CsaV3_7G005780 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G005780
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr7 : 3471023 .. 3472853 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGACCCATCTCTGTTTTCTCATCTTCTTCAATCATGCATAAAACTAGGCTCGCTTTTTGGAGGAAAACAGGTCCATTCTTTGATAATTACATCTGGGGGTTCCAAAGACAAGTTCATTTCCAATCATCTTTTAAACTTTTACTCCAAATTAGGACAGTTTAAGTCTTCTTTGGTGCTGTTTAGTAACATGCCACGAAGAAATGTAATGTCGTTTAACATTTTGATCAATGGGTACTTGCAGCTTGGGGATTTGGAAAGCGCCCAAAAGTTGTTTGATGAAATGTCTGAAAGAAACATTGCCACGTGGAATGCGATGATAGCAGGTCTGACCCAGTTTGAATTTAACAAACAAGCTTTAAGTTTGTTTAAAGAAATGTATGGATTGGGTTTTTTGCCTGATGAGTTTACACTAGGCAGTGTACTTAGAGGTTGTGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTCTTGAAATGTGGATTTGAACTGAGTTCGGTAGTGGGCAGCTCTCTAGCTCATATGTATATAAAGTCCGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGTACTGTAGTTGCTTGGAATACTCTTATTGCTGGAAAAGCTCAAAATGGGTGTCCAGAAGAAGTTTTGAACCAGTATAATATGATGAAAATGGCAGGCTTTCGACCGGATAAAATAACATTTGTGAGTGTATTAAGTGCATGTTCGGAGCTGGCGACTTTAGGACAAGGCCAGCAAATCCATGCTGAAGTGATCAAAGCCGGAGCTAGTTCAGTTTTAGCCGTTGTCAGTTCATTGATTAGCATGTATTCACGATCTGGGTGTCTCGAGGACTCTATAAAAGCCTTTGTGGATCGTGAAAATTTTGATGTCGTGTTATGGAGTTCTATGATTGCCGCTTATGGATTCCATGGGAGAGGAGAGGAAGCTCTGGAGCTGTTTCACCAAATGGAAGATTTGAAAATGGAGGCAAATGAAGTGACCTTCTTGAGTCTGCTTTATGCTTGTAGTCACTCTGGATTGAAGGAGAAAGGAACTGAGTATTTTGATTTGATGGTGAAGAAATATAAACTCAAGCCTAGAATTGAACACTACACATGTGTGGTTGATCTGCTTGGTCGGGCTGGCCGGTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTACAACCAGATGGCATTATTTGGAAAACTTTATTAGCAGCCTGCAAACTCCACAAGGAAGCAGAAATGGCCGAACGAATTTCTGAAGAAATTATAAAGCTTGATCCTCTAGATGCTGCTTCCTATGTGCTGCTTTCAAACATCCATGCTTCTGCTAGAAATTGGCTCAACGTTTCCCAGATTAGGAAAGCAATGAGAGACAGGAGCGTCAGGAAGGAACCAGGCATTAGTTGGTTAGAACTCAAAAATTTGGTTCACCAATTTAGCATGGGGGACAAATCTCACCCACAATACTTTGAGATCGATTTGTATTTGAAAGAACTAATGTCCGAACTGAAACAACATGGTTACGTGCCGGAATTAGGCTCGGTTTTGCACGACATGGACAATGAAGAAAAAGAATACAATTTGGCACATCACAGTGAGAAGTTCGCAATTGCTTTTGCACTGATGAATACTTCAGAGAATGTCCCAATAAGAGTGATGAAGAACTTGCGAGTCTGCGATGACTGTCATAATGCCATTAAGTGCATATCAAGGATTAGAAATAGAGAGATTATTGTAAGAGATGCAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

mRNA sequence

ATGGTCAGACCCATCTCTGTTTTCTCATCTTCTTCAATCATGCATAAAACTAGGCTCGCTTTTTGGAGGAAAACAGGTCCATTCTTTGATAATTACATCTGGGGGTTCCAAAGACAAGTTCATTTCCAATCATCTTTTAAACTTTTACTCCAAATTAGGACATTTGAATTTAACAAACAAGCTTTAAGTTTGTTTAAAGAAATGTATGGATTGGGTTTTTTGCCTGATGAGTTTACACTAGGCAGTGTACTTAGAGGTTGTGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTCTTGAAATGTGGATTTGAACTGAGTTCGGTAGTGGGCAGCTCTCTAGCTCATATGTATATAAAGTCCGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGTACTGTAGTTGCTTGGAATACTCTTATTGCTGGAAAAGCTCAAAATGGGTGTCCAGAAGAAGTTTTGAACCAGTATAATATGATGAAAATGGCAGGCTTTCGACCGGATAAAATAACATTTGTGAGTGTATTAAGTGCATGTTCGGAGCTGGCGACTTTAGGACAAGGCCAGCAAATCCATGCTGAAGTGATCAAAGCCGGAGCTAGTTCAGTTTTAGCCGTTGTCAGTTCATTGATTAGCATGTATTCACGATCTGGGTGTCTCGAGGACTCTATAAAAGCCTTTGTGGATCGTGAAAATTTTGATGTCGTGTTATGGAGTTCTATGATTGCCGCTTATGGATTCCATGGGAGAGGAGAGGAAGCTCTGGAGCTGTTTCACCAAATGGAAGATTTGAAAATGGAGGCAAATGAAGTGACCTTCTTGAGTCTGCTTTATGCTTGTAGTCACTCTGGATTGAAGGAGAAAGGAACTGAGTATTTTGATTTGATGGTGAAGAAATATAAACTCAAGCCTAGAATTGAACACTACACATGTGTGGTTGATCTGCTTGGTCGGGCTGGCCGGTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTACAACCAGATGGCATTATTTGGAAAACTTTATTAGCAGCCTGCAAACTCCACAAGGAAGCAGAAATGGCCGAACGAATTTCTGAAGAAATTATAAAGCTTGATCCTCTAGATGCTGCTTCCTATGTGCTGCTTTCAAACATCCATGCTTCTGCTAGAAATTGGCTCAACGTTTCCCAGATTAGGAAAGCAATGAGAGACAGGAGCGTCAGGAAGGAACCAGGCATTAGTTGGTTAGAACTCAAAAATTTGGTTCACCAATTTAGCATGGGGGACAAATCTCACCCACAATACTTTGAGATCGATTTGTATTTGAAAGAACTAATGTCCGAACTGAAACAACATGGTTACGTGCCGGAATTAGGCTCGGTTTTGCACGACATGGACAATGAAGAAAAAGAATACAATTTGGCACATCACAGTGAGAAGTTCGCAATTGCTTTTGCACTGATGAATACTTCAGAGAATGTCCCAATAAGAGTGATGAAGAACTTGCGAGTCTGCGATGACTGTCATAATGCCATTAAGTGCATATCAAGGATTAGAAATAGAGAGATTATTGTAAGAGATGCAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

Coding sequence (CDS)

