Carg19161 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGGTATCTTTTGGTTTCTCCTTTGCTTATGCTCAGATCCGATTAGATCTCTTCTGGGTTTCGTCTAATTTTGCCACTGGTTCCTTAATTTGGCGATTCGCTTTCTTAGATCTCGTTCTGGGTTTAGGTTGATTTTGTTCTGTTATGCTGATTTGCTTAAGGTTCTCTTTCTGCATATGGGTAATGATCTAATTGTTTATCTGATTATGTATGTGAACTTCTTCCTTGTAGATTGAAGTCAGCATGCCTTTCAATTACCCTTTTCTGGTTTTTGTGTAATCTGTTTACTTACTGTGGTTGGTTACTGTTTGTGCAGAATTGAGGAACACTACTTTTGGAGGTTAGTTTCACTTTCTTTCTCAAATGGGTATAATGTTTTTGCTTCATCATGACAAGTGATGCTGAACTTTGCAATATGAATATCAAAGATCTCAATATCTTAACCCTTTGATGATCATGAATTAGATTGTATTACCCTAAGAGGGCTATTTGCTGGTTTTCTCTTCATTTAAATTTCAGGAAAATATACTTGTTGAGGTAGGCTTTTGCTTCTTAGGTTTTCTTAGGATGTAAATAATGGTTCTGGAGTTGAAAGGTGAGACTGAGTGTTTGAAACAAAACTGCAAGATAAATGGACTAAGGAGCATGAAAGATCTAAAAATTGCCTTCTTAATATGTTTTATTGTCAAGATTCATAAGTGTCTCTGTGTGAGATTTCACATCAGTTGGAGAGGAGAACAACGCATTCCTTATAAGCATGTGAAAACCTTTCCCTAGCAGGCGCATTTTAAGACCGTGAGGCTGACGACGACAGGTAATGAGCCAACGCGGACATTATCTACTAGCGGTGGACTTAGGCTGTTACAAATGGTATTAGAGCTAGACACCGGGTGGTGTGCTTAGGCTGTTACAAATAGTATCAGAGCTAGACACCTTGCGGTGTGCTAGCGAGGACGCTAGGCCCCCAATGGGGTGGATTGTGTGATCCCACATCGGTTGGAGAGGAGAACAAAGTATTTCTTAGAAGGGTATGAAAAGCTCTCCCTAACAAACGCGTTTTAAAACCGTGAGGCTGACGGCGATATATATTGGATCAAGGCAGATAATAGCCCTTTGGATTTCTTTCCTCACATTCACATCCTACTCAAACTGACATTGCTGTCACCTTCCTTTCATTATGACAGGGAGGAGATATGTATTAGATATTTTATTCTTCACTTGACCGATAAACTTCGACTACTGGATCATAATAACTCGTGCATTTTGCAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQTA
BLAST of Carg19161 vs. NCBI nr
Match: XP_022952351.1 (uncharacterized protein LOC111455059 isoform X1 [Cucurbita moschata]) HSP 1 Score: 354.0 bits (907), Expect = 3.1e-94 Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0
BLAST of Carg19161 vs. NCBI nr
Match: XP_023554621.1 (uncharacterized protein LOC111811814 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350.5 bits (898), Expect = 3.5e-93 Identity = 183/193 (94.82%), Postives = 184/193 (95.34%), Query Frame = 0
BLAST of Carg19161 vs. NCBI nr
Match: XP_022969266.1 (uncharacterized protein LOC111468321 [Cucurbita maxima]) HSP 1 Score: 348.6 bits (893), Expect = 1.3e-92 Identity = 183/193 (94.82%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of Carg19161 vs. NCBI nr
Match: XP_022930738.1 (uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_022930739.1 uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata]) HSP 1 Score: 326.6 bits (836), Expect = 5.3e-86 Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of Carg19161 vs. NCBI nr
Match: XP_004144504.1 (PREDICTED: uncharacterized protein LOC101202853 isoform X1 [Cucumis sativus] >XP_011658696.1 PREDICTED: uncharacterized protein LOC101202853 isoform X2 [Cucumis sativus] >KGN43503.1 hypothetical protein Csa_7G041970 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 9.1e-86 Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0
BLAST of Carg19161 vs. TAIR10
Match: AT1G05070.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 184.5 bits (467), Expect = 5.9e-47 Identity = 99/181 (54.70%), Postives = 120/181 (66.30%), Query Frame = 0
BLAST of Carg19161 vs. TAIR10
Match: AT2G32580.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45 Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 0
BLAST of Carg19161 vs. TAIR10
Match: AT4G04360.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 167.5 bits (423), Expect = 7.5e-42 Identity = 91/164 (55.49%), Postives = 114/164 (69.51%), Query Frame = 0
BLAST of Carg19161 vs. TAIR10
Match: AT4G30996.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 141.4 bits (355), Expect = 5.8e-34 Identity = 77/163 (47.24%), Postives = 106/163 (65.03%), Query Frame = 0
BLAST of Carg19161 vs. TAIR10
Match: AT2G24290.1 (Protein of unknown function (DUF1068)) HSP 1 Score: 128.3 bits (321), Expect = 5.1e-30 Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 0
BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A0A0K245|A0A0A0K245_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 6.0e-86 Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0
BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A1S3C135|A0A1S3C135_CUCME (uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495614 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84 Identity = 165/193 (85.49%), Postives = 176/193 (91.19%), Query Frame = 0
BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A2I4GX55|A0A2I4GX55_9ROSI (uncharacterized protein LOC109011638 OS=Juglans regia OX=51240 GN=LOC109011638 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 5.5e-71 Identity = 138/177 (77.97%), Postives = 156/177 (88.14%), Query Frame = 0
BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A2P5B190|A0A2P5B190_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70 Identity = 144/187 (77.01%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A2P5EG56|A0A2P5EG56_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 3.0e-69 Identity = 143/188 (76.06%), Postives = 156/188 (82.98%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |