Carg02005 (gene) Silver-seed gourd

Overview
NameCarg02005
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDNA topoisomerase 4 subunit B (DUF810)
LocationCucurbita_argyrosperma_scaffold_003 : 1658869 .. 1661744 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGCGATGCTTAAACCCTATGAAGTTCAGTCCCCAGGGTTTTGCCTTTCATGTCGTACGGACGATATTAAAGTTAATTAAAAAAAATATATCTCATTTATAAAAGGTAATTAAAAAATCGTATTTAATGATTTTTTCAATTAATTAAATTATAATGTTTTCGAGCTAAAATGTGAAAGGAGAAGAAAAAAAAAGAATAAAAGGCGACGGAAGAATTTGACTAATCTAACGTTTACATCTTTCAATGATCGAGAGGACTAGATGAATCTCCGATTTCTTAGCTCAGGCGGCCATTTTTCCCGATTCAAGCTTCCATAGATAGCCAGACTGGTAGGTAATCTCACCGCCATTGATTCGACGATCATTTTCTTCGACCAGGCAGCTGAGCGAAGGTATTAATGGAAGTTGTATTTCTACTGTCTCTCAAGCTTCCAATGGAATTTCTTTCAGTTTTCTTGTTTCTGAAGCTTCTACTTCTGCCAGTTCCAGAATCTGATACGAAGTGAATCGAACGGAGTGTTTAATTTCAGATTGCTACTTCGATTTGCAGGATCTATTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGAGGACTCTGCTCAGATCACTCATTTCTGGTGAATCGGGGTATGGTTAGGGTTCCAGGACTGTGAACTTAGTTTTACAACAGATTAAATGCACAGGAAAAGTCGTTGATCTTGAAACTATTACGTTTAACGTGCGTTTGCAAAGCTCTAATTCATGAATTCGATTTCCAGTTGGCTTTGCTATCAGAACAATTTGTAGCTCTTAGTGATGGAACGGATTGACATAGTCTGAAATTGAGGGATTTCACTATTAGTATCATCTAGCTTCGCTTCACCATGGACGAGTAAGTAATCTCCGGAATGTCTAATGGCTATTCTTTTGTTAGATGAACACGACTATCTACAATGGTATGATATTGCCCACTTTAATAAGCTCTCATGGCTTCTCCAAAAGACCTCCTACCAATGGAAATAGTATTCCTTGATTATAAACTCATGATCATTCCCTAAATTAGTCGACGTGAACGGAAGCCGGTAAAATAGAATGGCTATAATTTTAGTGTTATTAGTGTTGTTTGCCTGTTTGCACTTCCATTTCGGTTGTTTTGGTTTTGGATGAACAACGTAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGTTTTGCAACGGTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATAAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACCCTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGTGATTTTCCGTGTTCATAACGATATTGTTTAGTTTCGTTTATTTAAAAAATATTCTTATGTTATTATCTGTCGAAATAGGTGGAATGCTTGACCTATCTGAAGCCATAAGAGATCACCATGGCCTTGCAGGGTTTCCTCAGATGGTAAGTTTGATTCACATGCAATTTCTCCTCATACGACATAAGACATAAGGTCTTTTAATCATGTCATAAAGATTTCATGGTGGATGACAACATCCATTGCTTTATTGTATTCTTTTTAAAGTTTTAGAGAATTATTTTTAAGATAATAAGTTATATTCAGTCTTAACTGCCATGAAAGTTACAATAACTTTGAAGGCTATAAATAGTCATTCATGTTCTTTGTTTTAGTAGAACATTTTCCATGTTAAAAGGAAAGTTGTATATTATGCTTTTTTTTAAGTCATGAGACGTGTTTCTTTGATGACAAGACCCATATATGTTGTTTAGATTTAAAGTCATAAGCTTGTTCCTTTACTTTTTTTTTTTTTTTCTTTTTTAGATTTGCATGCTAGAATCACTTAAGTGGTATAGATTAAGCTATCTCGTGGAGTGATTCAAATCACGAGTTTAAAAATGAGTTTCTTTTACTCTTGATCTTGATCATCAAGATAATCTGTTCCAAAAATTTTCCTTGGGTTGATTTCTTATCCTTTTTGAGTTGACATGATTCCTTATCGTTTTTGGAGTTAGGTTGATTCCTTATCGTTTTTTAGTTCTTGAATAATTTAAATCTAAAGATCTCGTTAGTTAACAAAGTTTTTAGATCAAATCCTAAGAGTTTCATATCACTCTGGTGAATGAAGTTTTCCCTCTTGTTGATCCATCCATCATATTTGATCTATGATTCGTGTTAATAAACTATTGCTAATCTATAAGTTATCTTGACATTACAGAATAATTCAGGTTTTGGGGATGGATTTTTGGTTACGGATTTAGACTCTTCAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCAGACCTCCTCCTGTCTATACAGCTCCGGCAGTAATCACACCGTCGCTTACCAAGACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGATTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTTGTCAGGAAGATTGAAAATGTAGCTACCGGCCCTAGTAACCGACCGAAGCTGGCTCGTGTTACTGCTGAATGTGATGAAATGTAATACTCGAGTTACAAATTTCTTCTGGGGTTGGATTTAATATGCGCTTAGAAGAACGGTCAGACATTTCCATCCATTTCGAAAGGTCGTGAACTCTTTTTAGTTGCAATTTGCACGAGAATGGACCATGAAACTTATGTTTGTTTGCTTAGATATGTCAATGCTCTTCTTGTTGTATGGCATTAGTTCAATGATAATGATTCAAATACTTTATACATACATATATACATATATATACATACATA

