Carg16498 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16498
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	guanine deaminase
Location	Cucurbita_argyrosperma_scaffold_130 : 1061714 .. 1064344 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTCTATTTCTCTCTCTTCTGCTGCTCTCTTCTTCCAGTTCTTCATTCATTGTCTCCCAACATTATTTATACACCTCCATTTCTTGCTTCTCTTCTGCACTTCTTCCTCTCTCGATCCCCATCCCTAAATCCCTATCCTCATCATGGCTGATTCTTCTACTGGTAATCGCCTCATTCTCATTCTCCTTCTCCTCCTTTCCGATCATTCCCCGCATTCCCCTTTCGCCCAATGTGAATTCGGATCGGATGATTCTTTATTTTAATTACCTGTTCTGTAATCCATGTTGTTTTCTGTTTTTTTTCTTCTCCGATCTCTCTGGATTCTTTGTCCTGATTTTGCATGATGTCATTGATTCCGCATCGGGAGGGTATTTCTATGTTTGCATGATTTGGGTTTTTTTTTTTTCGGGGACAGTTGTTTGATCTTAGAGGTTTGAAATCGAACAGTTTTTTGGTGTTGATTTGTGAAATTAGGATGAATTTCGTCTCCGGATTTGGAATTTTTAGCTCGTTATTAGAGACGTGGTTCATGATGCTTCCTAATTGTTCGTTATTTTGCTTTTGGAATTTCCAGACCCGGGTCAACTATGAACTCTTTTCTAATTTTGCGTATTTCTACGTTTTATTTTTGTTGTTCATCTGATTCTAAATCTGTATGTTATTTCGTTTTATTTTTCTTTTTCTCTAGCCTGGAAGATCAATTAACATGATTCATTCTGTGGTATTATTGATTTTGTATTTCTTCCTTATTTTCAGTGGTGGAAGCCATAGATGGAACTATCTCTGTAGCATCTGCATTTGCTTGTCATCAAGAAGGTACTAACATAACAACTCGCTTTCCATTTTTTATTAATTTGTTTTCATGTTTTTGATTTGTACATTTCTTATTTAATATTTCCTTTTGCCTTTTTCCCATCAAAACTCAAGGGAGAATAGATCCTTTTCTCATATTTAAATTTTCTGTTACATTTAGGGCCCTTAATATCTACATGTAATTGTCAAGATTGTTCTTGTTCTTGTCTGTCTTGGATGATTGGTCCAAATTGATATAACCTCCCCTGGCCTTTAGATCAGTGAAGTTCTAGAATTTTGATCCCTTTTCTTCATGGGTTTATGATTTCTTATGGATTTGGTGTAATCTATTTTGTTGCCATTGTAATATGTTTCACTTGAGAGATCTTCAGTTCAAAATCGTCCTGTCTGAAAGTAAAATTCTGTTTAGGGAGAGATTTTGTCTATAGGAATCTATTCATTGCTTTGCTATGAGCATTTGTTTTGTTCATCATTTAATTCGAAGCCGAAATGAACAAATTGTCCGAGCTTTAACAATATTCCATTGATGTTTTCATGTTTAAATTAGCTGTACAAGATAGAGACTACAAGTTCTTGACTCAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGCCCTTTCGGAGCAGTTGTTGTTCATAACGATGAAGTAGTTGTGAGCTGTCACAACATGGTCTTGAGAAACACTGATCCTACAGCACATGCTGAAGTCACTGCAGTTCGGGAGGTCGGTATAAATCATTCTTAGTTTTCTTGAAGTGCTTTGCATAAAAAAAGTTGATCTTGACATTGAAAGTGAAAAAGTCATTTGATCATGAAATTATGTGTCTGGTTAGTCCTGATTATGGAATAATATGAGTACCAAGATCGATAGAACTGTAATGGCCCAAGTCTACCACTAGCAGATACCTTCAAGGTTTTTAAAGCGCCTATGCTAGGAGAGGTTTCCACACCCTTGTAAAGAATGCTTTGTTCTCTTTTTCAACCGATGTGAGATCTCACAATCCACCTCCCTGTGGGGCCCAACGAGCTTCATTCTCCTCTTCCACCGATGTGGGATCTCATAGAACTTATTGCATTCATAGAACTTATGTTTTCTCATTGACATATGTTATTCGTTATATATTCGAACTGCAATCTGCAAATATATCTCCTTGTGAGCTGTTGATTTAACGCAATTCATGACGACTTTCCTCTTCTATAGGCCTGCAAAAAACTCGGCCAAATCGAACTTTCAGACTGTGAGATCTATGCATCGTGCGAGCCATGTCCAATGTGCTTCGGTGCAATCCATCTTTCAAGAATTAAGGTTTGTGATTGGAATTAGTCGTTAATCATCTTGCTCGTGTTCCTAGTCTCTTATCGTTTATCTGGAAACAAACAGAGATTGGTGTATGGAGCGAAAGCAGAAGCTGCAATAGCGATCGGGTTCGATGATTTCATAGCTGATGCCATAAGGGGGACCGGGTTTTATCAGAAGGCTCACCTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTTATTGCTGAGCAAGTGTTTGAGAAAACAAAGGCAAAATTTCAATTGTACTGAATCTGCATCATCATCCACCCTTCCTGTTAAAATAAATAAATTATCAACTGTTCATATATCCTTTATCCTAAATTCATGGAACTATCATGCAGTTGTAGCTTTCCTTTTAACTTTCAATTAACACAGTTTCTGTATCTTCGTCTTCAAGAAATGGTTCACTTTATTATATAAATTCTGTATTTTATTACATGTATCCAACATTTTCTTTCGAATTTCGTAAAATATTCTAAT

