Carg19161-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19161-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mast/stem cell growth factor receptor Kit like
Location	Cucurbita_argyrosperma_scaffold_099 : 37514 .. 39337 (-)
Sequence length	558

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGGTATCTTTTGGTTTCTCCTTTGCTTATGCTCAGATCCGATTAGATCTCTTCTGGGTTTCGTCTAATTTTGCCACTGGTTCCTTAATTTGGCGATTCGCTTTCTTAGATCTCGTTCTGGGTTTAGGTTGATTTTGTTCTGTTATGCTGATTTGCTTAAGGTTCTCTTTCTGCATATGGGTAATGATCTAATTGTTTATCTGATTATGTATGTGAACTTCTTCCTTGTAGATTGAAGTCAGCATGCCTTTCAATTACCCTTTTCTGGTTTTTGTGTAATCTGTTTACTTACTGTGGTTGGTTACTGTTTGTGCAGAATTGAGGAACACTACTTTTGGAGGTTAGTTTCACTTTCTTTCTCAAATGGGTATAATGTTTTTGCTTCATCATGACAAGTGATGCTGAACTTTGCAATATGAATATCAAAGATCTCAATATCTTAACCCTTTGATGATCATGAATTAGATTGTATTACCCTAAGAGGGCTATTTGCTGGTTTTCTCTTCATTTAAATTTCAGGAAAATATACTTGTTGAGGTAGGCTTTTGCTTCTTAGGTTTTCTTAGGATGTAAATAATGGTTCTGGAGTTGAAAGGTGAGACTGAGTGTTTGAAACAAAACTGCAAGATAAATGGACTAAGGAGCATGAAAGATCTAAAAATTGCCTTCTTAATATGTTTTATTGTCAAGATTCATAAGTGTCTCTGTGTGAGATTTCACATCAGTTGGAGAGGAGAACAACGCATTCCTTATAAGCATGTGAAAACCTTTCCCTAGCAGGCGCATTTTAAGACCGTGAGGCTGACGACGACAGGTAATGAGCCAACGCGGACATTATCTACTAGCGGTGGACTTAGGCTGTTACAAATGGTATTAGAGCTAGACACCGGGTGGTGTGCTTAGGCTGTTACAAATAGTATCAGAGCTAGACACCTTGCGGTGTGCTAGCGAGGACGCTAGGCCCCCAATGGGGTGGATTGTGTGATCCCACATCGGTTGGAGAGGAGAACAAAGTATTTCTTAGAAGGGTATGAAAAGCTCTCCCTAACAAACGCGTTTTAAAACCGTGAGGCTGACGGCGATATATATTGGATCAAGGCAGATAATAGCCCTTTGGATTTCTTTCCTCACATTCACATCCTACTCAAACTGACATTGCTGTCACCTTCCTTTCATTATGACAGGGAGGAGATATGTATTAGATATTTTATTCTTCACTTGACCGATAAACTTCGACTACTGGATCATAATAACTCGTGCATTTTGCAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG

mRNA sequence

ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG

Coding sequence (CDS)

ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG

Protein sequence

MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQTA

Homology

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BLAST of Carg19161-RA vs. NCBI nr
Match: XP_022952351.1 (uncharacterized protein LOC111455059 isoform X1 [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 3.1e-94
Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC
Sbjct: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQPLITIPQ        DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA
Sbjct: 61  PSQPLITIPQELRNTTFGDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQPNIQTA
Sbjct: 181 KSRTQKQPNIQTA 193

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BLAST of Carg19161-RA vs. NCBI nr
Match: XP_023554621.1 (uncharacterized protein LOC111811814 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 3.5e-93
Identity = 183/193 (94.82%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC
Sbjct: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQPLITIPQ        DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA
Sbjct: 61  PSQPLITIPQELRNTTFGDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRAR+RGWKEGMA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARRRGWKEGMA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQPNI TA
Sbjct: 181 KSRTQKQPNIHTA 193

[Close]

BLAST of Carg19161-RA vs. NCBI nr
Match: XP_022969266.1 (uncharacterized protein LOC111468321 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 1.3e-92
Identity = 183/193 (94.82%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQASSCNPSLIKFGLALIALSIAGYIL PPLYWHFKEGLAVVTRSSSSSSCPPCFCDC
Sbjct: 1   MAIQASSCNPSLIKFGLALIALSIAGYILAPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQPLITIPQ        DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA
Sbjct: 61  PSQPLITIPQELRNTTFGDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQANIQTA 193

[Close]

