Cp4.1LG05g13550 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g13550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCytokinin riboside 5'-monophosphate phosphoribohydrolase
LocationCp4.1LG05 : 9513004 .. 9514987 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCTATTTGTTGAAATAGAATGTAGTTGAAAAAGTAACAGGGAAGGACAATTGTTGCAGCATTTGTTTATATCACAAACCTACATTGCATGGTAGACTCTTTACCTTTTCCCCTCTTTTTTTCTCCTTTAACTCGTTTAACTCTTCTTTCAGAGACTACACGGACTTTTTGGACATAATGTGGCGTTAATATAAAGCGGCTATTCCCTAACATCCGAGTGGCCTATAGCAGAGTGAAATCGAAACTTTCCCCTGTATGTACATGTTCGGATATCCACATGTAAAACTGATCACGTAGCTCCTCTTGGCAGAAACCAGAGCAGTGAAATGGAAGGGAAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTATTTCTTTGAATATCTCTCTCTTTTATCCATTTTCAAAAGCTTCTTGATGTTTTTCTCTTCCCCTCTCTCTCTTCCATTCTTTATATGCATATATATTACACTGTATTTTCTCTGTGAAGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATTGTGGTGGAGGGAGAGTCATGGGGTAAGTGATCCAAAGCACTTTTGTGAGATCCCACGTCGGTTGGGGAGAAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCAAGCAACGCGTTTTAAACTTCTATTATGTACATGTTTGAGGTTTCAAAGCATGCTTTGGTTTTGTTCATTTGCAGGATCATTCCTAGGACACTAATGAACAAAGAGGTGAGAAGCATATCAATACCGTAATTTGTTGAATTTTGTTTTGGCTTAATCAAAGTTGTAGCTAAAACTTAACTTGATTCTTCCTCTCTAAAAAAACGATCATTTCCTGGGGGGAAAACTACAGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTTCCATCAACCCCTTTAACCTTTCCTATTCAGAAACACAATTCCACAATTCTTCTTTTTTTTTTATCCTTATTGCACTGATTTTCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGACAAACCAGTAAATTCAAAAAAACAGATTACCACAAGTTTCATTTCGATCTCCCCTTAAAGTTCCTTCAGCAAATTCTCATTCTCAGGTTGGCTTGCTGAATGTAGACGGCTACTACAACTACCTCCTCACTTTCATCGACCAAGCAGTGGAAGATGGATTCATAAAACCATCACAACGCAACATCATAGTGTCCGCACACAACGCCAAGGACCTGGTTCAGAAACTAGAGGTCAGTGATTCAGTCAGACATTTCGTCGAACAGTTGGTGGGCATATTTTAAAATTCCACAATTTGAAGCAGATTAAAGATTATATTCGACTCATGATTATAATGTTGGTTTGTTTAGGAGTACGTGCCTGTACACGACGAAGTGATAGCCAAATCGAGATGGGAAATTGAGCAGCCACCACAACAACAACAGCATCAGCAGCAAAAACAAGTGGGGTTCGAACCCAAAACTTTCCATGCTCAAATCACCCTGTAAAGTGGAAACTTGAAAACAAAAAGGAGAAAAAGATTCCGTGAATGAAATTGAAAGCAGGTGTTTTTTTTGAGGTGAATTTGGGTCATCACCGACCGTTCTATAATTGGGTGGGACATTCTCTTTTTGTTTGTAAGCTTATGAGAATTAAGGGGAAAAAATCGAGTACTAGTAGAAATTCTTGTATTTGAAGCCTAAAATTTGGTTATCCAAAATTTGTATTAATCTTACTCCATCCCTACTGTTTGGATTATATATTTGGATTATATA