mRNA sequence

TCTTTTCTATTTCTCTCTCTTCTGCTGCTCTCTTCTTCCAGTTCTTCATTCATTGTCTCCCAACATTATTTATACACCTCCATTTCTTGCTTCTCTTCTGCACTTCTTCCTCTCTCGATCCCCATCCCTAAATCCCTATCCTCATCATGGCTGATTCTTCTACTGTGGTGGAAGCCATAGATGGAACTATCTCTGTAGCATCTGCATTTGCTTGTCATCAAGAAGCTGTACAAGATAGAGACTACAAGTTCTTGACTCAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGCCCTTTCGGAGCAGTTGTTGTTCATAACGATGAAGTAGTTGTGAGCTGTCACAACATGGTCTTGAGAAACACTGATCCTACAGCACATGCTGAAGTCACTGCAGTTCGGGAGGCCTGCAAAAAACTCGGCCAAATCGAACTTTCAGACTGTGAGATCTATGCATCGTGCGAGCCATGTCCAATGTGCTTCGGTGCAATCCATCTTTCAAGAATTAAGAGATTGGTGTATGGAGCGAAAGCAGAAGCTGCAATAGCGATCGGGTTCGATGATTTCATAGCTGATGCCATAAGGGGGACCGGGTTTTATCAGAAGGCTCACCTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTTATTGCTGAGCAAGTGTTTGAGAAAACAAAGGCAAAATTTCAATTGTACTGAATCTGCATCATCATCCACCCTTCCTGTTAAAATAAATAAATTATCAACTGTTCATATATCCTTTATCCTAAATTCATGGAACTATCATGCAGTTGTAGCTTTCCTTTTAACTTTCAATTAACACAGTTTCTGTATCTTCGTCTTCAAGAAATGGTTCACTTTATTATATAAATTCTGTATTTTATTACATGTATCCAACATTTTCTTTCGAATTTCGTAAAATATTCTAAT

Coding sequence (CDS)

