Carg19161 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19161
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mast/stem cell growth factor receptor Kit like
Location	Cucurbita_argyrosperma_scaffold_099 : 37514 .. 39337 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGGTATCTTTTGGTTTCTCCTTTGCTTATGCTCAGATCCGATTAGATCTCTTCTGGGTTTCGTCTAATTTTGCCACTGGTTCCTTAATTTGGCGATTCGCTTTCTTAGATCTCGTTCTGGGTTTAGGTTGATTTTGTTCTGTTATGCTGATTTGCTTAAGGTTCTCTTTCTGCATATGGGTAATGATCTAATTGTTTATCTGATTATGTATGTGAACTTCTTCCTTGTAGATTGAAGTCAGCATGCCTTTCAATTACCCTTTTCTGGTTTTTGTGTAATCTGTTTACTTACTGTGGTTGGTTACTGTTTGTGCAGAATTGAGGAACACTACTTTTGGAGGTTAGTTTCACTTTCTTTCTCAAATGGGTATAATGTTTTTGCTTCATCATGACAAGTGATGCTGAACTTTGCAATATGAATATCAAAGATCTCAATATCTTAACCCTTTGATGATCATGAATTAGATTGTATTACCCTAAGAGGGCTATTTGCTGGTTTTCTCTTCATTTAAATTTCAGGAAAATATACTTGTTGAGGTAGGCTTTTGCTTCTTAGGTTTTCTTAGGATGTAAATAATGGTTCTGGAGTTGAAAGGTGAGACTGAGTGTTTGAAACAAAACTGCAAGATAAATGGACTAAGGAGCATGAAAGATCTAAAAATTGCCTTCTTAATATGTTTTATTGTCAAGATTCATAAGTGTCTCTGTGTGAGATTTCACATCAGTTGGAGAGGAGAACAACGCATTCCTTATAAGCATGTGAAAACCTTTCCCTAGCAGGCGCATTTTAAGACCGTGAGGCTGACGACGACAGGTAATGAGCCAACGCGGACATTATCTACTAGCGGTGGACTTAGGCTGTTACAAATGGTATTAGAGCTAGACACCGGGTGGTGTGCTTAGGCTGTTACAAATAGTATCAGAGCTAGACACCTTGCGGTGTGCTAGCGAGGACGCTAGGCCCCCAATGGGGTGGATTGTGTGATCCCACATCGGTTGGAGAGGAGAACAAAGTATTTCTTAGAAGGGTATGAAAAGCTCTCCCTAACAAACGCGTTTTAAAACCGTGAGGCTGACGGCGATATATATTGGATCAAGGCAGATAATAGCCCTTTGGATTTCTTTCCTCACATTCACATCCTACTCAAACTGACATTGCTGTCACCTTCCTTTCATTATGACAGGGAGGAGATATGTATTAGATATTTTATTCTTCACTTGACCGATAAACTTCGACTACTGGATCATAATAACTCGTGCATTTTGCAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG

mRNA sequence

ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG

Coding sequence (CDS)

ATGGCAATTCAGGCCAGCTCCTGCAATCCCTCACTCATCAAGTTCGGATTGGCTTTGATCGCCCTCTCTATTGCCGGTTACATTCTCGGTCCTCCTCTCTATTGGCACTTCAAGGAAGGTTTAGCCGTCGTTACCCGCTCCTCTTCTTCTTCCTCATGCCCTCCTTGTTTCTGCGACTGCCCTTCTCAGCCCCTCATCACAATTCCCCAAGATTGTATTAAGCACGATCCAGAAGTGAGTCAAGACACAGAAAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGCTAAAGGAAACCGAAGCTTTGGAAAATCAGCGCCGTGCTGATATGGCTCTGCTCGAGGCAAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCTAGAGAGAAAGCTGAAGCAGTATTAGCTGCACAGAAGAGATTAACAGCAATGTGGGAGCAAAGGGCTCGCCAAAGGGGTTGGAAAGAAGGCATGGCTAAGTCTCGTACTCAAAAACAACCAAATATTCAAACTGCATAG

