Cp4.1LG04g01790 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g01790
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Guanine deaminase
Location	Cp4.1LG04 : 352612 .. 355355 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGGGAGGATGAATTTTATAAGAGAGGCGCGTTGGACGACTTTTATCCTTCAGTTTCATATTCTTTATTTTCTTTTCTTTTTCTCTCTCTTCTGCTGCTCTCTTCTTCCAGTTCTTCATTCATTGTCTCCCAACATTATTTATACACCTCCATTTCTTGCTTCTCTTCTGCACTTCTTCCTCTCTCGATCCCCATCCCTAAATCCCTATCCTCATCATGGCTGATTCTTCTACTGGTAATCGCTTCATTCTCCTCCTCCTTCTTTCCGATCATTCCCCGCATTCCCTTTTCGCCCAATGTGAATTCGGATCGGATGATTCTTTATTTTAATTACCTGTTCTGTAATCCATGTTGTTTTGTGTTTTTTTTTCTTCTCCGATCTCTCTGGATTCTTTGTCCTGATTTTGCATGAAGTCATTGATTCCGCATCGGGAGGGTATTTCTATGTTTGCATGATTTGGGTTTTTTTTTTTCTTTTTCGGGGAGAGTTGTTTGATCTTAGAGGTTTGAAATCGAACAGTTTTTTGGTGTTGATTTGTGAAATTAGGATGAATTTCGTCTCGGGATTTGGAAATTTTAGCTCGTTATTAGAGACGTGGTTGATGATGCTTCCTAATTGTTCGTTATTCTGCTTTTGGAATTTCCAGACCCGGGTCAACTATGAACTATTTTCTAATTTTGCGTATTTCTACGTTCTATTTTTGTTGTTCATCTGATTCTGAATCTGTATGTTTTCGTTTTATTTTTCTTTTTCTCTAGCCTGGAAGATCAATGAATAAGATTCATTCTGTTGTATTATTGATTTTGTATTTCTTCCTTATTTTCAGTGGTGGAAGCCATAGATGGAACTATCTCCGTAGCATCTGCATTTTCTTGTCATCAAGAAGGTACTAACATAACAACTCGCTTTCCATTTTTTATTAATTTGTTTTCATGTTTTTGATTTGTACATTTCTTATTTAATATTTCCTTTTGCCTTTTTCCCATCAAAACTCAAGGGAGAATAGATCCTTTTCTCATATTTAAATTTTCTGTTACATTTAGGGCCCTTAATATCTACATGTAATTATCAATATTGTTCTTGTTCTTGTCTGTCTTGGATGATTGGTCCAAATTGATATAACTTCCCCTGGCCTTTAGATCAGTGAAGTTCTAGAATTTTGATCCCTTTTCTTCATGGGTTTATGATTTCTTATGGATTTGGTATAATCTATTTTGTTGCCATTGTAATATGTTTCACTTGAGAGATCTTCAGTTCAAAATCATCCTGTCTGAAAGTAAAGTTCTGTTTAGGGAGAGATTTTGTCTATAGGAATCTATCCATTGCTTTGCTATGAGCATTTGTTTTGTTCATCATTTAATTCGAAGCCGAAATGAACAAATTGTCCGAGCTTTAACAATATTCCATTGATGTTTTCATGTTTAAATTAGCTGTACAAGATAGAGACTACAAGTTCTTGACTCAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGCCCTTTTGGAGCAGTTGTTGTTCATAACGATGAAGTAGTTGTGAGCTGTCACAACATGGTCTTGAGAAACACTGATCCTACAGCACATGCTGAAGTCACTGCAGTTCGGGAGGTCGGTATAAATCATTCTTAGTTTTCTTGAAGTACTTTGCATAAAAACAAGTTAATCTTGACATTGGAAGTGAAAAAGTCATTTGATCATGAAATTATGTGTTTGGTTAGTCCTGATTATGGAATAATATGAGTACCAAGATCGATAGAACTGATACCCTCAAAGTTTTTAAAACGCCTCTGCTAGGGAGAGGTTTCCACACCCTTGTAAAGAATGCTTTGTTCTCTTCTCCAACCGATGTGAGATCTCACATTCCACCTCCCCATGGGGCCCAACGAGCTTCATTCTCCTCTCCCACCGATGTGGGATCTCATAGAACTTATCGGCCACAATATCCTTATGTTTTCGTGTCCATTTTCCTTTCCAAAAGCTTTGATCTACTTTTCTTATTGACATAATGTTATTCGTTATATATTCGAACTGCAATCTGCAAATACATCTCCTTGTGAGCTGTTGACTTAAATGCAATTCATGACGACTTTCCTCTTCTATAGGCCTGCAAAAAACTCGGCCAAATCGAACTTTCAGACTGTGAGATCTATGCATCGTGCGAGCCATGTCCAATGTGCTTCGGTGCCATCCATCTTTCAAGAATTAAGGTTTGTGGTTGGAATTAGTCATTAATCATCGTGCTCGTGTTCTTGGTTTCTTATCGTTTACCTGGAAAACAACAGAGATTGGTGTACGGAGCGAAAGCAGAAGCTGCAATAGCGATCGGGTTCGATGATTTCATAGCTGATGCCATAAGGGGGACTGGGTTTTATCAGAAGGCTCACCTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTTATTGCTGAGCAAGTGTTTGAGAAAACAAAGGCAAAATTTCAATTGTACTGAATTTGCATCATCCATCCATCCTTTGTGTTAAAATAAATAAATTATCAACTGTTCATATATCCTTTATCCTAAATTCATGGAACTATCATGCAGTTGTAGCTTTCCTTTTTAACTTTCAATTAACACAGCTTCTGTATCTTCGTCTTCAAGAAATGGTTCACTTTATTATATAAATTCTGTATTTTATTACATGTATCCAATATTTTCTTTCGAATTTCGTAAAATATTCTAATAAAGTTAATAATATTTCGTAAACAA