ATGGCTGATTCTTCTACTGTGGTGGAAGCCATAGATGGAACTATCTCTGTAGCATCTGCATTTGCTTGTCATCAAGAAGCTGTACAAGATAGAGACTACAAGTTCTTGACTCAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGCCCTTTCGGAGCAGTTGTTGTTCATAACGATGAAGTAGTTGTGAGCTGTCACAACATGGTCTTGAGAAACACTGATCCTACAGCACATGCTGAAGTCACTGCAGTTCGGGAGGCCTGCAAAAAACTCGGCCAAATCGAACTTTCAGACTGTGAGATCTATGCATCGTGCGAGCCATGTCCAATGTGCTTCGGTGCAATCCATCTTTCAAGAATTAAGAGATTGGTGTATGGAGCGAAAGCAGAAGCTGCAATAGCGATCGGGTTCGATGATTTCATAGCTGATGCCATAAGGGGGACCGGGTTTTATCAGAAGGCTCACCTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTTATTGCTGAGCAAGTGTTTGAGAAAACAAAGGCAAAATTTCAATTGTACTGA

Protein sequence

MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY

Homology

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BLAST of Carg16498 vs. NCBI nr
Match: XP_022933088.1 (uncharacterized protein LOC111439808 [Cucurbita moschata] >XP_023001162.1 uncharacterized protein LOC111495380 [Cucurbita maxima])

HSP 1 Score: 377.5 bits (968), Expect = 2.7e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60

Query: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
           HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180
           LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT
Sbjct: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           KAKFQLY
Sbjct: 181 KAKFQLY 187

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BLAST of Carg16498 vs. NCBI nr
Match: XP_023532001.1 (uncharacterized protein LOC111794098 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.3 bits (965), Expect = 5.9e-101
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEAIDGTISVASAF+CHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVASAFSCHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60

Query: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
           HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180
           LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT
Sbjct: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           KAKFQLY
Sbjct: 181 KAKFQLY 187

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BLAST of Carg16498 vs. NCBI nr
Match: XP_008450773.1 (PREDICTED: guanine deaminase [Cucumis melo])

HSP 1 Score: 363.2 bits (931), Expect = 5.2e-97
Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEAIDGTISVASAF CHQEAVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVASAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
            NDEVVVSCHNMV RNTDPTAHAEVTAVREACKKLG+IELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180
           LSRIKRLVYGAKAEAAIA+GFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT
Sbjct: 121 LSRIKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           K KFQLY
Sbjct: 181 KEKFQLY 187

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BLAST of Carg16498 vs. NCBI nr
Match: XP_022153530.1 (uncharacterized protein LOC111021013 [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 2.2e-95
Identity = 175/185 (94.59%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 3   DSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHN 62
           + +TVVEAIDGT+SVASAF+CHQEAVQ+RD+KFLT+AVEEAYKGVECGDGGPFGAVVV N
Sbjct: 2   EDATVVEAIDGTLSVASAFSCHQEAVQNRDHKFLTKAVEEAYKGVECGDGGPFGAVVVRN 61

Query: 63  DEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           DEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTK 
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKE 181

Query: 183 KFQLY 188
           KFQLY
Sbjct: 182 KFQLY 186

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BLAST of Carg16498 vs. NCBI nr
Match: XP_023515871.1 (uncharacterized protein LOC111779907 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 3.7e-95
Identity = 177/187 (94.65%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEA DGT+SVASAF CHQE VQDRD KFLTQAVEEAYKGVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAKDGTLSVASAFGCHQEDVQDRDLKFLTQAVEEAYKGVECGDGGPFGAVVV 60

Query: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
            NDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180
           LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADG+G  IAEQVFE T
Sbjct: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGSGVAIAEQVFENT 180

Query: 181 KAKFQLY 188
           KAKFQLY
Sbjct: 181 KAKFQLY 187

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BLAST of Carg16498 vs. TAIR10
Match: AT5G28050.2 (Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 318.2 bits (814), Expect = 3.5e-87
Identity = 153/183 (83.61%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 5   STVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDE 64
           S+ +EA DGTISVASAF+ HQ+AV D D+KFLTQAVEEAYKGV+CGDGGPFGAV+VHN+E
Sbjct: 22  SSELEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNE 81

