Cp4.1LG01g09780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTTGTATTTCTACTGTCTCTCAAGCTTCCGATGGAATTTCTTTCAGTTTTCTTGTTTCTGAAGCTTCTACTTCTGCCAGTTCCAGAATTTGATACGAACTGAATCGAACGGAGTGTTTAATTGCAGATTGCTACTTCGATTTGCAGGATCCGGTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGTGGACTCTGCTCAGATCACTCATTTGTGGTGAATCGAGGTATGGTTAGGGTTCCAGGACTGAACTTAATTTTACAACAGATTAAATGCACAGGAAAAGTCGTTGATCTTGAAACTATTACGTTTAACGTGCGTTTGCAAAGCTCTAATTCATGAATTCGATTTCCAGTTGGCTTTGCTATCAGAAAAATTTGTAGCTCTTAGAGATGGAACGGATTGACATAGTCTGAAATTGAGGGATTTCAGTATTAGTATCATCTAGCTTCGCTTCACCATGGACGAGTAAGTAATCTCCCGAATGTCTAATGGCTATTCTCTTAATGGAAGCTAGTGAAATAGAATGGCTATCATTTTAGTGTTATTAGTGTTGTTTGCCTGTTTGCACTTCCATTTCGGTTGTTTTGGTTTTGGATGAACCACGTAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGATTTGCAACGCTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATTAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACACTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGTGATTTTCAGTGTTCATAACGATATTATTTAGTTTCGTTTATTTAAAAAATATTCTTATGTTATTATCTGTCGAAATAGGTGGAATTCTTGACCTATCTGAAGCCATAAGAGATCACCATGGCCTTACAGGGTTCCCTCAGATGGTAAGTTTGATTCACATGCAATTCTCTTGGTACGAAATAAGGTGATTTAATCGTGTCACAAAAATTTCATGGTAGATGACAAGATCCATATATTGTTTTAATCATGTCACAAAGGTTTCATGGTAGATGACAAGATCCATATATGTTGTTTAGATCTAAGAAGGCTTTATTGTATTGTTTTTTAAGTTTTAGAGAACTATTTTTAAGATTACAAGTTATATTCAGCTTAAAGACGATGAAAGTTGCCATAACTTTTTTTCAAGGCTATAAATAGTCATTTTTAATAGATGATTTTGGAGGTTAGAATGAAAGTTGCATATTATGCTGCCATACGTGTTCTTTTTGCATTTCTTGTGTTTAGACTTGCATGCTAAGTCATTCAAGTAATCTTGATCAAGCTATCATGTAGACTATCATGTAGATTGATTCAAATCACTAGTTTAAAAATTAGTTTTCTTTACTCTTGATCTTGATCATCAAGATAATCTGTTCCAAAATTTTTCCTCGGGTTGATTTCTTGTCGTTTTTTGGGTTGGTATGAATCCTTGTCGTTTTTGGGGTTGGATTGATTCCTTATTATTTTTGGGGTTGTTGAATAATTTAAATGTAAAGATCTCGTTCTTGAACAAGATTTTTAGATCAAATTCTAGGATGAGTGTTAATAAACTATTGCTAATTTATAAGTTATCTTGACATCCAGAATAATTCAGGTTCTGGGGATGAATTTTTTGTTACGGATTTAGATTCTTCAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCACACCTCCTCCTGTCTATACAGCTCCCGCAGTAGTTGCACCAACACCTATCCCCACACCGTCGCTAACCAAAACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGACTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTCGTCAGGAAGATTGA ATGGAAGTTGATCCGGTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGTGGACTCTGCTCAGATCACTCATTTGTGGTGAATCGAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGATTTGCAACGCTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATTAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACACTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCACACCTCCTCCTGTCTATACAGCTCCCGCAGTAGTTGCACCAACACCTATCCCCACACCGTCGCTAACCAAAACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGACTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTCGTCAGGAAGATTGA ATGGAAGTTGATCCGGTGGCTTATGGTCAACTAGCAGTCACCGTCGGAGCAGCTCGTGCCACCGCTGGGCAGCTTGGACTGGGAGGGGGTGGACTCTGCTCAGATCACTCATTTGTGGTGAATCGAGTGTTCATTCCATATAGGGAAAACGCCATCGAGGATTTGCAACGCTGCAGGCGGGACAGACAAATACTTCTTGATTTTGTACTGGCTAGTGGCTTGATTAAGAAGGTTGTAATGCCTCCTGGGGCAGTCACACTCGATGACTTGGATCTAGACCAAATTAGTGTGGATTATGTTCTTAACTGTGCTAGAAAAGGGCCACCTCCAAAAAGGGCACCACCACCTGTTTCTGCTTCCACACCTCCTCCTGTCTATACAGCTCCCGCAGTAGTTGCACCAACACCTATCCCCACACCGTCGCTAACCAAAACGAATGTATCTAGATCAGGGTCTTTGGAGTCCTCACAAGCTCGGGGACTGACTGGGTATGGCATTGAGGGTGCTGGGGGACGGCCTTTTGGTCGTCAGGAAGATTGA MEVDPVAYGQLAVTVGAARATAGQLGLGGGGLCSDHSFVVNRVFIPYRENAIEDLQRCRRDRQILLDFVLASGLIKKVVMPPGAVTLDDLDLDQISVDYVLNCARKGPPPKRAPPPVSASTPPPVYTAPAVVAPTPIPTPSLTKTNVSRSGSLESSQARGLTGYGIEGAGGRPFGRQED