mRNA sequence

GAGGGGAGGATGAATTTTATAAGAGAGGCGCGTTGGACGACTTTTATCCTTCAGTTTCATATTCTTTATTTTCTTTTCTTTTTCTCTCTCTTCTGCTGCTCTCTTCTTCCAGTTCTTCATTCATTGTCTCCCAACATTATTTATACACCTCCATTTCTTGCTTCTCTTCTGCACTTCTTCCTCTCTCGATCCCCATCCCTAAATCCCTATCCTCATCATGGCTGATTCTTCTACTGCTGTACAAGATAGAGACTACAAGTTCTTGACTCAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGCCCTTTTGGAGCAGTTGTTGTTCATAACGATGAAGTAGTTGTGAGCTGTCACAACATGGTCTTGAGAAACACTGATCCTACAGCACATGCTGAAGTCACTGCAGTTCGGGAGGCCTGCAAAAAACTCGGCCAAATCGAACTTTCAGACTGTGAGATCTATGCATCGTGCGAGCCATGTCCAATGTGCTTCGGTGCCATCCATCTTTCAAGAATTAAGAGATTGGTGTACGGAGCGAAAGCAGAAGCTGCAATAGCGATCGGGTTCGATGATTTCATAGCTGATGCCATAAGGGGGACTGGGTTTTATCAGAAGGCTCACCTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTTATTGCTGAGCAAGTGTTTGAGAAAACAAAGGCAAAATTTCAATTGTACTGAATTTGCATCATCCATCCATCCTTTGTGTTAAAATAAATAAATTATCAACTGTTCATATATCCTTTATCCTAAATTCATGGAACTATCATGCAGTTGTAGCTTTCCTTTTTAACTTTCAATTAACACAGCTTCTGTATCTTCGTCTTCAAGAAATGGTTCACTTTATTATATAAATTCTGTATTTTATTACATGTATCCAATATTTTCTTTCGAATTTCGTAAAATATTCTAATAAAGTTAATAATATTTCGTAAACAA

Coding sequence (CDS)