Query: 65  VVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRI 124
           VV SCHNMVL+ TDPTAHAEVTA+REACKKL +IELS+CEIYASCEPCPMCFGAIHLSR+
Sbjct: 82  VVASCHNMVLKYTDPTAHAEVTAIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRL 141

Query: 125 KRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKF 184
           KRLVYGAKAEAAIAIGFDDFIADA+RGTG YQK+ LEIKKADGNGA IAEQVF+ TK KF
Sbjct: 142 KRLVYGAKAEAAIAIGFDDFIADALRGTGVYQKSSLEIKKADGNGAAIAEQVFQNTKEKF 201

Query: 185 QLY 188
           +LY
Sbjct: 202 RLY 204

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BLAST of Carg16498 vs. TAIR10
Match: AT3G05300.1 (Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-40
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 72  MVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 131
           MV +  DPTAHAEV A+REACKKL +I+LS+CEIYASCEPCPMCFGAIHLSR+KRLVY A
Sbjct: 1   MVFKYKDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60

Query: 132 KAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQL 187
           K EAA+AIGF+  +AD +RG G Y  ++LEI K D     IAEQVF+ TK KF L
Sbjct: 61  KVEAALAIGFNRILADGVRGVGCYHNSNLEITKLD---LSIAEQVFQNTKGKFSL 112

[Close]

BLAST of Carg16498 vs. TAIR10
Match: AT1G68720.1 (tRNA arginine adenosine deaminase)

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 32   DYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREA 91
            D  F+ +A+ EA K  +  +  P GAV+VH+ +++   +N+V    D TAHAE+  +RE 
Sbjct: 1110 DEIFMREALVEAKKAADTWE-VPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREG 1169

Query: 92   CKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
             K L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1170 SKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

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BLAST of Carg16498 vs. TAIR10
Match: AT1G48175.1 (Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-05
Identity = 26/86 (30.23%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 54  PFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKL-------GQI--ELSDCE 113
           P G V + + +V+ S  N      + T HAE+ A+ +   +         Q+  + S C 
Sbjct: 30  PVGCVFLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQKDGLSPSQVAEKFSKCV 89

Query: 114 IYASCEPCPMCFGAIHLSRIKRLVYG 131
           +Y +CEPC MC  A+    IK + YG
Sbjct: 90  LYVTCEPCIMCASALSFLGIKEVYYG 115

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BLAST of Carg16498 vs. Swiss-Prot
Match: sp|Q94BU8|GSDA_ARATH (Guanosine deaminase OS=Arabidopsis thaliana OX=3702 GN=GSDA PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 4.8e-86
Identity = 153/180 (85.00%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 8   VEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVV 67
           VEA DGTISVASAF+ HQ+AV D D+KFLTQAVEEAYKGV+CGDGGPFGAV+VHN+EVV 
Sbjct: 6   VEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVA 65

Query: 68  SCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRL 127
           SCHNMVL+ TDPTAHAEVTA+REACKKL +IELS+CEIYASCEPCPMCFGAIHLSR+KRL
Sbjct: 66  SCHNMVLKYTDPTAHAEVTAIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRL 125

Query: 128 VYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 187
           VYGAKAEAAIAIGFDDFIADA+RGTG YQK+ LEIKKADGNGA IAEQVF+ TK KF+LY
Sbjct: 126 VYGAKAEAAIAIGFDDFIADALRGTGVYQKSSLEIKKADGNGAAIAEQVFQNTKEKFRLY 185

[Close]

BLAST of Carg16498 vs. Swiss-Prot
Match: sp|O34598|GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis (strain 168) OX=224308 GN=guaD PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 35  FLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 94
           FL +AV  A +GV  G GGPFGAV+V +  ++    N V  + DPTAHAEVTA+R+ACK 
Sbjct: 6   FLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKV 65

