Carg19249-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19249-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein
Location	Cucurbita_argyrosperma_scaffold_099 : 487412 .. 489406 (+)
Sequence length	1995

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGCCCAGTCGCAGTTTCGACGCCTTCTTCAGCCCCTTACATGCACTTGCTGTGCGATCGCTCTCCACGAAGACTTCTTCTGCTTCTTTACAAGAATTTACCAGCCTCTGCAGTGGCGGACGCATAACACAAGCCTATGAGAGGTTCAAATCCGAGATATGGTCAGACCCATCTCTTTTTTCTCATCTGCTCCAATCGTGCATAAAACTAGGCTCACTTTTTGGAGGAGAACAGGTCCATTCTTTGGTCATTACATCTGGGTGTGCCAATGACAAGTTCATTTCCAATCACCTTCTGAACTTGTACTCCAAATTAGGAAATTTGAAGTCTTCTTTGGTGCTGTTTAGTCATATGCCACGAAGAAATATAATGTCATATAACATTTTGATTAATGGGTACTTGCAGCTTGGGGATTTGGAAAGTGCCCAGAAGCTGTTTGATGAAATGTCTGAAAGAAACATTGCCACATGGAATGCGATGATCACAGGTCTAACTCAGTTTGAATATAACGAGCAGGCTTTAGGTTTGTTTAGAGAAATGTATGGATTGGGTATTTTGCCTGATGAGTTCACACTAGGCAGTGTACTTAGAGGGTGCGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTGATGAAATGTGGATTTGAACTGAATTTGGTCGTGGGCAGCTCTCTAGCTCATATGTATATGAAGTCTGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGCAATGTAGTTGCTTGGAATACTCTTATAGCTGGAAAAGCTCAAAACGGGTGTTCAGAAGAAGTCTTGAACCAGTACAATATGATGAAAATGGCAGGCTTTCGACCCGATAAAATTACATTTGTGAGTGTAATAAGCGCGTGTTCGGAGCTTGCGACGTTAGGACAAGGCCAGCAGATCCATGCTGAAGTGATCAAAGCCGGAGCTGGTTCAGTTGTAGCAGTTGTCAGCTCCTTGATTAGCATGTATTCACGGTCTGGATGTCTAGAGGACTCTGTGAAAACCTTTGTGGATCGTGAAGATGCTGATGTTGTGTTATGGAGTGCTATGATTGCAGCTTATGGATTCCATGGGAGGGGAGAGGAAGCTATTGAGCTTTTTCACCAAATGGAAGAGTTGAAAATGGAGGCTAATGAAGTGACCTTCTTGAGTCTCCTTTATGCTTGTAGTCACTGTGGATTGAAGGAGAAAGGAACTGAGTATTTAGATTTGATGGTGGAGCAGTATAAACTCAAGCCTAGAATCGAACACTACACGTGTGTGGTCGATCTGCTCGGTCGGGCTGGCCGTTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTAAAAGCAGATGGCATCATATGGAAAACTTTATTATCAGCCTGCAAACTCCACAAGAACGCAGAAATGGCAAAACGAATTTCTGAAGAAATTCTGAAGCTTGATCCTCTGGATGCTGCTTCCTACGTGCTGCTTTCGAACATCCATGCCTCTGCTAGAAATTGGCCCGACGTTTCCGAGATTAGGAAAGCCATGAGAGATCGGAACGTCAAGAAGGAGCCCGGCATAAGTTGGCTAGAACTCAAAAACTTGGTTCACCAATTTAGTATGGGTGACAAATCTCATCCACAGTACCTCGAGATCGACTCGTATTTGAAAGAACTAATGTCTGAAATGAAACTACATGGTTACGTGCCAGACATAGGCTCGGTTTTGCACGACATGGACAACGAAGAAAAGGAATACAATTTAGCTCATCACAGTGAGAAGTTTGCCATTGCTTTTGCACTGATGAACATTCCCGAGGGTGTCCCAATAAGAGTGATGAAGAACTTGCGGGTCTGCAATGACTGTCATGAAGCCATTAAGTGCATATCAAAGATCAGAAACAGAGAGATTATTGTAAGAGATACAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

mRNA sequence

ATGGGCAAGCCCAGTCGCAGTTTCGACGCCTTCTTCAGCCCCTTACATGCACTTGCTGTGCGATCGCTCTCCACGAAGACTTCTTCTGCTTCTTTACAAGAATTTACCAGCCTCTGCAGTGGCGGACGCATAACACAAGCCTATGAGAGGTTCAAATCCGAGATATGGTCAGACCCATCTCTTTTTTCTCATCTGCTCCAATCGTGCATAAAACTAGGCTCACTTTTTGGAGGAGAACAGGTCCATTCTTTGGTCATTACATCTGGGTGTGCCAATGACAAGTTCATTTCCAATCACCTTCTGAACTTGTACTCCAAATTAGGAAATTTGAAGTCTTCTTTGGTGCTGTTTAGTCATATGCCACGAAGAAATATAATGTCATATAACATTTTGATTAATGGGTACTTGCAGCTTGGGGATTTGGAAAGTGCCCAGAAGCTGTTTGATGAAATGTCTGAAAGAAACATTGCCACATGGAATGCGATGATCACAGGTCTAACTCAGTTTGAATATAACGAGCAGGCTTTAGGTTTGTTTAGAGAAATGTATGGATTGGGTATTTTGCCTGATGAGTTCACACTAGGCAGTGTACTTAGAGGGTGCGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTGATGAAATGTGGATTTGAACTGAATTTGGTCGTGGGCAGCTCTCTAGCTCATATGTATATGAAGTCTGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGCAATGTAGTTGCTTGGAATACTCTTATAGCTGGAAAAGCTCAAAACGGGTGTTCAGAAGAAGTCTTGAACCAGTACAATATGATGAAAATGGCAGGCTTTCGACCCGATAAAATTACATTTGTGAGTGTAATAAGCGCGTGTTCGGAGCTTGCGACGTTAGGACAAGGCCAGCAGATCCATGCTGAAGTGATCAAAGCCGGAGCTGGTTCAGTTGTAGCAGTTGTCAGCTCCTTGATTAGCATGTATTCACGGTCTGGATGTCTAGAGGACTCTGTGAAAACCTTTGTGGATCGTGAAGATGCTGATGTTGTGTTATGGAGTGCTATGATTGCAGCTTATGGATTCCATGGGAGGGGAGAGGAAGCTATTGAGCTTTTTCACCAAATGGAAGAGTTGAAAATGGAGGCTAATGAAGTGACCTTCTTGAGTCTCCTTTATGCTTGTAGTCACTGTGGATTGAAGGAGAAAGGAACTGAGTATTTAGATTTGATGGTGGAGCAGTATAAACTCAAGCCTAGAATCGAACACTACACGTGTGTGGTCGATCTGCTCGGTCGGGCTGGCCGTTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTAAAAGCAGATGGCATCATATGGAAAACTTTATTATCAGCCTGCAAACTCCACAAGAACGCAGAAATGGCAAAACGAATTTCTGAAGAAATTCTGAAGCTTGATCCTCTGGATGCTGCTTCCTACGTGCTGCTTTCGAACATCCATGCCTCTGCTAGAAATTGGCCCGACGTTTCCGAGATTAGGAAAGCCATGAGAGATCGGAACGTCAAGAAGGAGCCCGGCATAAGTTGGCTAGAACTCAAAAACTTGGTTCACCAATTTAGTATGGGTGACAAATCTCATCCACAGTACCTCGAGATCGACTCGTATTTGAAAGAACTAATGTCTGAAATGAAACTACATGGTTACGTGCCAGACATAGGCTCGGTTTTGCACGACATGGACAACGAAGAAAAGGAATACAATTTAGCTCATCACAGTGAGAAGTTTGCCATTGCTTTTGCACTGATGAACATTCCCGAGGGTGTCCCAATAAGAGTGATGAAGAACTTGCGGGTCTGCAATGACTGTCATGAAGCCATTAAGTGCATATCAAAGATCAGAAACAGAGAGATTATTGTAAGAGATACAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