ATGGCTGATTCTTCTACTGCTGTACAAGATAGAGACTACAAGTTCTTGACTCAAGCAGTTGAAGAGGCTTACAAAGGAGTTGAGTGTGGAGATGGAGGCCCTTTTGGAGCAGTTGTTGTTCATAACGATGAAGTAGTTGTGAGCTGTCACAACATGGTCTTGAGAAACACTGATCCTACAGCACATGCTGAAGTCACTGCAGTTCGGGAGGCCTGCAAAAAACTCGGCCAAATCGAACTTTCAGACTGTGAGATCTATGCATCGTGCGAGCCATGTCCAATGTGCTTCGGTGCCATCCATCTTTCAAGAATTAAGAGATTGGTGTACGGAGCGAAAGCAGAAGCTGCAATAGCGATCGGGTTCGATGATTTCATAGCTGATGCCATAAGGGGGACTGGGTTTTATCAGAAGGCTCACCTGGAAATCAAGAAAGCAGATGGGAATGGTGCTGTTATTGCTGAGCAAGTGTTTGAGAAAACAAAGGCAAAATTTCAATTGTACTGA

Protein sequence

MADSSTAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY

Homology

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BLAST of Cp4.1LG04g01790 vs. Swiss-Prot
Match: GUAD_BACSU (Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-27
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 1


Query: 15  FLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 74
           FL +AV  A +GV  G GGPFGAV+V +  ++    N V  + DPTAHAEVTA+R+ACK 
Sbjct: 6   FLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKV 65

Query: 75  LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDD 124
           LG  +L DC +Y SCEPCPMC GAI+ +R K + Y A+   A   GFDD
Sbjct: 66  LGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDD 114

[Close]

BLAST of Cp4.1LG04g01790 vs. Swiss-Prot
Match: TADA_STAAM (tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tadA PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-18
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 1


Query: 12  DYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREA 71
           D  F+T A+EEA K  + G+  P GA++  +DEV+   HN+      PTAHAE  A+  A
Sbjct: 4   DIYFMTLAIEEAKKAAQLGEV-PIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERA 63

Query: 72  CKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 112
            K LG   L  C +Y + EPC MC G I +SRI R+VYGA
Sbjct: 64  AKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGA 102

[Close]

BLAST of Cp4.1LG04g01790 vs. Swiss-Prot
Match: TADA_AQUAE (tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) GN=tadA PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 1


Query: 15  FLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREACKK 74
           FL  A+ EA +  E G+  P GA++V   E++   HN V    DPTAHAE+ A++EAC++
Sbjct: 6   FLKVALREAKRAFEKGEV-PVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRR 65

Query: 75  LGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 112
           L    L  CE+Y + EPC MC  A+ LSRI+++++ A
Sbjct: 66  LNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSA 101

[Close]

BLAST of Cp4.1LG04g01790 vs. Swiss-Prot
Match: TADA_BACSU (tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) GN=tadA PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 1


Query: 11  RDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVRE 70
           +D  ++ +A++EA K  E G+  P GAV+V N E++   HN+        AHAE+  + E
Sbjct: 3   QDELYMKEAIKEAKKAEEKGEV-PIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDE 62

Query: 71  ACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 112
           ACK LG   L    +Y + EPCPMC GA+ LSR++++V+GA
Sbjct: 63  ACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGA 102

[Close]

BLAST of Cp4.1LG04g01790 vs. Swiss-Prot
Match: TADA_ARATH (tRNA(adenine(34)) deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-14
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 12   DYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREA 71
            D  F+ +A+ EA K  +  +  P GAV+VH+ +++   +N+V    D TAHAE+  +RE 
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREG 1169

Query: 72   CKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 112
             K L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1170 SKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

[Close]

BLAST of Cp4.1LG04g01790 vs. TrEMBL
Match: A0A0A0LZ82_CUCSA (Guanine deaminase OS=Cucumis sativus GN=Csa_1G574840 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 8.0e-84
Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV NDEVVVSCHNMV RNTDPTAHAEVT
Sbjct: 25  AVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVT 84

