGCTTGCAGCTGTTATTTTATTTTGGTCGTAACAATCGTATCCTGGATTCTTTAGTTTATTTCTGCTGCGTATTTGGGTAGTTGGGCGGTTAGCTTGGTCCTTCCTCTGTATAGAGGGCCGGGCCTTTATTTTGAAAGTAGGGTACTGTTTTAAATAGAATTCCTTAGAGTTTTACAGTCTGATACATTGATTGACTGTAGTCCTTTGATTCTTGATTCTTGATAATCCTTCTCTACATTTTCTGGCCCTTGTATTGGTTTTTCATATCAGGATAACAGTTGGTGGCTATTTACATAGTCTAACGAGTAAAGAACTTGGGAGAAAGTTCAGTTTGTTTAGGACAATTGAATAGGAGAGGTATCACTGTCGGTAAAACACCATTATTTCAGGAAAAATAAAAAATAAATTAATTTTTATGATTTTCCCCCAGATGCATTTTATTTTCCTTATTCAAAATTTTAAAACGTTCTTGACATTTTCAATCAAATGTATTTCACATTCTGCAGATTCTCCACGTGATTCGGTACAATTTATTGAATGGTCACCAACTTCCTGTCCACGTGCTTTGCTTATAGCTAATTTCCATGGGAGGTCAACTATCTGGACTCAGCCATCTCGAGTAAGCTCAAATTTTATTTCTTTCTTTTGCAGAATTAAGATTTCAGAATGATTGATGTTTTTAAAGGTTCATGTCACGAACTTTGCCTATTAGTGGTCTTGCATGTGCTCTTGAACTATATATGTTTTTGGCTGCAAGCATGCATCTTTTCTTGTTTTAGTTTGTTTTACCGTTCTATTTTCCTCCAGGGTCCAGCTAACCTTGTACGTGATGCTAGCTGCTGGCAGCTTGAGCATGAATGGCGACAAGATATTGCAGTTGTTACGAAGTGGCTGTCAGGGTTGTCTGCAGTATGTTATTATCTATGATATGTAGTTTTAATGGTGCATTTACTTTCTAAGTTATGCTATTAGTTTGTAGGCTGCGATTAATTTTCCTTCTAGCAGTTTCATTAATTCTTTTATGGTGGGAAGTTGGTTGAAGTGTAAGGCCGATTTCTGCTATGAAAAATTTATGATGATGATTGTCCCTTCATAGCTTTTTCCCAGTTTGCTTGTTACTCTAAGGTTTAGACTTAAGATCAATCTAATAACCTTTCTAGAATTTAACTTCTTAGCAATTGTAAATGCTGCACAAGTACACTAACTCAAGCATAAAGGTAGTACTTGAAATTTCATTTGGTTTTGAATGATTCATTGGAGCTTCTCTATTATGTTAAATTTGTAATGAGAGGTTTACTCATACATCTATATGCATTTTTTTAATCAATCATGGCATTGCCTTGCATTCCCTCATTTTGGTGGTAATTATCGTTTCTTTTAGTTTCAATCGATTTCATACCTTAGGTCAATTGTCTTCTTTTTCATTTTGGCGACTACTTTCTGAATAATTTTTTAACATGTTCAAAATACCAGTATAGGTGGCTTTCAGCAAAATCTAGCTCATCAAACTCCAAGCCAAATTTTGAGGAAAAGTTTCTTCCACAGCAGTCGCAAACGTCAGGTTGCTCCGAACTTTAAATTATTTTCATATCATTTACGTTTGCTTGTATCTGATTCTACAGATTTGTAGCTCAGGATCCAGTTATCAACCTTGGAACATTTGATTCGCTGCTGCTCTGTGTTGTTTATAAAATTATCTAAATATATTTTTTTGTCCAATGTTCCTAAATGTCCACCTTGAATTAGCCCAATGATCAAAGGGCAAACTAGAAATCTATTTATTATTATTAATTTTTTGAGTTAATGAGTTCAAACCACAGTGCCATTTACCCTAGATATTAAATGTCCTACAAGTTTTTTGATAACAAATATTGGACGTTTTGGTTTTTGTCTTGTGGGAACTACCCAAGGTATATGTGCCCTTACTTGGGTACCCTGGTTTTTTTAAAAAAGAAAGAAATATATGTCCCGAATTTGTTGAATATTCTTAAGAGATGTCTAATGCAGTAATTTGCTTGTGTTTCAGCTAGGTGGCCAAATTTTCTTTGCGTTTGCTCGGTTTTCTCTTCAGGCTCTGTTCAACTTCATTGGTCCCAGTGGCCTTCTAGTCAAAATAGCTCACCATCAAAATGGTTCTGCACAAGTAAAGGACTATTGGGCGCTGGACCAAGTGGGATCATGGCTGCTGATGCCATCATAACAGATAGTGGTGCCATGCACGTGGCAGGGGTTCCAATTGTAAATCCATCCACTGTTGTTGTCTGGGAGGTTACTCCTGGCCCTGGAAATGGTTTTCAAGCCACTCCGAAGACAAGCACGAGCAATGGGGTCCCTGCTCCACTCAGTCCTCCTAATTGGTCTGGTTTTGCCCCATTGGCTGCATACCTGTTTAGCTGGCAAGAATTTTTATTATCTGAGTTAAAGCAAGGAAAAAATAAGACGCAAGATGTTAATGATAGTATTCCACTTCATTGTTCACCAGTTTCTAATTTTTCTGCATATGTCTCTCCTGAGGCTGCAGCTCAGTCTGCCACAACTACTACGTGGGGTTCTGGAGTTACTGCTGTTGCCTTTGATCCAACTCAGGGTGGCTCTGTTATAGCTATTGTAATAGTCGAGGGTAATTATCTGTACAATGAATTATAACTTAGCTTCTCATTCATATCCTGAAAACTTCATTAATTTTTTTGCTTTATTTTCCTGTGAGAGGAACTCTTTCACCATGTGGGAAGTGTGGACGTCTAGAAATGTATGCATTTTTTATGATGTGAGGGGATTGCTGGCTTGGTATAGAGCTTAATTAATAATACCTTTCCATGGGCTTTGATCTTCAAACGTTTTTGCAATTGCCTGCTTTTTCCCCCTTCCTTTTGGTAGCTGCAACCTCTTTCTTCTTTATTTTTGTTTGATCTTAATTCTTGTTTTTTGGGCAAAATCCATTATACAACCCAGTCCTTAATCTTATTGTTCCTTTATCGGTTAAAAGAAATTTAACCTTTTCCAATTAGTCCTTTTTACATTTCTCAGTCTGATGATCAATTACTCATGCAGGACAATACATGTCTCCTTATGATCCTGATGAAGGTCCTTCAATTTCTGGGTGGAGAGTGCAACGCTGGGAATCTTCACTTCAGCCTGTTGTTCTACATCAAATTTTTGGAAGTCCCACTGCCAGCTTTGGTGGTCAGGCACCCATGCAAACAGTTTGGTTATCTAAAGTGGACATGAGTATTTCACCAACTAGTGATTTTAAATCTAATCAATCAACAGCATCAGGACCAAACTCTGATCTACAGAAGTTGTCTGGAGCTTATGTTGATAAGGCAAAAAGAGTTTGTTTTGATCCATTTGATCTTCCCAGTGATGTTAGAACACTTGCTCGAATAGTGTATTCTGCTCATGGTGGCGAAATTGCTGTTGCTTTTCTCTGTGGTGGGGTGCATATTTTCTCTGGTCCAAACTTCGCTCCTGTTGAGAACTACCAGATCAATGTTGGACCAGCCATTGCGGCCCCTGCCTTTTCTTCCACTAGCTGCTGTTCAGCGTCTGTTTGGCATGAAGTGAATAAGGACTACACCATGTTGAAGATCATTCGTGTTCTTCCTCCTGCAGCTCCTAACAATCAGCTGAAGGCAAACTCTTCAACTTGGGAGCGTGCAGTTGCTGAAAGGTGACTTGATGGTGCTCATTCTTTGGTATTTCTTATAATCCAATGACAATATTATGTGCTACTTCTCCGCTGAAGTATTGGATGAGTTTTCTTGTCATGGTTCTGATTATGAATATTTATTGTTAATGTAGATTTTGGTGGAGCCTTCTTGTCGGTGTTGATTGGTGGGATGCTGTTGCCTGTACGCAGAGTGCTGCTGAAGATGGCATTGGTATGAATGATTGAGTTTTTTGTTATTGTCGCAACAGTAATGACAGTGCAAGTGAGAGGTCAAGATTCGTTTAAATAACACGATAGTTTTTGAAAGTCATTTCTAATCGATGAATATGTCATTTCAGTTTCTCCAAATAGCGTCATAGCAGTGTTGGATGCTGATTTTCATTCACTTCCTTCTAGCCAGCACAGGCAGCAGTATGGTCCTGTAAGTTCTATATTGTTTTGTTATCACCGAAAATAGCAATTTGAGTCTATTCGAACTATTTTTGCATTCAGCTACCCAGATCTCAGAGTGCACGCGATTTTTTGTTTTTTTTATTTGCATTTCTGGAGGCTTTTGTTCACTGATTTAAGCTACCTTATGAATCCATTATTTGTGTCTGTTTTTCTTTCTTTTATCTGATTGGAGGTTTGTACTGTGTTTGTTTCATTTTCTGGCTTATTCTGGTAATCCTTTATCACTTAAGTTGTGGGATAATTTACATCTAATGTGAAACTTCGAGATCAAGTTTGTTTCATGTGGTGGTTCCTGGTGTACCTTAGAACTTGTGAGTTATGGTGGCATCAAATGTTAAGTTTAATCCTGTTGATTGAAAATTGCTTTGAAACTGTTTTGTTGGCTACTTGATTTCGTGTTTTACTATGGAGGAATGCTATGGAAGAAAACTATTGTAAATATGTTATAAAGGAGGAGCAGGTTTCCTATCTCATGCTGTCCCTCTAGTTCTTGTAGCCCTTCATGTGGTGTTTTCCATTGTGAGAATATTTTTCGTTAAAAGTTCAGATTAAAGTGGATGGTGGCACTGGTAATTTGGGTTTGGTTGGACCCTTGGCCTGAAGTGGTTTCCCATAGGAGAAGTTTCCTTGGCCTTTTAGCTTGGCTTTGGATAAAAGAATCACAATGGAAGGGGCCTGGTGTGCTTCCTTGAGTTTCTGGCCAATCATCTTTAGAAAATACTTCTCGAGAATTCTTTGCTCTTATAGCTCTTCAGCTTCCCTTTCTCTCAAGACAGTGGTGCTAGTAATTGGCTTCTTGAAAAATCAGGGTTCTTCTCAGTGAAATCTTTGTTGTCCTGTCTTTCACAGGGTCCTCAAGTTGTCCAGTCGGCTCTATATTTAGGTCGGGTGAACATTATTGGCGAAGTACAACGAAGTTCTTCATGTTTGTTCCTACAACCGAACTTGTGCTGTTTATAAGGATTTTAGAACCAAGACCACCTGCTTCTTTTCTGCCCAGCAGCTTAAGACCTATGGTGCGAACTGTTGGGCTTTTCTTCAATAATCTTTTTTTATGCTCAGAAATGTGAGAGAATGACTTCTCTTAGACTTTGTGGTCTTAGCTTAAGGATAAAAGGCAACGTTTTGTTCATTAATAACTTCCCAAAGTTTCTTCAATGTTACTACTTTCTGGAACATGGATGAATGGTGGGATGAATCTGTCTTTGTTTCTATTTGTCGGTGTCTTAGGTTCTCTATGTCTTCGTTCAAGACCCTATTTGCACAGCCATTTTTGTTTATTTCATCGTGTTTTTATCTTAAAAGATATTCACATTGACCTTCCTCTCATTTTCTGAGTGCTGGTTAATCATATTGTAGAGAATCGTGACCTGTTTTCGTAACTGCCTACGTACTTATTTTCATTTTTTTTTTCTCTTGTCCACAAAACAGAGCTTGGACAGGATAAAATGTAGATTACTGGAAGGCACTAATGCCCAAGAAGTCAGGGCAATGGTTTTAGATATGCAAGCAAGATTGTTGCTGGATATGCTGGGCAAAGGAATTGAATCTGCTTTAATAAACCCGTCTGCTTTACTATCTGAGCCATGGCATGCATCCGGTGAAACATTATCCGGCATTGATCCTGAAGCAATGGCGGTAGAACCAGCACTGATCCCTAGCATTCAGGTTTGATTTGTCTAGCTTCAAATTTGTCCTTTATATATTTATTTCAGTAAAAAAGCTTGAGTATTGATGCATTCATAGGAACTTATGAAATGCTTTTGTCTTTCACCACGATAGCGTGGCTTGGGTATATTGGCCCTCCAAATATGCCTAGCCACTTTTTAGCAGAAAAGAGTGGCTATAGCTTTCTAATGACAATTGAACTGTGGGAAAGGGCATGAGTTAATTGCCCCTCTCTTTTACTTTTAGATTTATCAAAATCATCTCTTTCCCTTATTTTGAGGGTTGCAAAGTGATGCAGGCTTACGTTGATGCTGTCCTTGATCTTGCTTCACATTTCATTACACGTTTGCGACGTTATGCTAGTTTCTGTCGCACTTTGGCAAGTCATGCTGTTACAGCTGGAACTGGTAGCAACCGAAATATGGTAACTAGTCCTACCCAGAGTTCTGCATCTCCTGCGACAAGCCAGAGTGAGTTCACTCGATTTCCTTATATATGAATTGTTGAAAAAGAGATCTCTCTGTTATCTTCCCATATTGAAAATAGTAAAGTTTTCAGACTTCAGACGATTTGTTTCTTTATTTGTTCAGTTTTATTTATTTCTTTAAATTTTAAAATGTTTTAATAGTTTTGTTTGTTTATGAATGAATTTTATTTTATTTATTAATTAGCAGCTTTAAGATGGCTTATTTTCTTTGAACTTGCGGAGTTGATGCCTAGAAAACTCCTTTGTTGTTTTGTTCGAAAATGGAGGCATGATCACATCCAGGTTAATCTAGGTTGCATGTAATTTAAAATTTTTATCGCATGTTTCCAGGTGCTCAAAGCGGTACAACAAGTTCAGGAAGTACCCAGATGCAAGCTTGGGTACAAGGTGCGATTGCCAAAATTAGTAGCACAACTGATGGAGTAGCCAGTTCAACTCCAAACCCCATTAGTGGTTCATCTACCTTTATGCCAATAAGCATAAATACTGGAACTTTTCCTGGAACCCCAGCTGTTCGGCTTATTGGGGATTGCCATTTTTTACATAGATTATGCCAACTTTTGCTCTTCTGTTTTTTCTTTCGCCGAACACAGCTTCCCCGTTATATTAGTAATTCACAAAAAAATGCTGATGCAAACATCCAAAAGCCTCAACCCGCTGTTCCTGGGAAAGTGGAGGAGATTAGCTCCAATTCTGTCAAGCCAGTGCCAAATATAATTAAGCCTGAGGAAAGTCAAATAGCTCGAGCTGTTCCGCTTGTAACTGGAGCTAAAGGAGCTGAAGAAGGGCTTGCTGGTAGGTCAAGAATCGGTACAGGCAATGCTGGTCAAGGATATACTTCTGAGGAGGTAGAACAAGTTATTTTGTTTGAGTTTTGGTACAGATTATCTATTCCTTTCCTCCTTTTTAGGCTTCTTGGGATAATTCCTAGATTACCCGAGCTTTCTAGTTGGTGGTATTTACCATTGGTGGTATCGGCATCAGGGTGATTCTTTTTATTTGCAAGGATAGATCCTAATTTGGCATGAAGTTAATTAGGTGAGTTCATAATTTTAGTGTAAAAGAAGGCTTCAACTGCTTTAATTTTTACTCTGCAGGTGAAAGTCCTTTTCCTCATACTTATAGATCTTTGCCGCCGTACTGCTAGTCTTCCACATCCATTACCAGTCTCCCAGGTTGGGAGTAGTAATATCCAAGTGCGTCTGCATTATATTGACGGCAACTATACTGTATTACCTGAAGTTGTGGAAGCATCCCTTGGTCCACATATGCAGGTATTTAATGTTTGTTGCTTTCATGGATTACGGAGTTTGTATCTTATTTTCCCATAAAATGTTTTGTGGCAATGAGTTAAGGAATTGATACTTTTTATCCCATAATCATGAAAATGCTAATAATATATGTACTACTACTGTTATAACAGAAGACCAAATAGTTTCTTTGATTCTGTCACTTATCGCCCCCCTTGAGATGGTCAGAGAGACCGTATGGATAGTTGAAGATAATTTCTAACTTTGATGGTGGTTGGGCGTAGGTCTAACACTGAACATTGACCTAACATCTGCTGTGTAACTGGAAGTCCTCGAGTGTTTTATTATTATTATCATTATTAAATGGAGAAACAAACAGGAAGTCCTAGAGTTGACATTTACTTGTCGATCTAATTACAATCATATGACTACCTTTGTCCTCTGATTTTTTGTTGGGGCAACCTTTTGCAGCCCTTGTGCTTGTTTTTCATCGTTCCTCCGTTTTGTGCTTTAACCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCAAAATAATAATAATAATTTTCCTTCTGATGGTCTGGCTGCATAGAATATGCCCCGGCCTAGAGGTGCAGATGCTGCTGGTCTGTTGCTTCGGGAATTAGAACTTCACCCTCCAGCTGAAGAATGGCACAGGCGGAATATGTATGGTGGGCCTTGGTCTGATGTAGATGATTTGGGATCCACAGACGATAATTCCAAGCTTAGTAATTCGTCAGACCCACTTGATCTCAACTCATTGGAAAATTGCAATGTTTATTATGGAGCTAATGGTTTGTGGCCTAGAAAGCGCAGGATGTCTGAAAGAGATGCTGCTTTTGGCTTGAATACGTCCATTGGTCTCGGAGCATACCTAGGTATAATGGGATCTCGTAGAGACGTTGTGACTGCTGTCTGGAAGACTGGTCTTGAAGGGGTTTGGTATAAGGTCCGATATGTAGTTCCCTTCTTACTCTTCTCATATTATTTCAATGATTCAAGTACAGTGACGTTTCTTTTGAAGTATTGAGACCTTGAGAGACATTGATAGGTTGAAGACAATAAAAATTACATTCCAAAATCTCCTACATATTTAGTTCAATAAAAAGGATAATTTTTTTTTTCTCGCTTAAATTGTGTCAGTATTTTTAAAATTTATTCAACTCTAGAAGCAGAAGCCAATGAGTTATTTTGCAATAATACCTGTTTGCTGCAACATGCTTCTAGATTTAAATGGCGTCATGTTTATGGTGTATTACTTTAAATTTAGAAGGATTGACTACTTCTACAGACTATACGTTGCTAATCTTTGTGTTGTATTCATTGTGAATCTTCCGACTTTGTGATTTGCAGTGCATGAGATGTTTGAGGCAGACATCAGCCTTTGCTTCACCTGGTGCTACTAATGATACTACTCAAAACGAGAGGGAGACTTGGTGGATTAGCCGATGGGCTTATGGATGCCCAATGTGTGGTGGAACATGGGTTCGAGTAGTATAGTTATGCCTTGCCATGTACAACCCTGGCTTCAACAATAGGGTCGCAATACTCACTTTCATCCAGTGATGTTCATTGTGTCATTTATAATTTTGCAGACCAAAATTTTAAAATGTCCTTTCCTTAAGTTCATGCAATCAAATTGCTTCATTTGATAAAATATGGTTACATCAGATAGGGGATACAGTTGCACGAGTTAGAGGATGAACTGCATTTCACCTTGTTTAGCACTGCCTGTGCCAGCTCTTCTCACCGTAAGGTATGTTTATTTGATTTTCTGTTCTCTGAATTTTCTAATTTGGAAAATAGTTCATTTTTCCAGTTTCCACGCTGTTATTGAAATTAACCTCCGGGAAGTTGGGTACTATCTGGTCTTCTAACTCTTTATTCTGCCTCTAGAAGATAAATAGAAAGGGAATTAGAAAGTAGAAAAGTAGCTATTGAATAGACATCAAAAGAGACTGAAGGAGCCTCATTAACTGAAAGTCCTGATTATTTTGAACTAAGGAGCTGTCCTAAATGCCATTGGTTAAATGAAAATGTGCCGTAAGTACTAATATAATTTGAGTAGCAGATTGAGGGACTAATGGTTATGGCTCTCTTTTTTGTTTGATAGGTTATGAGAGGAAATATGGATGTAGGGGAATCCTGTTTCCTTCACTGTTCTATCTTTCAAATTCTTGATGGAAATAAATGAATGTTGAAAGTGTCATCTTTTACGTGTGTTTTGTGCCTGATACACAAATTACCAATACACTGTACAACCAATAAAAGTTTTTATTCTTATTGAGAAATGACCAACTGCAGGAGATATGCACCTTACAGTTTTGTTGCTCTTTGGTTCTCCACCTTTAATTTTAAACCTCTTTGAAATTACAGGTTGGAGTTTCTCTTGCGTATGGGGAGCTTGACGAGTGCCATTATTATCTTGTTCATAAAAATTCTCAGTACAGTGACCAATAACAAGAAGAATGTCCAGCTTAGAAGGCAAGATATTAGTTAATTTCATGGGAAGTAGATACCTGATTCATTGCCATCAGAGTGGGAGGTGGGGGCAGCGGGGCGTGTAGCTGAGGCAGAGTATTTTAGTTTTGTACATGGTAGACCAGTGTTGTTTCAGAAGAGTCGAGCATGGAGATAGACGATGGAAGCCTTAAGGCCTCCTTAGGCTGCAGTTGTACACGTATAATTGATAATATTAGCGCCACCTGGATGACAGTGGCTTGCATGACTTGTGTAGAAATAGACACTACAAAAAATATGAATTTTTGCATAGATTATTTGAACAGAACAGTACGACTCCATTTACTTGCTACCCTCATGATTCATGAGAAAGATGACATCCCTCATTAAAAGCTTGTAGTATGCAGGCTTTGGCGTAATTTTTTCTAATGTAATTTGTTAATTATTTAACT