ATGGTCAGACCCATCTCTGTTTTCTCATCTTCTTCAATCATGCATAAAACTAGGCTCGCTTTTTGGAGGAAAACAGGTCCATTCTTTGATAATTACATCTGGGGGTTCCAAAGACAAGTTCATTTCCAATCATCTTTTAAACTTTTACTCCAAATTAGGACATTTGAATTTAACAAACAAGCTTTAAGTTTGTTTAAAGAAATGTATGGATTGGGTTTTTTGCCTGATGAGTTTACACTAGGCAGTGTACTTAGAGGTTGTGCTGGTTTAAGATCTTTACTTGCAGGTCAAGAGGTTCATGCTTGTCTCTTGAAATGTGGATTTGAACTGAGTTCGGTAGTGGGCAGCTCTCTAGCTCATATGTATATAAAGTCCGGTAGTTTATCTGATGGAGAGAAGTTAATTAAATCAATGCCAATTCGTACTGTAGTTGCTTGGAATACTCTTATTGCTGGAAAAGCTCAAAATGGGTGTCCAGAAGAAGTTTTGAACCAGTATAATATGATGAAAATGGCAGGCTTTCGACCGGATAAAATAACATTTGTGAGTGTATTAAGTGCATGTTCGGAGCTGGCGACTTTAGGACAAGGCCAGCAAATCCATGCTGAAGTGATCAAAGCCGGAGCTAGTTCAGTTTTAGCCGTTGTCAGTTCATTGATTAGCATGTATTCACGATCTGGGTGTCTCGAGGACTCTATAAAAGCCTTTGTGGATCGTGAAAATTTTGATGTCGTGTTATGGAGTTCTATGATTGCCGCTTATGGATTCCATGGGAGAGGAGAGGAAGCTCTGGAGCTGTTTCACCAAATGGAAGATTTGAAAATGGAGGCAAATGAAGTGACCTTCTTGAGTCTGCTTTATGCTTGTAGTCACTCTGGATTGAAGGAGAAAGGAACTGAGTATTTTGATTTGATGGTGAAGAAATATAAACTCAAGCCTAGAATTGAACACTACACATGTGTGGTTGATCTGCTTGGTCGGGCTGGCCGGTTGGAGGAAGCAGAGGGTATGATAAGATCAATGCCTGTACAACCAGATGGCATTATTTGGAAAACTTTATTAGCAGCCTGCAAACTCCACAAGGAAGCAGAAATGGCCGAACGAATTTCTGAAGAAATTATAAAGCTTGATCCTCTAGATGCTGCTTCCTATGTGCTGCTTTCAAACATCCATGCTTCTGCTAGAAATTGGCTCAACGTTTCCCAGATTAGGAAAGCAATGAGAGACAGGAGCGTCAGGAAGGAACCAGGCATTAGTTGGTTAGAACTCAAAAATTTGGTTCACCAATTTAGCATGGGGGACAAATCTCACCCACAATACTTTGAGATCGATTTGTATTTGAAAGAACTAATGTCCGAACTGAAACAACATGGTTACGTGCCGGAATTAGGCTCGGTTTTGCACGACATGGACAATGAAGAAAAAGAATACAATTTGGCACATCACAGTGAGAAGTTCGCAATTGCTTTTGCACTGATGAATACTTCAGAGAATGTCCCAATAAGAGTGATGAAGAACTTGCGAGTCTGCGATGACTGTCATAATGCCATTAAGTGCATATCAAGGATTAGAAATAGAGAGATTATTGTAAGAGATGCAAGTAGATTTCACCATTTCAAGGACGGTGAATGTTCTTGTGGTAATTATTGGTAG

Protein sequence

MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW

Homology

[Close]

BLAST of CsaV3_7G005780 vs. NCBI nr
Match: KGN43638.1 (hypothetical protein Csa_7G049200 [Cucumis sativus])

HSP 1 Score: 1107.0 bits (2862), Expect = 0.0e+00
Identity = 550/550 (100.00%), Postives = 550/550 (100.00%), Query Frame = 0


Query: 1   MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQ 60
           MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQ
Sbjct: 1   MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQ 60

Query: 61  ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 120
           ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH
Sbjct: 61  ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 120

Query: 121 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 180
           MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT
Sbjct: 121 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 180

Query: 181 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE 240
           FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE
Sbjct: 181 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE 240

Query: 241 NFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTE 300
           NFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTE
Sbjct: 241 NFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTE 300

Query: 301 YFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH 360
           YFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH
Sbjct: 301 YFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH 360

Query: 361 KEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISW 420
           KEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISW
Sbjct: 361 KEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISW 420

Query: 421 LELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLA 480
           LELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLA
Sbjct: 421 LELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLA 480

Query: 481 HHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFK 540
           HHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFK
Sbjct: 481 HHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFK 540

Query: 541 DGECSCGNYW 551
           DGECSCGNYW
Sbjct: 541 DGECSCGNYW 550

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BLAST of CsaV3_7G005780 vs. NCBI nr
Match: XP_016901687.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X2 [Cucumis melo])

HSP 1 Score: 979.2 bits (2530), Expect = 5.9e-282
Identity = 484/503 (96.22%), Postives = 497/503 (98.81%), Query Frame = 0


Query: 48  LLLQIRTFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG 107
           ++  +  FEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG
Sbjct: 106 MIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG 165

Query: 108 FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN 167
           FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN
Sbjct: 166 FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN 225

Query: 168 MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSG 227
           MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAV+SSLISMYSRSG
Sbjct: 226 MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSG 285

Query: 228 CLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLY 287
           CLEDSIKAFVDRE+FDVVLWSSMIAAYGFHGRGEEA+ELFHQMEDLKMEANEVTFLSLLY
Sbjct: 286 CLEDSIKAFVDREDFDVVLWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLY 345

Query: 288 ACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDG 347
           ACSHSGLKEKGTEY DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV+PDG
Sbjct: 346 ACSHSGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDG 405

Query: 348 IIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAM 407
           IIWKTLLAACKLHKEAEMA+RISEEIIKLDPLDAASYVLLSNIHASARNW NVS+IRKAM
Sbjct: 406 IIWKTLLAACKLHKEAEMAKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAM 465

Query: 408 RDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVL 467
           RDR+VRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELK+HGYVP+LGSVL
Sbjct: 466 RDRNVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVL 525

Query: 468 HDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNRE 527
           HDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVC+DCHNAIKCISRIRNRE
Sbjct: 526 HDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNRE 585

Query: 528 IIVRDASRFHHFKDGECSCGNYW 551
           IIVRDASRFHHFKDGECSCGNYW
Sbjct: 586 IIVRDASRFHHFKDGECSCGNYW 608

[Close]

BLAST of CsaV3_7G005780 vs. NCBI nr
Match: XP_004137032.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g41080 [Cucumis sativus])

HSP 1 Score: 968.0 bits (2501), Expect = 1.4e-278
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0


Query: 70  GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 129
           GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS
Sbjct: 187 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 246

Query: 130 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 189
           DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS
Sbjct: 247 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 306

Query: 190 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 249
           ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS
Sbjct: 307 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 366

Query: 250 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 309
           MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY
Sbjct: 367 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 426

Query: 310 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 369
           KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI
Sbjct: 427 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 486