Protein sequence

MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQTA

Homology

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BLAST of Carg19161 vs. NCBI nr
Match: XP_022952351.1 (uncharacterized protein LOC111455059 isoform X1 [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 3.1e-94
Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC
Sbjct: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQPLITIPQ        DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA
Sbjct: 61  PSQPLITIPQELRNTTFGDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQPNIQTA
Sbjct: 181 KSRTQKQPNIQTA 193

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BLAST of Carg19161 vs. NCBI nr
Match: XP_023554621.1 (uncharacterized protein LOC111811814 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 3.5e-93
Identity = 183/193 (94.82%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC
Sbjct: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQPLITIPQ        DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA
Sbjct: 61  PSQPLITIPQELRNTTFGDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRAR+RGWKEGMA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARRRGWKEGMA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQPNI TA
Sbjct: 181 KSRTQKQPNIHTA 193

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BLAST of Carg19161 vs. NCBI nr
Match: XP_022969266.1 (uncharacterized protein LOC111468321 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 1.3e-92
Identity = 183/193 (94.82%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQASSCNPSLIKFGLALIALSIAGYIL PPLYWHFKEGLAVVTRSSSSSSCPPCFCDC
Sbjct: 1   MAIQASSCNPSLIKFGLALIALSIAGYILAPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQPLITIPQ        DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA
Sbjct: 61  PSQPLITIPQELRNTTFGDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQANIQTA 193

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BLAST of Carg19161 vs. NCBI nr
Match: XP_022930738.1 (uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_022930739.1 uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 5.3e-86
Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQA SC+PSLIK GLALIALSIAGYILGPPLYWH KEG AVV+RSSSSSSCPPCFCDC
Sbjct: 1   MAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMT 120
           PSQP+I+IP+DC+KHDPEVSQDTEKNFADLLLEELKLKE EA E+ RRADMALLEAKKMT
Sbjct: 61  PSQPVISIPEDCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMT 120

Query: 121 SQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQP 180
           SQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTA WEQRARQRGWKEG AKSR QKQ 
Sbjct: 121 SQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQG 180

Query: 181 NIQTA 186
           NIQTA
Sbjct: 181 NIQTA 185

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BLAST of Carg19161 vs. NCBI nr
Match: XP_004144504.1 (PREDICTED: uncharacterized protein LOC101202853 isoform X1 [Cucumis sativus] >XP_011658696.1 PREDICTED: uncharacterized protein LOC101202853 isoform X2 [Cucumis sativus] >KGN43503.1 hypothetical protein Csa_7G041970 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 9.1e-86
Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQ SSCNPSLIK GLALIA++I GYILGPPLYWHFKEGLAVVT SSSSSSCPPCFCDC
Sbjct: 1   MAIQPSSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVTHSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PS P+I+IP+        DC+KHDPEVS+DTEKNFADLLLEELKLKE EALENQRRAD+A
Sbjct: 61  PSHPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTAMWEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTAMWEQRARQRGWKEGTA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

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BLAST of Carg19161 vs. TAIR10
Match: AT1G05070.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 184.5 bits (467), Expect = 5.9e-47
Identity = 99/181 (54.70%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 13  IKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQ-- 72
           +K GLAL+ LS+AGYILGPPLYWH  E LA V    S+SSCP C C+C +   +TIP+  
Sbjct: 8   LKIGLALLGLSMAGYILGPPLYWHLTEALAAV----SASSCPSCPCECSTYSAVTIPKEL 67

Query: 73  ------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQ 132
                 DC KHDPEV++DTEKN+A+LL EELKL+E E+LE  +RADM LLEAKK+TS YQ
Sbjct: 68  SNASFADCAKHDPEVNEDTEKNYAELLTEELKLREAESLEKHKRADMGLLEAKKVTSSYQ 127