mRNA sequence

ATGCCGGCGATGCTTAAACCCTATGAAGTTCAGTCCCCAGGGTTTTGCCTTTCATGTCGTACGGACGATATTAAAGATCTATTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGAGGACTCTGCTCAGATCACTCATTTCTGGTGAATCGGGGTATGGTTAGGGTTCCAGGACTGGAAAACGCCATCGAGGTTTTGCAACGGTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATAAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACCCTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGTGGAATGCTTGACCTATCTGAAGCCATAAGAGATCACCATGGCCTTGCAGGGTTTCCTCAGATGAATAATTCAGGTTTTGGGGATGGATTTTTGGTTACGGATTTAGACTCTTCAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCAGACCTCCTCCTGTCTATACAGCTCCGGCAGTAATCACACCGTCGCTTACCAAGACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGATTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTTGTCAGGAAGATTGAAAATGTAGCTACCGGCCCTAGTAACCGACCGAAGCTGGCTCGTGTTACTGCTGAATGTGATGAAATGTAATACTCGAGTTACAAATTTCTTCTGGGGTTGGATTTAATATGCGCTTAGAAGAACGGTCAGACATTTCCATCCATTTCGAAAGGTCGTGAACTCTTTTTAGTTGCAATTTGCACGAGAATGGACCATGAAACTTATGTTTGTTTGCTTAGATATGTCAATGCTCTTCTTGTTGTATGGCATTAGTTCAATGATAATGATTCAAATACTTTATACATACATATATACATATATATACATACATA

Coding sequence (CDS)

ATGCCGGCGATGCTTAAACCCTATGAAGTTCAGTCCCCAGGGTTTTGCCTTTCATGTCGTACGGACGATATTAAAGATCTATTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGAGGACTCTGCTCAGATCACTCATTTCTGGTGAATCGGGGTATGGTTAGGGTTCCAGGACTGGAAAACGCCATCGAGGTTTTGCAACGGTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATAAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACCCTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGTGGAATGCTTGACCTATCTGAAGCCATAAGAGATCACCATGGCCTTGCAGGGTTTCCTCAGATGAATAATTCAGGTTTTGGGGATGGATTTTTGGTTACGGATTTAGACTCTTCAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCAGACCTCCTCCTGTCTATACAGCTCCGGCAGTAATCACACCGTCGCTTACCAAGACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGATTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTTGTCAGGAAGATTGA

Protein sequence

MPAMLKPYEVQSPGFCLSCRTDDIKDLLAYGQLAVTVGAARATAGQLGLGGGGLCSDHSFLVNRGMVRVPGLENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGGMLDLSEAIRDHHGLAGFPQMNNSGFGDGFLVTDLDSSGPPPKRAPPPVSASRPPPVYTAPAVITPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED
Homology
[Close]
BLAST of Carg02005 vs. NCBI nr
Match: XP_022957486.1 (uncharacterized protein LOC111458870 [Cucurbita moschata] >XP_022957487.1 uncharacterized protein LOC111458870 [Cucurbita moschata] >XP_022957488.1 uncharacterized protein LOC111458870 [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 4.4e-69
Identity = 159/164 (96.95%), Postives = 159/164 (96.95%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENAIE LQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG
Sbjct: 4   ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDGFLVTDLDSSGXXXXXXXXXXXXXXXXXXXTAP 192
           MLDLSEAIRDHHGLAGFPQMNNSG GDGF VTDLDS  XXXXXXXXXXXXXXXXXXXTAP
Sbjct: 64  MLDLSEAIRDHHGLAGFPQMNNSGSGDGFFVTDLDSXXXXXXXXXXXXXXXXXXXXXTAP 123

Query: 193 AVITPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 237
           AVITPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED
Sbjct: 124 AVITPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 167

[Close]
BLAST of Carg02005 vs. NCBI nr
Match: XP_022985375.1 (uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima] >XP_022985384.1 uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima] >XP_022985392.1 uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima])

HSP 1 Score: 243.0 bits (619), Expect = 9.9e-61
Identity = 151/170 (88.82%), Postives = 152/170 (89.41%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISV+YVLNCARKGG
Sbjct: 4   ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVNYVLNCARKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDGFLVTDLDSSG------XXXXXXXXXXXXXXXX 192
           MLDLSEAIRDHHGL GFPQMNNSG GD FLVTDLDSSG      XXXXXXXXXXXXXXXX
Sbjct: 64  MLDLSEAIRDHHGLTGFPQMNNSGSGDEFLVTDLDSSGPXXXXXXXXXXXXXXXXXXXXX 123

Query: 193 XXXTAPAVITPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 237
           XXX      TPSLTKTNVSRSGSLESSQARGLTGY IEGAGGRPFG  ED
Sbjct: 124 XXXXXXXXXTPSLTKTNVSRSGSLESSQARGLTGYVIEGAGGRPFGWLED 173

[Close]
BLAST of Carg02005 vs. NCBI nr
Match: XP_023552519.1 (uncharacterized protein LOC111810128 [Cucurbita pepo subsp. pepo] >XP_023552599.1 uncharacterized protein LOC111810128 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 3.2e-59
Identity = 148/170 (87.06%), Postives = 149/170 (87.65%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENAIE LQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG
Sbjct: 4   ENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDGFLVTDLDS------SGXXXXXXXXXXXXXXXX 192
           +LDLSEAIRDHHGL GFPQMNNSG GD F VTDLDS        XXXXXXXXXXXXXXXX
Sbjct: 64  ILDLSEAIRDHHGLTGFPQMNNSGSGDEFFVTDLDSXXXXXXXXXXXXXXXXXXXXXXXX 123

Query: 193 XXXTAPAVITPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGCQED 237
           XXX       PSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFG QED
Sbjct: 124 XXXXXXXXXXPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED 173

[Close]
BLAST of Carg02005 vs. NCBI nr
Match: XP_022985402.1 (uncharacterized protein LOC111483402 isoform X2 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 2.4e-43
Identity = 120/139 (86.33%), Postives = 121/139 (87.05%), Query Frame = 0 