mRNA sequence

TTTCCTATTTGTTGAAATAGAATGTAGTTGAAAAAGTAACAGGGAAGGACAATTGTTGCAGCATTTGTTTATATCACAAACCTACATTGCATGAGACTACACGGACTTTTTGGACATAATGTGGCGTTAATATAAAGCGGCTATTCCCTAACATCCGAGTGGCCTATAGCAGAGTGAAATCGAAACTTTCCCCTGTATGTACATGTTCGGATATCCACATGTAAAACTGATCACGTAGCTCCTCTTGGCAGAAACCAGAGCAGTGAAATGGAAGGGAAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGACAAACCAGTTGGCTTGCTGAATGTAGACGGCTACTACAACTACCTCCTCACTTTCATCGACCAAGCAGAGTACGTGCCTGTACACGACGAAGTGATAGCCAAATCGAGATGGGAAATTGAGCAGCCACCACAACAACAACAGCATCAGCAGCAAAAACAAGTGGGGTTCGAACCCAAAACTTTCCATGCTCAAATCACCCTGTAAAGTGGAAACTTGAAAACAAAAAGGAGAAAAAGATTCCGTGAATGAAATTGAAAGCAGGTGTTTTTTTTGAGGTGAATTTGGGTCATCACCGACCGTTCTATAATTGGGTGGGACATTCTCTTTTTGTTTGTAAGCTTATGAGAATTAAGGGGAAAAAATCGAGTACTAGTAGAAATTCTTGTATTTGAAGCCTAAAATTTGGTTATCCAAAATTTGTATTAATCTTACTCCATCCCTACTGTTTGGATTATATATTTGGATTATATA

Coding sequence (CDS)

ATGGAAGGGAAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGCGTGTTTTGTGGGAGCAGCACAGGAAAGAGAGGCTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGATTTCAAGAAGGTTGGAGCTTGTTTATGGAGGTGGGAGTATTGGGCTAATGGGTCTGATAACTGGTGAAACAGTAGGAGAGGTAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATTGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTTTTAGAAGTAATCACTTGGGCTCAACTAGGCATCCATGACAAACCAGTTGGCTTGCTGAATGTAGACGGCTACTACAACTACCTCCTCACTTTCATCGACCAAGCAGAGTACGTGCCTGTACACGACGAAGTGATAGCCAAATCGAGATGGGAAATTGAGCAGCCACCACAACAACAACAGCATCAGCAGCAAAAACAAGTGGGGTTCGAACCCAAAACTTTCCATGCTCAAATCACCCTGTAA

Protein sequence

MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQAEYVPVHDEVIAKSRWEIEQPPQQQQHQQQKQVGFEPKTFHAQITL
Homology
[Close]
BLAST of Cp4.1LG05g13550 vs. Swiss-Prot
Match: LOG5_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana GN=LOG5 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 8.3e-64
Identity = 132/212 (62.26%), Postives = 144/212 (67.92%), Query Frame = 1 

Query: 4   KVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL------ 63
           ++VKSRFKRVCVFCGSS+GKR CY DAA DLAQEL++RRL LVYGGGSIGLMGL      
Sbjct: 2   EIVKSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVH 61

Query: 64  ------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEEL 123
                             ITGET GEV  V +MH+RKAEMARHSDCFIALPGGYGT+EEL
Sbjct: 62  EAGGHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEEL 121

Query: 124 LEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA------------------------- 164
           LEVI WAQLGIHDKPVGLLNVDGYYNYLLTFID+A                         
Sbjct: 122 LEVIAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQ 181

[Close]
BLAST of Cp4.1LG05g13550 vs. Swiss-Prot
Match: LOG3_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana GN=LOG3 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.4e-55
Identity = 112/199 (56.28%), Postives = 130/199 (65.33%), Query Frame = 1 

Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLI-------- 66
           KS+F+R+CVFCGSS GK+  Y+DAA+DL  EL+SR ++LVYGGGSIGLMGL+        
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 67  ----------------TGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                           TGETVGEVR V +MHQRKAEMA+HSD FIALPGGYGT+EELLEV
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEV 129