BLAST of Carg19161-RA vs. NCBI nr
Match: XP_022930738.1 (uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_022930739.1 uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 5.3e-86
Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQA SC+PSLIK GLALIALSIAGYILGPPLYWH KEG AVV+RSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMT 120
           PSQP+I+IP+DC+KHDPEVSQDTEKNFADLLLEELKLKE EA E+ RRADMALLEAKKMT
Sbjct: 61  PSQPVISIPEDCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMT 120

Query: 121 SQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQP 180
           SQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTA WEQRARQRGWKEG AKSR QKQ 
Sbjct: 121 SQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQG 180

Query: 181 NIQTA 186
           NIQTA
Sbjct: 181 NIQTA 185

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BLAST of Carg19161-RA vs. NCBI nr
Match: XP_004144504.1 (PREDICTED: uncharacterized protein LOC101202853 isoform X1 [Cucumis sativus] >XP_011658696.1 PREDICTED: uncharacterized protein LOC101202853 isoform X2 [Cucumis sativus] >KGN43503.1 hypothetical protein Csa_7G041970 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 9.1e-86
Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQ SSCNPSLIK GLALIA++I GYILGPPLYWHFKEGLAVVT SSSSSSCPPCFCDC
Sbjct: 1   MAIQPSSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVTHSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PS P+I+IP+        DC+KHDPEVS+DTEKNFADLLLEELKLKE EALENQRRAD+A
Sbjct: 61  PSHPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTAMWEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTAMWEQRARQRGWKEGTA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

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BLAST of Carg19161-RA vs. TAIR10
Match: AT1G05070.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 184.5 bits (467), Expect = 5.9e-47
Identity = 99/181 (54.70%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 13  IKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQ-- 72
           +K GLAL+ LS+AGYILGPPLYWH  E LA V    S+SSCP C C+C +   +TIP+  
Sbjct: 8   LKIGLALLGLSMAGYILGPPLYWHLTEALAAV----SASSCPSCPCECSTYSAVTIPKEL 67

Query: 73  ------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQ 132
                 DC KHDPEV++DTEKN+A+LL EELKL+E E+LE  +RADM LLEAKK+TS YQ
Sbjct: 68  SNASFADCAKHDPEVNEDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQ 127

Query: 133 KEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQT 186
           KEADKCNSGMETCEEA                      RQ+GW+EG  K   + + N+Q 
Sbjct: 128 KEADKCNSGMETCEEAXXXXXXXXXXXXXXXXXXXXXXRQKGWREGSTKPNVKSKSNVQV 184

[Close]

BLAST of Carg19161-RA vs. TAIR10
Match: AT2G32580.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45
Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 0


Query: 13  IKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIP--- 72
           +K GLAL+ALS+ GYILGPPLYWH  E LAV     S++SC  C CDC S PL+TIP   
Sbjct: 8   LKVGLALLALSMIGYILGPPLYWHLTEALAV-----SATSCSACVCDCSSLPLLTIPTGL 67

Query: 73  -----QDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQ 132
                 DC K DPEV++DTEKN+A+LL EELK +E  ++E  +R D  LLEAKK+TS YQ
Sbjct: 68  SNGSFTDCAKRDPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQ 127

Query: 133 KEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQT 186
           KEADKCNSGMETCEEAR                 EQRARQ+G+K+G  KS  + +   + 
Sbjct: 128 KEADKCNSGMETCEEARXXXXXXXXXXXXXXXXXEQRARQKGYKDGATKSTVKSKSGTEV 183

[Close]

BLAST of Carg19161-RA vs. TAIR10
Match: AT4G04360.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 167.5 bits (423), Expect = 7.5e-42
Identity = 91/164 (55.49%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 19  LIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQ-------- 78
           ++ L I  YI GP LYWH  E +A     S  SSCPPC CDC SQPL++IP         
Sbjct: 15  VMGLCIVAYIAGPSLYWHLNETIA----DSLHSSCPPCVCDCSSQPLLSIPDGLSNHSFL 74

Query: 79  DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEADKC 138
           DC++H+ E S+++E +F +++ EELKL+E +A E++ RAD  LL+AKK  SQYQKEADKC
Sbjct: 75  DCMRHE-EGSEESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKC 134

Query: 139 NSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKS 175
           + GMETCE AREKAEA L  Q+RL+ MWE RARQ GWKEG   S
Sbjct: 135 SMGMETCELAREKAEAALDEQRRLSYMWELRARQGGWKEGTVAS 173

[Close]

