Carg19249 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19249
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein
Location	Cucurbita_argyrosperma_scaffold_099 : 487412 .. 489406 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGCCCAGTCGCAGTTTCGACGCCTTCTTCAGCCCCTTACATGCACTTGCTGTGCGATCGCTCTCCACGAAGACTTCTTCTGCTTCTTTACAAGAATTTACCAGCCTCTGCAGTGGCGGACGCATAACACAAGCCTATGAGAGGTTCAAATCCGAGATATGGTCAGACCCATCTCTTTTTTCTCATCTGCTCCAATCGTGCATAAAACTAGGCTCACTTTTTGGAGGAGAACAGGTCCATTCTTTGGTCATTACATCTGGGTGTGCCAATGACAAGTTCATTTCCAATCACCTTCTGAACTTGTACTCCAAATTAGGAAATTTGAAGTCTTCTTTGGTGCTGTTTAGTCATATGCCACGAAGAAATATAATGTCATATAACATTTTGATTAATGGGTACTTGCAGCTTGGGGATTTGGAAAGTGCCCAGAAGCTGTTTGATGAAATGTCTGAAAGAAACATTGCCACATGGAATGCGATGATCACAGGTCTAACTCAGTTTGAATATAACGAGCAGGCTTTAGGTTTGTTTAGAGAAATGTATGGATTGGGTATTTTGCCTGATGAGTTCACACTAGGCAGTGTACTTAGAGGGTGCGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTGATGAAATGTGGATTTGAACTGAATTTGGTCGTGGGCAGCTCTCTAGCTCATATGTATATGAAGTCTGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGCAATGTAGTTGCTTGGAATACTCTTATAGCTGGAAAAGCTCAAAACGGGTGTTCAGAAGAAGTCTTGAACCAGTACAATATGATGAAAATGGCAGGCTTTCGACCCGATAAAATTACATTTGTGAGTGTAATAAGCGCGTGTTCGGAGCTTGCGACGTTAGGACAAGGCCAGCAGATCCATGCTGAAGTGATCAAAGCCGGAGCTGGTTCAGTTGTAGCAGTTGTCAGCTCCTTGATTAGCATGTATTCACGGTCTGGATGTCTAGAGGACTCTGTGAAAACCTTTGTGGATCGTGAAGATGCTGATGTTGTGTTATGGAGTGCTATGATTGCAGCTTATGGATTCCATGGGAGGGGAGAGGAAGCTATTGAGCTTTTTCACCAAATGGAAGAGTTGAAAATGGAGGCTAATGAAGTGACCTTCTTGAGTCTCCTTTATGCTTGTAGTCACTGTGGATTGAAGGAGAAAGGAACTGAGTATTTAGATTTGATGGTGGAGCAGTATAAACTCAAGCCTAGAATCGAACACTACACGTGTGTGGTCGATCTGCTCGGTCGGGCTGGCCGTTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTAAAAGCAGATGGCATCATATGGAAAACTTTATTATCAGCCTGCAAACTCCACAAGAACGCAGAAATGGCAAAACGAATTTCTGAAGAAATTCTGAAGCTTGATCCTCTGGATGCTGCTTCCTACGTGCTGCTTTCGAACATCCATGCCTCTGCTAGAAATTGGCCCGACGTTTCCGAGATTAGGAAAGCCATGAGAGATCGGAACGTCAAGAAGGAGCCCGGCATAAGTTGGCTAGAACTCAAAAACTTGGTTCACCAATTTAGTATGGGTGACAAATCTCATCCACAGTACCTCGAGATCGACTCGTATTTGAAAGAACTAATGTCTGAAATGAAACTACATGGTTACGTGCCAGACATAGGCTCGGTTTTGCACGACATGGACAACGAAGAAAAGGAATACAATTTAGCTCATCACAGTGAGAAGTTTGCCATTGCTTTTGCACTGATGAACATTCCCGAGGGTGTCCCAATAAGAGTGATGAAGAACTTGCGGGTCTGCAATGACTGTCATGAAGCCATTAAGTGCATATCAAAGATCAGAAACAGAGAGATTATTGTAAGAGATACAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

mRNA sequence

ATGGGCAAGCCCAGTCGCAGTTTCGACGCCTTCTTCAGCCCCTTACATGCACTTGCTGTGCGATCGCTCTCCACGAAGACTTCTTCTGCTTCTTTACAAGAATTTACCAGCCTCTGCAGTGGCGGACGCATAACACAAGCCTATGAGAGGTTCAAATCCGAGATATGGTCAGACCCATCTCTTTTTTCTCATCTGCTCCAATCGTGCATAAAACTAGGCTCACTTTTTGGAGGAGAACAGGTCCATTCTTTGGTCATTACATCTGGGTGTGCCAATGACAAGTTCATTTCCAATCACCTTCTGAACTTGTACTCCAAATTAGGAAATTTGAAGTCTTCTTTGGTGCTGTTTAGTCATATGCCACGAAGAAATATAATGTCATATAACATTTTGATTAATGGGTACTTGCAGCTTGGGGATTTGGAAAGTGCCCAGAAGCTGTTTGATGAAATGTCTGAAAGAAACATTGCCACATGGAATGCGATGATCACAGGTCTAACTCAGTTTGAATATAACGAGCAGGCTTTAGGTTTGTTTAGAGAAATGTATGGATTGGGTATTTTGCCTGATGAGTTCACACTAGGCAGTGTACTTAGAGGGTGCGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTGATGAAATGTGGATTTGAACTGAATTTGGTCGTGGGCAGCTCTCTAGCTCATATGTATATGAAGTCTGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGCAATGTAGTTGCTTGGAATACTCTTATAGCTGGAAAAGCTCAAAACGGGTGTTCAGAAGAAGTCTTGAACCAGTACAATATGATGAAAATGGCAGGCTTTCGACCCGATAAAATTACATTTGTGAGTGTAATAAGCGCGTGTTCGGAGCTTGCGACGTTAGGACAAGGCCAGCAGATCCATGCTGAAGTGATCAAAGCCGGAGCTGGTTCAGTTGTAGCAGTTGTCAGCTCCTTGATTAGCATGTATTCACGGTCTGGATGTCTAGAGGACTCTGTGAAAACCTTTGTGGATCGTGAAGATGCTGATGTTGTGTTATGGAGTGCTATGATTGCAGCTTATGGATTCCATGGGAGGGGAGAGGAAGCTATTGAGCTTTTTCACCAAATGGAAGAGTTGAAAATGGAGGCTAATGAAGTGACCTTCTTGAGTCTCCTTTATGCTTGTAGTCACTGTGGATTGAAGGAGAAAGGAACTGAGTATTTAGATTTGATGGTGGAGCAGTATAAACTCAAGCCTAGAATCGAACACTACACGTGTGTGGTCGATCTGCTCGGTCGGGCTGGCCGTTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTAAAAGCAGATGGCATCATATGGAAAACTTTATTATCAGCCTGCAAACTCCACAAGAACGCAGAAATGGCAAAACGAATTTCTGAAGAAATTCTGAAGCTTGATCCTCTGGATGCTGCTTCCTACGTGCTGCTTTCGAACATCCATGCCTCTGCTAGAAATTGGCCCGACGTTTCCGAGATTAGGAAAGCCATGAGAGATCGGAACGTCAAGAAGGAGCCCGGCATAAGTTGGCTAGAACTCAAAAACTTGGTTCACCAATTTAGTATGGGTGACAAATCTCATCCACAGTACCTCGAGATCGACTCGTATTTGAAAGAACTAATGTCTGAAATGAAACTACATGGTTACGTGCCAGACATAGGCTCGGTTTTGCACGACATGGACAACGAAGAAAAGGAATACAATTTAGCTCATCACAGTGAGAAGTTTGCCATTGCTTTTGCACTGATGAACATTCCCGAGGGTGTCCCAATAAGAGTGATGAAGAACTTGCGGGTCTGCAATGACTGTCATGAAGCCATTAAGTGCATATCAAAGATCAGAAACAGAGAGATTATTGTAAGAGATACAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