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 154
           ITWAQLGIHDKPVGLLNVDGYYN LL+FID+A                            
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189

[Close]
BLAST of Cp4.1LG05g13550 vs. Swiss-Prot
Match: LOGLA_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica GN=LOGL10 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-55
Identity = 114/197 (57.87%), Postives = 128/197 (64.97%), Query Frame = 1 

Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--------- 66
           +SRFKR+CVFCGSS GK+  Y DAAI+L  EL++R ++LVYGGGSIGLMGL         
Sbjct: 3   QSRFKRICVFCGSSQGKKRSYHDAAIELGNELVARSIDLVYGGGSIGLMGLVSQAVFDGG 62

Query: 67  ---------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                          I+GETVGEVRPV +MHQRKAEMAR SD FIALPGGYGT+EELLEV
Sbjct: 63  RHVIGVIPKTLMTPEISGETVGEVRPVADMHQRKAEMARQSDAFIALPGGYGTLEELLEV 122

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 152
           ITWAQLGIH KPVGLLNVDGYYN LLTFID+A                            
Sbjct: 123 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDKAVEEGFINTSARRIIVMAPTAEELMDKLE 182

[Close]
BLAST of Cp4.1LG05g13550 vs. Swiss-Prot
Match: LOG1_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.0e-55
Identity = 111/200 (55.50%), Postives = 133/200 (66.50%), Query Frame = 1 

Query: 6   VKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL-------- 65
           ++S+FKR+CVFCGSS G +  Y+DAAI+L  EL+SR ++LVYGGGSIGLMGL        
Sbjct: 3   IESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNG 62

Query: 66  ----------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLE 125
                           ITGETVGEV+ V +MHQRKAEMA+HSD FIALPGGYGT+EELLE
Sbjct: 63  GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLE 122

Query: 126 VITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA--------------------------- 154
           VITWAQLGIHDKPVGLLNV+GYYN LL+FID+A                           
Sbjct: 123 VITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKL 182

[Close]
BLAST of Cp4.1LG05g13550 vs. Swiss-Prot
Match: LOGL2_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-54
Identity = 113/208 (54.33%), Postives = 137/208 (65.87%), Query Frame = 1 

Query: 5   VVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL------- 64
           VV+SRF+RVCVFCGSS GK+  Y+DAAI+L +EL++R ++LVYGGGS+GLMGL       
Sbjct: 15  VVQSRFRRVCVFCGSSHGKKKIYQDAAIELGKELVARNIDLVYGGGSVGLMGLVSQAVHN 74

Query: 65  -----------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELL 124
                            I+GETVGEV+ V +MHQRKAEMAR SD FIALPGGYGT+EELL
Sbjct: 75  GGRHVIGVIPKTLMPREISGETVGEVKAVSDMHQRKAEMARQSDAFIALPGGYGTLEELL 134

Query: 125 EVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA-------------------------- 161
           EVI WAQLGIHDKPVGLLNVDGYYN LL+FID+A                          
Sbjct: 135 EVIAWAQLGIHDKPVGLLNVDGYYNPLLSFIDKAVEEGFIRPSARHIIVLAPTPKELIEK 194

[Close]
BLAST of Cp4.1LG05g13550 vs. TrEMBL
Match: A0A0A0KB16_CUCSA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus GN=Csa_6G127300 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.5e-77
Identity = 159/231 (68.83%), Postives = 165/231 (71.43%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEG+VVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 1   MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGE RPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHHGGGRVMGIIPRTLMNKEITGETVGETRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNV+GYYN LLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVDDGFIKPSQRKIIVSAPNAKD 180

[Close]
BLAST of Cp4.1LG05g13550 vs. TrEMBL
Match: A0A0D2Q9I5_GOSRA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Gossypium raimondii GN=B456_002G203400 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-73
Identity = 152/231 (65.80%), Postives = 163/231 (70.56%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDAA++LAQEL++RRL+LVYGGGSIGLMGL   
Sbjct: 3   MEGKVVKSRFKRVCVFCGSSTGKRKCYRDAAVELAQELVARRLDLVYGGGSIGLMGLVSQ 62