Coding sequence (CDS)

ATGGGCAAGCCCAGTCGCAGTTTCGACGCCTTCTTCAGCCCCTTACATGCACTTGCTGTGCGATCGCTCTCCACGAAGACTTCTTCTGCTTCTTTACAAGAATTTACCAGCCTCTGCAGTGGCGGACGCATAACACAAGCCTATGAGAGGTTCAAATCCGAGATATGGTCAGACCCATCTCTTTTTTCTCATCTGCTCCAATCGTGCATAAAACTAGGCTCACTTTTTGGAGGAGAACAGGTCCATTCTTTGGTCATTACATCTGGGTGTGCCAATGACAAGTTCATTTCCAATCACCTTCTGAACTTGTACTCCAAATTAGGAAATTTGAAGTCTTCTTTGGTGCTGTTTAGTCATATGCCACGAAGAAATATAATGTCATATAACATTTTGATTAATGGGTACTTGCAGCTTGGGGATTTGGAAAGTGCCCAGAAGCTGTTTGATGAAATGTCTGAAAGAAACATTGCCACATGGAATGCGATGATCACAGGTCTAACTCAGTTTGAATATAACGAGCAGGCTTTAGGTTTGTTTAGAGAAATGTATGGATTGGGTATTTTGCCTGATGAGTTCACACTAGGCAGTGTACTTAGAGGGTGCGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTGATGAAATGTGGATTTGAACTGAATTTGGTCGTGGGCAGCTCTCTAGCTCATATGTATATGAAGTCTGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGCAATGTAGTTGCTTGGAATACTCTTATAGCTGGAAAAGCTCAAAACGGGTGTTCAGAAGAAGTCTTGAACCAGTACAATATGATGAAAATGGCAGGCTTTCGACCCGATAAAATTACATTTGTGAGTGTAATAAGCGCGTGTTCGGAGCTTGCGACGTTAGGACAAGGCCAGCAGATCCATGCTGAAGTGATCAAAGCCGGAGCTGGTTCAGTTGTAGCAGTTGTCAGCTCCTTGATTAGCATGTATTCACGGTCTGGATGTCTAGAGGACTCTGTGAAAACCTTTGTGGATCGTGAAGATGCTGATGTTGTGTTATGGAGTGCTATGATTGCAGCTTATGGATTCCATGGGAGGGGAGAGGAAGCTATTGAGCTTTTTCACCAAATGGAAGAGTTGAAAATGGAGGCTAATGAAGTGACCTTCTTGAGTCTCCTTTATGCTTGTAGTCACTGTGGATTGAAGGAGAAAGGAACTGAGTATTTAGATTTGATGGTGGAGCAGTATAAACTCAAGCCTAGAATCGAACACTACACGTGTGTGGTCGATCTGCTCGGTCGGGCTGGCCGTTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTAAAAGCAGATGGCATCATATGGAAAACTTTATTATCAGCCTGCAAACTCCACAAGAACGCAGAAATGGCAAAACGAATTTCTGAAGAAATTCTGAAGCTTGATCCTCTGGATGCTGCTTCCTACGTGCTGCTTTCGAACATCCATGCCTCTGCTAGAAATTGGCCCGACGTTTCCGAGATTAGGAAAGCCATGAGAGATCGGAACGTCAAGAAGGAGCCCGGCATAAGTTGGCTAGAACTCAAAAACTTGGTTCACCAATTTAGTATGGGTGACAAATCTCATCCACAGTACCTCGAGATCGACTCGTATTTGAAAGAACTAATGTCTGAAATGAAACTACATGGTTACGTGCCAGACATAGGCTCGGTTTTGCACGACATGGACAACGAAGAAAAGGAATACAATTTAGCTCATCACAGTGAGAAGTTTGCCATTGCTTTTGCACTGATGAACATTCCCGAGGGTGTCCCAATAAGAGTGATGAAGAACTTGCGGGTCTGCAATGACTGTCATGAAGCCATTAAGTGCATATCAAAGATCAGAAACAGAGAGATTATTGTAAGAGATACAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

Protein sequence

MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFREMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW

Homology

[Close]

BLAST of Carg19249-RA vs. NCBI nr
Match: XP_023553764.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 662/664 (99.70%), Postives = 663/664 (99.85%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS
Sbjct: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM
Sbjct: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNS 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGY+PDIGSVLHDMDNEEKEYNLAHHSEKF
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYMPDIGSVLHDMDNEEKEYNLAHHSEKF 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC
Sbjct: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249-RA vs. NCBI nr
Match: XP_022953052.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 661/664 (99.55%), Postives = 663/664 (99.85%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MG+PSRSFDA F+PLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS
Sbjct: 1   MGQPSRSFDALFNPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM
Sbjct: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC
Sbjct: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249-RA vs. NCBI nr
Match: XP_022969026.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima])

HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 654/664 (98.49%), Postives = 656/664 (98.80%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MGKPSRSFDA F+PLHAL VR LSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS
Sbjct: 1   MGKPSRSFDALFNPLHALTVRLLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCIKLGSLFGGEQVHSLVITSGCA DKFISNHLLNLYSKLGNLKSSLVLFS M
Sbjct: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCAYDKFISNHLLNLYSKLGNLKSSLVLFSQM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 XXXGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTF+DREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFLDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHK AEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKKAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC
Sbjct: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249-RA vs. NCBI nr
Match: XP_022147886.1 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Momordica charantia])