Coding sequence (CDS)

ATGGGCAAGCCCAGTCGCAGTTTCGACGCCTTCTTCAGCCCCTTACATGCACTTGCTGTGCGATCGCTCTCCACGAAGACTTCTTCTGCTTCTTTACAAGAATTTACCAGCCTCTGCAGTGGCGGACGCATAACACAAGCCTATGAGAGGTTCAAATCCGAGATATGGTCAGACCCATCTCTTTTTTCTCATCTGCTCCAATCGTGCATAAAACTAGGCTCACTTTTTGGAGGAGAACAGGTCCATTCTTTGGTCATTACATCTGGGTGTGCCAATGACAAGTTCATTTCCAATCACCTTCTGAACTTGTACTCCAAATTAGGAAATTTGAAGTCTTCTTTGGTGCTGTTTAGTCATATGCCACGAAGAAATATAATGTCATATAACATTTTGATTAATGGGTACTTGCAGCTTGGGGATTTGGAAAGTGCCCAGAAGCTGTTTGATGAAATGTCTGAAAGAAACATTGCCACATGGAATGCGATGATCACAGGTCTAACTCAGTTTGAATATAACGAGCAGGCTTTAGGTTTGTTTAGAGAAATGTATGGATTGGGTATTTTGCCTGATGAGTTCACACTAGGCAGTGTACTTAGAGGGTGCGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTGATGAAATGTGGATTTGAACTGAATTTGGTCGTGGGCAGCTCTCTAGCTCATATGTATATGAAGTCTGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGCAATGTAGTTGCTTGGAATACTCTTATAGCTGGAAAAGCTCAAAACGGGTGTTCAGAAGAAGTCTTGAACCAGTACAATATGATGAAAATGGCAGGCTTTCGACCCGATAAAATTACATTTGTGAGTGTAATAAGCGCGTGTTCGGAGCTTGCGACGTTAGGACAAGGCCAGCAGATCCATGCTGAAGTGATCAAAGCCGGAGCTGGTTCAGTTGTAGCAGTTGTCAGCTCCTTGATTAGCATGTATTCACGGTCTGGATGTCTAGAGGACTCTGTGAAAACCTTTGTGGATCGTGAAGATGCTGATGTTGTGTTATGGAGTGCTATGATTGCAGCTTATGGATTCCATGGGAGGGGAGAGGAAGCTATTGAGCTTTTTCACCAAATGGAAGAGTTGAAAATGGAGGCTAATGAAGTGACCTTCTTGAGTCTCCTTTATGCTTGTAGTCACTGTGGATTGAAGGAGAAAGGAACTGAGTATTTAGATTTGATGGTGGAGCAGTATAAACTCAAGCCTAGAATCGAACACTACACGTGTGTGGTCGATCTGCTCGGTCGGGCTGGCCGTTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTAAAAGCAGATGGCATCATATGGAAAACTTTATTATCAGCCTGCAAACTCCACAAGAACGCAGAAATGGCAAAACGAATTTCTGAAGAAATTCTGAAGCTTGATCCTCTGGATGCTGCTTCCTACGTGCTGCTTTCGAACATCCATGCCTCTGCTAGAAATTGGCCCGACGTTTCCGAGATTAGGAAAGCCATGAGAGATCGGAACGTCAAGAAGGAGCCCGGCATAAGTTGGCTAGAACTCAAAAACTTGGTTCACCAATTTAGTATGGGTGACAAATCTCATCCACAGTACCTCGAGATCGACTCGTATTTGAAAGAACTAATGTCTGAAATGAAACTACATGGTTACGTGCCAGACATAGGCTCGGTTTTGCACGACATGGACAACGAAGAAAAGGAATACAATTTAGCTCATCACAGTGAGAAGTTTGCCATTGCTTTTGCACTGATGAACATTCCCGAGGGTGTCCCAATAAGAGTGATGAAGAACTTGCGGGTCTGCAATGACTGTCATGAAGCCATTAAGTGCATATCAAAGATCAGAAACAGAGAGATTATTGTAAGAGATACAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

Protein sequence

MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFREMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW

Homology

[Close]

BLAST of Carg19249 vs. NCBI nr
Match: XP_023553764.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 662/664 (99.70%), Postives = 663/664 (99.85%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS
Sbjct: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM
Sbjct: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNS 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGY+PDIGSVLHDMDNEEKEYNLAHHSEKF
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYMPDIGSVLHDMDNEEKEYNLAHHSEKF 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC
Sbjct: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249 vs. NCBI nr
Match: XP_022953052.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 661/664 (99.55%), Postives = 663/664 (99.85%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MG+PSRSFDA F+PLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS
Sbjct: 1   MGQPSRSFDALFNPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM
Sbjct: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC
Sbjct: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249 vs. NCBI nr
Match: XP_022969026.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima])

HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 654/664 (98.49%), Postives = 656/664 (98.80%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MGKPSRSFDA F+PLHAL VR LSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS
Sbjct: 1   MGKPSRSFDALFNPLHALTVRLLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCIKLGSLFGGEQVHSLVITSGCA DKFISNHLLNLYSKLGNLKSSLVLFS M
Sbjct: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCAYDKFISNHLLNLYSKLGNLKSSLVLFSQM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG
Sbjct: 181 XXXGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTF+DREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFLDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHK AEMA
Sbjct: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKKAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL
Sbjct: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF
Sbjct: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC
Sbjct: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249 vs. NCBI nr
Match: XP_022147886.1 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Momordica charantia])

HSP 1 Score: 1092.8 bits (2825), Expect = 0.0e+00
Identity = 603/664 (90.81%), Postives = 632/664 (95.18%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
           MGKP  SF A F+PLHA AVR LSTKTSS  LQEFT+LC+GGRI QAYE FKSEIWSDPS
Sbjct: 1   MGKPILSFHALFNPLHAPAVRFLSTKTSSVYLQEFTNLCNGGRIRQAYESFKSEIWSDPS 60

Query: 61  LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
           LFSHLLQSCI++GS+FGG+Q+HSLVITSGC+ DKFISNHLLNLYSKLG  K+SLVLFSHM
Sbjct: 61  LFSHLLQSCIEIGSIFGGKQLHSLVITSGCSQDKFISNHLLNLYSKLGQFKTSLVLFSHM 120

Query: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
           XXXGLG LPDEFTLGSVLRGCAGLRS+ AGQEVHACLMKCGFELNLVVGSS+AHMYMKSG
Sbjct: 181 XXXGLGFLPDEFTLGSVLRGCAGLRSIRAGQEVHACLMKCGFELNLVVGSSVAHMYMKSG 240

Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300
           SLSDGEK+IKSMP RNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS
Sbjct: 241 SLSDGEKVIKSMPTRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVIS 300