Query: 370 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 429
           SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ
Sbjct: 487 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 546

Query: 430 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 489
           FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA
Sbjct: 547 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 606

Query: 490 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 549
           FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY
Sbjct: 607 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 666

Query: 550 W 551
           W
Sbjct: 667 W 667

[Close]

BLAST of CsaV3_7G005780 vs. NCBI nr
Match: XP_008455289.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Cucumis melo])

HSP 1 Score: 949.5 bits (2453), Expect = 5.0e-273
Identity = 469/481 (97.51%), Postives = 479/481 (99.58%), Query Frame = 0


Query: 70  GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 129
           GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS
Sbjct: 185 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 244

Query: 130 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 189
           DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS
Sbjct: 245 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 304

Query: 190 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 249
           ELATLGQGQQIHAEVIKAGASSVLAV+SSLISMYSRSGCLEDSIKAFVDRE+FDVVLWSS
Sbjct: 305 ELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVVLWSS 364

Query: 250 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 309
           MIAAYGFHGRGEEA+ELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEY DLMVKKY
Sbjct: 365 MIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLMVKKY 424

Query: 310 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 369
           KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV+PDGIIWKTLLAACKLHKEAEMA+RI
Sbjct: 425 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEMAKRI 484

Query: 370 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 429
           SEEIIKLDPLDAASYVLLSNIHASARNW NVS+IRKAMRDR+VRKEPGISWLELKNLVHQ
Sbjct: 485 SEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKNLVHQ 544

Query: 430 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 489
           FSMGDKSHPQYFEIDLYLKELMSELK+HGYVP+LGSVLHDMDNEEKEYNLAHHSEKFAIA
Sbjct: 545 FSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEKFAIA 604

Query: 490 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 549
           FALMNTSENVPIRVMKNLRVC+DCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY
Sbjct: 605 FALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 664

Query: 550 W 551
           W
Sbjct: 665 W 665

[Close]

BLAST of CsaV3_7G005780 vs. NCBI nr
Match: XP_022147887.1 (pentatricopeptide repeat-containing protein At2g41080 isoform X2 [Momordica charantia])

HSP 1 Score: 929.1 bits (2400), Expect = 7.0e-267
Identity = 456/566 (80.57%), Postives = 506/566 (89.40%), Query Frame = 0


Query: 1   MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQV-HFQSSFKL----------- 60
           MVRPIS+  S+ I+H+ RL FWR+   FF +YIW F  Q+   +S+ KL           
Sbjct: 1   MVRPISLLPSAPILHRNRLNFWREAASFFGHYIWVFPGQLGDLESAQKLFDEMSERNIAT 60

Query: 61  ----LLQIRTFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLL 120
               +  +  FEFN+QALSLF+EMYGLGFLPDEFTLGSVLRGCAGLRS+ AGQEVHACL+
Sbjct: 61  WNAMITGLTQFEFNEQALSLFREMYGLGFLPDEFTLGSVLRGCAGLRSIRAGQEVHACLM 120

Query: 121 KCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLN 180
           KCGFEL+ VVGSS+AHMY+KSGSLSDGEK+IKSMP R VVAWNTLIAGKAQNGC EEVLN
Sbjct: 121 KCGFELNLVVGSSVAHMYMKSGSLSDGEKVIKSMPTRNVVAWNTLIAGKAQNGCSEEVLN 180

Query: 181 QYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYS 240
           QYNMMKMAGFRPDKITFVSV+SACSELATLGQGQQIHAE IKAGA SV+AV+SSLISMYS
Sbjct: 181 QYNMMKMAGFRPDKITFVSVISACSELATLGQGQQIHAEAIKAGAGSVVAVISSLISMYS 240

Query: 241 RSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLS 300
           RSGCL+DS+KAF+DRE+ DVVLWS+MIAAYGFHGRGEE +ELFHQME+LKMEANEVTFLS
Sbjct: 241 RSGCLDDSVKAFLDREDADVVLWSAMIAAYGFHGRGEEVIELFHQMEELKMEANEVTFLS 300

Query: 301 LLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQ 360
           LLYACSH GLKEKGTEY DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAE  IRSMPV+
Sbjct: 301 LLYACSHCGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEATIRSMPVK 360

Query: 361 PDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIR 420
            DGIIWKTLL+ACK+HK+AEMA+RISE+I+KLDPLDAASYVLLSNIHASARNW +VS+IR
Sbjct: 361 ADGIIWKTLLSACKIHKKAEMAKRISEDILKLDPLDAASYVLLSNIHASARNWPDVSEIR 420

Query: 421 KAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELG 480
           KAMRDR VRKEPGISWLELK+ VHQF+M DKSHP+Y EI+LYLKELM+E+K  GYVP++G
Sbjct: 421 KAMRDRQVRKEPGISWLELKSTVHQFNMSDKSHPKYLEIELYLKELMAEMKLQGYVPDIG 480

Query: 481 SVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIR 540
           SVLHDMDNEEKEYNLAHHSEK AIAFALMNT E+ PIRVMKNLRVC DCH+AIKCIS+IR
Sbjct: 481 SVLHDMDNEEKEYNLAHHSEKLAIAFALMNTPESAPIRVMKNLRVCSDCHDAIKCISKIR 540

Query: 541 NREIIVRDASRFHHFKDGECSCGNYW 551
           NREIIVRDASRFHHF+DGECSCGNYW
Sbjct: 541 NREIIVRDASRFHHFRDGECSCGNYW 566

[Close]

BLAST of CsaV3_7G005780 vs. TAIR10
Match: AT2G41080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 610.5 bits (1573), Expect = 1.0e-174
Identity = 301/497 (60.56%), Postives = 374/497 (75.25%), Query Frame = 0


Query: 55  FEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVV 114
           FEFN++ LSLF+EM+GLGF PDE+TLGSV  G AGLRS+  GQ++H   +K G EL  VV
Sbjct: 69  FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVV 128

Query: 115 GSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGF 174
            SSLAHMY+++G L DGE +I+SMP+R +VAWNTLI G AQNGCPE VL  Y MMK++G 
Sbjct: 129 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 188

Query: 175 RPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIK 234
           RP+KITFV+VLS+CS+LA  GQGQQIHAE IK GASSV+AVVSSLISMYS+ GCL D+ K
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 248

Query: 235 AFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQM-EDLKMEANEVTFLSLLYACSHSG 294
           AF +RE+ D V+WSSMI+AYGFHG+G+EA+ELF+ M E   ME N               
Sbjct: 249 AFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINXXXXXXXXXXXXXXX 308

Query: 295 LKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTL 354
                          Y  KP ++HYTCVVDLLGRAG L++AE +IRSMP++ D +IWKTL
Sbjct: 309 XXXXXXXXXXXXXXXYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 368

Query: 355 LAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVR 414
           L+AC +HK AEMA+R+ +EI+++DP D+A YVLL+N+HASA+ W +VS++RK+MRD++V+
Sbjct: 369 LSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 428

Query: 415 KEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNE 474
           KE GISW E K  VHQF MGD+S  +  EI  YLKEL  E+K  GY P+  SVLHDMD E
Sbjct: 429 KEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEE 488