Query: 104 MPPGAVTLDDLDLDQISVDYVLNCARKGGMLDLSEAIRDHHGLAGFPQMNNSGFGDGFLV 163
           MPPGAVTLDDLDLDQISV+YVLNCARKGGMLDLSEAIRDHHGL GFPQMNNSG GD FLV
Sbjct: 1   MPPGAVTLDDLDLDQISVNYVLNCARKGGMLDLSEAIRDHHGLTGFPQMNNSGSGDEFLV 60

Query: 164 TDLDSSG------XXXXXXXXXXXXXXXXXXXTAPAVITPSLTKTNVSRSGSLESSQARG 223
           TDLDSSG      XXXXXXXXXXXXXXXXXXX      TPSLTKTNVSRSGSLESSQARG
Sbjct: 61  TDLDSSGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSLTKTNVSRSGSLESSQARG 120

Query: 224 LTGYGIEGAGGRPFGCQED 237
           LTGY IEGAGGRPFG  ED
Sbjct: 121 LTGYVIEGAGGRPFGWLED 139

[Close]
BLAST of Carg02005 vs. NCBI nr
Match: XP_022945388.1 (uncharacterized protein LOC111449639 isoform X1 [Cucurbita moschata] >XP_022945389.1 uncharacterized protein LOC111449639 isoform X1 [Cucurbita moschata] >XP_022945390.1 uncharacterized protein LOC111449639 isoform X1 [Cucurbita moschata])

HSP 1 Score: 174.1 bits (440), Expect = 5.6e-40
Identity = 120/159 (75.47%), Postives = 128/159 (80.50%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENAIE+LQR RRDRQILLDFVL+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVLNCA+KG 
Sbjct: 4   ENAIELLQRYRRDRQILLDFVLSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKGA 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDG-FLVTDLDSSG------XXXXXXXXXXXXXXX 192
           ML+LSEAIRD+H L GFPQMNNSG GD  FLVTDLDSSG      XXXXXXXXXXXXXXX
Sbjct: 64  MLELSEAIRDYHDLTGFPQMNNSGSGDEFFLVTDLDSSGSPPKRXXXXXXXXXXXXXXXX 123

Query: 193 XXXXTAPAVITPSLTKTNVSRSGSLESSQARGLTGYGIE 225
           XXXX         LT+TNVSRS S ESS AR LT   IE
Sbjct: 124 XXXXXXXXXXXXXLTETNVSRSESFESSHARELTVDDIE 162

[Close]
BLAST of Carg02005 vs. TAIR10
Match: AT5G06970.1 (Protein of unknown function (DUF810))

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-33
Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENA+E+LQR RRDR+ LLDF+LA  LIKKV+MPPGAVTLDD+DLDQ+SVDYV+NCA+KGG
Sbjct: 4   ENAVEILQRYRRDRRKLLDFMLAGSLIKKVIMPPGAVTLDDVDLDQVSVDYVINCAKKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDG-FLVTDLDSSG 171
           ML+L+EAIRD+H   G P MN+ G  D  FL T  +SSG
Sbjct: 64  MLELAEAIRDYHDHIGLPYMNSVGTADEFFLATIPESSG 102

[Close]
BLAST of Carg02005 vs. TAIR10
Match: AT4G11670.1 (Protein of unknown function (DUF810))

HSP 1 Score: 71.6 bits (174), Expect = 7.2e-13
Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 0 

Query: 78  VLQRCRRDRQILLDFVLASGLIKKVVMPPGAVT-LDDLDLDQISVDYVLNCARKGGMLDL 137
           +LQR R DR+ L++F+++SGL+K++  P G+ T L   DLD +S DYVL+C + GG++D+
Sbjct: 4   LLQRYRNDRRKLMEFLMSSGLVKELRSPSGSPTSLSPADLDALSADYVLDCVKSGGVVDV 63

Query: 138 SEAIRDHHGLAGFPQMNNSGFGDG-FLVTDLDSSG 171
           S+    ++  + +P   +S  GD  FLV+  D +G
Sbjct: 64  SKGREKYNFDSSYPVTIHSESGDSYFLVSSPDLAG 98