Query: 301 ACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVL 360
           ACSELATLGQGQQIHAE IKAGAGSVVAV+SSLISMYSRSGCL+DSVK F+DREDADVVL
Sbjct: 301 ACSELATLGQGQQIHAEAIKAGAGSVVAVISSLISMYSRSGCLDDSVKAFLDREDADVVL 360

Query: 361 WSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420
           WSAMIAAYGFHGRGEE IELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV
Sbjct: 361 WSAMIAAYGFHGRGEEVIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMV 420

Query: 421 EQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMA 480
           ++YKLKPRIEHYTCVVDLLGRAGRLEEAE  IRSMPVKADGIIWKTLLSACK+HK AEMA
Sbjct: 421 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEATIRSMPVKADGIIWKTLLSACKIHKKAEMA 480

Query: 481 KRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 540
           KRISE+ILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDR V+KEPGISWLELK+ 
Sbjct: 481 KRISEDILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRQVRKEPGISWLELKST 540

Query: 541 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 600
           VHQF+M DKSHP+YLEI+ YLKELM+EMKL GYVPDIGSVLHDMDNEEKEYNLAHHSEK 
Sbjct: 541 VHQFNMSDKSHPKYLEIELYLKELMAEMKLQGYVPDIGSVLHDMDNEEKEYNLAHHSEKL 600

Query: 601 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 660
           AIAFALMN PE  PIRVMKNLRVC+DCH+AIKCISKIRNREIIVRD SRFHHF+DGECSC
Sbjct: 601 AIAFALMNTPESAPIRVMKNLRVCSDCHDAIKCISKIRNREIIVRDASRFHHFRDGECSC 660

Query: 661 GNYW 665
           GNYW
Sbjct: 661 GNYW 664

[Close]

BLAST of Carg19249 vs. NCBI nr
Match: XP_008455289.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Cucumis melo])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 599/665 (90.08%), Postives = 629/665 (94.59%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTK-TSSASLQEFTSLCSGGRITQAYERFKSEIWSDP 60
           MGKPS SF+AF +P ++  VRSLS K +SSASLQEFTSLC+ GRI QAY+ FK EIWSDP
Sbjct: 1   MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60

Query: 61  SLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSH 120
           SLFSHLLQSCIKLGSLFGG+QVHSL+ITSG + DKFISNHLLNLYSKLG  KSSLVLFS+
Sbjct: 61  SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNLYSKLGQFKSSLVLFSN 120

Query: 121 MPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           MPRRN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 MPRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
           XXXXGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 XXXXGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240

Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVI 300
           GSLSDGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300

Query: 301 SACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVV 360
           SACSELATLGQGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+K FVDRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360

Query: 361 LWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
           LWS+MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420

Query: 421 VEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
           V++YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480

Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 540
           AKRISEEI+KLDPLDAASYVLLSNIHASARNWP+VSEIRKAMRDRNV+KEPGISWLELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540

Query: 541 LVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEK 600
           LVHQFSMGDKSHPQY EID YLKELMSE+K HGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600

Query: 601 FAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECS 660
           FAIAFALMN  E VPIRVMKNLRVCNDCH AIKCIS+IRNREIIVRD SRFHHFKDGECS
Sbjct: 601 FAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECS 660

Query: 661 CGNYW 665
           CGNYW
Sbjct: 661 CGNYW 665

[Close]

BLAST of Carg19249 vs. TAIR10
Match: AT2G41080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 619.0 bits (1595), Expect = 3.4e-177
Identity = 315/565 (55.75%), Postives = 387/565 (68.50%), Query Frame = 0


Query: 101 LNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 160
           +++YSKLG+  S++ ++  M ++N MS                                 
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60

Query: 161 XXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKC 220
                                  GLG  PDE+TLGSV  G AGLRS+  GQ++H   +K 
Sbjct: 61  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120

Query: 221 GFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQY 280
           G EL+LVV SSLAHMYM++G L DGE +I+SMP+RN+VAWNTLI G AQNGC E VL  Y
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180

Query: 281 NMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRS 340
            MMK++G RP+KITFV+V+S+CS+LA  GQGQQIHAE IK GA SVVAVVSSLISMYS+ 
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240

Query: 341 GCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIELFHQM-EELKMEANEVTFLSL 400
           GCL D+ K F +RED D V+WS+MI+AYGFHG+G+EAIELF+ M E+  ME N       
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINXXXXXXX 300

Query: 401 LYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKA 460
                                  Y  KP ++HYTCVVDLLGRAG L++AE +IRSMP+K 
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360

Query: 461 DGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRK 520
           D +IWKTLLSAC +HKNAEMA+R+ +EIL++DP D+A YVLL+N+HASA+ W DVSE+RK
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420

Query: 521 AMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGS 580
           +MRD+NVKKE GISW E K  VHQF MGD+S  +  EI SYLKEL  EMKL GY PD  S
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480

Query: 581 VLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRN 640
           VLHDMD EEKE +L  HSEK A+AFALM +PEG PIR++KNLRVC+DCH A K IS I+N
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 540

Query: 641 REIIVRDTSRFHHFKDGECSCGNYW 665
           REI +RD SRFHHF +G+CSCG+YW
Sbjct: 541 REITLRDGSRFHHFINGKCSCGDYW 565

[Close]

BLAST of Carg19249 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 447.6 bits (1150), Expect = 1.4e-125
Identity = 231/612 (37.75%), Postives = 344/612 (56.21%), Query Frame = 0


Query: 58  DPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLV-- 117
           D ++F  +L+SC  +  L  GE VH  ++  G   D +  N L+N+Y+KL  + S +   
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163

Query: 118 -LFSHMPRR--NIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
            +F  MP+R  N                                                
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223

Query: 178 XXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSL 237
                         + PD FTL SVL   +    ++ G+E+H  +++ G + ++ +GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 238 AHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDK 297
             MY KS  + D E++   +  R+ ++WN+L+AG  QNG   E L  +  M  A  +P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 298 ITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVD 357
           + F SVI AC+ LATL  G+Q+H  V++ G GS + + S+L+ MYS+ G ++ + K F  
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 358 REDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKG 417
               D V W+A+I  +  HG G EA+ LF +M+   ++ N+V F+++L ACSH GL ++ 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463

Query: 418 TEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACK 477
             Y + M + Y L   +EHY  V DLLGRAG+LEEA   I  M V+  G +W TLLS+C 
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523

Query: 478 LHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGI 537
           +HKN E+A++++E+I  +D  +  +YVL+ N++AS   W +++++R  MR + ++K+P  
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583

Query: 538 SWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYN 597
           SW+E+KN  H F  GD+SHP   +I+ +LK +M +M+  GYV D   VLHD+D E K   
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643

Query: 598 LAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHH 657
           L  HSE+ A+AF ++N   G  IRV KN+R+C DCH AIK ISKI  REIIVRD SRFHH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703

Query: 658 FKDGECSCGNYW 665
           F  G CSCG+YW
Sbjct: 704 FNRGNCSCGDYW 715

[Close]

BLAST of Carg19249 vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-123
Identity = 229/611 (37.48%), Postives = 348/611 (56.96%), Query Frame = 0


Query: 54   EIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSS 113
            EI  +   +  +L++CI+LG L  GEQ+HS +I +    + ++ + L+++Y+KLG L ++
Sbjct: 485  EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544

Query: 114  LVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 173
              +      ++++S                                              
Sbjct: 545  WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR------------------- 604