HSP 1 Score: 1092.8 bits (2825), Expect = 0.0e+00
Identity = 603/664 (90.81%), Postives = 632/664 (95.18%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MGKP  SF A F+PLHA AVR LSTKTSS  LQEFT+LC+GGRI QAYE FKSEIWSDPS
Sbjct: 1   MGKPILSFHALFNPLHAPAVRFLSTKTSSVYLQEFTNLCNGGRIRQAYESFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCI++GS+FGG+Q+HSLVITSGC+ DKFISNHLLNLYSKLG  K+SLVLFSHM
Sbjct: 61  LFSHLLQSCIEIGSIFGGKQLHSLVITSGCSQDKFISNHLLNLYSKLGQFKTSLVLFSHM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLG LPDEFTLGSVLRGCAGLRS+ AGQEVHACLMKCGFELNLVVGSS+AHMYMKSG
Sbjct: 181 XXXGLGFLPDEFTLGSVLRGCAGLRSIRAGQEVHACLMKCGFELNLVVGSSVAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEK+IKSMP RNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKVIKSMPTRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAE IKAGAGSVVAV+SSLISMYSRSGCL+DSVK F+DREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEAIKAGAGSVVAVISSLISMYSRSGCLDDSVKAFLDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEE IELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEVIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           ++YKLKPRIEHYTCVVDLLGRAGRLEEAE  IRSMPVKADGIIWKTLLSACK+HK AEMA
Sbjct: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEATIRSMPVKADGIIWKTLLSACKIHKKAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISE+ILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDR V+KEPGISWLELK+ 
Sbjct: 481 KRISEDILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRQVRKEPGISWLELKST 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQF+M DKSHP+YLEI+ YLKELM+EMKL GYVPDIGSVLHDMDNEEKEYNLAHHSEK 
Sbjct: 541 VHQFNMSDKSHPKYLEIELYLKELMAEMKLQGYVPDIGSVLHDMDNEEKEYNLAHHSEKL 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMN PE  PIRVMKNLRVC+DCH+AIKCISKIRNREIIVRD SRFHHF+DGECSC
Sbjct: 601 AIAFALMNTPESAPIRVMKNLRVCSDCHDAIKCISKIRNREIIVRDASRFHHFRDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249-RA vs. NCBI nr
Match: XP_008455289.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Cucumis melo])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 599/665 (90.08%), Postives = 629/665 (94.59%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTK-TSSASLQEFTSLCSGGRITQAYERFKSEIWSDP 60
           MGKPS SF+AF +P ++  VRSLS K +SSASLQEFTSLC+ GRI QAY+ FK EIWSDP
Sbjct: 1   MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60

Query: 61  SLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSH 120
           SLFSHLLQSCIKLGSLFGG+QVHSL+ITSG + DKFISNHLLNLYSKLG  KSSLVLFS+
Sbjct: 61  SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNLYSKLGQFKSSLVLFSN 120

Query: 121 MPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           MPRRN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 MPRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
           XXXXGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 XXXXGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240

Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVI 300
           GSLSDGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300

Query: 301 SACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVV 360
           SACSELATLGQGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+K FVDRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360

Query: 361 LWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
           LWS+MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420

Query: 421 VEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
           V++YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480

Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 540
           AKRISEEI+KLDPLDAASYVLLSNIHASARNWP+VSEIRKAMRDRNV+KEPGISWLELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540

Query: 541 LVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEK 600
           LVHQFSMGDKSHPQY EID YLKELMSE+K HGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600

Query: 601 FAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECS 660
           FAIAFALMN  E VPIRVMKNLRVCNDCH AIKCIS+IRNREIIVRD SRFHHFKDGECS
Sbjct: 601 FAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECS 660

Query: 661 CGNYW 665
           CGNYW
Sbjct: 661 CGNYW 665

[Close]

BLAST of Carg19249-RA vs. TAIR10
Match: AT2G41080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 619.0 bits (1595), Expect = 3.4e-177
Identity = 315/565 (55.75%), Postives = 387/565 (68.50%), Query Frame = 0


Query: 101 LNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 160
           +++YSKLG+  S++ ++  M ++N MS                                 
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60

Query: 161 XXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKC 220
                                  GLG  PDE+TLGSV  G AGLRS+  GQ++H   +K 
Sbjct: 61  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120

Query: 221 GFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQY 280
           G EL+LVV SSLAHMYM++G L DGE +I+SMP+RN+VAWNTLI G AQNGC E VL  Y
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180

Query: 281 NMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRS 340
            MMK++G RP+KITFV+V+S+CS+LA  GQGQQIHAE IK GA SVVAVVSSLISMYS+ 
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240

Query: 341 GCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIELFHQM-EELKMEANEVTFLSL 400
           GCL D+ K F +RED D V+WS+MI+AYGFHG+G+EAIELF+ M E+  ME N       
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINXXXXXXX 300

Query: 401 LYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKA 460
                                  Y  KP ++HYTCVVDLLGRAG L++AE +IRSMP+K 
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360

Query: 461 DGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRK 520
           D +IWKTLLSAC +HKNAEMA+R+ +EIL++DP D+A YVLL+N+HASA+ W DVSE+RK
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420

Query: 521 AMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGS 580
           +MRD+NVKKE GISW E K  VHQF MGD+S  +  EI SYLKEL  EMKL GY PD  S
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480

Query: 581 VLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRN 640
           VLHDMD EEKE +L  HSEK A+AFALM +PEG PIR++KNLRVC+DCH A K IS I+N
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 540

Query: 641 REIIVRDTSRFHHFKDGECSCGNYW 665
           REI +RD SRFHHF +G+CSCG+YW
Sbjct: 541 REITLRDGSRFHHFINGKCSCGDYW 565

[Close]

BLAST of Carg19249-RA vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 447.6 bits (1150), Expect = 1.4e-125
Identity = 231/612 (37.75%), Postives = 344/612 (56.21%), Query Frame = 0


Query: 58  DPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLV-- 117
           D ++F  +L+SC  +  L  GE VH  ++  G   D +  N L+N+Y+KL  + S +   
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163

Query: 118 -LFSHMPRR--NIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
            +F  MP+R  N                                                
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223

Query: 178 XXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSL 237
                         + PD FTL SVL   +    ++ G+E+H  +++ G + ++ +GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 238 AHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDK 297
             MY KS  + D E++   +  R+ ++WN+L+AG  QNG   E L  +  M  A  +P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 298 ITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVD 357
           + F SVI AC+ LATL  G+Q+H  V++ G GS + + S+L+ MYS+ G ++ + K F  
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 358 REDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKG 417
               D V W+A+I  +  HG G EA+ LF +M+   ++ N+V F+++L ACSH GL ++ 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463