mRNA sequence

TCAATTGCGACTTTCCACCACTTACGTCCTCTCTCTCTCTCTCTCTCTCTTTCTATATAAATTAGGGTTGTCGTCTTTTCAATGAGTCAAGTTTCCAACGCTACGGAAGGGGAGGAAGAACCCCTGGTTCAGCCTTTGGAGCTTCCCAAAGGGTCTGACAAAACTGAAGTTGTGGCTGTTGAGGAGGAGGTTATGGAGAAACCCGAAGATCCAATGGACGAGGACTTGATCAGTCCGGCTACTGTTTTTCGAATCAAGCTCAAGCAGCCAAGATCCAATTTGCAGTACAAAATGAGTGTTCCTGAGCTCTGTCGCAATTTTAGTGCTGTTGCTTGGTGTGGTAAGCTGAATGCTATTGCCTGTGCATCGGAGACATGTGCAAGAATTCCAAGTTCCAATGCAAACCCACCATTTTGGATCCCCATTCATATTGTGATTCCTGAGCGACCAACCGAGTGTGCCGTGTTTAATGTCATTGCAGATTCTCCACGTGATTCGGTACAATTTATTGAATGGTCACCAACTTCCTGTCCACGTGCTTTGCTTATAGCTAATTTCCATGGGAGGTCAACTATCTGGACTCAGCCATCTCGAGGTCCAGCTAACCTTGTACGTGATGCTAGCTGCTGGCAGCTTGAGCATGAATGGCGACAAGATATTGCAGTTGTTACGAAGTGGCTGTCAGGGTTGTCTGCATATAGGTGGCTTTCAGCAAAATCTAGCTCATCAAACTCCAAGCCAAATTTTGAGGAAAAGTTTCTTCCACAGCAGTCGCAAACGTCAGCTAGGTGGCCAAATTTTCTTTGCGTTTGCTCGGTTTTCTCTTCAGGCTCTGTTCAACTTCATTGGTCCCAGTGGCCTTCTAGTCAAAATAGCTCACCATCAAAATGGTTCTGCACAAGTAAAGGACTATTGGGCGCTGGACCAAGTGGGATCATGGCTGCTGATGCCATCATAACAGATAGTGGTGCCATGCACGTGGCAGGGGTTCCAATTGTAAATCCATCCACTGTTGTTGTCTGGGAGGTTACTCCTGGCCCTGGAAATGGTTTTCAAGCCACTCCGAAGACAAGCACGAGCAATGGGGTCCCTGCTCCACTCAGTCCTCCTAATTGGTCTGGTTTTGCCCCATTGGCTGCATACCTGTTTAGCTGGCAAGAATTTTTATTATCTGAGTTAAAGCAAGGAAAAAATAAGACGCAAGATGTTAATGATAGTATTCCACTTCATTGTTCACCAGTTTCTAATTTTTCTGCATATGTCTCTCCTGAGGCTGCAGCTCAGTCTGCCACAACTACTACGTGGGGTTCTGGAGTTACTGCTGTTGCCTTTGATCCAACTCAGGGTGGCTCTGTTATAGCTATTGTAATAGTCGAGGGACAATACATGTCTCCTTATGATCCTGATGAAGGTCCTTCAATTTCTGGGTGGAGAGTGCAACGCTGGGAATCTTCACTTCAGCCTGTTGTTCTACATCAAATTTTTGGAAGTCCCACTGCCAGCTTTGGTGGTCAGGCACCCATGCAAACAGTTTGGTTATCTAAAGTGGACATGAGTATTTCACCAACTAGTGATTTTAAATCTAATCAATCAACAGCATCAGGACCAAACTCTGATCTACAGAAGTTGTCTGGAGCTTATGTTGATAAGGCAAAAAGAGTTTGTTTTGATCCATTTGATCTTCCCAGTGATGTTAGAACACTTGCTCGAATAGTGTATTCTGCTCATGGTGGCGAAATTGCTGTTGCTTTTCTCTGTGGTGGGGTGCATATTTTCTCTGGTCCAAACTTCGCTCCTGTTGAGAACTACCAGATCAATGTTGGACCAGCCATTGCGGCCCCTGCCTTTTCTTCCACTAGCTGCTGTTCAGCGTCTGTTTGGCATGAAGTGAATAAGGACTACACCATGTTGAAGATCATTCGTGTTCTTCCTCCTGCAGCTCCTAACAATCAGCTGAAGGCAAACTCTTCAACTTGGGAGCGTGCAGTTGCTGAAAGATTTTGGTGGAGCCTTCTTGTCGGTGTTGATTGGTGGGATGCTGTTGCCTGTACGCAGAGTGCTGCTGAAGATGGCATTGTTTCTCCAAATAGCGTCATAGCAGTGTTGGATGCTGATTTTCATTCACTTCCTTCTAGCCAGCACAGGCAGCAGTATGGTCCTAGCTTGGACAGGATAAAATGTAGATTACTGGAAGGCACTAATGCCCAAGAAGTCAGGGCAATGGTTTTAGATATGCAAGCAAGATTGTTGCTGGATATGCTGGGCAAAGGAATTGAATCTGCTTTAATAAACCCGTCTGCTTTACTATCTGAGCCATGGCATGCATCCGGTGAAACATTATCCGGCATTGATCCTGAAGCAATGGCGGTAGAACCAGCACTGATCCCTAGCATTCAGGGTTGCAAAGTGATGCAGGCTTACGTTGATGCTGTCCTTGATCTTGCTTCACATTTCATTACACGTTTGCGACGTTATGCTAGTTTCTGTCGCACTTTGGCAAGTCATGCTGTTACAGCTGGAACTGGTAGCAACCGAAATATGGTAACTAGTCCTACCCAGAGTTCTGCATCTCCTGCGACAAGCCAGAGTGCTCAAAGCGGTACAACAAGTTCAGGAAGTACCCAGATGCAAGCTTGGGTACAAGGTGCGATTGCCAAAATTAGTAGCACAACTGATGGAGTAGCCAGTTCAACTCCAAACCCCATTAGTGGTTCATCTACCTTTATGCCAATAAGCATAAATACTGGAACTTTTCCTGGAACCCCAGCTGTTCGGCTTATTGGGGATTGCCATTTTTTACATAGATTATGCCAACTTTTGCTCTTCTGTTTTTTCTTTCGCCGAACACAGCTTCCCCGTTATATTAGTAATTCACAAAAAAATGCTGATGCAAACATCCAAAAGCCTCAACCCGCTGTTCCTGGGAAAGTGGAGGAGATTAGCTCCAATTCTGTCAAGCCAGTGCCAAATATAATTAAGCCTGAGGAAAGTCAAATAGCTCGAGCTGTTCCGCTTGTAACTGGAGCTAAAGGAGCTGAAGAAGGGCTTGCTGGTAGGTCAAGAATCGGTACAGGCAATGCTGGTCAAGGATATACTTCTGAGGAGGTGAAAGTCCTTTTCCTCATACTTATAGATCTTTGCCGCCGTACTGCTAGTCTTCCACATCCATTACCAGTCTCCCAGGTTGGGAGTAGTAATATCCAAGTGCGTCTGCATTATATTGACGGCAACTATACTGTATTACCTGAAGTTGTGGAAGCATCCCTTGGTCCACATATGCAGAATATGCCCCGGCCTAGAGGTGCAGATGCTGCTGGTCTGTTGCTTCGGGAATTAGAACTTCACCCTCCAGCTGAAGAATGGCACAGGCGGAATATGTATGGTGGGCCTTGGTCTGATGTAGATGATTTGGGATCCACAGACGATAATTCCAAGCTTAGTAATTCGTCAGACCCACTTGATCTCAACTCATTGGAAAATTGCAATGTTTATTATGGAGCTAATGGTTTGTGGCCTAGAAAGCGCAGGATGTCTGAAAGAGATGCTGCTTTTGGCTTGAATACGTCCATTGGTCTCGGAGCATACCTAGGTATAATGGGATCTCGTAGAGACGTTGTGACTGCTGTCTGGAAGACTGGTCTTGAAGGGGTTTGGTATAAGTGCATGAGATGTTTGAGGCAGACATCAGCCTTTGCTTCACCTGGTGCTACTAATGATACTACTCAAAACGAGAGGGAGACTTGGTGGATTAGCCGATGGGCTTATGGATGCCCAATGTGTGGTGGAACATGGGGGATACAGTTGCACGAGTTAGAGGATGAACTGCATTTCACCTTGTTTAGCACTGCCTGTGCCAGCTCTTCTCACCGTAAGGTTGGAGTTTCTCTTGCGTATGGGGAGCTTGACGAGTGCCATTATTATCTTGTTCATAAAAATTCTCAGTACAGTGACCAATAACAAGAAGAATGTCCAGCTTAGAAGGCAAGATATTAGTTAATTTCATGGGAAGTAGATACCTGATTCATTGCCATCAGAGTGGGAGGTGGGGGCAGCGGGGCGTGTAGCTGAGGCAGAGTATTTTAGTTTTGTACATGGTAGACCAGTGTTGTTTCAGAAGAGTCGAGCATGGAGATAGACGATGGAAGCCTTAAGGCCTCCTTAGGCTGCAGTTGTACACGTATAATTGATAATATTAGCGCCACCTGGATGACAGTGGCTTGCATGACTTGTGTAGAAATAGACACTACAAAAAATATGAATTTTTGCATAGATTATTTGAACAGAACAGTACGACTCCATTTACTTGCTACCCTCATGATTCATGAGAAAGATGACATCCCTCATTAAAAGCTTGTAGTATGCAGGCTTTGGCGTAATTTTTTCTAATGTAATTTGTTAATTATTTAACT

Coding sequence (CDS)

ATGAGTCAAGTTTCCAACGCTACGGAAGGGGAGGAAGAACCCCTGGTTCAGCCTTTGGAGCTTCCCAAAGGGTCTGACAAAACTGAAGTTGTGGCTGTTGAGGAGGAGGTTATGGAGAAACCCGAAGATCCAATGGACGAGGACTTGATCAGTCCGGCTACTGTTTTTCGAATCAAGCTCAAGCAGCCAAGATCCAATTTGCAGTACAAAATGAGTGTTCCTGAGCTCTGTCGCAATTTTAGTGCTGTTGCTTGGTGTGGTAAGCTGAATGCTATTGCCTGTGCATCGGAGACATGTGCAAGAATTCCAAGTTCCAATGCAAACCCACCATTTTGGATCCCCATTCATATTGTGATTCCTGAGCGACCAACCGAGTGTGCCGTGTTTAATGTCATTGCAGATTCTCCACGTGATTCGGTACAATTTATTGAATGGTCACCAACTTCCTGTCCACGTGCTTTGCTTATAGCTAATTTCCATGGGAGGTCAACTATCTGGACTCAGCCATCTCGAGGTCCAGCTAACCTTGTACGTGATGCTAGCTGCTGGCAGCTTGAGCATGAATGGCGACAAGATATTGCAGTTGTTACGAAGTGGCTGTCAGGGTTGTCTGCATATAGGTGGCTTTCAGCAAAATCTAGCTCATCAAACTCCAAGCCAAATTTTGAGGAAAAGTTTCTTCCACAGCAGTCGCAAACGTCAGCTAGGTGGCCAAATTTTCTTTGCGTTTGCTCGGTTTTCTCTTCAGGCTCTGTTCAACTTCATTGGTCCCAGTGGCCTTCTAGTCAAAATAGCTCACCATCAAAATGGTTCTGCACAAGTAAAGGACTATTGGGCGCTGGACCAAGTGGGATCATGGCTGCTGATGCCATCATAACAGATAGTGGTGCCATGCACGTGGCAGGGGTTCCAATTGTAAATCCATCCACTGTTGTTGTCTGGGAGGTTACTCCTGGCCCTGGAAATGGTTTTCAAGCCACTCCGAAGACAAGCACGAGCAATGGGGTCCCTGCTCCACTCAGTCCTCCTAATTGGTCTGGTTTTGCCCCATTGGCTGCATACCTGTTTAGCTGGCAAGAATTTTTATTATCTGAGTTAAAGCAAGGAAAAAATAAGACGCAAGATGTTAATGATAGTATTCCACTTCATTGTTCACCAGTTTCTAATTTTTCTGCATATGTCTCTCCTGAGGCTGCAGCTCAGTCTGCCACAACTACTACGTGGGGTTCTGGAGTTACTGCTGTTGCCTTTGATCCAACTCAGGGTGGCTCTGTTATAGCTATTGTAATAGTCGAGGGACAATACATGTCTCCTTATGATCCTGATGAAGGTCCTTCAATTTCTGGGTGGAGAGTGCAACGCTGGGAATCTTCACTTCAGCCTGTTGTTCTACATCAAATTTTTGGAAGTCCCACTGCCAGCTTTGGTGGTCAGGCACCCATGCAAACAGTTTGGTTATCTAAAGTGGACATGAGTATTTCACCAACTAGTGATTTTAAATCTAATCAATCAACAGCATCAGGACCAAACTCTGATCTACAGAAGTTGTCTGGAGCTTATGTTGATAAGGCAAAAAGAGTTTGTTTTGATCCATTTGATCTTCCCAGTGATGTTAGAACACTTGCTCGAATAGTGTATTCTGCTCATGGTGGCGAAATTGCTGTTGCTTTTCTCTGTGGTGGGGTGCATATTTTCTCTGGTCCAAACTTCGCTCCTGTTGAGAACTACCAGATCAATGTTGGACCAGCCATTGCGGCCCCTGCCTTTTCTTCCACTAGCTGCTGTTCAGCGTCTGTTTGGCATGAAGTGAATAAGGACTACACCATGTTGAAGATCATTCGTGTTCTTCCTCCTGCAGCTCCTAACAATCAGCTGAAGGCAAACTCTTCAACTTGGGAGCGTGCAGTTGCTGAAAGATTTTGGTGGAGCCTTCTTGTCGGTGTTGATTGGTGGGATGCTGTTGCCTGTACGCAGAGTGCTGCTGAAGATGGCATTGTTTCTCCAAATAGCGTCATAGCAGTGTTGGATGCTGATTTTCATTCACTTCCTTCTAGCCAGCACAGGCAGCAGTATGGTCCTAGCTTGGACAGGATAAAATGTAGATTACTGGAAGGCACTAATGCCCAAGAAGTCAGGGCAATGGTTTTAGATATGCAAGCAAGATTGTTGCTGGATATGCTGGGCAAAGGAATTGAATCTGCTTTAATAAACCCGTCTGCTTTACTATCTGAGCCATGGCATGCATCCGGTGAAACATTATCCGGCATTGATCCTGAAGCAATGGCGGTAGAACCAGCACTGATCCCTAGCATTCAGGGTTGCAAAGTGATGCAGGCTTACGTTGATGCTGTCCTTGATCTTGCTTCACATTTCATTACACGTTTGCGACGTTATGCTAGTTTCTGTCGCACTTTGGCAAGTCATGCTGTTACAGCTGGAACTGGTAGCAACCGAAATATGGTAACTAGTCCTACCCAGAGTTCTGCATCTCCTGCGACAAGCCAGAGTGCTCAAAGCGGTACAACAAGTTCAGGAAGTACCCAGATGCAAGCTTGGGTACAAGGTGCGATTGCCAAAATTAGTAGCACAACTGATGGAGTAGCCAGTTCAACTCCAAACCCCATTAGTGGTTCATCTACCTTTATGCCAATAAGCATAAATACTGGAACTTTTCCTGGAACCCCAGCTGTTCGGCTTATTGGGGATTGCCATTTTTTACATAGATTATGCCAACTTTTGCTCTTCTGTTTTTTCTTTCGCCGAACACAGCTTCCCCGTTATATTAGTAATTCACAAAAAAATGCTGATGCAAACATCCAAAAGCCTCAACCCGCTGTTCCTGGGAAAGTGGAGGAGATTAGCTCCAATTCTGTCAAGCCAGTGCCAAATATAATTAAGCCTGAGGAAAGTCAAATAGCTCGAGCTGTTCCGCTTGTAACTGGAGCTAAAGGAGCTGAAGAAGGGCTTGCTGGTAGGTCAAGAATCGGTACAGGCAATGCTGGTCAAGGATATACTTCTGAGGAGGTGAAAGTCCTTTTCCTCATACTTATAGATCTTTGCCGCCGTACTGCTAGTCTTCCACATCCATTACCAGTCTCCCAGGTTGGGAGTAGTAATATCCAAGTGCGTCTGCATTATATTGACGGCAACTATACTGTATTACCTGAAGTTGTGGAAGCATCCCTTGGTCCACATATGCAGAATATGCCCCGGCCTAGAGGTGCAGATGCTGCTGGTCTGTTGCTTCGGGAATTAGAACTTCACCCTCCAGCTGAAGAATGGCACAGGCGGAATATGTATGGTGGGCCTTGGTCTGATGTAGATGATTTGGGATCCACAGACGATAATTCCAAGCTTAGTAATTCGTCAGACCCACTTGATCTCAACTCATTGGAAAATTGCAATGTTTATTATGGAGCTAATGGTTTGTGGCCTAGAAAGCGCAGGATGTCTGAAAGAGATGCTGCTTTTGGCTTGAATACGTCCATTGGTCTCGGAGCATACCTAGGTATAATGGGATCTCGTAGAGACGTTGTGACTGCTGTCTGGAAGACTGGTCTTGAAGGGGTTTGGTATAAGTGCATGAGATGTTTGAGGCAGACATCAGCCTTTGCTTCACCTGGTGCTACTAATGATACTACTCAAAACGAGAGGGAGACTTGGTGGATTAGCCGATGGGCTTATGGATGCCCAATGTGTGGTGGAACATGGGGGATACAGTTGCACGAGTTAGAGGATGAACTGCATTTCACCTTGTTTAGCACTGCCTGTGCCAGCTCTTCTCACCGTAAGGTTGGAGTTTCTCTTGCGTATGGGGAGCTTGACGAGTGCCATTATTATCTTGTTCATAAAAATTCTCAGTACAGTGACCAATAA