Query: 174  XXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLA 233
                        GI  DE  L + +  CAGL++L  GQ++HA     GF  +L   ++L 
Sbjct: 605  ------------GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 664

Query: 234  HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKI 293
             +Y + G + +     +     + +AWN L++G  Q+G +EE L  +  M   G   +  
Sbjct: 665  TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 724

Query: 294  TFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDR 353
            TF S + A SE A + QG+Q+HA + K G  S   V ++LISMY++ G + D+ K F++ 
Sbjct: 725  TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 784

Query: 354  EDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGT 413
               + V W+A+I AY  HG G EA++ F QM    +  N VT + +L ACSH GL +KG 
Sbjct: 785  STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 844

Query: 414  EYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKL 473
             Y + M  +Y L P+ EHY CVVD+L RAG L  A+  I+ MP+K D ++W+TLLSAC +
Sbjct: 845  AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 904

Query: 474  HKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGIS 533
            HKN E+ +  +  +L+L+P D+A+YVLLSN++A ++ W      R+ M+++ VKKEPG S
Sbjct: 905  HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 964

Query: 534  WLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNL 593
            W+E+KN +H F +GD++HP   EI  Y ++L       GYV D  S+L+++ +E+K+  +
Sbjct: 965  WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPII 1024

Query: 594  AHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHF 653
              HSEK AI+F L+++P  VPI VMKNLRVCNDCH  IK +SK+ NREIIVRD  RFHHF
Sbjct: 1025 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064

Query: 654  KDGECSCGNYW 665
            + G CSC +YW
Sbjct: 1085 EGGACSCKDYW 1064

[Close]

BLAST of Carg19249 vs. TAIR10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-120
Identity = 228/604 (37.75%), Postives = 345/604 (57.12%), Query Frame = 0


Query: 62  FSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMP 121
           FS +L++ + L     G+Q+H+L +T+G + D  + N +L+ YSK   +  + +LF  MP
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312

Query: 122 RRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
             + +S                                                      
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQC---------------------------- 372

Query: 182 XXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGS 241
              +G     F   ++L   A L SL  G+++H   +    +  L VG+SL  MY K   
Sbjct: 373 ---MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 432

Query: 242 LSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISA 301
             + E + KS+P R  V+W  LI+G  Q G     L  +  M+ +  R D+ TF +V+ A
Sbjct: 433 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 492

Query: 302 CSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLW 361
            +  A+L  G+Q+HA +I++G    V   S L+ MY++ G ++D+V+ F +  D + V W
Sbjct: 493 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 552

Query: 362 SAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVE 421
           +A+I+A+  +G GE AI  F +M E  ++ + V+ L +L ACSHCG  E+GTEY   M  
Sbjct: 553 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 612

Query: 422 QYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAK 481
            Y + P+ +HY C++DLLGR GR  EAE ++  MP + D I+W ++L+AC++HKN  +A+
Sbjct: 613 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 672

Query: 482 RISEEILKLDPL-DAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 541
           R +E++  ++ L DAA+YV +SNI+A+A  W  V +++KAMR+R +KK P  SW+E+ + 
Sbjct: 673 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 732

Query: 542 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 601
           +H FS  D++HP   EI   + EL +E++  GY PD  SV+ D+D + K  +L +HSE+ 
Sbjct: 733 IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERL 792

Query: 602 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 661
           A+AFAL++ PEG PI VMKNLR C DCH AIK ISKI  REI VRDTSRFHHF +G CSC
Sbjct: 793 AVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSC 825

Query: 662 GNYW 665
           G+YW
Sbjct: 853 GDYW 825

[Close]

BLAST of Carg19249 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 426.4 bits (1095), Expect = 3.2e-119
Identity = 224/647 (34.62%), Postives = 352/647 (54.40%), Query Frame = 0


Query: 22  SLSTKTSSASLQEFTSLCSGGRITQAYERFKS----EIWSDPSLFSHLLQSCIKLGSLFG 81
           S S+   +  L EFT LC    + +A +   S     +W+D + +S L++ CI   ++  
Sbjct: 20  SYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79

Query: 82  GEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXX 141
           G  +   +  +G     F+ N L+N+Y K   L  +  LF  MP+RN++S          
Sbjct: 80  GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139

Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSV 201
                                                            + P+ +T  SV
Sbjct: 140 CKIHQKALELLVLMLRD-------------------------------NVRPNVYTYSSV 199

Query: 202 LRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNV 261
           LR C G+  +   + +H  ++K G E ++ V S+L  ++ K G   D   +   M   + 
Sbjct: 200 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 259

Query: 262 VAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAE 321
           + WN++I G AQN  S+  L  +  MK AGF  ++ T  SV+ AC+ LA L  G Q H  
Sbjct: 260 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 319

Query: 322 VIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEA 381
           ++K     ++   ++L+ MY + G LED+++ F   ++ DV+ WS MI+    +G  +EA
Sbjct: 320 IVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 379

Query: 382 IELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVD 441
           ++LF +M+    + N +T + +L+ACSH GL E G  Y   M + Y + P  EHY C++D
Sbjct: 380 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 439

Query: 442 LLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAAS 501
           LLG+AG+L++A  ++  M  + D + W+TLL AC++ +N  +A+  +++++ LDP DA +
Sbjct: 440 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 499

Query: 502 YVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEI 561
           Y LLSNI+A+++ W  V EIR  MRDR +KKEPG SW+E+   +H F +GD SHPQ +E+
Sbjct: 500 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 559

Query: 562 DSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRV 621
              L +L+  +   GYVP+   VL D++ E+ E +L HHSEK A+AF LM +P    IR+
Sbjct: 560 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 619

Query: 622 MKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
            KNLR+C DCH   K  SK+  R I++RD  R+HHF+DG+CSCG+YW
Sbjct: 620 RKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]

BLAST of Carg19249 vs. Swiss-Prot
Match: sp|Q8S9M4|PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H29 PE=2 SV=2)

HSP 1 Score: 681.0 bits (1756), Expect = 1.3e-194
Identity = 386/646 (59.75%), Postives = 477/646 (73.84%), Query Frame = 0


Query: 20  VRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCIKLGSLFGGE 79
           VR LS   ++A      +LCS G + +A++RF+  I+++ SLF+  +QSC    SL  G+
Sbjct: 9   VRPLSVDPATA----IATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGK 68

Query: 80  QVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXXXX 139
           Q+H L++ SG ++DKFI NHL+++YSKLG+  S++ ++  M ++N MS   XXXXXXXXX
Sbjct: 69  QLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNIXXXXXXXXX 128

Query: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSVLR 199
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX                GLG  PDE+TLGSV  
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 188

Query: 200 GCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVA 259
           G AGLRS+  GQ++H   +K G EL+LVV SSLAHMYM++G L DGE +I+SMP+RN+VA
Sbjct: 189 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 248

Query: 260 WNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVI 319
           WNTLI G AQNGC E VL  Y MMK++G RP+KITFV+V+S+CS+LA  GQGQQIHAE I
Sbjct: 249 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 308

Query: 320 KAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIE 379
           K GA SVVAVVSSLISMYS+ GCL D+ K F +RED D V+WS+MI+AYGFHG+G+EAIE
Sbjct: 309 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 368

Query: 380 LFHQM-EELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDL 439
           LF+ M E+  ME N                              Y  KP ++HYTCVVDL
Sbjct: 369 LFNTMAEQTNMEINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGFKPGLKHYTCVVDL 428

Query: 440 LGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASY 499
           LGRAG L++AE +IRSMP+K D +IWKTLLSAC +HKNAEMA+R+ +EIL++DP D+A Y
Sbjct: 429 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 488

Query: 500 VLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEID 559
           VLL+N+HASA+ W DVSE+RK+MRD+NVKKE GISW E K  VHQF MGD+S  +  EI 
Sbjct: 489 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 548

Query: 560 SYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVM 619
           SYLKEL  EMKL GY PD  SVLHDMD EEKE +L  HSEK A+AFALM +PEG PIR++
Sbjct: 549 SYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRII 608

Query: 620 KNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
           KNLRVC+DCH A K IS I+NREI +RD SRFHHF +G+CSCG+YW
Sbjct: 609 KNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650

[Close]

BLAST of Carg19249 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.4e-124
Identity = 231/612 (37.75%), Postives = 344/612 (56.21%), Query Frame = 0


Query: 58  DPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLV-- 117
           D ++F  +L+SC  +  L  GE VH  ++  G   D +  N L+N+Y+KL  + S +   
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163

Query: 118 -LFSHMPRR--NIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
            +F  MP+R  N                                                
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223

Query: 178 XXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSL 237
                         + PD FTL SVL   +    ++ G+E+H  +++ G + ++ +GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 238 AHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDK 297
             MY KS  + D E++   +  R+ ++WN+L+AG  QNG   E L  +  M  A  +P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 298 ITFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVD 357
           + F SVI AC+ LATL  G+Q+H  V++ G GS + + S+L+ MYS+ G ++ + K F  
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 358 REDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKG 417
               D V W+A+I  +  HG G EA+ LF +M+   ++ N+V F+++L ACSH GL ++ 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463

Query: 418 TEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACK 477
             Y + M + Y L   +EHY  V DLLGRAG+LEEA   I  M V+  G +W TLLS+C 
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523

Query: 478 LHKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGI 537
           +HKN E+A++++E+I  +D  +  +YVL+ N++AS   W +++++R  MR + ++K+P  
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583

Query: 538 SWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYN 597
           SW+E+KN  H F  GD+SHP   +I+ +LK +M +M+  GYV D   VLHD+D E K   
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643

Query: 598 LAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHH 657
           L  HSE+ A+AF ++N   G  IRV KN+R+C DCH AIK ISKI  REIIVRD SRFHH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703

Query: 658 FKDGECSCGNYW 665
           F  G CSCG+YW
Sbjct: 704 FNRGNCSCGDYW 715

[Close]

BLAST of Carg19249 vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 2.3e-122
Identity = 229/611 (37.48%), Postives = 348/611 (56.96%), Query Frame = 0


Query: 54   EIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSS 113
            EI  +   +  +L++CI+LG L  GEQ+HS +I +    + ++ + L+++Y+KLG L ++
Sbjct: 485  EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544

Query: 114  LVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 173
              +      ++++S                                              
Sbjct: 545  WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR------------------- 604

Query: 174  XXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLA 233
                        GI  DE  L + +  CAGL++L  GQ++HA     GF  +L   ++L 
Sbjct: 605  ------------GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 664

Query: 234  HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKI 293
             +Y + G + +     +     + +AWN L++G  Q+G +EE L  +  M   G   +  
Sbjct: 665  TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 724

Query: 294  TFVSVISACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDR 353
            TF S + A SE A + QG+Q+HA + K G  S   V ++LISMY++ G + D+ K F++ 
Sbjct: 725  TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 784

Query: 354  EDADVVLWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGT 413
               + V W+A+I AY  HG G EA++ F QM    +  N VT + +L ACSH GL +KG 
Sbjct: 785  STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 844

Query: 414  EYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKL 473
             Y + M  +Y L P+ EHY CVVD+L RAG L  A+  I+ MP+K D ++W+TLLSAC +
Sbjct: 845  AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 904

Query: 474  HKNAEMAKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGIS 533
            HKN E+ +  +  +L+L+P D+A+YVLLSN++A ++ W      R+ M+++ VKKEPG S
Sbjct: 905  HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 964

Query: 534  WLELKNLVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNL 593
            W+E+KN +H F +GD++HP   EI  Y ++L       GYV D  S+L+++ +E+K+  +
Sbjct: 965  WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPII 1024

Query: 594  AHHSEKFAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHF 653
              HSEK AI+F L+++P  VPI VMKNLRVCNDCH  IK +SK+ NREIIVRD  RFHHF
Sbjct: 1025 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1064

Query: 654  KDGECSCGNYW 665
            + G CSC +YW
Sbjct: 1085 EGGACSCKDYW 1064

[Close]

BLAST of Carg19249 vs. Swiss-Prot
Match: sp|Q9S7F4|PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.1e-119
Identity = 228/604 (37.75%), Postives = 345/604 (57.12%), Query Frame = 0


Query: 62  FSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMP 121
           FS +L++ + L     G+Q+H+L +T+G + D  + N +L+ YSK   +  + +LF  MP
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312

Query: 122 RRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
             + +S                                                      
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQC---------------------------- 372

Query: 182 XXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGS 241
              +G     F   ++L   A L SL  G+++H   +    +  L VG+SL  MY K   
Sbjct: 373 ---MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 432

Query: 242 LSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISA 301
             + E + KS+P R  V+W  LI+G  Q G     L  +  M+ +  R D+ TF +V+ A
Sbjct: 433 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 492

Query: 302 CSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLW 361
            +  A+L  G+Q+HA +I++G    V   S L+ MY++ G ++D+V+ F +  D + V W
Sbjct: 493 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 552

Query: 362 SAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVE 421
           +A+I+A+  +G GE AI  F +M E  ++ + V+ L +L ACSHCG  E+GTEY   M  
Sbjct: 553 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 612

Query: 422 QYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAK 481
            Y + P+ +HY C++DLLGR GR  EAE ++  MP + D I+W ++L+AC++HKN  +A+
Sbjct: 613 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 672

Query: 482 RISEEILKLDPL-DAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNL 541
           R +E++  ++ L DAA+YV +SNI+A+A  W  V +++KAMR+R +KK P  SW+E+ + 
Sbjct: 673 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 732

Query: 542 VHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKF 601
           +H FS  D++HP   EI   + EL +E++  GY PD  SV+ D+D + K  +L +HSE+ 
Sbjct: 733 IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERL 792

Query: 602 AIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSC 661
           A+AFAL++ PEG PI VMKNLR C DCH AIK ISKI  REI VRDTSRFHHF +G CSC
Sbjct: 793 AVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSC 825

Query: 662 GNYW 665
           G+YW
Sbjct: 853 GDYW 825

[Close]

BLAST of Carg19249 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 5.8e-118
Identity = 224/647 (34.62%), Postives = 352/647 (54.40%), Query Frame = 0


Query: 22  SLSTKTSSASLQEFTSLCSGGRITQAYERFKS----EIWSDPSLFSHLLQSCIKLGSLFG 81
           S S+   +  L EFT LC    + +A +   S     +W+D + +S L++ CI   ++  
Sbjct: 20  SYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79

Query: 82  GEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXX 141
           G  +   +  +G     F+ N L+N+Y K   L  +  LF  MP+RN++S          
Sbjct: 80  GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139

Query: 142 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSV 201
                                                            + P+ +T  SV
Sbjct: 140 CKIHQKALELLVLMLRD-------------------------------NVRPNVYTYSSV 199