Query: 133 KEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQT 186
           KEADKCNSGMETCEEA                      RQ+GW+EG  K   + + N+Q 
Sbjct: 128 KEADKCNSGMETCEEAXXXXXXXXXXXXXXXXXXXXXXRQKGWREGSTKPNVKSKSNVQV 184

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BLAST of Carg19161 vs. TAIR10
Match: AT2G32580.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45
Identity = 98/181 (54.14%), Postives = 119/181 (65.75%), Query Frame = 0


Query: 13  IKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIP--- 72
           +K GLAL+ALS+ GYILGPPLYWH  E LAV     S++SC  C CDC S PL+TIP   
Sbjct: 8   LKVGLALLALSMIGYILGPPLYWHLTEALAV-----SATSCSACVCDCSSLPLLTIPTGL 67

Query: 73  -----QDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQ 132
                 DC K DPEV++DTEKN+A+LL EELK +E  ++E  +R D  LLEAKK+TS YQ
Sbjct: 68  SNGSFTDCAKRDPEVNEDTEKNYAELLTEELKQREAASMEKHKRVDTGLLEAKKITSSYQ 127

Query: 133 KEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQT 186
           KEADKCNSGMETCEEAR                 EQRARQ+G+K+G  KS  + +   + 
Sbjct: 128 KEADKCNSGMETCEEARXXXXXXXXXXXXXXXXXEQRARQKGYKDGATKSTVKSKSGTEV 183

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BLAST of Carg19161 vs. TAIR10
Match: AT4G04360.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 167.5 bits (423), Expect = 7.5e-42
Identity = 91/164 (55.49%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 19  LIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQ-------- 78
           ++ L I  YI GP LYWH  E +A     S  SSCPPC CDC SQPL++IP         
Sbjct: 15  VMGLCIVAYIAGPSLYWHLNETIA----DSLHSSCPPCVCDCSSQPLLSIPDGLSNHSFL 74

Query: 79  DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEADKC 138
           DC++H+ E S+++E +F +++ EELKL+E +A E++ RAD  LL+AKK  SQYQKEADKC
Sbjct: 75  DCMRHE-EGSEESESSFTEMVAEELKLREAQAQEDEWRADRLLLDAKKAASQYQKEADKC 134

Query: 139 NSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKS 175
           + GMETCE AREKAEA L  Q+RL+ MWE RARQ GWKEG   S
Sbjct: 135 SMGMETCELAREKAEAALDEQRRLSYMWELRARQGGWKEGTVAS 173

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BLAST of Carg19161 vs. TAIR10
Match: AT4G30996.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 141.4 bits (355), Expect = 5.8e-34
Identity = 77/163 (47.24%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 17  LALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITIPQ------ 76
           L + A+  A  + GP LYW F +G    TR  ++S CPPC CDCP  P +++ Q      
Sbjct: 12  LVIFAVVSALVVCGPALYWKFNKGFVGSTR--ANSLCPPCVCDCP--PPLSLLQIAPGLA 71

Query: 77  -----DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQK 136
                DC   DPE+ Q+ EK F DLL EELKL+E  A E+ R  ++ L EAK++ SQYQK
Sbjct: 72  NLSITDCGSDDPELKQEMEKQFVDLLTEELKLQEAVADEHSRHMNVTLAEAKRVASQYQK 131

Query: 137 EADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWK 169
           EA+KCN+  E CE ARE+AEA+L  ++++T++WE+RARQ GW+
Sbjct: 132 EAEKCNAATEICESARERAEALLIKERKITSLWEKRARQSGWE 170

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BLAST of Carg19161 vs. TAIR10
Match: AT2G24290.1 (Protein of unknown function (DUF1068))