Protein sequence

MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKLKQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQEFLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPTQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAPMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRTLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVWHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQSAAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSSASPATSQSAQSGTTSSGSTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKPVPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTWGIQLHELEDELHFTLFSTACASSSHRKVGVSLAYGELDECHYYLVHKNSQYSDQ

Homology

[Close]

BLAST of Carg21491 vs. NCBI nr
Match: XP_023519315.1 (mediator of RNA polymerase II transcription subunit 16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2437.5 bits (6316), Expect = 0.0e+00
Identity = 1227/1237 (99.19%), Postives = 1229/1237 (99.35%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL
Sbjct: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT 420
            FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT
Sbjct: 361  FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT 420

Query: 421  QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP 480
            QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP
Sbjct: 421  QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP 480

Query: 481  MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT 540
            MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT
Sbjct: 481  MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT 540

Query: 541  LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW 600
            LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW
Sbjct: 541  LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW 600

Query: 601  HEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQSA 660
            HEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERA+AERFWWSLLVGVDWWDAVACTQSA
Sbjct: 601  HEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAIAERFWWSLLVGVDWWDAVACTQSA 660

Query: 661  AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA 720
            AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA
Sbjct: 661  AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA 720

Query: 721  RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQAY 780
            RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QAY
Sbjct: 721  RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QAY 780

Query: 781  VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSXXXXXXXXXXXXX 840
            VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQ XXXXXXXXXXXXX
Sbjct: 781  VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQXXXXXXXXXXXXXX 840

Query: 841  XXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLI 900
            XXXXXX QMQAWVQGAIAKISSTTDGV+SSTPNPISGSSTFMPISINTGTFPGTPAVRLI
Sbjct: 841  XXXXXXXQMQAWVQGAIAKISSTTDGVSSSTPNPISGSSTFMPISINTGTFPGTPAVRLI 900

Query: 901  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP 960
            GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP
Sbjct: 901  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP 960

Query: 961  VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1020
            VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC
Sbjct: 961  VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1020

Query: 1021 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1080
            RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL
Sbjct: 1021 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1080

Query: 1081 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1140
            LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA
Sbjct: 1081 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1140

Query: 1141 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1200
            NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ
Sbjct: 1141 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1200

Query: 1201 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1231

[Close]

BLAST of Carg21491 vs. NCBI nr
Match: XP_022927009.1 (mediator of RNA polymerase II transcription subunit 16 [Cucurbita moschata])

HSP 1 Score: 2435.2 bits (6310), Expect = 0.0e+00
Identity = 1225/1237 (99.03%), Postives = 1230/1237 (99.43%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEE+VMEKPEDPMDEDLISPATVFRIKL
Sbjct: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEQVMEKPEDPMDEDLISPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSVFSSGSVQLHWSQWPSS NSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVFSSGSVQLHWSQWPSSLNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT 420
            FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT
Sbjct: 361  FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT 420

Query: 421  QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP 480
            QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP
Sbjct: 421  QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP 480

Query: 481  MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT 540
            MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT
Sbjct: 481  MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT 540

Query: 541  LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW 600
            LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW
Sbjct: 541  LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW 600

Query: 601  HEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQSA 660
            HEVNKDYTMLKIIRVLPPA+PNNQLKANSSTWERA+AERFWWSLLVGVDWWDAVACTQSA
Sbjct: 601  HEVNKDYTMLKIIRVLPPASPNNQLKANSSTWERAIAERFWWSLLVGVDWWDAVACTQSA 660

Query: 661  AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA 720
            AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA
Sbjct: 661  AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA 720

Query: 721  RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQAY 780
            RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QAY
Sbjct: 721  RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QAY 780

Query: 781  VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSXXXXXXXXXXXXX 840
            VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSXXXXXXXXXXXXX
Sbjct: 781  VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSXXXXXXXXXXXXX 840

Query: 841  XXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLI 900
            XXXXXXTQMQAWVQGAIAKISSTTDGV+SS+PNPISGSSTFMPISINTGTFPGTPAVRLI
Sbjct: 841  XXXXXXTQMQAWVQGAIAKISSTTDGVSSSSPNPISGSSTFMPISINTGTFPGTPAVRLI 900

Query: 901  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP 960
            GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP
Sbjct: 901  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP 960

Query: 961  VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1020
            VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC
Sbjct: 961  VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1020

Query: 1021 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1080
            RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL
Sbjct: 1021 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1080

Query: 1081 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1140
            LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA
Sbjct: 1081 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1140

Query: 1141 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1200
            NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ
Sbjct: 1141 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1200

Query: 1201 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1231

[Close]

BLAST of Carg21491 vs. NCBI nr
Match: XP_023001689.1 (mediator of RNA polymerase II transcription subunit 16 [Cucurbita maxima])

HSP 1 Score: 2427.1 bits (6289), Expect = 0.0e+00
Identity = 1221/1237 (98.71%), Postives = 1226/1237 (99.11%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL
Sbjct: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSV+SSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVYSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKTS+SNGVPAPLSPPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSSSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT 420
            FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT
Sbjct: 361  FLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPT 420

Query: 421  QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP 480
            QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP
Sbjct: 421  QGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAP 480

Query: 481  MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT 540
            MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT
Sbjct: 481  MQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRT 540

Query: 541  LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW 600
            LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW
Sbjct: 541  LARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVW 600

Query: 601  HEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQSA 660
            HEVNKDYTMLKIIRVLPPAAPNNQLKAN STWERA+AERFWWSLLVGVDWWDAVACTQSA
Sbjct: 601  HEVNKDYTMLKIIRVLPPAAPNNQLKANPSTWERAIAERFWWSLLVGVDWWDAVACTQSA 660

Query: 661  AEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA 720
            AEDGIVSPNSVIAVLDADFHSL SSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA
Sbjct: 661  AEDGIVSPNSVIAVLDADFHSLSSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQA 720

Query: 721  RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQAY 780
            RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QAY
Sbjct: 721  RLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QAY 780

Query: 781  VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSXXXXXXXXXXXXX 840
            VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQ XXXXXXXXXXXXX
Sbjct: 781  VDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQXXXXXXXXXXXXXX 840

Query: 841  XXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLI 900
            XXXXXX QMQAWVQGAIAKISSTTDGV+SSTPNPISGSSTFMPISINTGTFPGTPAVRLI
Sbjct: 841  XXXXXXXQMQAWVQGAIAKISSTTDGVSSSTPNPISGSSTFMPISINTGTFPGTPAVRLI 900

Query: 901  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP 960
            GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQP VPGKVEEISSNSVKP
Sbjct: 901  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPTVPGKVEEISSNSVKP 960

Query: 961  VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1020
            VPNIIKPEESQI+RAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC
Sbjct: 961  VPNIIKPEESQISRAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1020

Query: 1021 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1080
            RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL
Sbjct: 1021 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1080

Query: 1081 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1140
            LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA
Sbjct: 1081 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1140

Query: 1141 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1200
            NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ
Sbjct: 1141 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1200

Query: 1201 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1231

[Close]

BLAST of Carg21491 vs. NCBI nr
Match: XP_008442342.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 16 [Cucumis melo])

HSP 1 Score: 2337.4 bits (6056), Expect = 0.0e+00
Identity = 1170/1239 (94.43%), Postives = 1200/1239 (96.85%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            M+QVSNATEGEE+P VQPLELPK SDKTE +  +EEVMEKP+D MDEDL++PATVFRIKL
Sbjct: 1    MTQVSNATEGEEQPQVQPLELPKVSDKTEPLPAQEEVMEKPDDSMDEDLVTPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQ+KMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR+TIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRTTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLS+KS+SSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSSKSNSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSVFSSGSVQLHWSQWP SQNSSP KWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKT+TSNGVPAPLSPPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTNTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420
            FLLSELKQGK +T QDVND+IPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP
Sbjct: 361  FLLSELKQGKKQTDQDVNDTIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420

Query: 421  TQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQA 480
            T+GGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASF GQA
Sbjct: 421  TRGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFSGQA 480

Query: 481  PMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVR 540
            P QTVWLSKVD SISPTSDFKSNQS  SGPNSDL+KLSGAY+DKAK+VCFDPFDLPSDVR
Sbjct: 481  PTQTVWLSKVDTSISPTSDFKSNQSAVSGPNSDLRKLSGAYIDKAKKVCFDPFDLPSDVR 540

Query: 541  TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600
            TLARIVYSAHGGEIAVAFLCGGVH+FSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV
Sbjct: 541  TLARIVYSAHGGEIAVAFLCGGVHVFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600

Query: 601  WHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQS 660
            WH+VNKD TML+IIRVLPPAAP+NQLKANSSTWERA+AERFWWSLLVGVDWWDAV CTQS
Sbjct: 601  WHDVNKDCTMLRIIRVLPPAAPSNQLKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQS 660

Query: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720
            AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ
Sbjct: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720

Query: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQA 780
            ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QA
Sbjct: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QA 780

Query: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPT-QSXXXXXXXXXXX 840
            YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRN+V SPT  S   XXXXXXXX
Sbjct: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNIVASPTPSSASPXXXXXXXX 840

Query: 841  XXXXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVR 900
            XXXXXXXX  MQAWVQGAIAKISSTTDGV SSTPNPISGSSTFMPISINTGTFPGTPAVR
Sbjct: 841  XXXXXXXXXXMQAWVQGAIAKISSTTDGVTSSTPNPISGSSTFMPISINTGTFPGTPAVR 900

Query: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSV 960
            LIGDCHFLHRLCQLLLFCFFFRRTQLPRYI NSQ+NADANIQKPQPAVPGKVEEI+SNSV
Sbjct: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLPRYIGNSQRNADANIQKPQPAVPGKVEEINSNSV 960

Query: 961  KPVPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020
            KPV NI+KP+ESQI RA  LVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID
Sbjct: 961  KPVQNIVKPDESQIVRASQLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020

Query: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080
            LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA
Sbjct: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080

Query: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYY 1140
            GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLG  DD+SKLSNSSDPLDLNSLENCNVYY
Sbjct: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGPNDDSSKLSNSSDPLDLNSLENCNVYY 1140

Query: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200
            GANGLWPRKRRMSERDAAFGLNTSIGLGA+LGIMGSRRDVVTAVWKTGLEGVWYKCMRCL
Sbjct: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAFLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200

Query: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1233

[Close]

BLAST of Carg21491 vs. NCBI nr
Match: XP_011653115.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 16 [Cucumis sativus] >KGN64664.1 hypothetical protein Csa_1G073710 [Cucumis sativus])

HSP 1 Score: 2326.6 bits (6028), Expect = 0.0e+00
Identity = 1166/1239 (94.11%), Postives = 1197/1239 (96.61%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            M+QVSNATEGEE+P VQPLELPK SDKTE +  +EEVMEKP+D MDEDL++PATVFRIKL
Sbjct: 1    MTQVSNATEGEEQPQVQPLELPKVSDKTEPLPAQEEVMEKPDDAMDEDLVTPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQ+KMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR+TIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRTTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLS+KS+SSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSSKSNSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSVFSSGSVQLHWSQWP SQNSSP KWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKT+T+NGVPAPL+PPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTTTNNGVPAPLNPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420
            FLLSELKQGK +T QDVND+IPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP
Sbjct: 361  FLLSELKQGKKQTDQDVNDTIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420