Query: 202 LRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNV 261
           LR C G+  +   + +H  ++K G E ++ V S+L  ++ K G   D   +   M   + 
Sbjct: 200 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 259

Query: 262 VAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAE 321
           + WN++I G AQN  S+  L  +  MK AGF  ++ T  SV+ AC+ LA L  G Q H  
Sbjct: 260 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 319

Query: 322 VIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEA 381
           ++K     ++   ++L+ MY + G LED+++ F   ++ DV+ WS MI+    +G  +EA
Sbjct: 320 IVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 379

Query: 382 IELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVD 441
           ++LF +M+    + N +T + +L+ACSH GL E G  Y   M + Y + P  EHY C++D
Sbjct: 380 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 439

Query: 442 LLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAAS 501
           LLG+AG+L++A  ++  M  + D + W+TLL AC++ +N  +A+  +++++ LDP DA +
Sbjct: 440 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 499

Query: 502 YVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEI 561
           Y LLSNI+A+++ W  V EIR  MRDR +KKEPG SW+E+   +H F +GD SHPQ +E+
Sbjct: 500 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 559

Query: 562 DSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRV 621
              L +L+  +   GYVP+   VL D++ E+ E +L HHSEK A+AF LM +P    IR+
Sbjct: 560 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 619

Query: 622 MKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
            KNLR+C DCH   K  SK+  R I++RD  R+HHF+DG+CSCG+YW
Sbjct: 620 RKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]

BLAST of Carg19249 vs. TrEMBL
Match: tr|A0A1S3C1T8|A0A1S3C1T8_CUCME (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=4 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 599/665 (90.08%), Postives = 629/665 (94.59%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTK-TSSASLQEFTSLCSGGRITQAYERFKSEIWSDP 60
           MGKPS SF+AF +P ++  VRSLS K +SSASLQEFTSLC+ GRI QAY+ FK EIWSDP
Sbjct: 1   MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60

Query: 61  SLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSH 120
           SLFSHLLQSCIKLGSLFGG+QVHSL+ITSG + DKFISNHLLNLYSKLG  KSSLVLFS+
Sbjct: 61  SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNLYSKLGQFKSSLVLFSN 120

Query: 121 MPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           MPRRN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 MPRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
           XXXXGLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 XXXXGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240

Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVI 300
           GSLSDGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300

Query: 301 SACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVV 360
           SACSELATLGQGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+K FVDRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360

Query: 361 LWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
           LWS+MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420

Query: 421 VEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
           V++YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480

Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 540
           AKRISEEI+KLDPLDAASYVLLSNIHASARNWP+VSEIRKAMRDRNV+KEPGISWLELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540

Query: 541 LVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEK 600
           LVHQFSMGDKSHPQY EID YLKELMSE+K HGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600

Query: 601 FAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECS 660
           FAIAFALMN  E VPIRVMKNLRVCNDCH AIKCIS+IRNREIIVRD SRFHHFKDGECS
Sbjct: 601 FAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECS 660

Query: 661 CGNYW 665
           CGNYW
Sbjct: 661 CGNYW 665

[Close]

BLAST of Carg19249 vs. TrEMBL
Match: tr|A0A1S4E0C2|A0A1S4E0C2_CUCME (pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=4 SV=1)

HSP 1 Score: 1004.6 bits (2596), Expect = 1.0e-289
Identity = 515/665 (77.44%), Postives = 547/665 (82.26%), Query Frame = 0


Query: 1   MGKPSRSFDAFFSPLHALAVRSLSTK-TSSASLQEFTSLCSGGRITQAYERFKSEIWSDP 60
           MGKPS SF+AF +P ++  VRSLS K +SSASLQEFTSLC+ GRI QAY+ FK EIWSDP
Sbjct: 1   MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60

Query: 61  SLFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSH 120
           SLFSHLLQSCIKLGSLFGG+Q                          LG+L+++  LF  
Sbjct: 61  SLFSHLLQSCIKLGSLFGGKQ--------------------------LGDLENAQKLFDE 120

Query: 121 MPRRNIMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           M  RNI +                                                    
Sbjct: 121 MSERNIAT-------------------------------WNAMIAGLTQFEFNKQALSLF 180

Query: 181 XXXXGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKS 240
               GLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 KEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240

Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVI 300
           GSLSDGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVL 300

Query: 301 SACSELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVV 360
           SACSELATLGQGQQIHAEVIKAGA SV+AV+SSLISMYSRSGCLEDS+K FVDRED DVV
Sbjct: 301 SACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVV 360

Query: 361 LWSAMIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLM 420
           LWS+MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEYLDLM
Sbjct: 361 LWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLM 420

Query: 421 VEQYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEM 480
           V++YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVK DGIIWKTLL+ACKLHK AEM
Sbjct: 421 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEM 480

Query: 481 AKRISEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKN 540
           AKRISEEI+KLDPLDAASYVLLSNIHASARNWP+VSEIRKAMRDRNV+KEPGISWLELKN
Sbjct: 481 AKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKN 540

Query: 541 LVHQFSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEK 600
           LVHQFSMGDKSHPQY EID YLKELMSE+K HGYVPD+GSVLHDMDNEEKEYNLAHHSEK
Sbjct: 541 LVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEK 600

Query: 601 FAIAFALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECS 660
           FAIAFALMN  E VPIRVMKNLRVCNDCH AIKCIS+IRNREIIVRD SRFHHFKDGECS
Sbjct: 601 FAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECS 608

Query: 661 CGNYW 665
           CGNYW
Sbjct: 661 CGNYW 608

[Close]

BLAST of Carg19249 vs. TrEMBL
Match: tr|A0A2P6RV04|A0A2P6RV04_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0131051 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 3.9e-260
Identity = 491/638 (76.96%), Postives = 557/638 (87.30%), Query Frame = 0


Query: 27  TSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCIKLGSLFGGEQVHSLVI 86
           +S+  +++ T+LCS G I +A+ RFKS++WSDPSLFSHLLQ+CI   SL  G+Q+HSL+I
Sbjct: 6   SSTTCIEQLTTLCSKGLIKEAFGRFKSDLWSDPSLFSHLLQACIPRKSLSLGKQLHSLII 65

Query: 87  TSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXXXXXXXXXXXXXXXXXX 146
           TSGC++DKF+ NHLLNLYSK+G+LKS+  LF H+PRRNIM XXXXXXXXXXXXXXXXXXX
Sbjct: 66  TSGCSSDKFVCNHLLNLYSKIGDLKSASTLFGHLPRRNIMXXXXXXXXXXXXXXXXXXXX 125

Query: 147 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPDEFTLGSVLRGCAGLRS 206
           XXXXXXXXXXXXXXXXXXXXXXX               LG  PDEFTLGSVLRGCAGLR 
Sbjct: 126 XXXXXXXXXXXXXXXXXXXXXXXEYNEEGLGLFSEMHELGFSPDEFTLGSVLRGCAGLRG 185

Query: 207 LLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAG 266
           L AG EVHA ++KCGFE NLVVGSSLAHMYMKSGSL DGEK+IKSMPIRNVVAWNTLIAG
Sbjct: 186 LTAGCEVHAYVVKCGFEFNLVVGSSLAHMYMKSGSLVDGEKVIKSMPIRNVVAWNTLIAG 245

Query: 267 KAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEVIKAGAGSV 326
           KAQNG SE VL+QYNMMK+AGFRPDK+TFVSV+S+CSELATLGQGQQIHAE IKAGA SV
Sbjct: 246 KAQNGQSEGVLDQYNMMKIAGFRPDKVTFVSVLSSCSELATLGQGQQIHAEAIKAGASSV 305