BLAST of Cp4.1LG01g09780 vs. TrEMBL
Match: M5X6G1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa000533m1g PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22 Identity = 76/161 (47.20%), Postives = 91/161 (56.52%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. TrEMBL
Match: A0A0A0KWZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G625960 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.9e-22 Identity = 78/154 (50.65%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. TrEMBL
Match: B9RG72_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451940 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.5e-22 Identity = 70/159 (44.03%), Postives = 91/159 (57.23%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. TrEMBL
Match: V4T2T2_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10003518mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21 Identity = 72/159 (45.28%), Postives = 87/159 (54.72%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. TrEMBL
Match: K3ZQ73_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_028753mg PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 68/160 (42.50%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. TAIR10
Match: AT5G06970.1 (AT5G06970.1 Protein of unknown function (DUF810)) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18 Identity = 65/151 (43.05%), Postives = 80/151 (52.98%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. TAIR10
Match: AT4G11670.1 (AT4G11670.1 Protein of unknown function (DUF810)) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08 Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: gi|764628455|ref|XP_011469346.1| (PREDICTED: uncharacterized protein LOC101297291 [Fragaria vesca subsp. vesca]) HSP 1 Score: 119.8 bits (299), Expect = 4.9e-24 Identity = 78/166 (46.99%), Postives = 94/166 (56.63%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: gi|694366483|ref|XP_009361890.1| (PREDICTED: uncharacterized protein LOC103952085 [Pyrus x bretschneideri]) HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22 Identity = 75/160 (46.88%), Postives = 89/160 (55.62%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: gi|596047850|ref|XP_007220320.1| (hypothetical protein PRUPE_ppa000533m1g, partial [Prunus persica]) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 76/161 (47.20%), Postives = 91/161 (56.52%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: gi|659092342|ref|XP_008447022.1| (PREDICTED: uncharacterized protein LOC103489571 [Cucumis melo]) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-22 Identity = 78/154 (50.65%), Postives = 89/154 (57.79%), Query Frame = 1
BLAST of Cp4.1LG01g09780 vs. NCBI nr
Match: gi|700197159|gb|KGN52336.1| (hypothetical protein Csa_5G625960 [Cucumis sativus]) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-22 Identity = 78/154 (50.65%), Postives = 89/154 (57.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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