Query: 421  TQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQA 480
            T+GGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFG+PTASF GQA
Sbjct: 421  TRGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGNPTASFSGQA 480

Query: 481  PMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVR 540
            P QTVWLSKVD SISPTSDFKSNQS  SGPNSDL+KLSGAY+DKAK+VCFDPFDLPSDVR
Sbjct: 481  PTQTVWLSKVDTSISPTSDFKSNQSAVSGPNSDLRKLSGAYIDKAKKVCFDPFDLPSDVR 540

Query: 541  TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600
            TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV
Sbjct: 541  TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600

Query: 601  WHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQS 660
            WH+VNKD TML+IIRVLPPAAP+NQLKANSSTWERA+AERFWWSLLVGVDWWDAV CTQS
Sbjct: 601  WHDVNKDCTMLRIIRVLPPAAPSNQLKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQS 660

Query: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720
            AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ
Sbjct: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720

Query: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQA 780
            ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QA
Sbjct: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QA 780

Query: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPT-QSXXXXXXXXXXX 840
            YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRN+V SPT  S   XXXXXXXX
Sbjct: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNIVASPTPSSASPXXXXXXXX 840

Query: 841  XXXXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVR 900
            XXXXXXXX  MQAWVQGAIAKISSTTDGV SSTPNPISGSSTFMPISINTGTFPGTPAVR
Sbjct: 841  XXXXXXXXXXMQAWVQGAIAKISSTTDGVTSSTPNPISGSSTFMPISINTGTFPGTPAVR 900

Query: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSV 960
            LIGDCHFLHRLCQLLLFCFFFRRTQL RYI  SQ+NADAN QKPQP+VPGKVEEI+SNSV
Sbjct: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLSRYIGISQRNADANSQKPQPSVPGKVEEINSNSV 960

Query: 961  KPVPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020
            KPV NIIKP+ESQI RA  LVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID
Sbjct: 961  KPVQNIIKPDESQIVRASQLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020

Query: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080
            LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA
Sbjct: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080

Query: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYY 1140
            GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLG  DDNSKLSNSSDPLDLNSLENCNVYY
Sbjct: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGPNDDNSKLSNSSDPLDLNSLENCNVYY 1140

Query: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200
            GANGLWPRKRRMSERDAAFGLNTSIGLGA+LGIMGSRRDVVTAVWKTGLEGVWYKCMRCL
Sbjct: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAFLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200

Query: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1233

[Close]

BLAST of Carg21491 vs. TAIR10
Match: AT4G04920.1 (sensitive to freezing 6)

HSP 1 Score: 1840.1 bits (4765), Expect = 0.0e+00
Identity = 918/1213 (75.68%), Postives = 1016/1213 (83.76%), Query Frame = 0


Query: 45   MDEDLISPATVFRIKLKQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPS 104
            M+ D +SPATVF +KLKQP SNL +KMSVPELCRNFSAVAWCGKLNAIACASETCARIPS
Sbjct: 77   MEIDPVSPATVFCVKLKQPNSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPS 136

Query: 105  SNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRST 164
            S AN PFWIPIHI+IPERPTECAVFNV+ADSPRDSVQFIEWSPTSCPRALLIANFHGR T
Sbjct: 137  SKANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIANFHGRIT 196

Query: 165  IWTQPSRGPANLVRDASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAK-SSSSNSKPNFE 224
            IWTQP++G ANLV DA+ WQ EHEWRQDIAVVTKWL+G S YRWLS+K SS +N+K  FE
Sbjct: 197  IWTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGASPYRWLSSKPSSGTNAKSTFE 256

Query: 225  EKFLPQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPS 284
            EKFL Q S++SARWPNFLCVCSVFSSGSVQ+HWSQWPS+Q S+  KWF T KGLLGAGPS
Sbjct: 257  EKFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAPKWFSTKKGLLGAGPS 316

Query: 285  GIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPP 344
            GIMAADAIITDSGAMHVAGVPIVNPST+VVWEVTPGPGNG QATPK ST + VP  LS  
Sbjct: 317  GIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPSLSSS 376

Query: 345  NWSGFAPLAAYLFSWQEFLLSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQS 404
            +W+GFAPLAAYLFSWQE+L+SE+KQGK  + QD +D+I L CSPVSNFSAYVSPEAAAQS
Sbjct: 377  SWTGFAPLAAYLFSWQEYLISEIKQGKKPSDQDSSDAISLSCSPVSNFSAYVSPEAAAQS 436

Query: 405  ATTTTWGSGVTAVAFDPTQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPV 464
            A TTTWGSGVTAVAFDPT+GGSVIA+VIVEGQYMSPYDPDEGPSI+GWRVQRWESS+QPV
Sbjct: 437  AATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPV 496

Query: 465  VLHQIFGSPTASFGGQAPMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVD 524
            VLHQIFG+PT++FGGQ P QTVW+S+VDMSI PT DFK++Q  A+GP+ D  K   +  +
Sbjct: 497  VLHQIFGNPTSNFGGQVPTQTVWVSRVDMSIPPTKDFKNHQVAAAGPSVDAPKEPDSGDE 556

Query: 525  KAKRVCFDPFDLPSDVRTLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGP 584
            KA +V FDPFDLPSD+RTLARIVYSAHGGEIA+AFL GGVHIFSGP F+PVENYQINVG 
Sbjct: 557  KANKVVFDPFDLPSDIRTLARIVYSAHGGEIAIAFLRGGVHIFSGPTFSPVENYQINVGS 616

Query: 585  AIAAPAFSSTSCCSASVWHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWW 644
            AIAAPAFS TSCCSASVWH+  KD  MLKIIRVLPPA P NQ K + STWERA+AERFWW
Sbjct: 617  AIAAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQSTWERAIAERFWW 676

Query: 645  SLLVGVDWWDAVACTQSAAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRL 704
            SLLVGVDWWDAV CTQSAAEDGIVS NSVIAV+DADFHSLPS+QHRQQYGP+LDRIKCRL
Sbjct: 677  SLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVMDADFHSLPSTQHRQQYGPNLDRIKCRL 736

Query: 705  LEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMA 764
            LEGTNAQEVRAMVLDMQARLLLDMLGKGIESAL+NPSAL+ EPW   GET++GI+PEAMA
Sbjct: 737  LEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVFEPWRVDGETITGINPEAMA 796

Query: 765  VEPALIPSIQGCKVMQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVT 824
            V+PAL+ SI      QAYVDAVLDLASHFITRLRRYASFCRTLASHA +AGTGSNRN VT
Sbjct: 797  VDPALVSSI------QAYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVT 856

Query: 825  SPTQSXXXXXXXXXXXXXXXXXXXTQ------------------MQAWVQGAIAKISSTT 884
            SPTQ+                    Q                  +QAW+QGAIAKISS+ 
Sbjct: 857  SPTQNASSPATPQVFPDKSLYLAVGQPXXXXXXXXXXXXXXXXHVQAWMQGAIAKISSSN 916

Query: 885  DGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQL 944
            DG ++ST +PISGS TFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCF  R ++ 
Sbjct: 917  DG-SNSTASPISGSPTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFLQRSSRF 976

Query: 945  PRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKPVPNIIKPEESQIARAVPLVTGAKG 1004
            P      Q+NAD + QK Q     K+EE+  NS KP P + + E++Q  R   L TG KG
Sbjct: 977  P------QRNADVSSQKLQTGATSKLEEV--NSAKPTPALNRIEDAQGFRGAQLGTGVKG 1036

Query: 1005 AEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLCRRTASLPHPLPVSQVGSSNIQVRL 1064
             +E  A  +++G+GNAGQGYT EEV+VLF IL+DLC+RT+ L HPLP SQVGS NIQVRL
Sbjct: 1037 IDENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQVGSGNIQVRL 1096

Query: 1065 HYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPW 1124
            HYIDGNYTVLPEVVEA+LGPHMQNMPRPRGADAAGLLLRELELHPP+EEWHRRN++GGP 
Sbjct: 1097 HYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNLFGGPG 1156

Query: 1125 SDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDAAFGLNTSIG 1184
            S+ +D+  TDD SKLSNS D  D N    C+ Y   + LWPRKRRMSERDAAFG NTS+G
Sbjct: 1157 SEPEDMILTDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPRKRRMSERDAAFGSNTSVG 1216

Query: 1185 LGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWIS 1238
            LGAYLGIMGSRRDVVTA WKTGLEGVWYKC+RCLRQTSAFASPGAT     NERETWW S
Sbjct: 1217 LGAYLGIMGSRRDVVTATWKTGLEGVWYKCIRCLRQTSAFASPGATKQPNPNERETWWTS 1274

[Close]

BLAST of Carg21491 vs. Swiss-Prot
Match: sp|F4JGZ1|MED16_ARATH (Mediator of RNA polymerase II transcription subunit 16 OS=Arabidopsis thaliana OX=3702 GN=MED16 PE=1 SV=1)

HSP 1 Score: 1840.1 bits (4765), Expect = 0.0e+00
Identity = 918/1213 (75.68%), Postives = 1016/1213 (83.76%), Query Frame = 0


Query: 45   MDEDLISPATVFRIKLKQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPS 104
            M+ D +SPATVF +KLKQP SNL +KMSVPELCRNFSAVAWCGKLNAIACASETCARIPS
Sbjct: 77   MEIDPVSPATVFCVKLKQPNSNLLHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPS 136

Query: 105  SNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRST 164
            S AN PFWIPIHI+IPERPTECAVFNV+ADSPRDSVQFIEWSPTSCPRALLIANFHGR T
Sbjct: 137  SKANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIANFHGRIT 196

Query: 165  IWTQPSRGPANLVRDASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAK-SSSSNSKPNFE 224
            IWTQP++G ANLV DA+ WQ EHEWRQDIAVVTKWL+G S YRWLS+K SS +N+K  FE
Sbjct: 197  IWTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGASPYRWLSSKPSSGTNAKSTFE 256

Query: 225  EKFLPQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPS 284
            EKFL Q S++SARWPNFLCVCSVFSSGSVQ+HWSQWPS+Q S+  KWF T KGLLGAGPS
Sbjct: 257  EKFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAPKWFSTKKGLLGAGPS 316

Query: 285  GIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPP 344
            GIMAADAIITDSGAMHVAGVPIVNPST+VVWEVTPGPGNG QATPK ST + VP  LS  
Sbjct: 317  GIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPSLSSS 376

Query: 345  NWSGFAPLAAYLFSWQEFLLSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQS 404
            +W+GFAPLAAYLFSWQE+L+SE+KQGK  + QD +D+I L CSPVSNFSAYVSPEAAAQS
Sbjct: 377  SWTGFAPLAAYLFSWQEYLISEIKQGKKPSDQDSSDAISLSCSPVSNFSAYVSPEAAAQS 436

Query: 405  ATTTTWGSGVTAVAFDPTQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPV 464
            A TTTWGSGVTAVAFDPT+GGSVIA+VIVEGQYMSPYDPDEGPSI+GWRVQRWESS+QPV
Sbjct: 437  AATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPV 496

Query: 465  VLHQIFGSPTASFGGQAPMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVD 524
            VLHQIFG+PT++FGGQ P QTVW+S+VDMSI PT DFK++Q  A+GP+ D  K   +  +
Sbjct: 497  VLHQIFGNPTSNFGGQVPTQTVWVSRVDMSIPPTKDFKNHQVAAAGPSVDAPKEPDSGDE 556

Query: 525  KAKRVCFDPFDLPSDVRTLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGP 584
            KA +V FDPFDLPSD+RTLARIVYSAHGGEIA+AFL GGVHIFSGP F+PVENYQINVG 
Sbjct: 557  KANKVVFDPFDLPSDIRTLARIVYSAHGGEIAIAFLRGGVHIFSGPTFSPVENYQINVGS 616

Query: 585  AIAAPAFSSTSCCSASVWHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWW 644
            AIAAPAFS TSCCSASVWH+  KD  MLKIIRVLPPA P NQ K + STWERA+AERFWW
Sbjct: 617  AIAAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQSTWERAIAERFWW 676

Query: 645  SLLVGVDWWDAVACTQSAAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRL 704
            SLLVGVDWWDAV CTQSAAEDGIVS NSVIAV+DADFHSLPS+QHRQQYGP+LDRIKCRL
Sbjct: 677  SLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVMDADFHSLPSTQHRQQYGPNLDRIKCRL 736

Query: 705  LEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMA 764
            LEGTNAQEVRAMVLDMQARLLLDMLGKGIESAL+NPSAL+ EPW   GET++GI+PEAMA
Sbjct: 737  LEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVFEPWRVDGETITGINPEAMA 796

Query: 765  VEPALIPSIQGCKVMQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVT 824
            V+PAL+ SI      QAYVDAVLDLASHFITRLRRYASFCRTLASHA +AGTGSNRN VT
Sbjct: 797  VDPALVSSI------QAYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVT 856

Query: 825  SPTQSXXXXXXXXXXXXXXXXXXXTQ------------------MQAWVQGAIAKISSTT 884
            SPTQ+                    Q                  +QAW+QGAIAKISS+ 
Sbjct: 857  SPTQNASSPATPQVFPDKSLYLAVGQPXXXXXXXXXXXXXXXXHVQAWMQGAIAKISSSN 916

Query: 885  DGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQL 944
            DG ++ST +PISGS TFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCF  R ++ 
Sbjct: 917  DG-SNSTASPISGSPTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFLQRSSRF 976

Query: 945  PRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKPVPNIIKPEESQIARAVPLVTGAKG 1004
            P      Q+NAD + QK Q     K+EE+  NS KP P + + E++Q  R   L TG KG
Sbjct: 977  P------QRNADVSSQKLQTGATSKLEEV--NSAKPTPALNRIEDAQGFRGAQLGTGVKG 1036

Query: 1005 AEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLCRRTASLPHPLPVSQVGSSNIQVRL 1064
             +E  A  +++G+GNAGQGYT EEV+VLF IL+DLC+RT+ L HPLP SQVGS NIQVRL
Sbjct: 1037 IDENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQVGSGNIQVRL 1096

Query: 1065 HYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPW 1124
            HYIDGNYTVLPEVVEA+LGPHMQNMPRPRGADAAGLLLRELELHPP+EEWHRRN++GGP 
Sbjct: 1097 HYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNLFGGPG 1156

Query: 1125 SDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDAAFGLNTSIG 1184
            S+ +D+  TDD SKLSNS D  D N    C+ Y   + LWPRKRRMSERDAAFG NTS+G
Sbjct: 1157 SEPEDMILTDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPRKRRMSERDAAFGSNTSVG 1216

Query: 1185 LGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWIS 1238
            LGAYLGIMGSRRDVVTA WKTGLEGVWYKC+RCLRQTSAFASPGAT     NERETWW S
Sbjct: 1217 LGAYLGIMGSRRDVVTATWKTGLEGVWYKCIRCLRQTSAFASPGATKQPNPNERETWWTS 1274

[Close]

BLAST of Carg21491 vs. TrEMBL
Match: tr|A0A1S3B503|A0A1S3B503_CUCME (mediator of RNA polymerase II transcription subunit 16 OS=Cucumis melo OX=3656 GN=LOC103486239 PE=4 SV=1)

HSP 1 Score: 2337.4 bits (6056), Expect = 0.0e+00
Identity = 1170/1239 (94.43%), Postives = 1200/1239 (96.85%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            M+QVSNATEGEE+P VQPLELPK SDKTE +  +EEVMEKP+D MDEDL++PATVFRIKL
Sbjct: 1    MTQVSNATEGEEQPQVQPLELPKVSDKTEPLPAQEEVMEKPDDSMDEDLVTPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQ+KMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR+TIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRTTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLS+KS+SSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSSKSNSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSVFSSGSVQLHWSQWP SQNSSP KWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKT+TSNGVPAPLSPPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTNTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420
            FLLSELKQGK +T QDVND+IPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP
Sbjct: 361  FLLSELKQGKKQTDQDVNDTIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420

Query: 421  TQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQA 480
            T+GGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASF GQA
Sbjct: 421  TRGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFSGQA 480

Query: 481  PMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVR 540
            P QTVWLSKVD SISPTSDFKSNQS  SGPNSDL+KLSGAY+DKAK+VCFDPFDLPSDVR
Sbjct: 481  PTQTVWLSKVDTSISPTSDFKSNQSAVSGPNSDLRKLSGAYIDKAKKVCFDPFDLPSDVR 540

Query: 541  TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600
            TLARIVYSAHGGEIAVAFLCGGVH+FSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV
Sbjct: 541  TLARIVYSAHGGEIAVAFLCGGVHVFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600

Query: 601  WHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQS 660
            WH+VNKD TML+IIRVLPPAAP+NQLKANSSTWERA+AERFWWSLLVGVDWWDAV CTQS
Sbjct: 601  WHDVNKDCTMLRIIRVLPPAAPSNQLKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQS 660

Query: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720
            AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ
Sbjct: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720

Query: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQA 780
            ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QA
Sbjct: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QA 780

Query: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPT-QSXXXXXXXXXXX 840
            YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRN+V SPT  S   XXXXXXXX
Sbjct: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNIVASPTPSSASPXXXXXXXX 840

Query: 841  XXXXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVR 900
            XXXXXXXX  MQAWVQGAIAKISSTTDGV SSTPNPISGSSTFMPISINTGTFPGTPAVR
Sbjct: 841  XXXXXXXXXXMQAWVQGAIAKISSTTDGVTSSTPNPISGSSTFMPISINTGTFPGTPAVR 900

Query: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSV 960
            LIGDCHFLHRLCQLLLFCFFFRRTQLPRYI NSQ+NADANIQKPQPAVPGKVEEI+SNSV
Sbjct: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLPRYIGNSQRNADANIQKPQPAVPGKVEEINSNSV 960

Query: 961  KPVPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020
            KPV NI+KP+ESQI RA  LVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID
Sbjct: 961  KPVQNIVKPDESQIVRASQLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020

Query: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080
            LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA
Sbjct: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080

Query: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYY 1140
            GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLG  DD+SKLSNSSDPLDLNSLENCNVYY
Sbjct: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGPNDDSSKLSNSSDPLDLNSLENCNVYY 1140

Query: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200
            GANGLWPRKRRMSERDAAFGLNTSIGLGA+LGIMGSRRDVVTAVWKTGLEGVWYKCMRCL
Sbjct: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAFLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200

Query: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1233

[Close]

BLAST of Carg21491 vs. TrEMBL
Match: tr|A0A0A0LUJ6|A0A0A0LUJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073710 PE=4 SV=1)

HSP 1 Score: 2326.6 bits (6028), Expect = 0.0e+00
Identity = 1166/1239 (94.11%), Postives = 1197/1239 (96.61%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLVQPLELPKGSDKTEVVAVEEEVMEKPEDPMDEDLISPATVFRIKL 60
            M+QVSNATEGEE+P VQPLELPK SDKTE +  +EEVMEKP+D MDEDL++PATVFRIKL
Sbjct: 1    MTQVSNATEGEEQPQVQPLELPKVSDKTEPLPAQEEVMEKPDDAMDEDLVTPATVFRIKL 60

Query: 61   KQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120
            KQPRSNLQ+KMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP
Sbjct: 61   KQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIP 120

Query: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDA 180
            ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR+TIWTQPSRGPANLVRDA
Sbjct: 121  ERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRTTIWTQPSRGPANLVRDA 180

Query: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSSNSKPNFEEKFLPQQSQTSARWPNF 240
            SCWQLEHEWRQDIAVVTKWLSGLSAYRWLS+KS+SSNSKPNFEEKFLPQQSQTSARWPNF
Sbjct: 181  SCWQLEHEWRQDIAVVTKWLSGLSAYRWLSSKSNSSNSKPNFEEKFLPQQSQTSARWPNF 240

Query: 241  LCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300
            LCVCSVFSSGSVQLHWSQWP SQNSSP KWFCTSKGLLGAGPSGIMAADAIITDSGAMHV
Sbjct: 241  LCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCTSKGLLGAGPSGIMAADAIITDSGAMHV 300

Query: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQE 360
            AGVPIVNPSTVVVWEVTPGPGNGFQATPKT+T+NGVPAPL+PPNWSGFAPLAAYLFSWQE
Sbjct: 301  AGVPIVNPSTVVVWEVTPGPGNGFQATPKTTTNNGVPAPLNPPNWSGFAPLAAYLFSWQE 360

Query: 361  FLLSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420
            FLLSELKQGK +T QDVND+IPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP
Sbjct: 361  FLLSELKQGKKQTDQDVNDTIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDP 420

Query: 421  TQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQA 480
            T+GGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFG+PTASF GQA
Sbjct: 421  TRGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGNPTASFSGQA 480

Query: 481  PMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVR 540
            P QTVWLSKVD SISPTSDFKSNQS  SGPNSDL+KLSGAY+DKAK+VCFDPFDLPSDVR
Sbjct: 481  PTQTVWLSKVDTSISPTSDFKSNQSAVSGPNSDLRKLSGAYIDKAKKVCFDPFDLPSDVR 540

Query: 541  TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600
            TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV
Sbjct: 541  TLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASV 600

Query: 601  WHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQS 660
            WH+VNKD TML+IIRVLPPAAP+NQLKANSSTWERA+AERFWWSLLVGVDWWDAV CTQS
Sbjct: 601  WHDVNKDCTMLRIIRVLPPAAPSNQLKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQS 660

Query: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720
            AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ
Sbjct: 661  AAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQ 720

Query: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQA 780
            ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI      QA
Sbjct: 721  ARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSI------QA 780

Query: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPT-QSXXXXXXXXXXX 840
            YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRN+V SPT  S   XXXXXXXX
Sbjct: 781  YVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNIVASPTPSSASPXXXXXXXX 840

Query: 841  XXXXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVR 900
            XXXXXXXX  MQAWVQGAIAKISSTTDGV SSTPNPISGSSTFMPISINTGTFPGTPAVR
Sbjct: 841  XXXXXXXXXXMQAWVQGAIAKISSTTDGVTSSTPNPISGSSTFMPISINTGTFPGTPAVR 900

Query: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSV 960
            LIGDCHFLHRLCQLLLFCFFFRRTQL RYI  SQ+NADAN QKPQP+VPGKVEEI+SNSV
Sbjct: 901  LIGDCHFLHRLCQLLLFCFFFRRTQLSRYIGISQRNADANSQKPQPSVPGKVEEINSNSV 960

Query: 961  KPVPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020
            KPV NIIKP+ESQI RA  LVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID
Sbjct: 961  KPVQNIIKPDESQIVRASQLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILID 1020

Query: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080
            LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA
Sbjct: 1021 LCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAA 1080

Query: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYY 1140
            GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLG  DDNSKLSNSSDPLDLNSLENCNVYY
Sbjct: 1081 GLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGPNDDNSKLSNSSDPLDLNSLENCNVYY 1140

Query: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200
            GANGLWPRKRRMSERDAAFGLNTSIGLGA+LGIMGSRRDVVTAVWKTGLEGVWYKCMRCL
Sbjct: 1141 GANGLWPRKRRMSERDAAFGLNTSIGLGAFLGIMGSRRDVVTAVWKTGLEGVWYKCMRCL 1200

Query: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW
Sbjct: 1201 RQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1233

[Close]

BLAST of Carg21491 vs. TrEMBL
Match: tr|A0A2I4EL97|A0A2I4EL97_9ROSI (mediator of RNA polymerase II transcription subunit 16 isoform X1 OS=Juglans regia OX=51240 GN=LOC108990616 PE=4 SV=1)

HSP 1 Score: 2085.1 bits (5401), Expect = 0.0e+00
Identity = 1023/1241 (82.43%), Postives = 1112/1241 (89.61%), Query Frame = 0


Query: 1    MSQVSNATEGEEEPLV-QPLELPKGSDKTEVVA-VEEEVMEKPEDPMDEDLISPATVFRI 60
            MSQ S   E E+EP   + +E+ KG++ TE  A  EE+ +EKP+DPMDED +SPATVF I
Sbjct: 1    MSQDSGPKEAEDEPAASESIEVSKGAEDTEPAASAEEDAVEKPDDPMDEDSVSPATVFCI 60

Query: 61   KLKQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIV 120
            +LKQPRSNLQ+KMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIV
Sbjct: 61   RLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIV 120

Query: 121  IPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVR 180
            IPERPTECAVFNV ADSPRDSVQFIEWSPTSCPRALLIANFHGR TIWTQPS+G A+LVR
Sbjct: 121  IPERPTECAVFNVTADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQPSQGSASLVR 180

Query: 181  DASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSS-NSKPNFEEKFLPQQSQTSARW 240
            DASCWQ EHEWRQDIAVVTKWLSG+S YRWLS+K+ ++ NSK  FEEKFL QQSQTSARW
Sbjct: 181  DASCWQPEHEWRQDIAVVTKWLSGVSQYRWLSSKAGTAVNSKSAFEEKFLSQQSQTSARW 240

Query: 241  PNFLCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGA 300
            PNFLCVCSVFSSGS+QLHWSQWP SQN    KWF TSKGLLGAGPSGIMAADAIITDSGA
Sbjct: 241  PNFLCVCSVFSSGSIQLHWSQWPPSQNGVALKWFSTSKGLLGAGPSGIMAADAIITDSGA 300