Query: 95  LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDD 144
           LG  +L DC +Y SCEPCPMC GAI+ +R K + Y A+   A   GFDD
Sbjct: 66  LGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDD 114

[Close]

BLAST of Carg16498 vs. Swiss-Prot
Match: sp|Q99W51|TADA_STAAM (tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tadA PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.6e-18
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 32  DYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREA 91
           D  F+T A+EEA K  + G+  P GA++  +DEV+   HN+      PTAHAE  A+  A
Sbjct: 4   DIYFMTLAIEEAKKAAQLGE-VPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERA 63

Query: 92  CKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
            K LG   L  C +Y + EPC MC G I +SRI R+VYGA
Sbjct: 64  AKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGA 102

[Close]

BLAST of Carg16498 vs. Swiss-Prot
Match: sp|O67050|TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=tadA PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-16
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 35  FLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 94
           FL  A+ EA +  E G+  P GA++V   E++   HN V    DPTAHAE+ A++EAC++
Sbjct: 6   FLKVALREAKRAFEKGE-VPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRR 65

Query: 95  LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
           L    L  CE+Y + EPC MC  A+ LSRI+++++ A
Sbjct: 66  LNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSA 101

[Close]

BLAST of Carg16498 vs. Swiss-Prot
Match: sp|P21335|TADA_BACSU (tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) OX=224308 GN=tadA PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-16
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 31  RDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVRE 90
           +D  ++ +A++EA K  E G+  P GAV+V N E++   HN+        AHAE+  + E
Sbjct: 3   QDELYMKEAIKEAKKAEEKGE-VPIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDE 62

Query: 91  ACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 132
           ACK LG   L    +Y + EPCPMC GA+ LSR++++V+GA
Sbjct: 63  ACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA 102

[Close]

BLAST of Carg16498 vs. TrEMBL
Match: tr|A0A1S3BR12|A0A1S3BR12_CUCME (guanine deaminase OS=Cucumis melo OX=3656 GN=LOC103492254 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.4e-97
Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEAIDGTISVASAF CHQEAVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISVASAFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
            NDEVVVSCHNMV RNTDPTAHAEVTAVREACKKLG+IELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180
           LSRIKRLVYGAKAEAAIA+GFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT
Sbjct: 121 LSRIKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           K KFQLY
Sbjct: 181 KEKFQLY 187

[Close]

BLAST of Carg16498 vs. TrEMBL
Match: tr|A0A0A0LZ82|A0A0A0LZ82_CUCSA (Guanine deaminase OS=Cucumis sativus OX=3659 GN=Csa_1G574840 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 7.2e-95
Identity = 177/187 (94.65%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MADSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVV 60
           MADSSTVVEAIDGTISV  AF CHQEAVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV
Sbjct: 1   MADSSTVVEAIDGTISV--AFGCHQEAVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVV 60

Query: 61  HNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIH 120
            NDEVVVSCHNMV RNTDPTAHAEVTAVREACKKLG+IELSDCEIYASCEPCPMCFGAIH
Sbjct: 61  RNDEVVVSCHNMVRRNTDPTAHAEVTAVREACKKLGKIELSDCEIYASCEPCPMCFGAIH 120

Query: 121 LSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180
           LSRIKRLVYGAKAEAAIA+GFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT
Sbjct: 121 LSRIKRLVYGAKAEAAIAVGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKT 180

Query: 181 KAKFQLY 188
           K KFQLY
Sbjct: 181 KEKFQLY 185

[Close]

BLAST of Carg16498 vs. TrEMBL
Match: tr|A0A1Q3DD92|A0A1Q3DD92_CEPFO (dCMP_cyt_deam_1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33829 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.7e-91
Identity = 168/185 (90.81%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 3   DSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHN 62
           + + VVEA DGTISVASAFA +QE V+DRD+KFLT+AVEEAYKGVECGDGGPFGAVVVH 
Sbjct: 2   EEAKVVEAKDGTISVASAFAAYQEVVKDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVHK 61