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV NMHQRKAEMARHSDCFIALPGGYGT+
Sbjct: 63  AVHHAGGNVLGIIPRTLMSKEITGETVGEVRPVANMHQRKAEMARHSDCFIALPGGYGTL 122

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFID+A                      
Sbjct: 123 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNATE 182

[Close]
BLAST of Cp4.1LG05g13550 vs. TrEMBL
Match: A0A0B0PF87_GOSAR (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Gossypium arboreum GN=F383_30015 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.2e-73
Identity = 151/231 (65.37%), Postives = 162/231 (70.13%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDAA++LAQEL++RRL+LVYGGGSIGLMGL   
Sbjct: 3   MEGKVVKSRFKRVCVFCGSSTGKRKCYRDAAVELAQELVARRLDLVYGGGSIGLMGLVSQ 62

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV NMHQRKAEMARHSDCFIALPGGYGT+
Sbjct: 63  AVHHAGGNVLGIIPRTLMSKEITGETVGEVRPVANMHQRKAEMARHSDCFIALPGGYGTL 122

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFID+A                      
Sbjct: 123 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKE 182

[Close]
BLAST of Cp4.1LG05g13550 vs. TrEMBL
Match: D7U4W2_VITVI (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Vitis vinifera GN=VIT_03s0038g03420 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-71
Identity = 148/231 (64.07%), Postives = 161/231 (69.70%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           ME KVV SRFK VCVFCGSSTGKR CYRDAA++L QEL++RRL+LVYGGGSIGLMGL   
Sbjct: 1   MEEKVVYSRFKSVCVFCGSSTGKRNCYRDAAVELGQELVARRLDLVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV +MHQRKAEMARHSDCFIALPGGYGT+
Sbjct: 61  AVHRGGGHVLGIIPRTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTL 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFID+A                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKE 180

[Close]
BLAST of Cp4.1LG05g13550 vs. TrEMBL
Match: A0A061DYK9_THECC (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Theobroma cacao GN=TCM_006501 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.4e-70
Identity = 146/231 (63.20%), Postives = 158/231 (68.40%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEG VVKSRFKRVCVFCGSSTGKR CYRDAA++LAQEL++RRL+LVYGGGSIGLMGL   
Sbjct: 3   MEGNVVKSRFKRVCVFCGSSTGKRKCYRDAAVELAQELVARRLDLVYGGGSIGLMGLVSQ 62

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV +MHQRKAEMARHSDCFIALPGGYGT+
Sbjct: 63  AVHRAGRNVLGIIPRTLMSKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTL 122

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFID+A                      
Sbjct: 123 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKE 182

[Close]
BLAST of Cp4.1LG05g13550 vs. TAIR10
Match: AT4G35190.1 (AT4G35190.1 Putative lysine decarboxylase family protein)

HSP 1 Score: 244.6 bits (623), Expect = 4.7e-65
Identity = 132/212 (62.26%), Postives = 144/212 (67.92%), Query Frame = 1 

Query: 4   KVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL------ 63
           ++VKSRFKRVCVFCGSS+GKR CY DAA DLAQEL++RRL LVYGGGSIGLMGL      
Sbjct: 2   EIVKSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVH 61

Query: 64  ------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEEL 123
                             ITGET GEV  V +MH+RKAEMARHSDCFIALPGGYGT+EEL
Sbjct: 62  EAGGHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEEL 121

Query: 124 LEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA------------------------- 164
           LEVI WAQLGIHDKPVGLLNVDGYYNYLLTFID+A                         
Sbjct: 122 LEVIAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQ 181

[Close]
BLAST of Cp4.1LG05g13550 vs. TAIR10
Match: AT2G28305.1 (AT2G28305.1 Putative lysine decarboxylase family protein)