Query: 301  MHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFS 360
            MHVAGVPIVNPSTVVVWEVTPGPGN FQATPKTS+SNGVP  L+PP+W+GFAPLAAYLFS
Sbjct: 301  MHVAGVPIVNPSTVVVWEVTPGPGNAFQATPKTSSSNGVPPSLNPPSWAGFAPLAAYLFS 360

Query: 361  WQEFLLSELKQGKNKTQDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAF 420
            WQE+L+SE KQGK   QD+ND++PLHCSPVSNFSAYVSPEAAAQSA TTTWGSGVTAVAF
Sbjct: 361  WQEYLISEAKQGKRTDQDLNDTVPLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAF 420

Query: 421  DPTQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGG 480
            DPT+GGSVIA+VIVEGQYMSPYDPDEGPSI+GWRVQRWESSL+PVVLHQIFG+PT+S+GG
Sbjct: 421  DPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLKPVVLHQIFGNPTSSYGG 480

Query: 481  QAPMQTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSD 540
            QAPMQTVW+SKVD SI PT+DFKS+++ A+GP SD++K S   VDK ++V FDPFDLPSD
Sbjct: 481  QAPMQTVWVSKVDTSIPPTNDFKSHEAAATGPTSDVRKTSDLTVDKGQKVIFDPFDLPSD 540

Query: 541  VRTLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSA 600
            VRTLARIVYSAHGGEIA+AFL GGVHIFSGPNFAPV+NYQINVG AIAAPAFSSTSCCSA
Sbjct: 541  VRTLARIVYSAHGGEIAIAFLRGGVHIFSGPNFAPVDNYQINVGSAIAAPAFSSTSCCSA 600

Query: 601  SVWHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACT 660
            SVWH+ +KD TMLKIIRVLPPA P++Q KANSSTWERA+AERFWWSLLVGVDWWDAV CT
Sbjct: 601  SVWHDTSKDRTMLKIIRVLPPAVPSSQAKANSSTWERAIAERFWWSLLVGVDWWDAVGCT 660

Query: 661  QSAAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLD 720
            QSAAED IVS NSVIAVLDADFHSLPS+QHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLD
Sbjct: 661  QSAAEDSIVSLNSVIAVLDADFHSLPSTQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLD 720

Query: 721  MQARLLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVM 780
            MQARLLLDMLGKGIESAL+NPSAL+ EPWH SGETLSGIDPEAMAVEPAL+ SI      
Sbjct: 721  MQARLLLDMLGKGIESALLNPSALVPEPWHESGETLSGIDPEAMAVEPALVLSI------ 780

Query: 781  QAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQ-SXXXXXXXXX 840
            QAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMV SPTQ S         
Sbjct: 781  QAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVASPTQSSATPATSQGG 840

Query: 841  XXXXXXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPA 900
                      TQMQAWVQGAIAKISST DGV++STPNPISG S+FMPISINTGTFPGTPA
Sbjct: 841  QSGTASSTGSTQMQAWVQGAIAKISSTNDGVSNSTPNPISGPSSFMPISINTGTFPGTPA 900

Query: 901  VRLIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSN 960
            VRLIGDCHFLHRLCQLLLFCFFFRRTQLPR++  +Q+NA+ N+QKPQP+ P K+EEI+S 
Sbjct: 901  VRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFLLGAQRNAETNMQKPQPSAPSKLEEINSI 960

Query: 961  SVKPVPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLIL 1020
            S KP   + + E+ QI+R   L+ GAKG EEG AGRSR+G+GNAGQGYT EEV+VLFLIL
Sbjct: 961  SAKPASAVARSEDGQISRVNQLLPGAKGVEEGPAGRSRLGSGNAGQGYTFEEVRVLFLIL 1020

Query: 1021 IDLCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGAD 1080
            +DLCRRT  L HPLPVSQVGS+NIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGAD
Sbjct: 1021 MDLCRRTVGLAHPLPVSQVGSNNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGAD 1080

Query: 1081 AAGLLLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNV 1140
            AAGLLLRELELHPPAEEWHRRNMYGGPWSD DD+G  DD+ KL NS DP+D NSLEN +V
Sbjct: 1081 AAGLLLRELELHPPAEEWHRRNMYGGPWSDPDDMGHVDDSPKLRNSGDPIDFNSLENSDV 1140

Query: 1141 YYGANGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMR 1200
            YYG + LWPRKRRMSERDAAFGLNTS+GLGAYLGIMGSRRDVVTAVWKTGLEGVWYKC+R
Sbjct: 1141 YYGPHSLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCIR 1200

Query: 1201 CLRQTSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            CLRQTSAFASPGA++   QN+RETWWISRWAYGCPMCGGTW
Sbjct: 1201 CLRQTSAFASPGASHPPNQNDRETWWISRWAYGCPMCGGTW 1235

[Close]

BLAST of Carg21491 vs. TrEMBL
Match: tr|A0A2P5FE95|A0A2P5FE95_9ROSA (Mediator of RNA polymerase II transcription subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_080140 PE=4 SV=1)

HSP 1 Score: 2064.7 bits (5348), Expect = 0.0e+00
Identity = 1011/1206 (83.83%), Postives = 1093/1206 (90.63%), Query Frame = 0


Query: 38   MEKPEDPMDEDLISPATVFRIKLKQPRSNLQYKMSVPELCRNFSAVAWCGKLNAIACASE 97
            +EKP DPM+ED +SPATVF I+LKQPRSNL +KMSVPELCRNFSAVAWCGKLNAIACASE
Sbjct: 48   VEKPHDPMEEDAVSPATVFCIRLKQPRSNLLHKMSVPELCRNFSAVAWCGKLNAIACASE 107

Query: 98   TCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIA 157
            TCARIPSSNANPPFWIPIHIVIPERPTECAVFNV+ADSPRDSVQFIEWSPTSCPRALLIA
Sbjct: 108  TCARIPSSNANPPFWIPIHIVIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIA 167

Query: 158  NFHGRSTIWTQPSRGPANLVRDASCWQLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSS-S 217
            NFHGR TIWTQPS+G AN+VRDA+CWQ EHEWRQDIAVVTKWLSG+S YRWLS+KSSS S
Sbjct: 168  NFHGRITIWTQPSQGSANVVRDATCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSSGS 227

Query: 218  NSKPNFEEKFLPQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKG 277
            NSK  FEEKFL QQSQ SARWPNFLCVCSVFSSGSVQLHWSQWP +QNS+ +KWFCTSKG
Sbjct: 228  NSKSTFEEKFLSQQSQNSARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSASAKWFCTSKG 287

Query: 278  LLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGV 337
            LLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQ TPKTSTSNGV
Sbjct: 288  LLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQTTPKTSTSNGV 347

Query: 338  PAPLSPPNWSGFAPLAAYLFSWQEFLLSELKQGKNKTQ-DVNDSIPLHCSPVSNFSAYVS 397
            P  ++PP+W+GF+PLAAYLFSWQE+L+SE K GK +T  +  D++ LHCSPVSNFSAYVS
Sbjct: 348  PPSINPPSWAGFSPLAAYLFSWQEYLISEAKSGKKQTDLEFGDTVQLHCSPVSNFSAYVS 407

Query: 398  PEAAAQSATTTTWGSGVTAVAFDPTQGGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRW 457
            PEAAAQSATTTTWGSGVTAVAFDPT+GGSVIA+VIVEGQYMSPYDPDEGPSI+GWRVQRW
Sbjct: 408  PEAAAQSATTTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRW 467

Query: 458  ESSLQPVVLHQIFGSPTASFGGQAPMQTVWLSKVDMSISPTSDFKSNQSTA---SGPNSD 517
            ESS+QPVVLHQIFG+PT+SFGGQAPMQTVW+SKVD SI PT+DFKS+Q+TA   +GP SD
Sbjct: 468  ESSVQPVVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIQPTNDFKSHQTTATGVTGPTSD 527

Query: 518  LQKLSGAYVDKAKRVCFDPFDLPSDVRTLARIVYSAHGGEIAVAFLCGGVHIFSGPNFAP 577
            ++K S + V+KAKRV FDPFDLPSDVRTLARIVYSAHGGEIAVAFL GGVHIFSGPNFAP
Sbjct: 528  VRKASDSIVEKAKRVNFDPFDLPSDVRTLARIVYSAHGGEIAVAFLRGGVHIFSGPNFAP 587

Query: 578  VENYQINVGPAIAAPAFSSTSCCSASVWHEVNKDYTMLKIIRVLPPAAPNNQLKANSSTW 637
            V+NYQINVG AIAAPAFSSTSCCSASVWH+ +KD T+LKIIRVLPPA P +Q KANSS W
Sbjct: 588  VDNYQINVGSAIAAPAFSSTSCCSASVWHDTSKDRTILKIIRVLPPAVPGSQDKANSSAW 647

Query: 638  ERAVAERFWWSLLVGVDWWDAVACTQSAAEDGIVSPNSVIAVLDADFHSLPSSQHRQQYG 697
            ERA+AERFWWSL+VGVDWWDAV CTQSAAEDGIVS NSVIAVLDADFHSLPS+QHRQQYG
Sbjct: 648  ERAIAERFWWSLMVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSTQHRQQYG 707

Query: 698  PSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALLSEPWHASGET 757
            PSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSAL+ EPW ASGET
Sbjct: 708  PSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPEPWQASGET 767

Query: 758  LSGIDPEAMAVEPALIPSIQGCKVMQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTA 817
            LSGIDPEAMAVEP+L+PSI      QAYVDAVLDLASHFITRLRRYASFCRTLASHAVTA
Sbjct: 768  LSGIDPEAMAVEPSLVPSI------QAYVDAVLDLASHFITRLRRYASFCRTLASHAVTA 827

Query: 818  GTGSNRNMVTSPTQ-SXXXXXXXXXXXXXXXXXXXTQMQAWVQGAIAKISSTTDGVASST 877
            GTGSNRNMV SPTQ S                   TQMQAWVQGAIAKISSTTDGV+SS 
Sbjct: 828  GTGSNRNMVASPTQSSASPATNQGGQSGTTNSTGSTQMQAWVQGAIAKISSTTDGVSSSA 887

Query: 878  PNPISGSSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRYISNS 937
            PNPISG S+FMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPR+   S
Sbjct: 888  PNPISGPSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFTGAS 947

Query: 938  QKNADANIQKPQPAVPGKVEEISSNSVKPVPNIIKPEESQIARAVPLVTGAKGAEEGLAG 997
            Q+N D ++QKPQ   PGKVEE+ S   KP+ ++++ +E+Q+ARA  ++ GAK  EEG +G
Sbjct: 948  QRNTDTSVQKPQSGPPGKVEEMGSAPTKPL-SVVRTDENQVARAGQVMPGAKAVEEGSSG 1007

Query: 998  RSRIGTGNAGQGYTSEEVKVLFLILIDLCRRTASLPHPLPVSQVGSSNIQVRLHYIDGNY 1057
            RSR+G+GNAGQGYT EEV+VLFLIL+DLCRRT+ L HPLPVSQVGSSNIQVRLHYIDGNY
Sbjct: 1008 RSRLGSGNAGQGYTFEEVRVLFLILMDLCRRTSGLAHPLPVSQVGSSNIQVRLHYIDGNY 1067

Query: 1058 TVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSDVDDLG 1117
            TVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSD DD+G
Sbjct: 1068 TVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSDPDDMG 1127

Query: 1118 STDDNSKLSNSSDPLDLNSLENCNVYYGANGLWPRKRRMSERDAAFGLNTSIGLGAYLGI 1177
            S DD  KLSNS+DPLD +SLE+C+VYYG  GLWPRKRRMSERDAAFGLNTS+GLGAYLGI
Sbjct: 1128 SLDDTPKLSNSADPLDFSSLESCDVYYGTQGLWPRKRRMSERDAAFGLNTSVGLGAYLGI 1187

Query: 1178 MGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWAYGCP 1237
            MGSRRDVVTAVWKTGLEGVWYKC+RCLRQTSA ASP ATN   QN+RE WWISRWAYGCP
Sbjct: 1188 MGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPSATNPPNQNDREVWWISRWAYGCP 1246

[Close]

BLAST of Carg21491 vs. TrEMBL
Match: tr|B9RZ66|B9RZ66_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0935900 PE=4 SV=1)

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1035/1237 (83.67%), Postives = 1126/1237 (91.03%), Query Frame = 0


Query: 9    EGEEEPLVQPLEL---PKGSDKT--EVVAVEEEVMEKPEDPMDEDLISPATVFRIKLKQP 68
            E EEE + Q LE+     GSDK   E V+ EE+ +EKP+DPM+ED +SPATVF I+LKQP
Sbjct: 21   EPEEESVGQSLEIVAKGAGSDKPAGEPVSSEEDSVEKPDDPMEEDSVSPATVFCIRLKQP 80

Query: 69   RSNLQYKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERP 128
            RSNLQ+KMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERP
Sbjct: 81   RSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERP 140