Query: 327 VAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGFHGRGEEAIELFHQMEE 386
           VAV+S+LISMYSR GCLEDS+K F + E ADVVLWS++I+AYGFHGRGEEAI+LF QME+
Sbjct: 306 VAVISTLISMYSRCGCLEDSLKAFRECEGADVVLWSSVISAYGFHGRGEEAIKLFEQMEQ 365

Query: 387 LKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIEHYTCVVDLLGRAGRLE 446
             +EAN+VTFLSLLYACSHCG+KEKG +  DLMV++Y LKP++EHYTCVVDLLGR+G LE
Sbjct: 366 EGLEANDVTFLSLLYACSHCGMKEKGIKLFDLMVQKYGLKPKLEHYTCVVDLLGRSGFLE 425

Query: 447 EAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKLDPLDAASYVLLSNIHA 506
           EAE MIRSMPVKAD IIWKTLLSACK+HKNA+MA+RI +++L+ DP D+ASYVLLSNIHA
Sbjct: 426 EAEAMIRSMPVKADAIIWKTLLSACKIHKNADMARRIGQDVLRQDPEDSASYVLLSNIHA 485

Query: 507 SARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKSHPQYLEIDSYLKELMS 566
           SAR W DVSE+R AMRDR VKKEPGISWLE+KN V+QF MGD  HPQY+ ID YLKEL S
Sbjct: 486 SARRWQDVSEVRTAMRDRKVKKEPGISWLEIKNKVYQFRMGDNCHPQYMAIDLYLKELRS 545

Query: 567 EMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIPEGVPIRVMKNLRVCND 626
           EMKLHGYVPD GSVLHDMDNEEKEY+LAHHSEK AIAFAL+N PEGVP+RVMKNLRVC D
Sbjct: 546 EMKLHGYVPDTGSVLHDMDNEEKEYDLAHHSEKLAIAFALINTPEGVPVRVMKNLRVCID 605

Query: 627 CHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
           CH AIK IS+I+NREIIVRD SRFHHFK G+CSCG+YW
Sbjct: 606 CHVAIKYISQIKNREIIVRDASRFHHFKHGKCSCGDYW 643

[Close]

BLAST of Carg19249 vs. TrEMBL
Match: tr|A0A0A0K2D8|A0A0A0K2D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049200 PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 2.6e-256
Identity = 436/481 (90.64%), Postives = 461/481 (95.84%), Query Frame = 0


Query: 184 GLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLS 243
           GLG LPDEFTLGSVLRGCAGLRSLLAGQEVHACL+KCGFEL+ VVGSSLAHMY+KSGSLS
Sbjct: 70  GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 129

Query: 244 DGEKLIKSMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACS 303
           DGEKLIKSMPIR VVAWNTLIAGKAQNGC EEVLNQYNMMKMAGFRPDKITFVSV+SACS
Sbjct: 130 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 189

Query: 304 ELATLGQGQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSA 363
           ELATLGQGQQIHAEVIKAGA SV+AVVSSLISMYSRSGCLEDS+K FVDRE+ DVVLWS+
Sbjct: 190 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 249

Query: 364 MIAAYGFHGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQY 423
           MIAAYGFHGRGEEA+ELFHQME+LKMEANEVTFLSLLYACSH GLKEKGTEY DLMV++Y
Sbjct: 250 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 309

Query: 424 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRI 483
           KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV+ DGIIWKTLL+ACKLHK AEMA+RI
Sbjct: 310 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 369

Query: 484 SEEILKLDPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQ 543
           SEEI+KLDPLDAASYVLLSNIHASARNW +VS+IRKAMRDR+V+KEPGISWLELKNLVHQ
Sbjct: 370 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 429

Query: 544 FSMGDKSHPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIA 603
           FSMGDKSHPQY EID YLKELMSE+K HGYVP++GSVLHDMDNEEKEYNLAHHSEKFAIA
Sbjct: 430 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 489

Query: 604 FALMNIPEGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNY 663
           FALMN  E VPIRVMKNLRVC+DCH AIKCIS+IRNREIIVRD SRFHHFKDGECSCGNY
Sbjct: 490 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 549

Query: 664 W 665
           W
Sbjct: 550 W 550

[Close]

BLAST of Carg19249 vs. TrEMBL
Match: tr|A0A2I4EZF1|A0A2I4EZF1_9ROSI (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994137 PE=4 SV=1)

HSP 1 Score: 883.2 bits (2281), Expect = 3.5e-253
Identity = 501/654 (76.61%), Postives = 571/654 (87.31%), Query Frame = 0


Query: 11  FFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPSLFSHLLQSCI 70
           FFS   A     LS   S    Q++ +LC  G I +AYER+KSEI+S+PSL S+L+Q+CI
Sbjct: 49  FFSTNAAKTAYKLSDSVSEFK-QDYANLCFKGHIKEAYERYKSEIFSEPSLLSNLIQACI 108

Query: 71  KLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHMPRRNIMSXXX 130
              SL  G+Q+HS++ITSGC  DKF+SNHLLN+YSK+G+L++++ LF HM +RNIMSXXX
Sbjct: 109 PQKSLSLGKQLHSMIITSGCYLDKFVSNHLLNMYSKIGDLRTAVTLFEHMYKRNIMSXXX 168

Query: 131 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGILPD 190
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LG LPD
Sbjct: 169 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLGFLPD 228

Query: 191 EFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSGSLSDGEKLIK 250
           EFTLGSVLR CAGLR L AG ++HA ++KCGFE NLVVGSSLAHMYMKSGSL  GEK+IK
Sbjct: 229 EFTLGSVLRSCAGLRCLHAGWQIHAYVVKCGFEFNLVVGSSLAHMYMKSGSLEGGEKVIK 288

Query: 251 SMPIRNVVAWNTLIAGKAQNGCSEEVLNQYNMMKMAGFRPDKITFVSVISACSELATLGQ 310
            MPIRNV+AWNTLIAGKAQNG  EEVL+QYNMMK+AGFRPDKITFVSV+S+CSELATLGQ
Sbjct: 289 LMPIRNVIAWNTLIAGKAQNGYPEEVLDQYNMMKIAGFRPDKITFVSVLSSCSELATLGQ 348

Query: 311 GQQIHAEVIKAGAGSVVAVVSSLISMYSRSGCLEDSVKTFVDREDADVVLWSAMIAAYGF 370
           GQQIHAE IKAGA SVV+VVSSLISMYSR GCLEDS+K F++ E  DVVLWS+MIAAYGF
Sbjct: 349 GQQIHAEAIKAGACSVVSVVSSLISMYSRCGCLEDSLKAFLECEHTDVVLWSSMIAAYGF 408

Query: 371 HGRGEEAIELFHQMEELKMEANEVTFLSLLYACSHCGLKEKGTEYLDLMVEQYKLKPRIE 430
           HGRG+EAIELF  ME+ ++EANEVTFLSLLYACSHCGLKEKG E+ D MV++Y ++PR+E
Sbjct: 409 HGRGDEAIELFEYMEQEEIEANEVTFLSLLYACSHCGLKEKGIEFFDKMVKKYAVEPRLE 468