Query: 418 TEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACK 477
             Y + M + Y L   +EHY  V DLLGRAG+LEEA   I  M V+  G +W TLLS+C 
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523

Query: 478 LHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGI 537
           +HKN E+A++++E+I  +D  +  +YVL+ N++AS   W +++++R  MR + ++K+P  
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583

Query: 538 SWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYN 597
           SW+E+KN  H F  GD+SHP   +I+ +LK +M +M+  GYV D   VLHD+D E K   
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643

Query: 598 LAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHH 657
           L  HSE+ A+AF ++N   G  IRV KN+R+C DCH AIK ISKI  REIIVRD SRFHH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703

Query: 658 FKDGECSCGNYW 665
           F  G CSCG+YW
Sbjct: 704 FNRGNCSCGDYW 715

[Close]

BLAST of Carg19249-RA vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-123
Identity = 229/611 (37.48%), Postives = 348/611 (56.96%), Query Frame = 0


Query: 54   EIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSS 113
            EI  +   +  +L++CI+LG L  GEQ+HS +I +    + ++ + L+++Y+KLG L ++
Sbjct: 485  EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544

Query: 114  LVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 173
              +      ++++S                                              
Sbjct: 545  WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR------------------- 604

Query: 174  XXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLA 233
                        GI  DE  L + +  CAGL++L  GQ++HA     GF  +L   ++L 
Sbjct: 605  ------------GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 664

Query: 234  HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKI 293
             +Y + G + +     +     + +AWN L++G  Q+G +EE L  +  M   G   +  
Sbjct: 665  TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 724

Query: 294  TFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDR 353
            TF S + A SE A + QG+Q+HA + K G  S   V ++LISMY++ G + D+ K F++ 
Sbjct: 725  TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 784

Query: 354  EDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGT 413
               + V W+A+I AY  HG G EA++ F QM    +  N VT + +L ACSH GL +KG 
Sbjct: 785  STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 844

Query: 414  EYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKL 473
             Y + M  +Y L P+ EHY CVVD+L RAG L  A+  I+ MP+K D ++W+TLLSAC +
Sbjct: 845  AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 904

Query: 474  HKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGIS 533
            HKN E+ +  +  +L+L+P D+A+YVLLSN++A ++ W      R+ M+++ VKKEPG S
Sbjct: 905  HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 964

Query: 534  WLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNL 593
            W+E+KN +H F +GD++HP   EI  Y ++L       GYV D  S+L+++ +E+K+  +
Sbjct: 965  WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPII 1024

Query: 594  AHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHF 653
              HSEK AI+F L+++P  VPI VMKNLRVCNDCH  IK +SK+ NREIIVRD  RFHHF
Sbjct: 1025 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064

Query: 654  KDGECSCGNYW 665
            + G CSC +YW
Sbjct: 1085 EGGACSCKDYW 1064

[Close]

BLAST of Carg19249-RA vs. TAIR10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-120
Identity = 228/604 (37.75%), Postives = 345/604 (57.12%), Query Frame = 0


Query: 62  FSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMP 121
           FS +L++ + L     G+Q+H+L +T+G + D  + N +L+ YSK   +  + +LF  MP
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312

Query: 122 RRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
             + +S                                                      
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQC---------------------------- 372

Query: 182 XXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGS 241
              +G     F   ++L   A L SL  G+++H   +    +  L VG+SL  MY K   
Sbjct: 373 ---MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 432

Query: 242 LSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISA 301
             + E + KS+P R  V+W  LI+G  Q G     L  +  M+ +  R D+ TF +V+ A
Sbjct: 433 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 492

Query: 302 CSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLW 361
            +  A+L  G+Q+HA +I++G    V   S L+ MY++ G ++D+V+ F +  D + V W
Sbjct: 493 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 552

Query: 362 SAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVE 421
           +A+I+A+  +G GE AI  F +M E  ++ + V+ L +L ACSHCG  E+GTEY   M  
Sbjct: 553 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 612

Query: 422 QYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAK 481
            Y + P+ +HY C++DLLGR GR  EAE ++  MP + D I+W ++L+AC++HKN  +A+
Sbjct: 613 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 672

Query: 482 RISEEILKLDPL-DAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 541
           R +E++  ++ L DAA+YV +SNI+A+A  W  V +++KAMR+R +KK P  SW+E+ + 
Sbjct: 673 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 732

Query: 542 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 601
           +H FS  D++HP   EI   + EL +E++  GY PD  SV+ D+D + K  +L +HSE+ 
Sbjct: 733 IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERL 792

Query: 602 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 661
           A+AFAL++ PEG PI VMKNLR C DCH AIK ISKI  REI VRDTSRFHHF +G CSC
Sbjct: 793 AVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSC 825

Query: 662 GNYW 665
           G+YW
Sbjct: 853 GDYW 825

[Close]

BLAST of Carg19249-RA vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 426.4 bits (1095), Expect = 3.2e-119
Identity = 224/647 (34.62%), Postives = 352/647 (54.40%), Query Frame = 0


Query: 22  SLSTKTSSASLQEFTSLCSGGRITQAYERFKS----EIWSDPSLFSHLLQSCIKLGSLFG 81
           S S+   +  L EFT LC    + +A +   S     +W+D + +S L++ CI   ++  
Sbjct: 20  SYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79

Query: 82  GEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXX 141
           G  +   +  +G     F+ N L+N+Y K   L  +  LF  MP+RN++S          
Sbjct: 80  GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139

Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSV 201
                                                            + P+ +T  SV
Sbjct: 140 CKIHQKALELLVLMLRD-------------------------------NVRPNVYTYSSV 199

Query: 202 LRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNV 261
           LR C G+  +   + +H  ++K G E ++ V S+L  ++ K G   D   +   M   + 
Sbjct: 200 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 259

Query: 262 VAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAE 321
           + WN++I G AQN  S+  L  +  MK AGF  ++ T  SV+ AC+ LA L  G Q H  
Sbjct: 260 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 319

Query: 322 VIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEA 381
           ++K     ++   ++L+ MY + G LED+++ F   ++ DV+ WS MI+    +G  +EA
Sbjct: 320 IVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 379

Query: 382 IELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVD 441
           ++LF +M+    + N +T + +L+ACSH GL E G  Y   M + Y + P  EHY C++D
Sbjct: 380 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 439

Query: 442 LLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAAS 501
           LLG+AG+L++A  ++  M  + D + W+TLL AC++ +N  +A+  +++++ LDP DA +
Sbjct: 440 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 499

Query: 502 YVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEI 561
           Y LLSNI+A+++ W  V EIR  MRDR +KKEPG SW+E+   +H F +GD SHPQ +E+
Sbjct: 500 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 559