HSP 1 Score: 128.3 bits (321), Expect = 5.1e-30
Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MA ++ +C   L+ F +    L     + GP LYW   +G  V +  S++S CPPC CD 
Sbjct: 1   MARRSGNCMRCLVIFSVVSALL-----VCGPALYWKLNKGF-VGSARSTNSICPPCVCDF 60

Query: 61  PSQPLITIPQ-----------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRA 120
           P  P +++ Q            C   DPE+ ++ EK F DLL EELKL+E  A E+ R  
Sbjct: 61  P--PPLSLLQIAPGLANLSITGCGSDDPELKEEMEKPFVDLLTEELKLQEAVADEHSRHM 120

Query: 121 DMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWK 169
           ++ L EAK++ SQYQKEA+KCN+  E CE ARE+A+A+L  ++++T +WE+RARQ GW+
Sbjct: 121 NVTLAEAKRVASQYQKEAEKCNAATEICESARERAQALLLKERKITFLWERRARQLGWE 171

[Close]

BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A0A0K245|A0A0A0K245_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 6.0e-86
Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQ SSCNPSLIK GLALIA++I GYILGPPLYWHFKEGLAVVT SSSSSSCPPCFCDC
Sbjct: 1   MAIQPSSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVTHSSSSSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PS P+I+IP+        DC+KHDPEVS+DTEKNFADLLLEELKLKE EALENQRRAD+A
Sbjct: 61  PSHPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTAMWEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTAMWEQRARQRGWKEGTA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A1S3C135|A0A1S3C135_CUCME (uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495614 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 165/193 (85.49%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MAIQASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDC 60
           MAIQ +SCNPSLIK GLALIA++I GYILGPPLYWHFKEGLAVV+ SS+SSSCPPCFCDC
Sbjct: 1   MAIQPTSCNPSLIKLGLALIAITIVGYILGPPLYWHFKEGLAVVSHSSASSSCPPCFCDC 60

Query: 61  PSQPLITIPQ--------DCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMA 120
           PSQP+I+IP+        DC+KHDPEVS+DTEKNFADLLLEELKLKE EALENQRRAD+A
Sbjct: 61  PSQPVISIPEELRNSTFADCVKHDPEVSRDTEKNFADLLLEELKLKEAEALENQRRADVA 120

Query: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMA 180
           LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVL AQKRLTA WEQRARQRGWKEG A
Sbjct: 121 LLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLTAQKRLTATWEQRARQRGWKEGTA 180

Query: 181 KSRTQKQPNIQTA 186
           KSRTQKQ NIQTA
Sbjct: 181 KSRTQKQGNIQTA 193

[Close]

BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A2I4GX55|A0A2I4GX55_9ROSI (uncharacterized protein LOC109011638 OS=Juglans regia OX=51240 GN=LOC109011638 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.5e-71
Identity = 138/177 (77.97%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 9   NPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQPLITI 68
           NP+++K GLA++ L IAGYILGPPLYWHF EGLA V  S SS+SCPPC CDC SQPL++I
Sbjct: 5   NPTVLKVGLAVVGLCIAGYILGPPLYWHFMEGLAAV--SHSSNSCPPCQCDCSSQPLLSI 64

Query: 69  PQDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEAKKMTSQYQKEAD 128
           P+DC KHDPEVS+DTEKNFA+LL EELKL+E EALENQ+RADMALLEAKK+TSQYQKEAD
Sbjct: 65  PEDCAKHDPEVSEDTEKNFAELLTEELKLREAEALENQQRADMALLEAKKITSQYQKEAD 124

Query: 129 KCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRTQKQPNIQTA 186
           KC+SGMETCEEAREKAEA L AQK+LT MWE RARQRGWKEGMA S TQ Q N+QT+
Sbjct: 125 KCSSGMETCEEAREKAEATLVAQKKLTVMWELRARQRGWKEGMANSHTQNQGNVQTS 179