HSP 1 Score: 214.9 bits (546), Expect = 4.0e-56
Identity = 111/200 (55.50%), Postives = 133/200 (66.50%), Query Frame = 1 

Query: 6   VKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL-------- 65
           ++S+FKR+CVFCGSS G +  Y+DAAI+L  EL+SR ++LVYGGGSIGLMGL        
Sbjct: 3   IESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNG 62

Query: 66  ----------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLE 125
                           ITGETVGEV+ V +MHQRKAEMA+HSD FIALPGGYGT+EELLE
Sbjct: 63  GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLE 122

Query: 126 VITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA--------------------------- 154
           VITWAQLGIHDKPVGLLNV+GYYN LL+FID+A                           
Sbjct: 123 VITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKL 182

[Close]
BLAST of Cp4.1LG05g13550 vs. TAIR10
Match: AT3G53450.1 (AT3G53450.1 Putative lysine decarboxylase family protein)

HSP 1 Score: 214.2 bits (544), Expect = 6.8e-56
Identity = 113/199 (56.78%), Postives = 128/199 (64.32%), Query Frame = 1 

Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLI-------- 66
           KS+F R+CVFCGSS GK+  Y+DAA+DL  EL+ R ++LVYGGGSIGLMGL+        
Sbjct: 10  KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 67  ----------------TGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                           TGETVGEVR V +MHQRKAEMARHSD FIALPGGYGT+EELLEV
Sbjct: 70  RHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 129

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 154
           ITWAQLGIHDKPVGLLNVDGYYN LL+FID+A                            
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189

[Close]
BLAST of Cp4.1LG05g13550 vs. TAIR10
Match: AT5G06300.1 (AT5G06300.1 Putative lysine decarboxylase family protein)

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-53
Identity = 108/196 (55.10%), Postives = 126/196 (64.29%), Query Frame = 1 

Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--------- 66
           KSRFKR+CVFCGSS+GK+  Y++AAI L  EL+ RR++LVYGGGS+GLMGL         
Sbjct: 5   KSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGG 64

Query: 67  ---------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEV 126
                          ITGET+GEV+ V +MHQRKAEMAR +D FIALPGGYGT+EELLEV
Sbjct: 65  RHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEV 124

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------------- 151
           ITWAQLGIH KPVGLLNVDGYYN LLTFID+A                            
Sbjct: 125 ITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLE 184

[Close]
BLAST of Cp4.1LG05g13550 vs. TAIR10
Match: AT2G37210.2 (AT2G37210.2 lysine decarboxylase family protein)

HSP 1 Score: 200.7 bits (509), Expect = 7.7e-52
Identity = 111/223 (49.78%), Postives = 129/223 (57.85%), Query Frame = 1 

Query: 7   KSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGLI-------- 66
           KS+F+R+CVFCGSS GK+  Y+DAA+DL  EL+SR ++LVYGGGSIGLMGL+        
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 67  ----------------TGETVGEVRPVDNMHQRKAEMARHSDCFIALP------------ 126
                           TGETVGEVR V +MHQRKAEMA+HSD FIALP            
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNML 129

Query: 127 ------------GGYGTMEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---- 154
                        GYGT+EELLEVITWAQLGIHDKPVGLLNVDGYYN LL+FID+A    
Sbjct: 130 SWSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEG 189

[Close]
BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: gi|778712791|ref|XP_011656936.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 5.0e-77
Identity = 159/231 (68.83%), Postives = 165/231 (71.43%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEG+VVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 1   MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGE RPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHHGGGRVMGIIPRTLMNKEITGETVGETRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNV+GYYN LLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVDDGFIKPSQRKIIVSAPNAKD 180

[Close]
BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: gi|778712789|ref|XP_011656935.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X1 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 5.0e-77
Identity = 159/231 (68.83%), Postives = 165/231 (71.43%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEG+VVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 25  MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 84