Query: 562 DSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRV 621
              L +L+  +   GYVP+   VL D++ E+ E +L HHSEK A+AF LM +P    IR+
Sbjct: 560 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 619

Query: 622 MKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
            KNLR+C DCH   K  SK+  R I++RD  R+HHF+DG+CSCG+YW
Sbjct: 620 RKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]

BLAST of Carg19249-RA vs. Swiss-Prot
Match: sp|Q8S9M4|PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H29 PE=2 SV=2)

HSP 1 Score: 681.0 bits (1756), Expect = 1.3e-194
Identity = 386/646 (59.75%), Postives = 477/646 (73.84%), Query Frame = 0


Query: 20  VRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCIKLGSLFGGE 79
           VR LS   ++A      +LCS G + +A++RF+  I+++ SLF+  +QSC    SL  G+
Sbjct: 9   VRPLSVDPATA----IATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGK 68

Query: 80  QVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXXXX 139
           Q+H L++ SG ++DKFI NHL+++YSKLG+  S++ ++  M ++N MS   XXXXXXXXX
Sbjct: 69  QLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNIXXXXXXXXX 128

Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSVLR 199
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX                GLG  PDE+TLGSV  
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 188

Query: 200 GCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVA 259
           G AGLRS+  GQ++H   +K G EL+LVV SSLAHMYM++G L DGE +I+SMP+RN+VA
Sbjct: 189 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 248

Query: 260 WNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVI 319
           WNTLI G AQNGC E VL  Y MMK++G RP+KITFV+V+S+CS+LA  GQGQQIHAE I
Sbjct: 249 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 308

Query: 320 KAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIE 379
           K GA SVVAVVSSLISMYS+ GCL D+ K F +RED D V+WS+MI+AYGFHG+G+EAIE
Sbjct: 309 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 368

Query: 380 LFHQM-EELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDL 439
           LF+ M E+  ME N                              Y  KP ++HYTCVVDL
Sbjct: 369 LFNTMAEQTNMEINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGFKPGLKHYTCVVDL 428

Query: 440 LGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASY 499
           LGRAG L++AE +IRSMP+K D +IWKTLLSAC +HKNAEMA+R+ +EIL++DP D+A Y
Sbjct: 429 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 488

Query: 500 VLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEID 559
           VLL+N+HASA+ W DVSE+RK+MRD+NVKKE GISW E K  VHQF MGD+S  +  EI 
Sbjct: 489 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 548

Query: 560 SYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVM 619
           SYLKEL  EMKL GY PD  SVLHDMD EEKE +L  HSEK A+AFALM +PEG PIR++
Sbjct: 549 SYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRII 608

Query: 620 KNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
           KNLRVC+DCH A K IS I+NREI +RD SRFHHF +G+CSCG+YW
Sbjct: 609 KNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650

[Close]

BLAST of Carg19249-RA vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.4e-124
Identity = 231/612 (37.75%), Postives = 344/612 (56.21%), Query Frame = 0


Query: 58  DPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLV-- 117
           D ++F  +L+SC  +  L  GE VH  ++  G   D +  N L+N+Y+KL  + S +   
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163

Query: 118 -LFSHMPRR--NIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
            +F  MP+R  N                                                
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223

Query: 178 XXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSL 237
                         + PD FTL SVL   +    ++ G+E+H  +++ G + ++ +GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 238 AHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDK 297
             MY KS  + D E++   +  R+ ++WN+L+AG  QNG   E L  +  M  A  +P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 298 ITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVD 357
           + F SVI AC+ LATL  G+Q+H  V++ G GS + + S+L+ MYS+ G ++ + K F  
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 358 REDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKG 417
               D V W+A+I  +  HG G EA+ LF +M+   ++ N+V F+++L ACSH GL ++ 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463

Query: 418 TEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACK 477
             Y + M + Y L   +EHY  V DLLGRAG+LEEA   I  M V+  G +W TLLS+C 
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523

Query: 478 LHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGI 537
           +HKN E+A++++E+I  +D  +  +YVL+ N++AS   W +++++R  MR + ++K+P  
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583

Query: 538 SWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYN 597
           SW+E+KN  H F  GD+SHP   +I+ +LK +M +M+  GYV D   VLHD+D E K   
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643

Query: 598 LAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHH 657
           L  HSE+ A+AF ++N   G  IRV KN+R+C DCH AIK ISKI  REIIVRD SRFHH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703

Query: 658 FKDGECSCGNYW 665
           F  G CSCG+YW
Sbjct: 704 FNRGNCSCGDYW 715

[Close]

BLAST of Carg19249-RA vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 2.3e-122
Identity = 229/611 (37.48%), Postives = 348/611 (56.96%), Query Frame = 0


Query: 54   EIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSS 113
            EI  +   +  +L++CI+LG L  GEQ+HS +I +    + ++ + L+++Y+KLG L ++
Sbjct: 485  EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544

Query: 114  LVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 173
              +      ++++S                                              
Sbjct: 545  WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR------------------- 604

Query: 174  XXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLA 233
                        GI  DE  L + +  CAGL++L  GQ++HA     GF  +L   ++L 
Sbjct: 605  ------------GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 664

Query: 234  HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKI 293
             +Y + G + +     +     + +AWN L++G  Q+G +EE L  +  M   G   +  
Sbjct: 665  TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 724

Query: 294  TFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDR 353
            TF S + A SE A + QG+Q+HA + K G  S   V ++LISMY++ G + D+ K F++ 
Sbjct: 725  TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 784

Query: 354  EDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGT 413
               + V W+A+I AY  HG G EA++ F QM    +  N VT + +L ACSH GL +KG 
Sbjct: 785  STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 844

Query: 414  EYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKL 473
             Y + M  +Y L P+ EHY CVVD+L RAG L  A+  I+ MP+K D ++W+TLLSAC +
Sbjct: 845  AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 904

Query: 474  HKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGIS 533
            HKN E+ +  +  +L+L+P D+A+YVLLSN++A ++ W      R+ M+++ VKKEPG S
Sbjct: 905  HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 964

Query: 534  WLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNL 593
            W+E+KN +H F +GD++HP   EI  Y ++L       GYV D  S+L+++ +E+K+  +
Sbjct: 965  WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPII 1024

Query: 594  AHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHF 653
              HSEK AI+F L+++P  VPI VMKNLRVCNDCH  IK +SK+ NREIIVRD  RFHHF
Sbjct: 1025 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064

Query: 654  KDGECSCGNYW 665
            + G CSC +YW
Sbjct: 1085 EGGACSCKDYW 1064

[Close]

BLAST of Carg19249-RA vs. Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.1e-119
Identity = 228/604 (37.75%), Postives = 345/604 (57.12%), Query Frame = 0