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BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A2P5B190|A0A2P5B190_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 144/187 (77.01%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 5   ASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQP 64
           A +C+P ++K GL +IAL IAGYILGPPLYWHF EGLA V  S SSSSCPPC CDC SQP
Sbjct: 8   AGACSPVVLKTGLTVIALCIAGYILGPPLYWHFMEGLAAV--SHSSSSCPPCVCDCSSQP 67

Query: 65  LITIP--------QDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEA 124
           L++IP         DC K DPEVS+DTEKNFADLL EELKL+E EALE+QRRADMALLEA
Sbjct: 68  LLSIPIGLSNTSFTDCAKRDPEVSEDTEKNFADLLAEELKLREAEALEHQRRADMALLEA 127

Query: 125 KKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRT 184
           KK+TSQYQKEADKC SGMETCEEAREKAEA LAAQK+LTAMWEQRARQRGWKEGMAKSR 
Sbjct: 128 KKVTSQYQKEADKCTSGMETCEEAREKAEAALAAQKKLTAMWEQRARQRGWKEGMAKSRA 187

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BLAST of Carg19161 vs. TrEMBL
Match: tr|A0A2P5EG56|A0A2P5EG56_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.0e-69
Identity = 143/188 (76.06%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 5   ASSCNPSLIKFGLALIALSIAGYILGPPLYWHFKEGLAVVTRSSSSSSCPPCFCDCPSQP 64
           A +C+P ++K GL +IAL IAGYILGPPLYWHF EGLA V  S SSSSCP C CDC SQP
Sbjct: 8   AGACSPVVLKTGLTVIALCIAGYILGPPLYWHFMEGLAAV--SHSSSSCPTCVCDCSSQP 67

Query: 65  LITIP--------QDCIKHDPEVSQDTEKNFADLLLEELKLKETEALENQRRADMALLEA 124
           L++IP         DC K DPEVS+DTEKNFADLL EELKL+E EALE+QRRADMALLEA
Sbjct: 68  LLSIPIGLSNTSLTDCAKRDPEVSEDTEKNFADLLAEELKLREAEALEHQRRADMALLEA 127

Query: 125 KKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTAMWEQRARQRGWKEGMAKSRT 184
           KK+TSQYQKEADKC SGMETCEEAREKAEA LAAQK+LTA WEQRARQRGWKEGMAKSR 
Sbjct: 128 KKVTSQYQKEADKCTSGMETCEEAREKAEAALAAQKKLTATWEQRARQRGWKEGMAKSRA 187

The following BLAST results are available for this feature:

BLAST of Carg19161 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952351.1	3.1e-94	95.85	uncharacterized protein LOC111455059 isoform X1 [Cucurbita moschata]	[more]
XP_023554621.1	3.5e-93	94.82	uncharacterized protein LOC111811814 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022969266.1	1.3e-92	94.82	uncharacterized protein LOC111468321 [Cucurbita maxima]	[more]
XP_022930738.1	5.3e-86	90.27	uncharacterized protein LOC111437126 isoform X2 [Cucurbita moschata] >XP_0229307...	[more]
XP_004144504.1	9.1e-86	87.05	PREDICTED: uncharacterized protein LOC101202853 isoform X1 [Cucumis sativus] >XP...	[more]

BLAST of Carg19161 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05070.1	5.9e-47	54.70	Protein of unknown function (DUF1068)	[more]
AT2G32580.1	5.6e-45	54.14	Protein of unknown function (DUF1068)	[more]
AT4G04360.1	7.5e-42	55.49	Protein of unknown function (DUF1068)	[more]
AT4G30996.1	5.8e-34	47.24	Protein of unknown function (DUF1068)	[more]
AT2G24290.1	5.1e-30	41.90	Protein of unknown function (DUF1068)	[more]