Query: 129  TECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRSTIWTQPSRGPANLVRDASCW 188
            TECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGR TIWTQPS+GP N+VRDASCW
Sbjct: 141  TECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQPSQGPVNMVRDASCW 200

Query: 189  QLEHEWRQDIAVVTKWLSGLSAYRWLSAKSSSS-NSKPNFEEKFLPQQSQTSARWPNFLC 248
            Q EHEWRQDIAVVTKWLSG+S YRWLS+KSSSS NSK  FEEKFL QQSQTSARWPNFLC
Sbjct: 201  QREHEWRQDIAVVTKWLSGVSPYRWLSSKSSSSTNSKSTFEEKFLSQQSQTSARWPNFLC 260

Query: 249  VCSVFSSGSVQLHWSQWPSSQNSSPSKWFCTSKGLLGAGPSGIMAADAIITDSGAMHVAG 308
            VCSVFSSGSVQLHWSQWP S+ ++  +WFCTSKGLLGAGPSGIMAADAI+TDSGAMHVAG
Sbjct: 261  VCSVFSSGSVQLHWSQWPPSRTNATPEWFCTSKGLLGAGPSGIMAADAIVTDSGAMHVAG 320

Query: 309  VPIVNPSTVVVWEVTPGPGNGFQATPKTSTSNGVPAPLSPPNWSGFAPLAAYLFSWQEFL 368
            VPIVNPSTVVVWEVTPG G+GFQATPKTS SNGVP  L+PPNWSGFAPLAAYLFSWQE+L
Sbjct: 321  VPIVNPSTVVVWEVTPGLGHGFQATPKTSISNGVPPSLNPPNWSGFAPLAAYLFSWQEYL 380

Query: 369  LSELKQGKNKT-QDVNDSIPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPTQ 428
            +SE KQG+  T QD ++++ LHCSPVSNFSAYVSPEAAAQSA TTTWGSGVTAVAFDPT+
Sbjct: 381  ISEAKQGRKHTDQDFSNTVSLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTR 440

Query: 429  GGSVIAIVIVEGQYMSPYDPDEGPSISGWRVQRWESSLQPVVLHQIFGSPTASFGGQAPM 488
            GGSVIA+VIVEGQYMSPYDPDEGPSI+GWRVQRWESSLQPVVLHQIFG+PT+SFGGQAPM
Sbjct: 441  GGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQPVVLHQIFGNPTSSFGGQAPM 500

Query: 489  QTVWLSKVDMSISPTSDFKSNQSTASGPNSDLQKLSGAYVDKAKRVCFDPFDLPSDVRTL 548
            QTVW+SKVD SI PT+DFK++Q+ ++GP  D +K S + V+KAK + FDPFDLPSDVR+L
Sbjct: 501  QTVWVSKVDTSIPPTNDFKNHQTVSAGPAPDARKASDSGVEKAKSLTFDPFDLPSDVRSL 560

Query: 549  ARIVYSAHGGEIAVAFLCGGVHIFSGPNFAPVENYQINVGPAIAAPAFSSTSCCSASVWH 608
            ARIVYSAHGGEIA+AFL GGVHIFSGPNF PV++YQINVG AIAAPAFSSTSCCSASVWH
Sbjct: 561  ARIVYSAHGGEIAIAFLRGGVHIFSGPNFTPVDSYQINVGSAIAAPAFSSTSCCSASVWH 620

Query: 609  EVNKDYTMLKIIRVLPPAAPNNQLKANSSTWERAVAERFWWSLLVGVDWWDAVACTQSAA 668
            + +KD T+LKIIRVLPPA P++Q+KANSSTWERA+AERFWWSLLVGVDWWDAV CTQSAA
Sbjct: 621  DTSKDRTILKIIRVLPPAVPSSQVKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAA 680

Query: 669  EDGIVSPNSVIAVLDADFHSLPSSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQAR 728
            ED IVS NSVIAVLDADFHSLPS+QHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQAR
Sbjct: 681  EDNIVSLNSVIAVLDADFHSLPSTQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQAR 740

Query: 729  LLLDMLGKGIESALINPSALLSEPWHASGETLSGIDPEAMAVEPALIPSIQGCKVMQAYV 788
            LLLDMLGKGIESALINPSAL+ EPW ASGETLSGIDPEAMAVEP+L+PSI      QAYV
Sbjct: 741  LLLDMLGKGIESALINPSALVPEPWQASGETLSGIDPEAMAVEPSLVPSI------QAYV 800

Query: 789  DAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQS-XXXXXXXXXXXXX 848
            DAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNR+MVTSPTQS XXXXXXXXXXXXX
Sbjct: 801  DAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRSMVTSPTQSAXXXXXXXXXXXXX 860

Query: 849  XXXXXXTQMQAWVQGAIAKISSTTDGVASSTPNPISGSSTFMPISINTGTFPGTPAVRLI 908
            XXXXXX QMQAWVQGAIAKISST DGV+++TPNPISG S+FMPISINTGTFPGTPAVRLI
Sbjct: 861  XXXXXXXQMQAWVQGAIAKISSTNDGVSNATPNPISGPSSFMPISINTGTFPGTPAVRLI 920

Query: 909  GDCHFLHRLCQLLLFCFFFRRTQLPRYISNSQKNADANIQKPQPAVPGKVEEISSNSVKP 968
            GDCHFLHRLCQLLLFCFFFRRTQLPR+I  +Q++ D N+QKPQ   PGKVEE +S S KP
Sbjct: 921  GDCHFLHRLCQLLLFCFFFRRTQLPRFIGVAQRSTDTNMQKPQSGAPGKVEEANSVSSKP 980

Query: 969  VPNIIKPEESQIARAVPLVTGAKGAEEGLAGRSRIGTGNAGQGYTSEEVKVLFLILIDLC 1028
               +++ +E Q AR   LV G KG EEG AGRSR+G GNAGQGYT EEVKVLFLIL+DLC
Sbjct: 981  AQAMVRSDEVQTARGGQLVPGGKGVEEGPAGRSRLGYGNAGQGYTFEEVKVLFLILMDLC 1040

Query: 1029 RRTASLPHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1088
            RRTA+L HPLPVSQVGSSNIQVRLHYI+GNYTVLPEVVEASLGPHMQNMPRPRGADAAGL
Sbjct: 1041 RRTAALAHPLPVSQVGSSNIQVRLHYINGNYTVLPEVVEASLGPHMQNMPRPRGADAAGL 1100

Query: 1089 LLRELELHPPAEEWHRRNMYGGPWSDVDDLGSTDDNSKLSNSSDPLDLNSLENCNVYYGA 1148
            LLRELELHPP+EEWHRRNM+GGPWSD +D+ S DD  ++S+ +D LD +SLENC+VYYG 
Sbjct: 1101 LLRELELHPPSEEWHRRNMFGGPWSDPEDITSADDTPRMSSYTDSLDFSSLENCDVYYGV 1160

Query: 1149 NGLWPRKRRMSERDAAFGLNTSIGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQ 1208
            NGLWPRKRRMSERDAAFGLNTS+GLGAYLGIMGSRRDVVTAVWKTGLEGVWYKC+RCLRQ
Sbjct: 1161 NGLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQ 1220

Query: 1209 TSAFASPGATNDTTQNERETWWISRWAYGCPMCGGTW 1238
            TSAFASPGATN   QN+RE WWISRWAYGCPMCGGTW
Sbjct: 1221 TSAFASPGATNPPNQNDREAWWISRWAYGCPMCGGTW 1251

The following BLAST results are available for this feature:

BLAST of Carg21491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519315.1	0.0e+00	99.19	mediator of RNA polymerase II transcription subunit 16 [Cucurbita pepo subsp. pe...	[more]
XP_022927009.1	0.0e+00	99.03	mediator of RNA polymerase II transcription subunit 16 [Cucurbita moschata]	[more]
XP_023001689.1	0.0e+00	98.71	mediator of RNA polymerase II transcription subunit 16 [Cucurbita maxima]	[more]
XP_008442342.1	0.0e+00	94.43	PREDICTED: mediator of RNA polymerase II transcription subunit 16 [Cucumis melo]	[more]
XP_011653115.1	0.0e+00	94.11	PREDICTED: mediator of RNA polymerase II transcription subunit 16 [Cucumis sativ...	[more]

BLAST of Carg21491 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04920.1	0.0e+00	75.68	sensitive to freezing 6	[more]

BLAST of Carg21491 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JGZ1\|MED16_ARATH	0.0e+00	75.68	Mediator of RNA polymerase II transcription subunit 16 OS=Arabidopsis thaliana O...	[more]

BLAST of Carg21491 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B503\|A0A1S3B503_CUCME	0.0e+00	94.43	mediator of RNA polymerase II transcription subunit 16 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0LUJ6\|A0A0A0LUJ6_CUCSA	0.0e+00	94.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073710 PE=4 SV=1	[more]
tr\|A0A2I4EL97\|A0A2I4EL97_9ROSI	0.0e+00	82.43	mediator of RNA polymerase II transcription subunit 16 isoform X1 OS=Juglans reg...	[more]
tr\|A0A2P5FE95\|A0A2P5FE95_9ROSA	0.0e+00	83.83	Mediator of RNA polymerase II transcription subunit OS=Trema orientalis OX=63057...	[more]
tr\|B9RZ66\|B9RZ66_RICCO	0.0e+00	83.67	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0935900 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0016592	mediator complex

Vocabulary: **INTERPRO**
Term	Definition
IPR038836	MED16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21491-RA	Carg21491-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 814..845
IPR038836	Mediator of RNA polymerase II transcription subunit 16	PANTHER	PTHR35130	FAMILY NOT NAMED	coord: 34..1237

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21491	Cla019493	Watermelon (97103) v1	carwmB0948
Carg21491	Csa1G073710	Cucumber (Chinese Long) v2	carcuB0963
Carg21491	MELO3C002588	Melon (DHL92) v3.5.1	carmeB0930
Carg21491	ClCG03G005910	Watermelon (Charleston Gray)	carwcgB0925
Carg21491	CSPI01G11980	Wild cucumber (PI 183967)	carcpiB0986
Carg21491	Cucsa.126550	Cucumber (Gy14) v1	carcgyB1068
Carg21491	CmaCh13G006520	Cucurbita maxima (Rimu)	carcmaB1297
Carg21491	CmoCh13G006710	Cucurbita moschata (Rifu)	carcmoB1268
Carg21491	Lsi02G007400	Bottle gourd (USVL1VR-Ls)	carlsiB866
Carg21491	Cp4.1LG20g04170	Cucurbita pepo (Zucchini)	carcpeB1314
Carg21491	CsGy1G011980	Cucumber (Gy14) v2	carcgybB0936
Carg21491	MELO3C002588.2	Melon (DHL92) v3.6.1	carmedB0936
Carg21491	CsaV3_1G012140	Cucumber (Chinese Long) v3	carcucB0991
Carg21491	Cla97C03G057220	Watermelon (97103) v2	carwmbB0999
Carg21491	Bhi08G001268	Wax gourd	carwgoB1100

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21491	Cucumber (Gy14) v1	carcgyB1067
Carg21491	Cucumber (Gy14) v1	carcgyB1069
Carg21491	Cucurbita maxima (Rimu)	carcmaB1296
Carg21491	Cucurbita maxima (Rimu)	carcmaB1298
Carg21491	Cucurbita moschata (Rifu)	carcmoB1267
Carg21491	Cucurbita moschata (Rifu)	carcmoB1269
Carg21491	Cucurbita moschata (Rifu)	carcmoB1270
Carg21491	Cucurbita pepo (Zucchini)	carcpeB1312
Carg21491	Cucurbita pepo (Zucchini)	carcpeB1313
Carg21491	Cucurbita pepo (Zucchini)	carcpeB1315
Carg21491	Wild cucumber (PI 183967)	carcpiB0987
Carg21491	Cucumber (Chinese Long) v2	carcuB0964
Carg21491	Cucumber (Chinese Long) v3	carcucB0992
Carg21491	Cucumber (Chinese Long) v3	carcucB0993
Carg21491	Bottle gourd (USVL1VR-Ls)	carlsiB865
Carg21491	Melon (DHL92) v3.5.1	carmeB0931
Carg21491	Melon (DHL92) v3.6.1	carmedB0937
Carg21491	Watermelon (Charleston Gray)	carwcgB0923
Carg21491	Watermelon (Charleston Gray)	carwcgB0924
Carg21491	Watermelon (97103) v1	carwmB0950
Carg21491	Watermelon (97103) v1	carwmB0951
Carg21491	Watermelon (97103) v2	carwmbB0998
Carg21491	Watermelon (97103) v2	carwmbB0997
Carg21491	Wax gourd	carwgoB1098
Carg21491	Cucurbita maxima (Rimu)	carcmaB1300
Carg21491	Silver-seed gourd	carcarB179
Carg21491	Silver-seed gourd	carcarB564