Query: 62  FSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMP 121
           FS +L++ + L     G+Q+H+L +T+G + D  + N +L+ YSK   +  + +LF  MP
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312

Query: 122 RRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
             + +S                                                      
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQC---------------------------- 372

Query: 182 XXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGS 241
              +G     F   ++L   A L SL  G+++H   +    +  L VG+SL  MY K   
Sbjct: 373 ---MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 432

Query: 242 LSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISA 301
             + E + KS+P R  V+W  LI+G  Q G     L  +  M+ +  R D+ TF +V+ A
Sbjct: 433 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 492

Query: 302 CSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLW 361
            +  A+L  G+Q+HA +I++G    V   S L+ MY++ G ++D+V+ F +  D + V W
Sbjct: 493 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 552

Query: 362 SAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVE 421
           +A+I+A+  +G GE AI  F +M E  ++ + V+ L +L ACSHCG  E+GTEY   M  
Sbjct: 553 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 612

Query: 422 QYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAK 481
            Y + P+ +HY C++DLLGR GR  EAE ++  MP + D I+W ++L+AC++HKN  +A+
Sbjct: 613 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 672

Query: 482 RISEEILKLDPL-DAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 541
           R +E++  ++ L DAA+YV +SNI+A+A  W  V +++KAMR+R +KK P  SW+E+ + 
Sbjct: 673 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 732

Query: 542 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 601
           +H FS  D++HP   EI   + EL +E++  GY PD  SV+ D+D + K  +L +HSE+ 
Sbjct: 733 IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERL 792

Query: 602 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 661
           A+AFAL++ PEG PI VMKNLR C DCH AIK ISKI  REI VRDTSRFHHF +G CSC
Sbjct: 793 AVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSC 825

Query: 662 GNYW 665
           G+YW
Sbjct: 853 GDYW 825

[Close]

BLAST of Carg19249-RA vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 5.8e-118
Identity = 224/647 (34.62%), Postives = 352/647 (54.40%), Query Frame = 0


Query: 22  SLSTKTSSASLQEFTSLCSGGRITQAYERFKS----EIWSDPSLFSHLLQSCIKLGSLFG 81
           S S+   +  L EFT LC    + +A +   S     +W+D + +S L++ CI   ++  
Sbjct: 20  SYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79

Query: 82  GEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXX 141
           G  +   +  +G     F+ N L+N+Y K   L  +  LF  MP+RN++S          
Sbjct: 80  GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139

Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSV 201
                                                            + P+ +T  SV
Sbjct: 140 CKIHQKALELLVLMLRD-------------------------------NVRPNVYTYSSV 199

Query: 202 LRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNV 261
           LR C G+  +   + +H  ++K G E ++ V S+L  ++ K G   D   +   M   + 
Sbjct: 200 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 259

Query: 262 VAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAE 321
           + WN++I G AQN  S+  L  +  MK AGF  ++ T  SV+ AC+ LA L  G Q H  
Sbjct: 260 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 319

Query: 322 VIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEA 381
           ++K     ++   ++L+ MY + G LED+++ F   ++ DV+ WS MI+    +G  +EA
Sbjct: 320 IVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 379

Query: 382 IELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVD 441
           ++LF +M+    + N +T + +L+ACSH GL E G  Y   M + Y + P  EHY C++D
Sbjct: 380 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 439

Query: 442 LLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAAS 501
           LLG+AG+L++A  ++  M  + D + W+TLL AC++ +N  +A+  +++++ LDP DA +
Sbjct: 440 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 499

Query: 502 YVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEI 561
           Y LLSNI+A+++ W  V EIR  MRDR +KKEPG SW+E+   +H F +GD SHPQ +E+
Sbjct: 500 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 559

Query: 562 DSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRV 621
              L +L+  +   GYVP+   VL D++ E+ E +L HHSEK A+AF LM +P    IR+
Sbjct: 560 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 619

Query: 622 MKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
            KNLR+C DCH   K  SK+  R I++RD  R+HHF+DG+CSCG+YW
Sbjct: 620 RKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]

BLAST of Carg19249-RA vs. TrEMBL
Match: tr|A0A1S3C1T8|A0A1S3C1T8_CUCME (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=4 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 599/665 (90.08%), Postives = 629/665 (94.59%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTK-TSSASLQEFTSLCSGGRITQAYERFKSEIWSDP 60
           MGKPS SF+AF +P ++  VRSLS K +SSASLQEFTSLC+ GRI QAY+ FK EIWSDP
Sbjct: 1   MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60

Query: 61  SLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSH 120
           SLFSHLLQSCIKLGSLFGG+QVHSL+ITSG + DKFISNHLLNLYSKLG  KSSLVLFS+
Sbjct: 61  SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNLYSKLGQFKSSLVLFSN 120

Query: 121 MPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           MPRRN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 MPRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
           XXXXGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 XXXXGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240

Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVI 300
           GSLSDGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300

Query: 301 SACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVV 360
           SACSELATLGQGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+K FVDRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360

Query: 361 LWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
           LWS+MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420

Query: 421 VEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
           V++YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480

Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 540
           AKRISEEI+KLDPLDAASYVLLSNIHASARNWP+VSEIRKAMRDRNV+KEPGISWLELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540

Query: 541 LVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEK 600
           LVHQFSMGDKSHPQY EID YLKELMSE+K HGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600

Query: 601 FAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECS 660
           FAIAFALMN  E VPIRVMKNLRVCNDCH AIKCIS+IRNREIIVRD SRFHHFKDGECS
Sbjct: 601 FAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECS 660

Query: 661 CGNYW 665
           CGNYW
Sbjct: 661 CGNYW 665

[Close]

BLAST of Carg19249-RA vs. TrEMBL
Match: tr|A0A1S4E0C2|A0A1S4E0C2_CUCME (pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=4 SV=1)

HSP 1 Score: 1004.6 bits (2596), Expect = 1.0e-289
Identity = 515/665 (77.44%), Postives = 547/665 (82.26%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTK-TSSASLQEFTSLCSGGRITQAYERFKSEIWSDP 60
           MGKPS SF+AF +P ++  VRSLS K +SSASLQEFTSLC+ GRI QAY+ FK EIWSDP
Sbjct: 1   MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60

Query: 61  SLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSH 120
           SLFSHLLQSCIKLGSLFGG+Q                          LG+L+++  LF  
Sbjct: 61  SLFSHLLQSCIKLGSLFGGKQ--------------------------LGDLENAQKLFDE 120

Query: 121 MPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           M  RNI +                                                    
Sbjct: 121 MSERNIAT-------------------------------WNAMIAGLTQFEFNKQALSLF 180

Query: 181 XXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
               GLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 KEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240

Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVI 300
           GSLSDGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300