Query: 475 EKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDA 534
           EKE +L  HSEK A+AFALM   E  PIR++KNLRVC DCH A K IS I+NREI +RD 
Sbjct: 489 EKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDG 548

Query: 535 SRFHHFKDGECSCGNYW 551
           SRFHHF +G+CSCG+YW
Sbjct: 549 SRFHHFINGKCSCGDYW 565

[Close]

BLAST of CsaV3_7G005780 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 432.6 bits (1111), Expect = 3.7e-121
Identity = 208/492 (42.28%), Postives = 308/492 (62.60%), Query Frame = 0


Query: 59  KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 118
           + AL + +EM      PD FTL SVL   +    ++ G+E+H  +++ G +    +GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 119 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 178
             MY KS  + D E++   +  R  ++WN+L+AG  QNG   E L  +  M  A  +P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 179 ITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVD 238
           + F SV+ AC+ LATL  G+Q+H  V++ G  S + + S+L+ MYS+ G ++ + K F  
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 239 RENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 298
               D V W+++I  +  HG G EA+ LF +M+   ++ N+V F+++L ACSH GL ++ 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463

Query: 299 TEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACK 358
             YF+ M K Y L   +EHY  V DLLGRAG+LEEA   I  M V+P G +W TLL++C 
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523

Query: 359 LHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGI 418
           +HK  E+AE+++E+I  +D  +  +YVL+ N++AS   W  ++++R  MR + +RK+P  
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583

Query: 419 SWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYN 478
           SW+E+KN  H F  GD+SHP   +I+ +LK +M ++++ GYV +   VLHD+D E K   
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643

Query: 479 LAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHH 538
           L  HSE+ A+AF ++NT     IRV KN+R+C DCH AIK IS+I  REIIVRD SRFHH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703

Query: 539 FKDGECSCGNYW 551
           F  G CSCG+YW
Sbjct: 704 FNRGNCSCGDYW 715

[Close]

BLAST of CsaV3_7G005780 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 428.3 bits (1100), Expect = 7.0e-120
Identity = 214/546 (39.19%), Postives = 337/546 (61.72%), Query Frame = 0


Query: 5   ISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQALSL 64
           I  +S +  M +  + F R     FD   W      + QS               + L L
Sbjct: 459 IDAYSRNRCMKEAEILFERHN---FDLVAWNAMMAGYTQS-----------HDGHKTLKL 518

Query: 65  FKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 124
           F  M+  G   D+FTL +V + C  L ++  G++VHA  +K G++L   V S +  MY+K
Sbjct: 519 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 578

Query: 125 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 184
            G +S  +    S+P+   VAW T+I+G  +NG  E   + ++ M++ G  PD+ T  ++
Sbjct: 579 CGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 638

Query: 185 LSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDV 244
             A S L  L QG+QIHA  +K   ++   V +SL+ MY++ G ++D+   F   E  ++
Sbjct: 639 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 698

Query: 245 VLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDL 304
             W++M+     HG G+E L+LF QM+ L ++ ++VTF+ +L ACSHSGL  +  ++   
Sbjct: 699 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRS 758

Query: 305 MVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAE 364
           M   Y +KP IEHY+C+ D LGRAG +++AE +I SM ++    +++TLLAAC++  + E
Sbjct: 759 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 818

Query: 365 MAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELK 424
             +R++ ++++L+PLD+++YVLLSN++A+A  W  +   R  M+   V+K+PG SW+E+K
Sbjct: 819 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 878

Query: 425 NLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSE 484
           N +H F + D+S+ Q   I   +K+++ ++KQ GYVPE    L D++ EEKE  L +HSE
Sbjct: 879 NKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSE 938

Query: 485 KFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGEC 544
           K A+AF L++T  + PIRV+KNLRVC DCHNA+K I+++ NREI++RDA+RFH FKDG C
Sbjct: 939 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 990

Query: 545 SCGNYW 551
           SCG+YW
Sbjct: 999 SCGDYW 990

[Close]

BLAST of CsaV3_7G005780 vs. TAIR10
Match: AT3G49710.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 424.9 bits (1091), Expect = 7.8e-119
Identity = 220/499 (44.09%), Postives = 318/499 (63.73%), Query Frame = 0


Query: 60  QALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLA 119
           +AL+L+KEM   GF  D FTL SVL     L  L+ G++ H  L+K GF  +S VGS L 
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282

Query: 120 HMYIKSG---SLSDGEKLIKSMPIRTVVAWNTLIAGKAQN-GCPEEVLNQYNMMKMAGFR 179
             Y K G    + D EK+ + +    +V WNT+I+G + N    EE +  +  M+  G R
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342

Query: 180 PDKITFVSVLSACSELATLGQGQQIHAEVIKAG-ASSVLAVVSSLISMYSRSGCLEDSIK 239
           PD  +FV V SACS L++  Q +QIH   IK+   S+ ++V ++LIS+Y +SG L+D+  
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402

Query: 240 AFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGL 299
            F      + V ++ MI  Y  HG G EAL L+ +M D  +  N++TF+++L AC+H G 
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462

Query: 300 KEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 359
            ++G EYF+ M + +K++P  EHY+C++DLLGRAG+LEEAE  I +MP +P  + W  LL
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522

Query: 360 AACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRK 419
            AC+ HK   +AER + E++ + PL A  YV+L+N++A AR W  ++ +RK+MR + +RK
Sbjct: 523 GACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRK 582

Query: 420 EPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYV--PELGSVLHDMDN 479
           +PG SW+E+K   H F   D SHP   E++ YL+E+M ++K+ GYV   +   V  D   
Sbjct: 583 KPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAG 642

Query: 480 E-EKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVR 539
           E ++E  L HHSEK A+AF LM+T +   + V+KNLR+C DCHNAIK +S +  REIIVR
Sbjct: 643 EGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVR 702

Query: 540 DASRFHHFKDGECSCGNYW 551
           D  RFH FKDG+CSCG+YW
Sbjct: 703 DNLRFHCFKDGKCSCGDYW 721

[Close]

BLAST of CsaV3_7G005780 vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 420.6 bits (1080), Expect = 1.5e-117
Identity = 206/496 (41.53%), Postives = 310/496 (62.50%), Query Frame = 0


Query: 55   FEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVV 114
            + F+ +AL+ F++M   G   DE  L + +  CAGL++L  GQ++HA     GF      
Sbjct: 569  YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628

Query: 115  GSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGF 174
             ++L  +Y + G + +     +       +AWN L++G  Q+G  EE L  +  M   G 
Sbjct: 629  QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688

Query: 175  RPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIK 234
              +  TF S + A SE A + QG+Q+HA + K G  S   V ++LISMY++ G + D+ K
Sbjct: 689  DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748

Query: 235  AFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGL 294
             F++    + V W+++I AY  HG G EAL+ F QM    +  N VT + +L ACSH GL
Sbjct: 749  QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808

Query: 295  KEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 354
             +KG  YF+ M  +Y L P+ EHY CVVD+L RAG L  A+  I+ MP++PD ++W+TLL
Sbjct: 809  VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868