BLAST of Carg19161-RA vs. TAIR10
Match: AT4G30996.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 141.4 bits (355), Expect = 5.8e-34
Identity = 77/163 (47.24%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 17  LALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQ------ 76
           L + A+  A  + GP LYW F +G    TR  ++S CPPC CDCP  P +++ Q      
Sbjct: 12  LVIFAVVSALVVCGPALYWKFNKGFVGSTR--ANSLCPPCVCDCP--PPLSLLQIAPGLA 71

Query: 77  -----DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQK 136
                DC   DPE+ Q+ EK F DLL EELKL+E  A E+ R  ++ L EAK++ SQYQK
Sbjct: 72  NLSITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQK 131

Query: 137 EADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWK 169
           EA+KCN+  E CE ARE+AEA+L  ++++T++WE+RARQ GW+
Sbjct: 132 EAEKCNAATEICESARERAEALLIKERKITSLWEKRARQSGWE 170

[Close]

BLAST of Carg19161-RA vs. TAIR10
Match: AT2G24290.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 128.3 bits (321), Expect = 5.1e-30
Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MA ++ +C   L+ F +    L     + GP LYW   +G  V +  S++S CPPC CD 
Sbjct: 1   MARRSGNCMRCLVIFSVVSALL-----VCGPALYWKLNKGF-VGSARSTNSICPPCVCDF 60

Query: 61  PSQPLITIPQ-----------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRA 120
           P  P +++ Q            C   DPE+ ++ EK F DLL EELKL+E  A E+ R  
Sbjct: 61  P--PPLSLLQIAPGLANLSITGCGSDDPELKEEMEKPFVDLLTEELKLQEAVADEHSRHM 120

Query: 121 DMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWK 169
           ++ L EAK++ SQYQKEA+KCN+  E CE ARE+A+A+L  ++++T +WE+RARQ GW+
Sbjct: 121 NVTLAEAKRVASQYQKEAEKCNAATEICESARERAQALLLKERKITFLWERRARQLGWE 171

[Close]

BLAST of Carg19161-RA vs. TrEMBL
Match: tr|A0A0A0K245|A0A0A0K245_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 6.0e-86
Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQ SSCNPSLIK GLALIA++I GYILGPPLYWHFKEGLAVVT SSSSSSCPPCFCDC
Sbjct: 1   MAIQPSSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVTHSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PS P+I+IP+        DC+KHDPEVS+DTEKNFADLLLEELKLKE EALENQRRAD+A
Sbjct: 61  PSHPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTAMWEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTAMWEQRARQRGWKEGTA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg19161-RA vs. TrEMBL
Match: tr|A0A1S3C135|A0A1S3C135_CUCME (uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495614 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 165/193 (85.49%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQ +SCNPSLIK GLALIA++I GYILGPPLYWHFKEGLAVV+ SS+SSSCPPCFCDC
Sbjct: 1   MAIQPTSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVSHSSASSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQP+I+IP+        DC+KHDPEVS+DTEKNFADLLLEELKLKE EALENQRRAD+A
Sbjct: 61  PSQPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTA WEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTATWEQRARQRGWKEGTA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg19161-RA vs. TrEMBL
Match: tr|A0A2I4GX55|A0A2I4GX55_9ROSI (uncharacterized protein LOC109011638 OS=Juglans regia OX=51240 GN=LOC109011638 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.5e-71
Identity = 138/177 (77.97%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 9   NPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITI 68
           NP+++K GLA++ L IAGYILGPPLYWHF EGLA V  S SS+SCPPC CDC SQPL++I
Sbjct: 5   NPTVLKVGLAVVGLCIAGYILGPPLYWHFMEGLAAV--SHSSNSCPPCQCDCSSQPLLSI 64

Query: 69  PQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEAD 128
           P+DC KHDPEVS+DTEKNFA+LL EELKL+E EALENQ+RADMALLEAKK+TSQYQKEAD
Sbjct: 65  PEDCAKHDPEVSEDTEKNFAELLTEELKLREAEALENQQRADMALLEAKKITSQYQKEAD 124

Query: 129 KCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQTA 186
           KC+SGMETCEEAREKAEA L AQK+LT MWE RARQRGWKEGMA S TQ Q N+QT+
Sbjct: 125 KCSSGMETCEEAREKAEATLVAQKKLTVMWELRARQRGWKEGMANSHTQNQGNVQTS 179

[Close]

