Carg19753 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGAAGGAAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGACGCAGCCATTGATTTAGCTCAGGAGCTGGTATTTCTTTGAAAATCTCTCTCTTTCATCCATTTTCAAAAGCTTCTTGATGTTTTTCTCTTCCCCTCTCTCTCTTCCGTTCTTTATATGCATATATATTACACTGTATTTTCTCTGTGAAGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATCGTGGTGGAGGGAGAGTCATGGGGTAAGTGATCCAAAGCACTTTTGTGAGATCCCACATCAGTTGGAGAGAAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTAACAACGCATTTTAAACTTCTATTATGTACATGTTTGAGGTTTCAAAGCATGCTTTGGTTTTGTTCATTTGCAGGATCATTCCTAGGACACTAATGAACAAAGAGGTCAGAAGCATATCAATACCGTAATTTGTTGAATTTTCTTTTGGCTTAATCAAAGTTGTAGCTAAAACTTAACTTGATTCTTCCTCTCTAAAAAAACGATCATTTCTTGGGGGGGAAAACTACAGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTTCCATCAACCCCTTTAACCTTTCCTATTCAGAAACACAATCCCACAATTCTTTTTTTCTTTTATCCTTATTGCACTGATTTTCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGATAAACCAGTAAACTCAAAAAAAACAGATTACCACAAGTTTCATTTCGATCTCCCCTTTAAGTTCCTTCAGCAAATTCTCATTCTCAGGTTGGCTTGCTGA ATGGAAGGGAAGGAAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGACGCAGCCATTGATTTAGCTCAGGAGCTGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATCGTGGTGGAGGGAGAGTCATGGGGATCATTCCTAGGACACTAATGAACAAAGAGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGATAAACCAGTAAACTCAAAAAAAACAGATTACCACAAGTTTCATTTCGATCTCCCCTTTAAGTTCCTTCAGCAAATTCTCATTCTCAGGTTGGCTTGCTGA ATGGAAGGGAAGGAAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGACGCAGCCATTGATTTAGCTCAGGAGCTGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATCGTGGTGGAGGGAGAGTCATGGGGATCATTCCTAGGACACTAATGAACAAAGAGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGATAAACCAGTAAACTCAAAAAAAACAGATTACCACAAGTTTCATTTCGATCTCCCCTTTAAGTTCCTTCAGCAAATTCTCATTCTCAGGTTGGCTTGCTGA MEGKEVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLVSQAVHRGGGRVMGIIPRTLMNKEITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEVITWAQLGIHDKPVNSKKTDYHKFHFDLPFKFLQQILILRLAC
BLAST of Carg19753 vs. NCBI nr
Match: XP_023532490.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281.6 bits (719), Expect = 1.8e-72 Identity = 138/145 (95.17%), Postives = 138/145 (95.17%), Query Frame = 0
BLAST of Carg19753 vs. NCBI nr
Match: XP_022971081.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita maxima]) HSP 1 Score: 280.8 bits (717), Expect = 3.0e-72 Identity = 137/145 (94.48%), Postives = 139/145 (95.86%), Query Frame = 0
BLAST of Carg19753 vs. NCBI nr
Match: XP_022947702.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita moschata]) HSP 1 Score: 280.0 bits (715), Expect = 5.2e-72 Identity = 137/145 (94.48%), Postives = 138/145 (95.17%), Query Frame = 0
BLAST of Carg19753 vs. NCBI nr
Match: XP_022943354.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita moschata]) HSP 1 Score: 277.3 bits (708), Expect = 3.4e-71 Identity = 135/145 (93.10%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of Carg19753 vs. NCBI nr
Match: XP_023512086.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.3 bits (708), Expect = 3.4e-71 Identity = 135/145 (93.10%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of Carg19753 vs. TAIR10
Match: AT4G35190.1 (Putative lysine decarboxylase family protein) HSP 1 Score: 238.4 bits (607), Expect = 3.1e-63 Identity = 115/140 (82.14%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Carg19753 vs. TAIR10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein) HSP 1 Score: 221.1 bits (562), Expect = 5.2e-58 Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 0
BLAST of Carg19753 vs. TAIR10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein) HSP 1 Score: 219.2 bits (557), Expect = 2.0e-57 Identity = 102/142 (71.83%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Carg19753 vs. TAIR10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein) HSP 1 Score: 218.0 bits (554), Expect = 4.4e-57 Identity = 101/135 (74.81%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of Carg19753 vs. TAIR10
Match: AT2G37210.2 (lysine decarboxylase family protein) HSP 1 Score: 208.4 bits (529), Expect = 3.5e-54 Identity = 104/163 (63.80%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of Carg19753 vs. Swiss-Prot
Match: sp|Q8LBB7|LOG5_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana OX=3702 GN=LOG5 PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 5.7e-62 Identity = 115/140 (82.14%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Carg19753 vs. Swiss-Prot
Match: sp|Q8L8B8|LOG3_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-57 Identity = 105/139 (75.54%), Postives = 121/139 (87.05%), Query Frame = 0
BLAST of Carg19753 vs. Swiss-Prot
Match: sp|Q9LFH3|LOG4_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 9.4e-57 Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 0
BLAST of Carg19753 vs. Swiss-Prot
Match: sp|Q8GW29|LOG7_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 219.2 bits (557), Expect = 3.6e-56 Identity = 102/142 (71.83%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Carg19753 vs. Swiss-Prot
Match: sp|Q8RUN2|LOG1_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 7.9e-56 Identity = 101/135 (74.81%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of Carg19753 vs. TrEMBL
Match: tr|A0A1S3BJF0|A0A1S3BJF0_CUCME (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103490551 PE=3 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 3.2e-70 Identity = 132/139 (94.96%), Postives = 135/139 (97.12%), Query Frame = 0
BLAST of Carg19753 vs. TrEMBL
Match: tr|A0A0A0KB16|A0A0A0KB16_CUCSA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G127300 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 7.2e-70 Identity = 132/139 (94.96%), Postives = 134/139 (96.40%), Query Frame = 0
BLAST of Carg19753 vs. TrEMBL
Match: tr|A0A2N9J8R8|A0A2N9J8R8_FAGSY (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60731 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 6.7e-68 Identity = 127/145 (87.59%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Carg19753 vs. TrEMBL
Match: tr|A0A2P4HWA0|A0A2P4HWA0_QUESU (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Quercus suber OX=58331 GN=CFP56_71166 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 6.7e-68 Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Carg19753 vs. TrEMBL
Match: tr|A0A2I4GZ73|A0A2I4GZ73_9ROSI (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Juglans regia OX=51240 GN=LOC109012143 PE=3 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.0e-67 Identity = 129/151 (85.43%), Postives = 138/151 (91.39%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|