Query: 355  AACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRK 414
            +AC +HK  E+ E  +  +++L+P D+A+YVLLSN++A ++ W      R+ M+++ V+K
Sbjct: 869  SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928

Query: 415  EPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEE 474
            EPG SW+E+KN +H F +GD++HP   EI  Y ++L     + GYV +  S+L+++ +E+
Sbjct: 929  EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQ 988

Query: 475  KEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDAS 534
            K+  +  HSEK AI+F L++    VPI VMKNLRVC+DCH  IK +S++ NREIIVRDA 
Sbjct: 989  KDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAY 1048

Query: 535  RFHHFKDGECSCGNYW 551
            RFHHF+ G CSC +YW
Sbjct: 1049 RFHHFEGGACSCKDYW 1064

[Close]

BLAST of CsaV3_7G005780 vs. Swiss-Prot
Match: sp|Q8S9M4|PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H29 PE=2 SV=2)

HSP 1 Score: 610.5 bits (1573), Expect = 1.8e-173
Identity = 301/497 (60.56%), Postives = 374/497 (75.25%), Query Frame = 0


Query: 55  FEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVV 114
           FEFN++ LSLF+EM+GLGF PDE+TLGSV  G AGLRS+  GQ++H   +K G EL  VV
Sbjct: 154 FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVV 213

Query: 115 GSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGF 174
            SSLAHMY+++G L DGE +I+SMP+R +VAWNTLI G AQNGCPE VL  Y MMK++G 
Sbjct: 214 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 273

Query: 175 RPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIK 234
           RP+KITFV+VLS+CS+LA  GQGQQIHAE IK GASSV+AVVSSLISMYS+ GCL D+ K
Sbjct: 274 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 333

Query: 235 AFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQM-EDLKMEANEVTFLSLLYACSHSG 294
           AF +RE+ D V+WSSMI+AYGFHG+G+EA+ELF+ M E   ME N               
Sbjct: 334 AFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINXXXXXXXXXXXXXXX 393

Query: 295 LKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTL 354
                          Y  KP ++HYTCVVDLLGRAG L++AE +IRSMP++ D +IWKTL
Sbjct: 394 XXXXXXXXXXXXXXXYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 453

Query: 355 LAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVR 414
           L+AC +HK AEMA+R+ +EI+++DP D+A YVLL+N+HASA+ W +VS++RK+MRD++V+
Sbjct: 454 LSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 513

Query: 415 KEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNE 474
           KE GISW E K  VHQF MGD+S  +  EI  YLKEL  E+K  GY P+  SVLHDMD E
Sbjct: 514 KEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEE 573

Query: 475 EKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDA 534
           EKE +L  HSEK A+AFALM   E  PIR++KNLRVC DCH A K IS I+NREI +RD 
Sbjct: 574 EKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDG 633

Query: 535 SRFHHFKDGECSCGNYW 551
           SRFHHF +G+CSCG+YW
Sbjct: 634 SRFHHFINGKCSCGDYW 650

[Close]

BLAST of CsaV3_7G005780 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 6.7e-120
Identity = 208/492 (42.28%), Postives = 308/492 (62.60%), Query Frame = 0


Query: 59  KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 118
           + AL + +EM      PD FTL SVL   +    ++ G+E+H  +++ G +    +GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 119 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 178
             MY KS  + D E++   +  R  ++WN+L+AG  QNG   E L  +  M  A  +P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 179 ITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVD 238
           + F SV+ AC+ LATL  G+Q+H  V++ G  S + + S+L+ MYS+ G ++ + K F  
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 239 RENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKG 298
               D V W+++I  +  HG G EA+ LF +M+   ++ N+V F+++L ACSH GL ++ 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463

Query: 299 TEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACK 358
             YF+ M K Y L   +EHY  V DLLGRAG+LEEA   I  M V+P G +W TLL++C 
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523

Query: 359 LHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGI 418
           +HK  E+AE+++E+I  +D  +  +YVL+ N++AS   W  ++++R  MR + +RK+P  
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583

Query: 419 SWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYN 478
           SW+E+KN  H F  GD+SHP   +I+ +LK +M ++++ GYV +   VLHD+D E K   
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643

Query: 479 LAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHH 538
           L  HSE+ A+AF ++NT     IRV KN+R+C DCH AIK IS+I  REIIVRD SRFHH
Sbjct: 644 LFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHH 703

Query: 539 FKDGECSCGNYW 551
           F  G CSCG+YW
Sbjct: 704 FNRGNCSCGDYW 715

[Close]

BLAST of CsaV3_7G005780 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.3e-118
Identity = 214/546 (39.19%), Postives = 337/546 (61.72%), Query Frame = 0


Query: 5   ISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQALSL 64
           I  +S +  M +  + F R     FD   W      + QS               + L L
Sbjct: 459 IDAYSRNRCMKEAEILFERHN---FDLVAWNAMMAGYTQS-----------HDGHKTLKL 518

Query: 65  FKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 124
           F  M+  G   D+FTL +V + C  L ++  G++VHA  +K G++L   V S +  MY+K
Sbjct: 519 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 578

Query: 125 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 184
            G +S  +    S+P+   VAW T+I+G  +NG  E   + ++ M++ G  PD+ T  ++
Sbjct: 579 CGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 638

Query: 185 LSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDV 244
             A S L  L QG+QIHA  +K   ++   V +SL+ MY++ G ++D+   F   E  ++
Sbjct: 639 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 698

Query: 245 VLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDL 304
             W++M+     HG G+E L+LF QM+ L ++ ++VTF+ +L ACSHSGL  +  ++   
Sbjct: 699 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRS 758

Query: 305 MVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAE 364
           M   Y +KP IEHY+C+ D LGRAG +++AE +I SM ++    +++TLLAAC++  + E
Sbjct: 759 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 818

Query: 365 MAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELK 424
             +R++ ++++L+PLD+++YVLLSN++A+A  W  +   R  M+   V+K+PG SW+E+K
Sbjct: 819 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 878

Query: 425 NLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSE 484
           N +H F + D+S+ Q   I   +K+++ ++KQ GYVPE    L D++ EEKE  L +HSE
Sbjct: 879 NKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSE 938

Query: 485 KFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGEC 544
           K A+AF L++T  + PIRV+KNLRVC DCHNA+K I+++ NREI++RDA+RFH FKDG C
Sbjct: 939 KLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGIC 990

Query: 545 SCGNYW 551
           SCG+YW
Sbjct: 999 SCGDYW 990

[Close]

BLAST of CsaV3_7G005780 vs. Swiss-Prot
Match: sp|Q9M2Y7|PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-117
Identity = 220/499 (44.09%), Postives = 318/499 (63.73%), Query Frame = 0


Query: 60  QALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLA 119
           +AL+L+KEM   GF  D FTL SVL     L  L+ G++ H  L+K GF  +S VGS L 
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282

Query: 120 HMYIKSG---SLSDGEKLIKSMPIRTVVAWNTLIAGKAQN-GCPEEVLNQYNMMKMAGFR 179
             Y K G    + D EK+ + +    +V WNT+I+G + N    EE +  +  M+  G R
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342