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           AVREACKKLG+IELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIA+GFDDFIA
Sbjct: 85  AVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGFDDFIA 144

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTK KFQLY
Sbjct: 145 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQLY 185

[Close]

BLAST of Cp4.1LG04g01790 vs. TrEMBL
Match: B4FPE0_MAIZE (Cytidine/deoxycytidylate deaminase family protein OS=Zea mays GN=LOC100272576 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.8e-82
Identity = 145/166 (87.35%), Postives = 162/166 (97.59%), Query Frame = 1


Query: 2   ADSSTAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTA 61
           A    AVQDRD+KFL++AVEEAY+GV+CGDGGPFGAVVVHNDEV+VSCHNMVL+NTDPTA
Sbjct: 21  AGHQEAVQDRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVHNDEVIVSCHNMVLKNTDPTA 80

Query: 62  HAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 121
           HAEVTA+REACKKLG+IELSDCEIYASCEPCPMCFGA+HLSRIKRLVYGAKAEAAIAIGF
Sbjct: 81  HAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140

Query: 122 DDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DDFIADA+RGTG+YQKA++EIK+ADGNGA+IAEQVFEKTKAKFQ+Y
Sbjct: 141 DDFIADALRGTGYYQKANMEIKQADGNGAMIAEQVFEKTKAKFQMY 186

[Close]

BLAST of Cp4.1LG04g01790 vs. TrEMBL
Match: D7TUN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01610 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-81
Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 1


Query: 2   ADSSTAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTA 61
           A     VQDRDYKFLT AVEEAYKGVECGDGGPFGAVVVHNDEV+VSCHNMVL NTDPTA
Sbjct: 21  AGHQEVVQDRDYKFLTAAVEEAYKGVECGDGGPFGAVVVHNDEVLVSCHNMVLTNTDPTA 80

Query: 62  HAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 121
           HAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF
Sbjct: 81  HAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140

Query: 122 DDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DDFIADA+RGTGFYQKAHLEIK+ADG+GA IAEQVFE TKAKF++Y
Sbjct: 141 DDFIADALRGTGFYQKAHLEIKRADGDGAEIAEQVFENTKAKFRMY 186

[Close]

BLAST of Cp4.1LG04g01790 vs. TrEMBL
Match: A0A151U597_CAJCA (Guanine deaminase OS=Cajanus cajan GN=KK1_007123 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.2e-81
Identity = 149/161 (92.55%), Postives = 157/161 (97.52%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AVQDRD+KFLT+AVEEAYKGVECGDGGPFGAVVV NDEVVVSCHNMVLRNTDPTAHAEVT
Sbjct: 30  AVQDRDHKFLTKAVEEAYKGVECGDGGPFGAVVVRNDEVVVSCHNMVLRNTDPTAHAEVT 89

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           A+REAC+KL QIEL+DCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA
Sbjct: 90  AIREACQKLNQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 149

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DA+RGTGFYQKA LEIKKADG+GAVIAEQVFEKTKAKF +Y
Sbjct: 150 DALRGTGFYQKAQLEIKKADGSGAVIAEQVFEKTKAKFPMY 190

[Close]

BLAST of Cp4.1LG04g01790 vs. TrEMBL
Match: B9MZH3_POPTR (Cytidine/deoxycytidylate deaminase family protein OS=Populus trichocarpa GN=POPTR_0005s05110g PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.9e-81
Identity = 146/161 (90.68%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AVQDRD+KFLT+AVEEAYKGVECGDGGPFGAVVV NDE+++SCHNMVL+NTDPTAHAEVT
Sbjct: 24  AVQDRDHKFLTRAVEEAYKGVECGDGGPFGAVVVQNDEIIMSCHNMVLKNTDPTAHAEVT 83

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           AVREACKKL +IELSDCEIYASCEPCPMCFGAIHLSR+KRLVYGA+AEAAIAIGFDDFIA
Sbjct: 84  AVREACKKLNRIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAEAEAAIAIGFDDFIA 143