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGE RPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 85  AVHHGGGRVMGIIPRTLMNKEITGETVGETRPVDNMHQRKAEMARHSDCFIALPGGYGTM 144

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNV+GYYN LLTFIDQA                      
Sbjct: 145 EELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVDDGFIKPSQRKIIVSAPNAKD 204

[Close]
BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: gi|659094953|ref|XP_008448322.1| (PREDICTED: LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 157/231 (67.97%), Postives = 166/231 (71.86%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEG+VVKSRFKRVCVFCGSSTGKR CYRDAAIDLAQEL+SRRL LVYGGGSIGLMGL   
Sbjct: 1   MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQ 60

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGE+RPVDNMHQRKAEMARHSDCFIALPGGYGTM
Sbjct: 61  AVHHGGGRVMGIIPRTLMNKEITGETVGEIRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNV+GYYN LLTFIDQA                      
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVEDGFIKPSQRNIIVSAPNAKD 180

[Close]
BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: gi|823135747|ref|XP_012467633.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Gossypium raimondii])

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 152/231 (65.80%), Postives = 163/231 (70.56%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDAA++LAQEL++RRL+LVYGGGSIGLMGL   
Sbjct: 3   MEGKVVKSRFKRVCVFCGSSTGKRKCYRDAAVELAQELVARRLDLVYGGGSIGLMGLVSQ 62

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV NMHQRKAEMARHSDCFIALPGGYGT+
Sbjct: 63  AVHHAGGNVLGIIPRTLMSKEITGETVGEVRPVANMHQRKAEMARHSDCFIALPGGYGTL 122

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFID+A                      
Sbjct: 123 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNATE 182

[Close]
BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match: gi|728844154|gb|KHG23597.1| (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 -like protein [Gossypium arboreum])

HSP 1 Score: 282.0 bits (720), Expect = 7.5e-73
Identity = 151/231 (65.37%), Postives = 162/231 (70.13%), Query Frame = 1 

Query: 1   MEGKVVKSRFKRVCVFCGSSTGKRGCYRDAAIDLAQELISRRLELVYGGGSIGLMGL--- 60
           MEGKVVKSRFKRVCVFCGSSTGKR CYRDAA++LAQEL++RRL+LVYGGGSIGLMGL   
Sbjct: 3   MEGKVVKSRFKRVCVFCGSSTGKRKCYRDAAVELAQELVARRLDLVYGGGSIGLMGLVSQ 62

Query: 61  ---------------------ITGETVGEVRPVDNMHQRKAEMARHSDCFIALPGGYGTM 120
                                ITGETVGEVRPV NMHQRKAEMARHSDCFIALPGGYGT+
Sbjct: 63  AVHHAGGNVLGIIPRTLMSKEITGETVGEVRPVANMHQRKAEMARHSDCFIALPGGYGTL 122