Query: 431 HYTCVVDLLGRAGRLEEAEGMIRSMPVKADGIIWKTLLSACKLHKNAEMAKRISEEILKL 490
           HYTC+VDLLGR+G LEEAE MIRSMPVKAD IIWKTLLSACK+HK A+MAKRI+EE+++L
Sbjct: 469 HYTCMVDLLGRSGCLEEAEAMIRSMPVKADVIIWKTLLSACKIHKKADMAKRIAEEVIRL 528

Query: 491 DPLDAASYVLLSNIHASARNWPDVSEIRKAMRDRNVKKEPGISWLELKNLVHQFSMGDKS 550
            P D+A YVLLSNIHASA+ W DVSE+RKAMRDR VKKEPGISWLE+KN VHQF +GDK+
Sbjct: 529 YPQDSAPYVLLSNIHASAKRWQDVSEVRKAMRDRMVKKEPGISWLEVKNAVHQFCIGDKT 588

Query: 551 HPQYLEIDSYLKELMSEMKLHGYVPDIGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNIP 610
           HP+  EID YLKEL SEMKL GYVPD  +VLHDMDNEEKEYNLAHHSEK A+AFALMN P
Sbjct: 589 HPKSAEIDLYLKELTSEMKLRGYVPDTAAVLHDMDNEEKEYNLAHHSEKLAVAFALMNTP 648

Query: 611 EGVPIRVMKNLRVCNDCHEAIKCISKIRNREIIVRDTSRFHHFKDGECSCGNYW 665
            GVPIRVMKNLRVC+DCH AIK IS+IRNREIIVRD SRFHHFK+G+CSCG+YW
Sbjct: 649 AGVPIRVMKNLRVCSDCHVAIKYISEIRNREIIVRDASRFHHFKNGKCSCGDYW 701

The following BLAST results are available for this feature:

BLAST of Carg19249 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553764.1	0.0e+00	99.70	pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pep...	[more]
XP_022953052.1	0.0e+00	99.55	pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata]	[more]
XP_022969026.1	0.0e+00	98.49	pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima]	[more]
XP_022147886.1	0.0e+00	90.81	pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Momordica char...	[more]
XP_008455289.1	0.0e+00	90.08	PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Cuc...	[more]

BLAST of Carg19249 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41080.1	3.4e-177	55.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G23330.1	1.4e-125	37.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G13650.1	1.3e-123	37.48	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G02010.1	1.7e-120	37.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03880.1	3.2e-119	34.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg19249 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S9M4\|PP198_ARATH	1.3e-194	59.75	Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LW63\|PP251_ARATH	2.4e-124	37.75	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
sp\|Q9SVP7\|PP307_ARATH	2.3e-122	37.48	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9S7F4\|PP206_ARATH	3.1e-119	37.75	Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th...	[more]
sp\|Q9SI53\|PP147_ARATH	5.8e-118	34.62	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]

BLAST of Carg19249 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1T8\|A0A1S3C1T8_CUCME	0.0e+00	90.08	pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo...	[more]
tr\|A0A1S4E0C2\|A0A1S4E0C2_CUCME	1.0e-289	77.44	pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo...	[more]
tr\|A0A2P6RV04\|A0A2P6RV04_ROSCH	3.9e-260	76.96	Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS...	[more]
tr\|A0A0A0K2D8\|A0A0A0K2D8_CUCSA	2.6e-256	90.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049200 PE=4 SV=1	[more]
tr\|A0A2I4EZF1\|A0A2I4EZF1_9ROSI	3.5e-253	76.61	pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Juglans regi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR032867	DYW_dom
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19249-RA	Carg19249-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 432..455 e-value: 0.0014 score: 16.6 coord: 359..392 e-value: 4.0E-5 score: 21.5 coord: 127..156 e-value: 7.2E-7 score: 27.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 331..350 e-value: 0.63 score: 10.3 coord: 431..456 e-value: 0.0049 score: 16.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 124..152 e-value: 5.8E-7 score: 29.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 255..302 e-value: 6.8E-10 score: 38.9 coord: 357..404 e-value: 2.0E-9 score: 37.3 coord: 155..202 e-value: 2.2E-9 score: 37.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..458 score: 7.421
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 256..290 score: 10.139
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 225..255 score: 6.095
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 291..325 score: 6.566
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 159..189 score: 6.993
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..422 score: 7.169
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 460..490 score: 5.777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 326..356 score: 5.152
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 93..123 score: 7.366
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 494..528 score: 6.862
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 190..224 score: 6.511
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 58..92 score: 6.643
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 357..391 score: 10.841
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 124..158 score: 12.079
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 330..551 e-value: 6.5E-35 score: 122.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 92..207 e-value: 2.9E-26 score: 93.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 208..321 e-value: 8.2E-19 score: 70.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 372..409 coord: 467..512 coord: 104..148
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 530..654 e-value: 1.8E-41 score: 140.9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 253..581
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 154..258 coord: 18..153
None	No IPR available	PANTHER	PTHR24015:SF806	SUBFAMILY NOT NAMED	coord: 154..258 coord: 253..581 coord: 18..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19249	Cla002240	Watermelon (97103) v1	carwmB0877
Carg19249	Csa7G049200	Cucumber (Chinese Long) v2	carcuB0892
Carg19249	MELO3C018714	Melon (DHL92) v3.5.1	carmeB0864
Carg19249	ClCG07G002580	Watermelon (Charleston Gray)	carwcgB0854
Carg19249	CSPI07G04860	Wild cucumber (PI 183967)	carcpiB0912
Carg19249	Cucsa.195690	Cucumber (Gy14) v1	carcgyB0998
Carg19249	CmaCh19G010050	Cucurbita maxima (Rimu)	carcmaB1214
Carg19249	CmoCh19G010410	Cucurbita moschata (Rifu)	carcmoB1183
Carg19249	Lsi11G017110	Bottle gourd (USVL1VR-Ls)	carlsiB796
Carg19249	CsGy7G004400	Cucumber (Gy14) v2	carcgybB0865
Carg19249	MELO3C018714.2	Melon (DHL92) v3.6.1	carmedB0873
Carg19249	CsaV3_7G005780	Cucumber (Chinese Long) v3	carcucB0916
Carg19249	Cla97C07G130920	Watermelon (97103) v2	carwmbB0917
Carg19249	Bhi05G001678	Wax gourd	carwgoB1023

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19249	Cucurbita pepo (Zucchini)	carcpeB1220
Carg19249	Cucurbita pepo (Zucchini)	carcpeB1223
Carg19249	Cucurbita pepo (Zucchini)	carcpeB1224
Carg19249	Wild cucumber (PI 183967)	carcpiB0911
Carg19249	Cucumber (Chinese Long) v2	carcuB0891
Carg19249	Cucumber (Chinese Long) v3	carcucB0915
Carg19249	Melon (DHL92) v3.5.1	carmeB0865
Carg19249	Melon (DHL92) v3.6.1	carmedB0874
Carg19249	Watermelon (Charleston Gray)	carwcgB0855
Carg19249	Watermelon (97103) v1	carwmB0878
Carg19249	Watermelon (97103) v2	carwmbB0918
Carg19249	Silver-seed gourd	carcarB590
Carg19249	Cucumber (Gy14) v2	carcgybB0864
Carg19249	Cucurbita maxima (Rimu)	carcmaB1211
Carg19249	Cucurbita maxima (Rimu)	carcmaB1212
Carg19249	Cucurbita moschata (Rifu)	carcmoB1179
Carg19249	Cucurbita moschata (Rifu)	carcmoB1180