[Close]
BLAST of Carg02005 vs. Swiss-Prot
Match: sp|Q8RX56|UNC13_ARATH (Protein unc-13 homolog OS=Arabidopsis thaliana OX=3702 GN=PATROL1 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENA+E+LQR RRDR+ LLDF+LA  LIKKV+MPPGAVTLDD+DLDQ+SVDYV+NCA+KGG
Sbjct: 4   ENAVEILQRYRRDRRKLLDFMLAGSLIKKVIMPPGAVTLDDVDLDQVSVDYVINCAKKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDG-FLVTDLDSSG 171
           ML+L+EAIRD+H   G P MN+ G  D  FL T  +SSG
Sbjct: 64  MLELAEAIRDYHDHIGLPYMNSVGTADEFFLATIPESSG 102

[Close]
BLAST of Carg02005 vs. TrEMBL
Match: tr|A0A1S3BH15|A0A1S3BH15_CUCME (uncharacterized protein LOC103489571 OS=Cucumis melo OX=3656 GN=LOC103489571 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.0e-37
Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENAIE+LQR RRDRQ LLDFVL+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVLNCA+KG 
Sbjct: 4   ENAIELLQRYRRDRQTLLDFVLSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKGA 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDG-FLVTDLDSSG 171
           ML+LSEAIRD+H L GFPQMNNSG GD  FLVTDLDSSG
Sbjct: 64  MLELSEAIRDYHDLTGFPQMNNSGCGDEFFLVTDLDSSG 102

[Close]
BLAST of Carg02005 vs. TrEMBL
Match: tr|A0A0A0KWZ4|A0A0A0KWZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G625960 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 81/99 (81.82%), Postives = 89/99 (89.90%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           ENAIE+LQR RRDRQ LLDFVL+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVLNCA+KG 
Sbjct: 4   ENAIELLQRYRRDRQTLLDFVLSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKGA 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSGFGDG-FLVTDLDSSG 171
           ML+LS+AIRD+H L GFPQMNNSG GD  FLVTDLDSSG
Sbjct: 64  MLELSDAIRDYHDLTGFPQMNNSGSGDEFFLVTDLDSSG 102

[Close]
BLAST of Carg02005 vs. TrEMBL
Match: tr|A0A061FQX4|A0A061FQX4_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_044838 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.8e-34
Identity = 87/153 (56.86%), Postives = 106/153 (69.28%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           E A+E+LQR RRDRQILLDF+L+  L+KKVVMPPGAVTLDD+DLDQ+SVDYVL+C +KGG
Sbjct: 4   ETAVELLQRYRRDRQILLDFILSGSLVKKVVMPPGAVTLDDVDLDQVSVDYVLSCIKKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSG-FGDGFLVTDLDSSGXXXXXXXXXXXXXXXXXXXTA 192
           ML+LSEAIRD+H   G PQMN++G  G+ FLVT+ +SSG        X          +A
Sbjct: 64  MLELSEAIRDYHDHTGLPQMNSAGSAGEFFLVTNTESSGSPPRRAPPXIPVSVSIPTPSA 123

Query: 193 PAVITPSLTKTNVSRSGSLESSQARGLTGYGIE 225
           P V  PS     VSRS S +S Q + LT   IE
Sbjct: 124 P-VFAPSPVLPTVSRSESFDSEQVQELTVDDIE 155

[Close]
BLAST of Carg02005 vs. TrEMBL
Match: tr|A0A1R3JAA5|A0A1R3JAA5_COCAP (Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_07041 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 83/148 (56.08%), Postives = 104/148 (70.27%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           E+A+E+LQR RRDR+ILLDF+L+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVL+C +KGG
Sbjct: 4   ESAVELLQRYRRDRRILLDFILSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLSCIKKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSG-FGDGFLVTDLDSSGXXXXXXXXXXXXXXXXXXXTA 192
           ML+LSEAIRD+H   G P MN++G  G+ FLVT+L+SSG                   +A
Sbjct: 64  MLELSEAIRDYHDHTGLPNMNSAGSAGEFFLVTNLESSGSPPRRAPPPIPVSVSIPTPSA 123