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDQA---------------------- 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFID+A                      
Sbjct: 123 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKE 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g13550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOG5_ARATH8.3e-6462.26Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis tha... [more]
LOG3_ARATH2.4e-5556.28Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha... [more]
LOGLA_ORYSJ4.1e-5557.87Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryz... [more]
LOG1_ARATH7.0e-5555.50Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis tha... [more]
LOGL2_ORYSJ1.2e-5454.33Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza... [more]
BLAST of Cp4.1LG05g13550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB16_CUCSA3.5e-7768.83Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus GN=C... [more]
A0A0D2Q9I5_GOSRA1.4e-7365.80Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Gossypium raimondii ... [more]
A0A0B0PF87_GOSAR5.2e-7365.37Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Gossypium arboreum G... [more]
D7U4W2_VITVI1.3e-7164.07Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Vitis vinifera GN=VI... [more]
A0A061DYK9_THECC5.4e-7063.20Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Theobroma cacao GN=T... [more]
BLAST of Cp4.1LG05g13550 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35190.14.7e-6562.26 Putative lysine decarboxylase family protein[more]
AT2G28305.14.0e-5655.50 Putative lysine decarboxylase family protein[more]
AT3G53450.16.8e-5656.78 Putative lysine decarboxylase family protein[more]
AT5G06300.13.1e-5355.10 Putative lysine decarboxylase family protein[more]
AT2G37210.27.7e-5249.78 lysine decarboxylase family protein[more]
BLAST of Cp4.1LG05g13550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778712791|ref|XP_011656936.1|5.0e-7768.83PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform... [more]
gi|778712789|ref|XP_011656935.1|5.0e-7768.83PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform... [more]
gi|659094953|ref|XP_008448322.1|2.8e-7567.97PREDICTED: LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate phosphoriboh... [more]
gi|823135747|ref|XP_012467633.1|2.0e-7365.80PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Gossyp... [more]
gi|728844154|gb|KHG23597.1|7.5e-7365.37Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 -like protein [Gos... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005269LOG
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0009691 cytokinin biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016829 lyase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g13550.1Cp4.1LG05g13550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005269Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGTIGRFAMsTIGR00730TIGR00730coord: 63..133
score: 3.9
NoneNo IPR availableGENE3DG3DSA:3.40.50.450coord: 62..134
score: 5.2E-39coord: 3..61
score: 2.9
NoneNo IPR availablePANTHERPTHR31223FAMILY NOT NAMEDcoord: 1..179
score: 8.8E
NoneNo IPR availablePANTHERPTHR31223:SF14CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG5coord: 1..179
score: 8.8E
NoneNo IPR availableunknownSSF102405MCP/YpsA-likecoord: 9..143
score: 1.53

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g13550CmaCh20G007280Cucurbita maxima (Rimu)cmacpeB579
Cp4.1LG05g13550CmaCh02G002820Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g13550CmoCh02G002760Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g13550MELO3C013288.2Melon (DHL92) v3.6.1cpemedB815
Cp4.1LG05g13550CsaV3_6G012720Cucumber (Chinese Long) v3cpecucB0940
Cp4.1LG05g13550CsaV3_7G001550Cucumber (Chinese Long) v3cpecucB0952
Cp4.1LG05g13550Bhi10G000951Wax gourdcpewgoB0963
Cp4.1LG05g13550Bhi05G001388Wax gourdcpewgoB0934
Cp4.1LG05g13550CsGy6G010350Cucumber (Gy14) v2cgybcpeB862
Cp4.1LG05g13550CsGy7G001360Cucumber (Gy14) v2cgybcpeB978
Cp4.1LG05g13550Carg19753Silver-seed gourdcarcpeB1194
Cp4.1LG05g13550Carg16148Silver-seed gourdcarcpeB0488
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g13550Cp4.1LG15g06240Cucurbita pepo (Zucchini)cpecpeB280
Cp4.1LG05g13550Cp4.1LG16g03330Cucurbita pepo (Zucchini)cpecpeB318
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g13550Wild cucumber (PI 183967)cpecpiB763
Cp4.1LG05g13550Cucumber (Chinese Long) v2cpecuB761
Cp4.1LG05g13550Bottle gourd (USVL1VR-Ls)cpelsiB607
Cp4.1LG05g13550Watermelon (Charleston Gray)cpewcgB649
Cp4.1LG05g13550Watermelon (Charleston Gray)cpewcgB652
Cp4.1LG05g13550Watermelon (97103) v1cpewmB736
Cp4.1LG05g13550Melon (DHL92) v3.5.1cpemeB666
Cp4.1LG05g13550Melon (DHL92) v3.6.1cpemedB795
Cp4.1LG05g13550Cucurbita pepo (Zucchini)cpecpeB495
Cp4.1LG05g13550Cucumber (Gy14) v1cgycpeB0210
Cp4.1LG05g13550Cucumber (Gy14) v1cgycpeB0301
Cp4.1LG05g13550Cucurbita maxima (Rimu)cmacpeB552
Cp4.1LG05g13550Cucurbita moschata (Rifu)cmocpeB528