Query: 63  DEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           DEVVVSCHNMVL+NTDPTAHAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVVVSCHNMVLKNTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKA 182
           RIKRLVYGA+AEAAIAIGFDDFIADA+RGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKA
Sbjct: 122 RIKRLVYGAEAEAAIAIGFDDFIADALRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKA 181

Query: 183 KFQLY 188
           KFQLY
Sbjct: 182 KFQLY 186

[Close]

BLAST of Carg16498 vs. TrEMBL
Match: tr|A0A2R6R1G1|A0A2R6R1G1_ACTCH (Guanine deaminase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11024 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.7e-91
Identity = 168/185 (90.81%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 3   DSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHN 62
           + + VVEA DGTISVASAFA HQEAVQDRD+KFLT+AVEEAYKGVECGDGGPFGAVVV  
Sbjct: 2   EDANVVEAKDGTISVASAFAGHQEAVQDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVRK 61

Query: 63  DEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           DEVVVSCHNMVLRNTDPTAHAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 62  DEVVVSCHNMVLRNTDPTAHAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLS 121

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKAHLEIK+ADGNGA+IAEQVFEKTKA
Sbjct: 122 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAHLEIKRADGNGAMIAEQVFEKTKA 181

Query: 183 KFQLY 188
           KF +Y
Sbjct: 182 KFPMY 186

[Close]

BLAST of Carg16498 vs. TrEMBL
Match: tr|A0A2P4MYN7|A0A2P4MYN7_QUESU (Guanine deaminase OS=Quercus suber OX=58331 GN=CFP56_49720 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.1e-90
Identity = 163/185 (88.11%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 3   DSSTVVEAIDGTISVASAFACHQEAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHN 62
           + +TVVE  DGT+SVASAFA HQ+AV+DRD+ FLT+AVEEAY+GVECGDGGPFGAVVV N
Sbjct: 92  EEATVVETNDGTVSVASAFAAHQQAVKDRDHAFLTKAVEEAYRGVECGDGGPFGAVVVRN 151

Query: 63  DEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLS 122
           DEVVVSCHNMVL+NTDPTAHAEVTA+REACKKL Q+ELSDCEIYASCEPCPMCFGAIHLS
Sbjct: 152 DEVVVSCHNMVLKNTDPTAHAEVTAIREACKKLQQVELSDCEIYASCEPCPMCFGAIHLS 211

Query: 123 RIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKA 182
           RIKRLVYGAKAEAAIAIGFDDFIADA+RGTGFYQKAHLEIK+ADGNGA IAEQVFEKTKA
Sbjct: 212 RIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAHLEIKRADGNGAAIAEQVFEKTKA 271

Query: 183 KFQLY 188
           KFQ+Y
Sbjct: 272 KFQMY 276

The following BLAST results are available for this feature:

BLAST of Carg16498 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933088.1	2.7e-101	100.00	uncharacterized protein LOC111439808 [Cucurbita moschata] >XP_023001162.1 unchar...	[more]
XP_023532001.1	5.9e-101	99.47	uncharacterized protein LOC111794098 [Cucurbita pepo subsp. pepo]	[more]
XP_008450773.1	5.2e-97	95.72	PREDICTED: guanine deaminase [Cucumis melo]	[more]
XP_022153530.1	2.2e-95	94.59	uncharacterized protein LOC111021013 [Momordica charantia]	[more]
XP_023515871.1	3.7e-95	94.65	uncharacterized protein LOC111779907 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16498 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28050.2	3.5e-87	83.61	Cytidine/deoxycytidylate deaminase family protein	[more]
AT3G05300.1	7.1e-40	67.83	Cytidine/deoxycytidylate deaminase family protein	[more]
AT1G68720.1	1.2e-15	41.00	tRNA arginine adenosine deaminase	[more]
AT1G48175.1	1.1e-05	30.23	Cytidine/deoxycytidylate deaminase family protein	[more]