Query: 301 SACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVV 360
           SACSELATLGQGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+K FVDRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360

Query: 361 LWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
           LWS+MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420

Query: 421 VEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
           V++YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480

Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 540
           AKRISEEI+KLDPLDAASYVLLSNIHASARNWP+VSEIRKAMRDRNV+KEPGISWLELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540

Query: 541 LVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEK 600
           LVHQFSMGDKSHPQY EID YLKELMSE+K HGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600

Query: 601 FAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECS 660
           FAIAFALMN  E VPIRVMKNLRVCNDCH AIKCIS+IRNREIIVRD SRFHHFKDGECS
Sbjct: 601 FAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECS 608

Query: 661 CGNYW 665
           CGNYW
Sbjct: 661 CGNYW 608

[Close]

BLAST of Carg19249-RA vs. TrEMBL
Match: tr|A0A2P6RV04|A0A2P6RV04_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0131051 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 3.9e-260
Identity = 491/638 (76.96%), Postives = 557/638 (87.30%), Query Frame = 0


Query: 27  TSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVI 86
           +S+  +++ T+LCS G I +A+ RFKS++WSDPSLFSHLLQ+CI   SL  G+Q+HSL+I
Sbjct: 6   SSTTCIEQLTTLCSKGLIKEAFGRFKSDLWSDPSLFSHLLQACIPRKSLSLGKQLHSLII 65

Query: 87  TSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXX 146
           TSGC++DKF+ NHLLNLYSK+G+LKS+  LF H+PRRNIM XXXXXXXXXXXXXXXXXXX
Sbjct: 66  TSGCSSDKFVCNHLLNLYSKIGDLKSASTLFGHLPRRNIMXXXXXXXXXXXXXXXXXXXX 125

Query: 147 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRS 206
           XXXXXXXXXXXXXXXXXXXXXXX               LG  PDEFTLGSVLRGCAGLR 
Sbjct: 126 XXXXXXXXXXXXXXXXXXXXXXXEYNEEGLGLFSEMHELGFSPDEFTLGSVLRGCAGLRG 185

Query: 207 LLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAG 266
           L AG EVHA ++KCGFE NLVVGSSLAHMYMKSGSL DGEK+IKSMPIRNVVAWNTLIAG
Sbjct: 186 LTAGCEVHAYVVKCGFEFNLVVGSSLAHMYMKSGSLVDGEKVIKSMPIRNVVAWNTLIAG 245

Query: 267 KAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVIKAGAGSV 326
           KAQNG SE VL+QYNMMK+AGFRPDK+TFVSV+S+CSELATLGQGQQIHAE IKAGA SV
Sbjct: 246 KAQNGQSEGVLDQYNMMKIAGFRPDKVTFVSVLSSCSELATLGQGQQIHAEAIKAGASSV 305

Query: 327 VAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIELFHQMEE 386
           VAV+S+LISMYSR GCLEDS+K F + E ADVVLWS++I+AYGFHGRGEEAI+LF QME+
Sbjct: 306 VAVISTLISMYSRCGCLEDSLKAFRECEGADVVLWSSVISAYGFHGRGEEAIKLFEQMEQ 365

Query: 387 LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLE 446
             +EAN+VTFLSLLYACSHCG+KEKG +  DLMV++Y LKP++EHYTCVVDLLGR+G LE
Sbjct: 366 EGLEANDVTFLSLLYACSHCGMKEKGIKLFDLMVQKYGLKPKLEHYTCVVDLLGRSGFLE 425

Query: 447 EAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHA 506
           EAE MIRSMPVKAD IIWKTLLSACK+HKNA+MA+RI +++L+ DP D+ASYVLLSNIHA
Sbjct: 426 EAEAMIRSMPVKADAIIWKTLLSACKIHKNADMARRIGQDVLRQDPEDSASYVLLSNIHA 485

Query: 507 SARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMS 566
           SAR W DVSE+R AMRDR VKKEPGISWLE+KN V+QF MGD  HPQY+ ID YLKEL S
Sbjct: 486 SARRWQDVSEVRTAMRDRKVKKEPGISWLEIKNKVYQFRMGDNCHPQYMAIDLYLKELRS 545

Query: 567 EMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCND 626
           EMKLHGYVPD GSVLHDMDNEEKEY+LAHHSEK AIAFAL+N PEGVP+RVMKNLRVC D
Sbjct: 546 EMKLHGYVPDTGSVLHDMDNEEKEYDLAHHSEKLAIAFALINTPEGVPVRVMKNLRVCID 605

Query: 627 CHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
           CH AIK IS+I+NREIIVRD SRFHHFK G+CSCG+YW
Sbjct: 606 CHVAIKYISQIKNREIIVRDASRFHHFKHGKCSCGDYW 643

[Close]

BLAST of Carg19249-RA vs. TrEMBL
Match: tr|A0A0A0K2D8|A0A0A0K2D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049200 PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 2.6e-256
Identity = 436/481 (90.64%), Postives = 461/481 (95.84%), Query Frame = 0


Query: 184 GLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLS 243
           GLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KSGSLS
Sbjct: 70  GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 129

Query: 244 DGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACS 303
           DGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+SACS
Sbjct: 130 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 189

Query: 304 ELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSA 363
           ELATLGQGQQIHAEVIKAGA SV+AVVSSLISMYSRSGCLEDS+K FVDRE+ DVVLWS+
Sbjct: 190 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 249

Query: 364 MIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQY 423
           MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEY DLMV++Y
Sbjct: 250 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 309

Query: 424 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRI 483
           KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV+ DGIIWKTLL+ACKLHK AEMA+RI
Sbjct: 310 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 369

Query: 484 SEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQ 543
           SEEI+KLDPLDAASYVLLSNIHASARNW +VS+IRKAMRDR+V+KEPGISWLELKNLVHQ
Sbjct: 370 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 429

Query: 544 FSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIA 603
           FSMGDKSHPQY EID YLKELMSE+K HGYVP++GSVLHDMDNEEKEYNLAHHSEKFAIA
Sbjct: 430 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 489

Query: 604 FALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNY 663
           FALMN  E VPIRVMKNLRVC+DCH AIKCIS+IRNREIIVRD SRFHHFKDGECSCGNY
Sbjct: 490 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 549

Query: 664 W 665
           W
Sbjct: 550 W 550

[Close]

BLAST of Carg19249-RA vs. TrEMBL
Match: tr|A0A2I4EZF1|A0A2I4EZF1_9ROSI (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994137 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 3.5e-253
Identity = 501/654 (76.61%), Postives = 571/654 (87.31%), Query Frame = 0