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DA+RGTGFYQKAHLEIKKADG+GAVIAEQVFEKTKAKF +Y
Sbjct: 144 DALRGTGFYQKAHLEIKKADGSGAVIAEQVFEKTKAKFTMY 184

[Close]

BLAST of Cp4.1LG04g01790 vs. TAIR10
Match: AT5G28050.2 (AT5G28050.2 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 292.4 bits (747), Expect = 1.8e-79
Identity = 138/161 (85.71%), Postives = 151/161 (93.79%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AV D D+KFLTQAVEEAYKGV+CGDGGPFGAV+VHN+EVV SCHNMVL+ TDPTAHAEVT
Sbjct: 44  AVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVT 103

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           A+REACKKL +IELS+CEIYASCEPCPMCFGAIHLSR+KRLVYGAKAEAAIAIGFDDFIA
Sbjct: 104 AIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGFDDFIA 163

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DA+RGTG YQK+ LEIKKADGNGA IAEQVF+ TK KF+LY
Sbjct: 164 DALRGTGVYQKSSLEIKKADGNGAAIAEQVFQNTKEKFRLY 204

[Close]

BLAST of Cp4.1LG04g01790 vs. TAIR10
Match: AT3G05300.1 (AT3G05300.1 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 161.0 bits (406), Expect = 6.3e-40
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 1


Query: 52  MVLRNTDPTAHAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 111
           MV +  DPTAHAEV A+REACKKL +I+LS+CEIYASCEPCPMCFGAIHLSR+KRLVY A
Sbjct: 1   MVFKYKDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60

Query: 112 KAEAAIAIGFDDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQL 167
           K EAA+AIGF+  +AD +RG G Y  ++LEI K D     IAEQVF+ TK KF L
Sbjct: 61  KVEAALAIGFNRILADGVRGVGCYHNSNLEITKLD---LSIAEQVFQNTKGKFSL 112

[Close]

BLAST of Cp4.1LG04g01790 vs. TAIR10
Match: AT1G68720.1 (AT1G68720.1 tRNA arginine adenosine deaminase)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 12   DYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVTAVREA 71
            D  F+ +A+ EA K  +  +  P GAV+VH+ +++   +N+V    D TAHAE+  +RE 
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREG 1169

Query: 72   CKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 112
             K L    L+D  +Y + EPCPMC GAI  +R+  LV+GA
Sbjct: 1170 SKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208

[Close]

BLAST of Cp4.1LG04g01790 vs. NCBI nr
Match: gi|449435770|ref|XP_004135667.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV NDEVVVSCHNMV RNTDPTAHAEVT
Sbjct: 25  AVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVT 84

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           AVREACKKLG+IELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIA+GFDDFIA
Sbjct: 85  AVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGFDDFIA 144

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTK KFQLY
Sbjct: 145 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQLY 185

[Close]

BLAST of Cp4.1LG04g01790 vs. NCBI nr
Match: gi|659099781|ref|XP_008450773.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AVQDRD+KFLTQAVEEAY+GVECGDGGPFGAVVV NDEVVVSCHNMV RNTDPTAHAEVT
Sbjct: 27  AVQDRDHKFLTQAVEEAYQGVECGDGGPFGAVVVRNDEVVVSCHNMVRRNTDPTAHAEVT 86

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           AVREACKKLG+IELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIA+GFDDFIA
Sbjct: 87  AVREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGFDDFIA 146

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTK KFQLY
Sbjct: 147 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKEKFQLY 187

[Close]

BLAST of Cp4.1LG04g01790 vs. NCBI nr
Match: gi|695012758|ref|XP_009393146.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 312.0 bits (798), Expect = 6.3e-82
Identity = 146/161 (90.68%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 7   AVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTAHAEVT 66
           AVQDRD+KFL++AVEEAY GVECGDGGPFGAVVVHNDE+VVSCHNMVL+NTDPTAHAEV 
Sbjct: 25  AVQDRDHKFLSKAVEEAYHGVECGDGGPFGAVVVHNDEIVVSCHNMVLKNTDPTAHAEVA 84