Query: 193 PAVITPSLTKTNVSRSGSLESSQARGLT 220
           P +  PS   + VSRS S  S Q + LT
Sbjct: 124 P-LFAPSPVVSTVSRSESFNSEQVQELT 150

[Close]
BLAST of Carg02005 vs. TrEMBL
Match: tr|A0A1R3IXH3|A0A1R3IXH3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20721 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 83/148 (56.08%), Postives = 104/148 (70.27%), Query Frame = 0 

Query: 73  ENAIEVLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGG 132
           E+A+E+LQR RRDR+ILLDF+L+  LIKKVVMPPGAVTLDD+DLDQ+SVDYVL+C +KGG
Sbjct: 4   ESAVELLQRYRRDRRILLDFILSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLSCIKKGG 63

Query: 133 MLDLSEAIRDHHGLAGFPQMNNSG-FGDGFLVTDLDSSGXXXXXXXXXXXXXXXXXXXTA 192
           ML+LSEAIRD+H   G P MN++G  G+ FLVT+L+SSG                   +A
Sbjct: 64  MLELSEAIRDYHDHTGLPNMNSAGSAGEFFLVTNLESSGSPPRRAPPPIPVSVSIPTPSA 123

Query: 193 PAVITPSLTKTNVSRSGSLESSQARGLT 220
           P +  PS   + VSRS S  S Q + LT
Sbjct: 124 P-LFAPSPVVSTVSRSESFNSEQVQELT 150

The following BLAST results are available for this feature:
BLAST of Carg02005 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957486.14.4e-6996.95uncharacterized protein LOC111458870 [Cucurbita moschata] >XP_022957487.1 unchar... [more]
XP_022985375.19.9e-6188.82uncharacterized protein LOC111483402 isoform X1 [Cucurbita maxima] >XP_022985384... [more]
XP_023552519.13.2e-5987.06uncharacterized protein LOC111810128 [Cucurbita pepo subsp. pepo] >XP_023552599.... [more]
XP_022985402.12.4e-4386.33uncharacterized protein LOC111483402 isoform X2 [Cucurbita maxima][more]
XP_022945388.15.6e-4075.47uncharacterized protein LOC111449639 isoform X1 [Cucurbita moschata] >XP_0229453... [more]
BLAST of Carg02005 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G06970.16.2e-3368.69Protein of unknown function (DUF810)[more]
AT4G11670.17.2e-1340.00Protein of unknown function (DUF810)[more]
BLAST of Carg02005 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RX56|UNC13_ARATH1.1e-3168.69Protein unc-13 homolog OS=Arabidopsis thaliana OX=3702 GN=PATROL1 PE=2 SV=1[more]
BLAST of Carg02005 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BH15|A0A1S3BH15_CUCME5.0e-3782.83uncharacterized protein LOC103489571 OS=Cucumis melo OX=3656 GN=LOC103489571 PE=... [more]
tr|A0A0A0KWZ4|A0A0A0KWZ4_CUCSA1.1e-3681.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G625960 PE=4 SV=1[more]
tr|A0A061FQX4|A0A061FQX4_THECC1.8e-3456.86Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_044838 PE=4 SV=1[more]
tr|A0A1R3JAA5|A0A1R3JAA5_COCAP1.2e-3356.08Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_... [more]
tr|A0A1R3IXH3|A0A1R3IXH3_9ROSI1.2e-3356.08Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_20721 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008528DUF810
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02005-RACarg02005-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..192
NoneNo IPR availablePANTHERPTHR31280:SF2SUBFAMILY NOT NAMEDcoord: 73..197
IPR008528Protein of unknown function DUF810PANTHERPTHR31280FAMILY NOT NAMEDcoord: 73..197