Query: 11  FFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCI 70
           FFS   A     LS   S    Q++ +LC  G I +AYER+KSEI+S+PSL S+L+Q+CI
Sbjct: 49  FFSTNAAKTAYKLSDSVSEFK-QDYANLCFKGHIKEAYERYKSEIFSEPSLLSNLIQACI 108

Query: 71  KLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXX 130
              SL  G+Q+HS++ITSGC  DKF+SNHLLN+YSK+G+L++++ LF HM +RNIMSXXX
Sbjct: 109 PQKSLSLGKQLHSMIITSGCYLDKFVSNHLLNMYSKIGDLRTAVTLFEHMYKRNIMSXXX 168

Query: 131 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPD 190
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LG LPD
Sbjct: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLGFLPD 228

Query: 191 EFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIK 250
           EFTLGSVLR CAGLR L AG ++HA ++KCGFE NLVVGSSLAHMYMKSGSL  GEK+IK
Sbjct: 229 EFTLGSVLRSCAGLRCLHAGWQIHAYVVKCGFEFNLVVGSSLAHMYMKSGSLEGGEKVIK 288

Query: 251 SMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQ 310
            MPIRNV+AWNTLIAGKAQNG  EEVL+QYNMMK+AGFRPDKITFVSV+S+CSELATLGQ
Sbjct: 289 LMPIRNVIAWNTLIAGKAQNGYPEEVLDQYNMMKIAGFRPDKITFVSVLSSCSELATLGQ 348

Query: 311 GQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGF 370
           GQQIHAE IKAGA SVV+VVSSLISMYSR GCLEDS+K F++ E  DVVLWS+MIAAYGF
Sbjct: 349 GQQIHAEAIKAGACSVVSVVSSLISMYSRCGCLEDSLKAFLECEHTDVVLWSSMIAAYGF 408

Query: 371 HGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIE 430
           HGRG+EAIELF  ME+ ++EANEVTFLSLLYACSHCGLKEKG E+ D MV++Y ++PR+E
Sbjct: 409 HGRGDEAIELFEYMEQEEIEANEVTFLSLLYACSHCGLKEKGIEFFDKMVKKYAVEPRLE 468

Query: 431 HYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKL 490
           HYTC+VDLLGR+G LEEAE MIRSMPVKAD IIWKTLLSACK+HK A+MAKRI+EE+++L
Sbjct: 469 HYTCMVDLLGRSGCLEEAEAMIRSMPVKADVIIWKTLLSACKIHKKADMAKRIAEEVIRL 528

Query: 491 DPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKS 550
            P D+A YVLLSNIHASA+ W DVSE+RKAMRDR VKKEPGISWLE+KN VHQF +GDK+
Sbjct: 529 YPQDSAPYVLLSNIHASAKRWQDVSEVRKAMRDRMVKKEPGISWLEVKNAVHQFCIGDKT 588

Query: 551 HPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIP 610
           HP+  EID YLKEL SEMKL GYVPD  +VLHDMDNEEKEYNLAHHSEK A+AFALMN P
Sbjct: 589 HPKSAEIDLYLKELTSEMKLRGYVPDTAAVLHDMDNEEKEYNLAHHSEKLAVAFALMNTP 648

Query: 611 EGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
            GVPIRVMKNLRVC+DCH AIK IS+IRNREIIVRD SRFHHFK+G+CSCG+YW
Sbjct: 649 AGVPIRVMKNLRVCSDCHVAIKYISEIRNREIIVRDASRFHHFKNGKCSCGDYW 701

The following BLAST results are available for this feature:

BLAST of Carg19249-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553764.1	0.0e+00	99.70	pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pep...	[more]
XP_022953052.1	0.0e+00	99.55	pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata]	[more]
XP_022969026.1	0.0e+00	98.49	pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima]	[more]
XP_022147886.1	0.0e+00	90.81	pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Momordica char...	[more]
XP_008455289.1	0.0e+00	90.08	PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Cuc...	[more]

BLAST of Carg19249-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41080.1	3.4e-177	55.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G23330.1	1.4e-125	37.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G13650.1	1.3e-123	37.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G02010.1	1.7e-120	37.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03880.1	3.2e-119	34.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg19249-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S9M4\|PP198_ARATH	1.3e-194	59.75	Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LW63\|PP251_ARATH	2.4e-124	37.75	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
sp\|Q9SVP7\|PP307_ARATH	2.3e-122	37.48	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9S7F4\|PP206_ARATH	3.1e-119	37.75	Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th...	[more]
sp\|Q9SI53\|PP147_ARATH	5.8e-118	34.62	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]

BLAST of Carg19249-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1T8\|A0A1S3C1T8_CUCME	0.0e+00	90.08	pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo...	[more]
tr\|A0A1S4E0C2\|A0A1S4E0C2_CUCME	1.0e-289	77.44	pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo...	[more]
tr\|A0A2P6RV04\|A0A2P6RV04_ROSCH	3.9e-260	76.96	Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS...	[more]
tr\|A0A0A0K2D8\|A0A0A0K2D8_CUCSA	2.6e-256	90.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049200 PE=4 SV=1	[more]
tr\|A0A2I4EZF1\|A0A2I4EZF1_9ROSI	3.5e-253	76.61	pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Juglans regi...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR032867	DYW_dom
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19249	Carg19249	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19249-RA.exon.1	Carg19249-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19249-RA.CDS.1	Carg19249-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19249-RA	Carg19249-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 432..455 e-value: 0.0014 score: 16.6 coord: 359..392 e-value: 4.0E-5 score: 21.5 coord: 127..156 e-value: 7.2E-7 score: 27.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 331..350 e-value: 0.63 score: 10.3 coord: 431..456 e-value: 0.0049 score: 16.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 124..152 e-value: 5.8E-7 score: 29.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 255..302 e-value: 6.8E-10 score: 38.9 coord: 357..404 e-value: 2.0E-9 score: 37.3 coord: 155..202 e-value: 2.2E-9 score: 37.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..458 score: 7.421
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 256..290 score: 10.139
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 225..255 score: 6.095
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 291..325 score: 6.566
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 159..189 score: 6.993
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..422 score: 7.169
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 460..490 score: 5.777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 326..356 score: 5.152
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 93..123 score: 7.366
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 494..528 score: 6.862
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 190..224 score: 6.511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 58..92 score: 6.643
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 10.841
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 124..158 score: 12.079
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 330..551 e-value: 6.5E-35 score: 122.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 92..207 e-value: 2.9E-26 score: 93.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 208..321 e-value: 8.2E-19 score: 70.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 372..409 coord: 467..512 coord: 104..148
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 530..654 e-value: 1.8E-41 score: 140.9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 253..581
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 154..258 coord: 18..153
None	No IPR available	PANTHER	PTHR24015:SF806	SUBFAMILY NOT NAMED	coord: 154..258 coord: 253..581 coord: 18..153