Query: 67  AVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIA 126
           A+REACKKLG+IELSDCEIYASCEPCPMCFGAIHLSR+KRLVYGAKAEAAIAIGFDDFIA
Sbjct: 85  AIREACKKLGKIELSDCEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGFDDFIA 144

Query: 127 DAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DA+RGTGFYQKAHLEIK+ADGNGA+IAEQVFEKTK KFQ+Y
Sbjct: 145 DALRGTGFYQKAHLEIKRADGNGAIIAEQVFEKTKEKFQMY 185

[Close]

BLAST of Cp4.1LG04g01790 vs. NCBI nr
Match: gi|226504812|ref|NP_001140513.1| (putative cytidine/deoxycytidylate deaminase family protein [Zea mays])

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 145/166 (87.35%), Postives = 162/166 (97.59%), Query Frame = 1


Query: 2   ADSSTAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTA 61
           A    AVQDRD+KFL++AVEEAY+GV+CGDGGPFGAVVVHNDEV+VSCHNMVL+NTDPTA
Sbjct: 21  AGHQEAVQDRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVHNDEVIVSCHNMVLKNTDPTA 80

Query: 62  HAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 121
           HAEVTA+REACKKLG+IELSDCEIYASCEPCPMCFGA+HLSRIKRLVYGAKAEAAIAIGF
Sbjct: 81  HAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140

Query: 122 DDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DDFIADA+RGTG+YQKA++EIK+ADGNGA+IAEQVFEKTKAKFQ+Y
Sbjct: 141 DDFIADALRGTGYYQKANMEIKQADGNGAMIAEQVFEKTKAKFQMY 186

[Close]

BLAST of Cp4.1LG04g01790 vs. NCBI nr
Match: gi|225451245|ref|XP_002276494.1| (PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Vitis vinifera])

HSP 1 Score: 310.5 bits (794), Expect = 1.8e-81
Identity = 149/166 (89.76%), Postives = 156/166 (93.98%), Query Frame = 1


Query: 2   ADSSTAVQDRDYKFLTQAVEEAYKGVECGDGGPFGAVVVHNDEVVVSCHNMVLRNTDPTA 61
           A     VQDRDYKFLT AVEEAYKGVECGDGGPFGAVVVHNDEV+VSCHNMVL NTDPTA
Sbjct: 21  AGHQEVVQDRDYKFLTAAVEEAYKGVECGDGGPFGAVVVHNDEVLVSCHNMVLTNTDPTA 80

Query: 62  HAEVTAVREACKKLGQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 121
           HAEVTA+REACKKL QIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF
Sbjct: 81  HAEVTAIREACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140

Query: 122 DDFIADAIRGTGFYQKAHLEIKKADGNGAVIAEQVFEKTKAKFQLY 168
           DDFIADA+RGTGFYQKAHLEIK+ADG+GA IAEQVFE TKAKF++Y
Sbjct: 141 DDFIADALRGTGFYQKAHLEIKRADGDGAEIAEQVFENTKAKFRMY 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g01790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GUAD_BACSU	4.4e-27	53.21	Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1	[more]
TADA_STAAM	4.9e-18	46.00	tRNA-specific adenosine deaminase OS=Staphylococcus aureus (strain Mu50 / ATCC 7...	[more]
TADA_AQUAE	1.6e-16	43.30	tRNA-specific adenosine deaminase OS=Aquifex aeolicus (strain VF5) GN=tadA PE=1 ...	[more]
TADA_BACSU	2.1e-16	41.58	tRNA-specific adenosine deaminase OS=Bacillus subtilis (strain 168) GN=tadA PE=1...	[more]
TADA_ARATH	1.9e-14	41.00	tRNA(adenine(34)) deaminase, chloroplastic OS=Arabidopsis thaliana GN=TADA PE=1 ...	[more]