Query: 180 PDKITFVSVLSACSELATLGQGQQIHAEVIKAG-ASSVLAVVSSLISMYSRSGCLEDSIK 239
           PD  +FV V SACS L++  Q +QIH   IK+   S+ ++V ++LIS+Y +SG L+D+  
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402

Query: 240 AFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGL 299
            F      + V ++ MI  Y  HG G EAL L+ +M D  +  N++TF+++L AC+H G 
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462

Query: 300 KEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 359
            ++G EYF+ M + +K++P  EHY+C++DLLGRAG+LEEAE  I +MP +P  + W  LL
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522

Query: 360 AACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRK 419
            AC+ HK   +AER + E++ + PL A  YV+L+N++A AR W  ++ +RK+MR + +RK
Sbjct: 523 GACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRK 582

Query: 420 EPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYV--PELGSVLHDMDN 479
           +PG SW+E+K   H F   D SHP   E++ YL+E+M ++K+ GYV   +   V  D   
Sbjct: 583 KPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAG 642

Query: 480 E-EKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVR 539
           E ++E  L HHSEK A+AF LM+T +   + V+KNLR+C DCHNAIK +S +  REIIVR
Sbjct: 643 EGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVR 702

Query: 540 DASRFHHFKDGECSCGNYW 551
           D  RFH FKDG+CSCG+YW
Sbjct: 703 DNLRFHCFKDGKCSCGDYW 721

[Close]

BLAST of CsaV3_7G005780 vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 420.6 bits (1080), Expect = 2.6e-116
Identity = 206/496 (41.53%), Postives = 310/496 (62.50%), Query Frame = 0


Query: 55   FEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVV 114
            + F+ +AL+ F++M   G   DE  L + +  CAGL++L  GQ++HA     GF      
Sbjct: 569  YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628

Query: 115  GSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGF 174
             ++L  +Y + G + +     +       +AWN L++G  Q+G  EE L  +  M   G 
Sbjct: 629  QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688

Query: 175  RPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIK 234
              +  TF S + A SE A + QG+Q+HA + K G  S   V ++LISMY++ G + D+ K
Sbjct: 689  DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748

Query: 235  AFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGL 294
             F++    + V W+++I AY  HG G EAL+ F QM    +  N VT + +L ACSH GL
Sbjct: 749  QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808

Query: 295  KEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 354
             +KG  YF+ M  +Y L P+ EHY CVVD+L RAG L  A+  I+ MP++PD ++W+TLL
Sbjct: 809  VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868

Query: 355  AACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRK 414
            +AC +HK  E+ E  +  +++L+P D+A+YVLLSN++A ++ W      R+ M+++ V+K
Sbjct: 869  SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928

Query: 415  EPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEE 474
            EPG SW+E+KN +H F +GD++HP   EI  Y ++L     + GYV +  S+L+++ +E+
Sbjct: 929  EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQ 988

Query: 475  KEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDAS 534
            K+  +  HSEK AI+F L++    VPI VMKNLRVC+DCH  IK +S++ NREIIVRDA 
Sbjct: 989  KDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAY 1048

Query: 535  RFHHFKDGECSCGNYW 551
            RFHHF+ G CSC +YW
Sbjct: 1049 RFHHFEGGACSCKDYW 1064

[Close]

BLAST of CsaV3_7G005780 vs. TrEMBL
Match: tr|A0A0A0K2D8|A0A0A0K2D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049200 PE=4 SV=1)

HSP 1 Score: 1107.0 bits (2862), Expect = 0.0e+00
Identity = 550/550 (100.00%), Postives = 550/550 (100.00%), Query Frame = 0


Query: 1   MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQ 60
           MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQ
Sbjct: 1   MVRPISVFSSSSIMHKTRLAFWRKTGPFFDNYIWGFQRQVHFQSSFKLLLQIRTFEFNKQ 60

Query: 61  ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 120
           ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH
Sbjct: 61  ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 120

Query: 121 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 180
           MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT
Sbjct: 121 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 180

Query: 181 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE 240
           FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE
Sbjct: 181 FVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRE 240

Query: 241 NFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTE 300
           NFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTE
Sbjct: 241 NFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTE 300

Query: 301 YFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH 360
           YFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH
Sbjct: 301 YFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLH 360

Query: 361 KEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISW 420
           KEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISW
Sbjct: 361 KEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISW 420

Query: 421 LELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLA 480
           LELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLA
Sbjct: 421 LELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLA 480

Query: 481 HHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFK 540
           HHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFK
Sbjct: 481 HHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFK 540

Query: 541 DGECSCGNYW 551
           DGECSCGNYW
Sbjct: 541 DGECSCGNYW 550

[Close]

BLAST of CsaV3_7G005780 vs. TrEMBL
Match: tr|A0A1S4E0C2|A0A1S4E0C2_CUCME (pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=4 SV=1)

HSP 1 Score: 979.2 bits (2530), Expect = 3.9e-282
Identity = 484/503 (96.22%), Postives = 497/503 (98.81%), Query Frame = 0


Query: 48  LLLQIRTFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG 107
           ++  +  FEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG
Sbjct: 106 MIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCG 165

Query: 108 FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN 167
           FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN
Sbjct: 166 FELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN 225

Query: 168 MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSG 227
           MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAV+SSLISMYSRSG
Sbjct: 226 MMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSG 285

Query: 228 CLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLY 287
           CLEDSIKAFVDRE+FDVVLWSSMIAAYGFHGRGEEA+ELFHQMEDLKMEANEVTFLSLLY
Sbjct: 286 CLEDSIKAFVDREDFDVVLWSSMIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLY 345

Query: 288 ACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDG 347
           ACSHSGLKEKGTEY DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV+PDG
Sbjct: 346 ACSHSGLKEKGTEYLDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDG 405

Query: 348 IIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAM 407
           IIWKTLLAACKLHKEAEMA+RISEEIIKLDPLDAASYVLLSNIHASARNW NVS+IRKAM
Sbjct: 406 IIWKTLLAACKLHKEAEMAKRISEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAM 465

Query: 408 RDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVL 467
           RDR+VRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELK+HGYVP+LGSVL
Sbjct: 466 RDRNVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVL 525

Query: 468 HDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNRE 527
           HDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVC+DCHNAIKCISRIRNRE
Sbjct: 526 HDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNRE 585

Query: 528 IIVRDASRFHHFKDGECSCGNYW 551
           IIVRDASRFHHFKDGECSCGNYW
Sbjct: 586 IIVRDASRFHHFKDGECSCGNYW 608

[Close]

BLAST of CsaV3_7G005780 vs. TrEMBL
Match: tr|A0A1S3C1T8|A0A1S3C1T8_CUCME (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=4 SV=1)

HSP 1 Score: 949.5 bits (2453), Expect = 3.3e-273
Identity = 469/481 (97.51%), Postives = 479/481 (99.58%), Query Frame = 0


Query: 70  GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 129
           GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS
Sbjct: 185 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLS 244

Query: 130 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 189
           DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS
Sbjct: 245 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 304