BLAST of Carg19161-RA vs. TrEMBL
Match: tr|A0A2P5B190|A0A2P5B190_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 144/187 (77.01%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 5   ASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQP 64
           A +C+P ++K GL +IAL IAGYILGPPLYWHF EGLA V  S SSSSCPPC CDC SQP
Sbjct: 8   AGACSPVVLKTGLTVIALCIAGYILGPPLYWHFMEGLAAV--SHSSSSCPPCVCDCSSQP 67

Query: 65  LITIP--------QDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEA 124
           L++IP         DC K DPEVS+DTEKNFADLL EELKL+E EALE+QRRADMALLEA
Sbjct: 68  LLSIPIGLSNTSFTDCAKRDPEVSEDTEKNFADLLAEELKLREAEALEHQRRADMALLEA 127

Query: 125 KKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRT 184
           KK+TSQYQKEADKC SGMETCEEAREKAEA LAAQK+LTAMWEQRARQRGWKEGMAKSR 
Sbjct: 128 KKVTSQYQKEADKCTSGMETCEEAREKAEAALAAQKKLTAMWEQRARQRGWKEGMAKSRA 187

[Close]

BLAST of Carg19161-RA vs. TrEMBL
Match: tr|A0A2P5EG56|A0A2P5EG56_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.0e-69
Identity = 143/188 (76.06%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 5   ASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQP 64
           A +C+P ++K GL +IAL IAGYILGPPLYWHF EGLA V  S SSSSCP C CDC SQP
Sbjct: 8   AGACSPVVLKTGLTVIALCIAGYILGPPLYWHFMEGLAAV--SHSSSSCPTCVCDCSSQP 67

Query: 65  LITIP--------QDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEA 124
           L++IP         DC K DPEVS+DTEKNFADLL EELKL+E EALE+QRRADMALLEA
Sbjct: 68  LLSIPIGLSNTSLTDCAKRDPEVSEDTEKNFADLLAEELKLREAEALEHQRRADMALLEA 127

Query: 125 KKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRT 184
           KK+TSQYQKEADKC SGMETCEEAREKAEA LAAQK+LTA WEQRARQRGWKEGMAKSR 
Sbjct: 128 KKVTSQYQKEADKCTSGMETCEEAREKAEAALAAQKKLTATWEQRARQRGWKEGMAKSRA 187

The following BLAST results are available for this feature:

BLAST of Carg19161-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952351.1	3.1e-94	95.85	uncharacterized protein LOC111455059 isoform X1 [Cucurbita moschata]	[more]
XP_023554621.1	3.5e-93	94.82	uncharacterized protein LOC111811814 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022969266.1	1.3e-92	94.82	uncharacterized protein LOC111468321 [Cucurbita maxima]	[more]
XP_022930738.1	5.3e-86	90.27	uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_0229307...	[more]
XP_004144504.1	9.1e-86	87.05	PREDICTED: uncharacterized protein LOC101202853 isoform X1 [Cucumis sativus] >XP...	[more]

BLAST of Carg19161-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05070.1	5.9e-47	54.70	Protein of unknown function (DUF1068)	[more]
AT2G32580.1	5.6e-45	54.14	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	7.5e-42	55.49	Protein of unknown function (DUF1068)	[more]
AT4G30996.1	5.8e-34	47.24	Protein of unknown function (DUF1068)	[more]
AT2G24290.1	5.1e-30	41.90	Protein of unknown function (DUF1068)	[more]

BLAST of Carg19161-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19161-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K245\|A0A0A0K245_CUCSA	6.0e-86	87.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1	[more]
tr\|A0A1S3C135\|A0A1S3C135_CUCME	1.1e-84	85.49	uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4GX55\|A0A2I4GX55_9ROSI	5.5e-71	77.97	uncharacterized protein LOC109011638 OS=Juglans regia OX=51240 GN=LOC109011638 P...	[more]
tr\|A0A2P5B190\|A0A2P5B190_PARAD	2.7e-70	77.01	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE...	[more]
tr\|A0A2P5EG56\|A0A2P5EG56_9ROSA	3.0e-69	76.06	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19161	Carg19161	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19161-RA.CDS.2	Carg19161-RA.CDS.2	CDS
Carg19161-RA.CDS.1	Carg19161-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19161-RA.exon.2	Carg19161-RA.exon.2	exon
Carg19161-RA.exon.1	Carg19161-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19161-RA	Carg19161-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..185
None	No IPR available	PANTHER	PTHR32254:SF11	EXPRESSED PROTEIN	coord: 12..182
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 12..182
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 12..170 e-value: 1.9E-76 score: 255.5