BLAST of Cp4.1LG04g01790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ82_CUCSA	8.0e-84	95.65	Guanine deaminase OS=Cucumis sativus GN=Csa_1G574840 PE=4 SV=1	[more]
B4FPE0_MAIZE	9.8e-82	87.35	Cytidine/deoxycytidylate deaminase family protein OS=Zea mays GN=LOC100272576 PE...	[more]
D7TUN8_VITVI	1.3e-81	89.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01610 PE=4 SV=...	[more]
A0A151U597_CAJCA	2.2e-81	92.55	Guanine deaminase OS=Cajanus cajan GN=KK1_007123 PE=4 SV=1	[more]
B9MZH3_POPTR	2.9e-81	90.68	Cytidine/deoxycytidylate deaminase family protein OS=Populus trichocarpa GN=POPT...	[more]

BLAST of Cp4.1LG04g01790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28050.2	1.8e-79	85.71	Cytidine/deoxycytidylate deaminase family protein	[more]
AT3G05300.1	6.3e-40	67.83	Cytidine/deoxycytidylate deaminase family protein	[more]
AT1G68720.1	1.1e-15	41.00	tRNA arginine adenosine deaminase	[more]

BLAST of Cp4.1LG04g01790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435770\|ref\|XP_004135667.1\|	1.2e-83	95.65	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis sativus]	[more]
gi\|659099781\|ref\|XP_008450773.1\|	1.2e-83	95.65	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Cucumis melo]	[more]
gi\|695012758\|ref\|XP_009393146.1\|	6.3e-82	90.68	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic-like [Musa acuminata subsp...	[more]
gi\|226504812\|ref\|NP_001140513.1\|	1.4e-81	87.35	putative cytidine/deoxycytidylate deaminase family protein [Zea mays]	[more]
gi\|225451245\|ref\|XP_002276494.1\|	1.8e-81	89.76	PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0016787	hydrolase activity
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016193	Cytidine_deaminase-like
IPR016192	APOBEC/CMP_deaminase_Zn-bd
IPR002125	CMP_dCMP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006152	purine nucleoside catabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0047974	guanosine deaminase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008892	guanine deaminase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g01790.1	Cp4.1LG04g01790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PFAM	PF00383	dCMP_cyt_deam_1	coord: 12..110 score: 2.4
IPR002125	Cytidine and deoxycytidylate deaminases, zinc-binding	PROFILE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 10..124 score: 24
IPR016192	APOBEC/CMP deaminase, zinc-binding	PROSITE	PS00903	CYT_DCMP_DEAMINASES_1	coord: 62..99 scor
IPR016193	Cytidine deaminase-like	unknown	SSF53927	Cytidine deaminase-like	coord: 7..125 score: 5.35
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 6..129 score: 9.2
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 7..135 score: 2.7
None	No IPR available	PANTHER	PTHR11079:SF90	SUBFAMILY NOT NAMED	coord: 7..135 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g01790	CmaCh11G009990	Cucurbita maxima (Rimu)	cmacpeB147
Cp4.1LG04g01790	CmoCh11G010170	Cucurbita moschata (Rifu)	cmocpeB127
Cp4.1LG04g01790	Carg16498	Silver-seed gourd	carcpeB1261

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g01790	Cucurbita pepo (Zucchini)	cpecpeB504
Cp4.1LG04g01790	Cucumber (Gy14) v1	cgycpeB0769
Cp4.1LG04g01790	Wild cucumber (PI 183967)	cpecpiB648
Cp4.1LG04g01790	Cucumber (Chinese Long) v2	cpecuB645
Cp4.1LG04g01790	Bottle gourd (USVL1VR-Ls)	cpelsiB561
Cp4.1LG04g01790	Watermelon (Charleston Gray)	cpewcgB605
Cp4.1LG04g01790	Watermelon (97103) v1	cpewmB649
Cp4.1LG04g01790	Melon (DHL92) v3.5.1	cpemeB619
Cp4.1LG04g01790	Cucumber (Gy14) v2	cgybcpeB119
Cp4.1LG04g01790	Melon (DHL92) v3.6.1	cpemedB731
Cp4.1LG04g01790	Cucumber (Chinese Long) v3	cpecucB0806
Cp4.1LG04g01790	Wax gourd	cpewgoB0899