Query: 190 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSS 249
           ELATLGQGQQIHAEVIKAGASSVLAV+SSLISMYSRSGCLEDSIKAFVDRE+FDVVLWSS
Sbjct: 305 ELATLGQGQQIHAEVIKAGASSVLAVISSLISMYSRSGCLEDSIKAFVDREDFDVVLWSS 364

Query: 250 MIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKY 309
           MIAAYGFHGRGEEA+ELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEY DLMVKKY
Sbjct: 365 MIAAYGFHGRGEEAVELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYLDLMVKKY 424

Query: 310 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 369
           KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV+PDGIIWKTLLAACKLHKEAEMA+RI
Sbjct: 425 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVKPDGIIWKTLLAACKLHKEAEMAKRI 484

Query: 370 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 429
           SEEIIKLDPLDAASYVLLSNIHASARNW NVS+IRKAMRDR+VRKEPGISWLELKNLVHQ
Sbjct: 485 SEEIIKLDPLDAASYVLLSNIHASARNWPNVSEIRKAMRDRNVRKEPGISWLELKNLVHQ 544

Query: 430 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIA 489
           FSMGDKSHPQYFEIDLYLKELMSELK+HGYVP+LGSVLHDMDNEEKEYNLAHHSEKFAIA
Sbjct: 545 FSMGDKSHPQYFEIDLYLKELMSELKRHGYVPDLGSVLHDMDNEEKEYNLAHHSEKFAIA 604

Query: 490 FALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 549
           FALMNTSENVPIRVMKNLRVC+DCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY
Sbjct: 605 FALMNTSENVPIRVMKNLRVCNDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNY 664

Query: 550 W 551
           W
Sbjct: 665 W 665

[Close]

BLAST of CsaV3_7G005780 vs. TrEMBL
Match: tr|A0A2P6RV04|A0A2P6RV04_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0131051 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 1.4e-223
Identity = 381/495 (76.97%), Postives = 436/495 (88.08%), Query Frame = 0


Query: 56  EFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVG 115
           E+N++ L LF EM+ LGF PDEFTLGSVLRGCAGLR L AG EVHA ++KCGFE + VVG
Sbjct: 149 EYNEEGLGLFSEMHELGFSPDEFTLGSVLRGCAGLRGLTAGCEVHAYVVKCGFEFNLVVG 208

Query: 116 SSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFR 175
           SSLAHMY+KSGSL DGEK+IKSMPIR VVAWNTLIAGKAQNG  E VL+QYNMMK+AGFR
Sbjct: 209 SSLAHMYMKSGSLVDGEKVIKSMPIRNVVAWNTLIAGKAQNGQSEGVLDQYNMMKIAGFR 268

Query: 176 PDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKA 235
           PDK+TFVSVLS+CSELATLGQGQQIHAE IKAGASSV+AV+S+LISMYSR GCLEDS+KA
Sbjct: 269 PDKVTFVSVLSSCSELATLGQGQQIHAEAIKAGASSVVAVISTLISMYSRCGCLEDSLKA 328

Query: 236 FVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLK 295
           F + E  DVVLWSS+I+AYGFHGRGEEA++LF QME   +EAN+VTFLSLLYACSH G+K
Sbjct: 329 FRECEGADVVLWSSVISAYGFHGRGEEAIKLFEQMEQEGLEANDVTFLSLLYACSHCGMK 388

Query: 296 EKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLA 355
           EKG + FDLMV+KY LKP++EHYTCVVDLLGR+G LEEAE MIRSMPV+ D IIWKTLL+
Sbjct: 389 EKGIKLFDLMVQKYGLKPKLEHYTCVVDLLGRSGFLEEAEAMIRSMPVKADAIIWKTLLS 448

Query: 356 ACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKE 415
           ACK+HK A+MA RI +++++ DP D+ASYVLLSNIHASAR W +VS++R AMRDR V+KE
Sbjct: 449 ACKIHKNADMARRIGQDVLRQDPEDSASYVLLSNIHASARRWQDVSEVRTAMRDRKVKKE 508

Query: 416 PGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEK 475
           PGISWLE+KN V+QF MGD  HPQY  IDLYLKEL SE+K HGYVP+ GSVLHDMDNEEK
Sbjct: 509 PGISWLEIKNKVYQFRMGDNCHPQYMAIDLYLKELRSEMKLHGYVPDTGSVLHDMDNEEK 568

Query: 476 EYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASR 535
           EY+LAHHSEK AIAFAL+NT E VP+RVMKNLRVC DCH AIK IS+I+NREIIVRDASR
Sbjct: 569 EYDLAHHSEKLAIAFALINTPEGVPVRVMKNLRVCIDCHVAIKYISQIKNREIIVRDASR 628

Query: 536 FHHFKDGECSCGNYW 551
           FHHFK G+CSCG+YW
Sbjct: 629 FHHFKHGKCSCGDYW 643

[Close]

BLAST of CsaV3_7G005780 vs. TrEMBL
Match: tr|A0A2I4EZF1|A0A2I4EZF1_9ROSI (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994137 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 2.1e-219
Identity = 375/480 (78.12%), Postives = 428/480 (89.17%), Query Frame = 0


Query: 71  LGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSD 130
           LGFLPDEFTLGSVLR CAGLR L AG ++HA ++KCGFE + VVGSSLAHMY+KSGSL  
Sbjct: 222 LGFLPDEFTLGSVLRSCAGLRCLHAGWQIHAYVVKCGFEFNLVVGSSLAHMYMKSGSLEG 281

Query: 131 GEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSE 190
           GEK+IK MPIR V+AWNTLIAGKAQNG PEEVL+QYNMMK+AGFRPDKITFVSVLS+CSE
Sbjct: 282 GEKVIKLMPIRNVIAWNTLIAGKAQNGYPEEVLDQYNMMKIAGFRPDKITFVSVLSSCSE 341

Query: 191 LATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSM 250
           LATLGQGQQIHAE IKAGA SV++VVSSLISMYSR GCLEDS+KAF++ E+ DVVLWSSM
Sbjct: 342 LATLGQGQQIHAEAIKAGACSVVSVVSSLISMYSRCGCLEDSLKAFLECEHTDVVLWSSM 401

Query: 251 IAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYK 310
           IAAYGFHGRG+EA+ELF  ME  ++EANEVTFLSLLYACSH GLKEKG E+FD MVKKY 
Sbjct: 402 IAAYGFHGRGDEAIELFEYMEQEEIEANEVTFLSLLYACSHCGLKEKGIEFFDKMVKKYA 461

Query: 311 LKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERIS 370
           ++PR+EHYTC+VDLLGR+G LEEAE MIRSMPV+ D IIWKTLL+ACK+HK+A+MA+RI+
Sbjct: 462 VEPRLEHYTCMVDLLGRSGCLEEAEAMIRSMPVKADVIIWKTLLSACKIHKKADMAKRIA 521

Query: 371 EEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQF 430
           EE+I+L P D+A YVLLSNIHASA+ W +VS++RKAMRDR V+KEPGISWLE+KN VHQF
Sbjct: 522 EEVIRLYPQDSAPYVLLSNIHASAKRWQDVSEVRKAMRDRMVKKEPGISWLEVKNAVHQF 581