BLAST of Carg16498 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94BU8\|GSDA_ARATH	4.8e-86	85.00	Guanosine deaminase OS=Arabidopsis thaliana OX=3702 GN=GSDA PE=1 SV=1	[more]
sp\|O34598\|GUAD_BACSU	5.1e-27	53.21	Guanine deaminase OS=Bacillus subtilis (strain 168) OX=224308 GN=guaD PE=1 SV=1	[more]
sp\|Q99W51\|TADA_STAAM	5.6e-18	46.00	tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 7...	[more]
sp\|O67050\|TADA_AQUAE	1.8e-16	43.30	tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=...	[more]
sp\|P21335\|TADA_BACSU	1.8e-16	41.58	tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]

BLAST of Carg16498 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BR12\|A0A1S3BR12_CUCME	3.4e-97	95.72	guanine deaminase OS=Cucumis melo OX=3656 GN=LOC103492254 PE=4 SV=1	[more]
tr\|A0A0A0LZ82\|A0A0A0LZ82_CUCSA	7.2e-95	94.65	Guanine deaminase OS=Cucumis sativus OX=3659 GN=Csa_1G574840 PE=4 SV=1	[more]
tr\|A0A1Q3DD92\|A0A1Q3DD92_CEPFO	1.7e-91	90.81	dCMP_cyt_deam_1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=...	[more]
tr\|A0A2R6R1G1\|A0A2R6R1G1_ACTCH	3.7e-91	90.81	Guanine deaminase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc1...	[more]
tr\|A0A2P4MYN7\|A0A2P4MYN7_QUESU	3.1e-90	88.11	Guanine deaminase OS=Quercus suber OX=58331 GN=CFP56_49720 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0016787	hydrolase activity
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016193	Cytidine_deaminase-like
IPR016192	APOBEC/CMP_deaminase_Zn-bd
IPR002125	CMP_dCMP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16498-RA	Carg16498-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminase domain	PFAM	PF00383	dCMP_cyt_deam_1	coord: 32..130 e-value: 3.4E-24 score: 84.6
IPR002125	Cytidine and deoxycytidylate deaminase domain	PROSITE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 30..144 score: 24.103
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 31..186 e-value: 2.7E-47 score: 162.4
None	No IPR available	PANTHER	PTHR44192:SF1	CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN-RELATED	coord: 5..187
None	No IPR available	PANTHER	PTHR44192	FAMILY NOT NAMED	coord: 5..187
None	No IPR available	CDD	cd01285	nucleoside_deaminase	coord: 36..143 e-value: 4.21629E-36 score: 122.726
IPR016192	APOBEC/CMP deaminase, zinc-binding	PROSITE	PS00903	CYT_DCMP_DEAMINASES_1	coord: 82..119
IPR016193	Cytidine deaminase-like	SUPERFAMILY	SSF53927	Cytidine deaminase-like	coord: 23..145

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16498	ClCG03G016230	Watermelon (Charleston Gray)	carwcgB0891
Carg16498	CmaCh11G009990	Cucurbita maxima (Rimu)	carcmaB1252
Carg16498	CmoCh11G010170	Cucurbita moschata (Rifu)	carcmoB1222
Carg16498	Cp4.1LG04g01790	Cucurbita pepo (Zucchini)	carcpeB1261

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16498	Cucumber (Gy14) v2	carcgybB0900
Carg16498	Cucumber (Gy14) v1	carcgyB1030
Carg16498	Wild cucumber (PI 183967)	carcpiB0950
Carg16498	Cucumber (Chinese Long) v2	carcuB0928
Carg16498	Cucumber (Chinese Long) v3	carcucB0950
Carg16498	Bottle gourd (USVL1VR-Ls)	carlsiB831
Carg16498	Melon (DHL92) v3.5.1	carmeB0897
Carg16498	Melon (DHL92) v3.6.1	carmedB0905
Carg16498	Watermelon (97103) v1	carwmB0911
Carg16498	Watermelon (97103) v2	carwmbB0957
Carg16498	Wax gourd	carwgoB1056