BLAST of Carg19161 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19161 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K245\|A0A0A0K245_CUCSA	6.0e-86	87.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041970 PE=4 SV=1	[more]
tr\|A0A1S3C135\|A0A1S3C135_CUCME	1.1e-84	85.49	uncharacterized protein LOC103495614 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4GX55\|A0A2I4GX55_9ROSI	5.5e-71	77.97	uncharacterized protein LOC109011638 OS=Juglans regia OX=51240 GN=LOC109011638 P...	[more]
tr\|A0A2P5B190\|A0A2P5B190_PARAD	2.7e-70	77.01	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_280910 PE...	[more]
tr\|A0A2P5EG56\|A0A2P5EG56_9ROSA	3.0e-69	76.06	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_197300 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010471	DUF1068

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19161-RA	Carg19161-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..185
None	No IPR available	PANTHER	PTHR32254:SF11	EXPRESSED PROTEIN	coord: 12..182
None	No IPR available	PANTHER	PTHR32254	FAMILY NOT NAMED	coord: 12..182
IPR010471	Protein of unknown function DUF1068	PFAM	PF06364	DUF1068	coord: 12..170 e-value: 1.9E-76 score: 255.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19161	Cla010443	Watermelon (97103) v1	carwmB0881
Carg19161	Cla007651	Watermelon (97103) v1	carwmB0880
Carg19161	Csa2G416150	Cucumber (Chinese Long) v2	carcuB0889
Carg19161	Csa7G041970	Cucumber (Chinese Long) v2	carcuB0891
Carg19161	MELO3C018832	Melon (DHL92) v3.5.1	carmeB0865
Carg19161	MELO3C019299	Melon (DHL92) v3.5.1	carmeB0863
Carg19161	ClCG02G009050	Watermelon (Charleston Gray)	carwcgB0852
Carg19161	ClCG02G002080	Watermelon (Charleston Gray)	carwcgB0851
Carg19161	CSPI02G26190	Wild cucumber (PI 183967)	carcpiB0909
Carg19161	CSPI07G03530	Wild cucumber (PI 183967)	carcpiB0911
Carg19161	Cucsa.148710	Cucumber (Gy14) v1	carcgyB0997
Carg19161	CmaCh19G009090	Cucurbita maxima (Rimu)	carcmaB1214
Carg19161	CmaCh02G001800	Cucurbita maxima (Rimu)	carcmaB1216
Carg19161	CmaCh11G018110	Cucurbita maxima (Rimu)	carcmaB1211
Carg19161	CmoCh02G001860	Cucurbita moschata (Rifu)	carcmoB1185
Carg19161	CmoCh19G009350	Cucurbita moschata (Rifu)	carcmoB1183
Carg19161	CmoCh11G018860	Cucurbita moschata (Rifu)	carcmoB1179
Carg19161	Lsi10G001050	Bottle gourd (USVL1VR-Ls)	carlsiB793
Carg19161	Lsi11G014320	Bottle gourd (USVL1VR-Ls)	carlsiB795
Carg19161	Cp4.1LG05g14330	Cucurbita pepo (Zucchini)	carcpeB1225
Carg19161	Cp4.1LG04g03570	Cucurbita pepo (Zucchini)	carcpeB1223
Carg19161	Cp4.1LG15g07410	Cucurbita pepo (Zucchini)	carcpeB1220
Carg19161	CsGy7G003190	Cucumber (Gy14) v2	carcgybB0864
Carg19161	MELO3C018832.2	Melon (DHL92) v3.6.1	carmedB0874
Carg19161	CsaV3_2G034690	Cucumber (Chinese Long) v3	carcucB0913
Carg19161	CsaV3_7G003420	Cucumber (Chinese Long) v3	carcucB0915
Carg19161	Cla97C02G028480	Watermelon (97103) v2	carwmbB0915
Carg19161	Cla97C02G035480	Watermelon (97103) v2	carwmbB0916
Carg19161	Bhi05G001196	Wax gourd	carwgoB1022
Carg19161	Bhi10G001089	Wax gourd	carwgoB1024

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19161	Carg13518	Silver-seed gourd	carcarB036

The following block(s) are covering this gene:

None