Query: 431 SMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAF 490
            +GDK+HP+  EIDLYLKEL SE+K  GYVP+  +VLHDMDNEEKEYNLAHHSEK A+AF
Sbjct: 582 CIGDKTHPKSAEIDLYLKELTSEMKLRGYVPDTAAVLHDMDNEEKEYNLAHHSEKLAVAF 641

Query: 491 ALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 550
           ALMNT   VPIRVMKNLRVC DCH AIK IS IRNREIIVRDASRFHHFK+G+CSCG+YW
Sbjct: 642 ALMNTPAGVPIRVMKNLRVCSDCHVAIKYISEIRNREIIVRDASRFHHFKNGKCSCGDYW 701

The following BLAST results are available for this feature:

BLAST of CsaV3_7G005780 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43638.1	0.0e+00	100.00	hypothetical protein Csa_7G049200 [Cucumis sativus]	[more]
XP_016901687.1	5.9e-282	96.22	PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X2 [Cuc...	[more]
XP_004137032.1	1.4e-278	100.00	PREDICTED: pentatricopeptide repeat-containing protein At2g41080 [Cucumis sativu...	[more]
XP_008455289.1	5.0e-273	97.51	PREDICTED: pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Cuc...	[more]
XP_022147887.1	7.0e-267	80.57	pentatricopeptide repeat-containing protein At2g41080 isoform X2 [Momordica char...	[more]

BLAST of CsaV3_7G005780 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41080.1	1.0e-174	60.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G23330.1	3.7e-121	42.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G33170.1	7.0e-120	39.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49710.1	7.8e-119	44.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G13650.1	1.5e-117	41.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CsaV3_7G005780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S9M4\|PP198_ARATH	1.8e-173	60.56	Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LW63\|PP251_ARATH	6.7e-120	42.28	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
sp\|Q9SMZ2\|PP347_ARATH	1.3e-118	39.19	Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9M2Y7\|PP274_ARATH	1.4e-117	44.09	Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SVP7\|PP307_ARATH	2.6e-116	41.53	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_7G005780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2D8\|A0A0A0K2D8_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049200 PE=4 SV=1	[more]
tr\|A0A1S4E0C2\|A0A1S4E0C2_CUCME	3.9e-282	96.22	pentatricopeptide repeat-containing protein At2g41080 isoform X2 OS=Cucumis melo...	[more]
tr\|A0A1S3C1T8\|A0A1S3C1T8_CUCME	3.3e-273	97.51	pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo...	[more]
tr\|A0A2P6RV04\|A0A2P6RV04_ROSCH	1.4e-223	76.97	Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS...	[more]
tr\|A0A2I4EZF1\|A0A2I4EZF1_9ROSI	2.1e-219	78.13	pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Juglans regi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR032867	DYW_dom
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G005780.1	CsaV3_7G005780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 317..341 e-value: 0.0048 score: 17.0 coord: 217..236 e-value: 0.7 score: 10.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 245..278 e-value: 3.9E-5 score: 21.6 coord: 144..177 e-value: 0.0027 score: 15.8 coord: 318..341 e-value: 0.0014 score: 16.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 142..188 e-value: 7.1E-9 score: 35.6 coord: 243..290 e-value: 8.3E-9 score: 35.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..308 score: 7.695
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 380..414 score: 5.985
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 76..110 score: 6.478
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 111..141 score: 5.93
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 243..277 score: 10.852
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 142..176 score: 10.073
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 346..376 score: 5.579
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 177..211 score: 6.708
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 38..75 score: 5.218
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 314..344 score: 7.256
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 416..540 e-value: 3.9E-41 score: 139.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 214..436 e-value: 1.2E-35 score: 125.3 coord: 56..213 e-value: 9.6E-27 score: 96.1
None	No IPR available	PANTHER	PTHR24015:SF806	SUBFAMILY NOT NAMED	coord: 139..467
None	No IPR available	PANTHER	PTHR24015:SF806	SUBFAMILY NOT NAMED	coord: 59..137
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 139..467 coord: 59..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G005780	CSPI07G04860	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G005780	Cucsa.195690	Cucumber (Gy14) v1	cgycucB313
CsaV3_7G005780	CmaCh19G010050	Cucurbita maxima (Rimu)	cmacucB0643
CsaV3_7G005780	CmoCh19G010410	Cucurbita moschata (Rifu)	cmocucB0628
CsaV3_7G005780	CsGy7G004400	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G005780	Carg19249	Silver-seed gourd	carcucB0916
CsaV3_7G005780	Cla002240	Watermelon (97103) v1	cucwmB614
CsaV3_7G005780	MELO3C018714	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G005780	ClCG07G002590	Watermelon (Charleston Gray)	cucwcgB597
CsaV3_7G005780	Lsi11G017140	Bottle gourd (USVL1VR-Ls)	cuclsiB534
CsaV3_7G005780	MELO3C018714.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G005780	Cla97C07G130920	Watermelon (97103) v2	cucwmbB574
CsaV3_7G005780	Bhi05G001678	Wax gourd	cucwgoB690

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G005780	Cucumber (Chinese Long) v3	cuccucB059
CsaV3_7G005780	Silver-seed gourd	carcucB0758
CsaV3_7G005780	Cucumber (Gy14) v2	cgybcucB053
CsaV3_7G005780	Cucumber (Gy14) v1	cgycucB335
CsaV3_7G005780	Cucurbita maxima (Rimu)	cmacucB0172
CsaV3_7G005780	Cucurbita maxima (Rimu)	cmacucB0638
CsaV3_7G005780	Cucurbita maxima (Rimu)	cmacucB0686
CsaV3_7G005780	Cucurbita maxima (Rimu)	cmacucB0768
CsaV3_7G005780	Cucurbita moschata (Rifu)	cmocucB0155
CsaV3_7G005780	Cucurbita moschata (Rifu)	cmocucB0622
CsaV3_7G005780	Cucurbita pepo (Zucchini)	cpecucB0322
CsaV3_7G005780	Cucurbita pepo (Zucchini)	cpecucB0327
CsaV3_7G005780	Cucurbita pepo (Zucchini)	cpecucB0863
CsaV3_7G005780	Wild cucumber (PI 183967)	cpicucB063
CsaV3_7G005780	Bottle gourd (USVL1VR-Ls)	cuclsiB537
CsaV3_7G005780	Bottle gourd (USVL1VR-Ls)	cuclsiB542
CsaV3_7G005780	Melon (DHL92) v3.5.1	cucmeB536
CsaV3_7G005780	Melon (DHL92) v3.6.1	cucmedB524
CsaV3_7G005780	Watermelon (Charleston Gray)	cucwcgB562
CsaV3_7G005780	Watermelon (Charleston Gray)	cucwcgB582
CsaV3_7G005780	Watermelon (97103) v1	cucwmB611
CsaV3_7G005780	Watermelon (97103) v1	cucwmB624
CsaV3_7G005780	Watermelon (97103) v2	cucwmbB560