Carg05282 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05282
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Crossover junction endonuclease EME1B
Location	Cucurbita_argyrosperma_scaffold_010 : 905914 .. 911297 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAGCCGATTGTCCTCTCCGGAGAGGAGGACGGGGACTCTACACCTTACCCGATCCACTCCAAGAAACGTCGAACTGGATCGGATGCATTTTTGAGTATATTCTCCACTGTTATTGTGCTTGATGATGATCCGAGTACTCATAAATCAGGTCGTAACTCTCCGCCTCGAGTTATGACGTTGTAATTGTTAACTGTATGAAGGCGGCATTTGACTTTCTTGCTAAGGATTTGAATACGGACCAGAAGTTCGCTGGTTAGTGAATTTTATTCTCTTAATTGGTTCGTAGTAGTAGTTTATTATTGTTTCGGTTCGCCTCATGTGATGGATCAGTTAAATAATTTTCCTGCGCAGTAGTTTTGATCAAATAAGCTTTGTTGATGCTGGATAGGAATATTCTGAAATAGATTGGCACCGTTTGTTTGAATTGAACCCTCAGGAATCAGTGGATTGATATGCTTAGAGTTCGATAACGAGTCTGAAAGTGATTCTCAGAAGAATAAGTATGGGCACTGTGATTGGATTGATTCTGATCGTGATGATGTGAAAAACTCAGTACCGACTTCTAAATTTGACAGGGCAGGATCGGGTTCTTCTCTTGGTAGGTTCATGTTATCCTTGGTTTCCTTCCCTATTTTTGTCAGTTCCTGCATTTCTTACTGCGTGGAGAAAACAGAAGTGTGCTCATTTACGGAACTCCGCCATCCATGAAAACTGTGGACATTAATGGAAGTGTTTTGACAGGGAATGATGTTCTGCAGGAAATTTCTAGGGACACAAAGTATTCAAGTTTCGGGGGAGATGATGGTATTGATATGTATCAGGTGGATCCTTTCAAAGTAAGATCATAATATCTGTTTTCTTTCTGAAGATTGAATATAGATAGGGAGTAGTAATGGCTTCTAGATTTAGTTTTTAATGTAGCGTGGTGCATTATGAAGCATAGATACTAGATTGAGTACTACTTGCATGATAAGGTTTTTGTTTGTCAGTTTTCTCATCTCTCATCATTTGCGAAGGCGCTTGCATATTTGAAGTCATTTCTTAGCCCGCCTTCCATTGTTCCTTAGCTTGTTCTAAATCAGAATATTTACTGCAATACTACTGTAATGAAAAGTCTGTGATGCACGGCTAATACAGTGCAGTATAAGATTACACGCCCTATGTAATTTCAGAATCTTGCCCTATTTCAATGAAAGTTCTGTTTCATTTAAAAGAAAATATATTTATTACATGCTCTTTGCAATTTCAGTATCTTTGTCCTGGTTTTTCTTCATTAATTGTTGCTTGATAACTTGAAGTTGCGTGCTAGAGATTCTGTAATTTGTAACGTTTGAACTTTGTAGGGAACAGGAGAAGTACAAGAACTCAGAAAGCAATAACGGTTGAAAACGTCCACCTGTTGAGGAGGTTTGAATAACAACCATGAATGCTTAGGAGAATTAGGAAATGATTTTACCCTGCTTTCCCTAGCCAAGTTTTATACTTCAATGTTGCAGTATAAAATCTCTCATGTTCCTCACATGTTTCATCTAGAAATTGGCAAAACTGACCACTCACTTTGTCAAGGTACGTTCTAGGCAGTGTGTAGATGAAACTGAGGCAGCTGACATATTGACATGCAGTCTGGCATCCTTTCAATTCAGGTTCTGAATACTGTTCTCAAATTTCTATCAAGCATAACTTCTTGAAGTGTGAAAAGTTATTTTTCTGGATAACTTGGCGTCAATTGCAAATGTATAACTTAAATTTGTGTCGTGAAGTTTGGTCAAGTAGAAAGGATATTTCATATACTGTTCGTCGATCCCATAGACTGAACATTGTATGAAAAGAAGCCAAGAGATTCCTGTTTCGTACATCTTTAGATGTTGCATTAGTTCCATAGTTCTTTTGACATGGTACGTTAGTAAATATGGACTTAGCGATCACACCCATACACACACTCTTTCACATATTTAAATCCTTGGTCAGAATGATCTGTTTTCCTTTGCTTGTCTTGTAAAATTCAGGAAAAAGTTGACGCATCTATCCGTCAATGCAATTGGATCCATTATACCCAAAGATTGTGTTCGCAGGAATGTGATAAAGAAGTGCGTGAGGTGAGCTTTAATCGTCAATGGCCAATTCATTTCAAAATTTATTGGCATTCAGTTTCTTAATTACTCTGGCATTTACTTGATTTATATTAATGAATTTATGGCTGTAATTGAGTTACTCTCGAAGAACTCTTGTCTGTCACCAAACTGGCGGGTTAAAAGCTAACCAGAGCACTTGTCATGTATTTGATCTCAGCATCAGTCTCGTTTATGTCACAACAATATTCTAAACCATAAGAAACTATGAAACTAATATCTATCCTTCTTTGCATACCACCACTAAAATTATTATAGACCATGTGATACCACCACTAAAATTATTATATACCATGAAGTTAGTTCAATAGTTAAGGCGTTTCTACTTTTCCTAAGAGTTTATAGGTTTGAATTCTTTTATCCCAAATGTGATGATGTATTGAACTTAAAAAAGTTATATGGTACTGTCTCTGAAGTAAAACTTTATTGATTTTGTCATGTTTCTTTTTGTAATTAGGTTAGAAGCCTTGGTAGCAATTCTTATAATTAGCTTGGTTGGGATTGCAAATCAATATAAATGGAGTTGCTTTTTGTAATTAGGTTAGAAGTCTTGGTAGCAATTCCCAAGGTACAACCACGGTTTTCCGTAGCAATATGGAAGAAATATCCGACCATGAAATCTTTTTCGAAAGTGTACATGAATTCATGTAAATCTGTGAGTCTGAATCGAACAATTCACCTTATCCTCGATTGCATAAGCTAGCAGTCATGGCAGATCACATTTCTTCTTGGTCCACTCATGTAATAACAGGTGCATGAAAAGGAATTTCTGCTGAAAGACTTGACGACAGAAGGTTAGGAGAGATTTGTTCGAAGAGAGTGTACAGGATACTTATGGCTCAAAGTGGAAGCATGAGAACTGATGACGTTGAGGAGGGTGATGACTTGTTCAGATCCTAATTGTCTTAATTAATTATCATATCTAATTAGCACACCATTATTTTAATGCAATAGCTTATTGCAGAGTTTTCACCCTCGCAGACAGGTTGAAGGACTAGAGTGCCCTCATCTCTTTATCACAAATGCCACTTGGAGGCAGCGACTCGTGGAGCAAAGGGTAAATAAGTAAGTTTTCGTTGTTCAATATCCAAATCTGAATTCTCCCATCAACAAGGTAGAACTGTCCAAAATGAACTTCTTGGCTTACAATTAATTTTTCTTGCTTTTTAGTAGAGTAATTTCAACTAGGTGGGAAACCAGCATTTCACCTTGATGTTCAGTGACATAGTGTTGAACATATATATTGTGAGATCCACGATCCCACGTTGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTTTCCCTAGCTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGGCTTGGGTCGTTACATATATACCTCTTTCCTTATAATTTGTCCAAAGTGCATTACAATGTTAGGTTATAGAGACGAACGTATTGACTAATCGTTCCTTGTTCTTTTAACCGTAGTTAGAAGTGAATTGATCATCTATAGAAAGATTTCTATGTAAAGTGAACATAGTTTGATATGGTATCAGAATTCAAAGGGCTAATTGCTACTTTATATTGTGTGAGTTAGTTCAAGTTTGGCATTTTTTGGTGGGAGGTTTGGTTTGGTAGTAGTAACGGTATGGTTAGGTAGAAGTTTTGATATCCTAAAAGTAGGGAGAATATTGAATTATACCAAAAAAGAAGAGACTCAAGGATGATATCAGTAATGACAACAATTTGGTGGTACTATTTTTTCTCATCCCCACCCTGCTTCCTCATATTCCAATTTTATGTGGTTCGAAATCCATCAGAAGCATTGCATTCAAACAAGTGGATTGCTCCCTTTGTAGGGTTTGTGTAATTTCCAACAGAGAGCCAAAATTTTGATGATTGTGACCCAAATCCAATTAAATTATGGTTGGGCATGGCCATTCCTCTAATCCAATTCACACTCATCCTAATTCCACCACACAAAACACCCACTAATGGGTGCGTGCTGCCACCAGCTCGCACCACTTTGTTTTTTGAATGCCTCTTTCATCCAAGGAAATCTTACCTGAATGTATAATTGATCTCTTTTAAAGTTCATGAATTATTTTTGGACAAAGGTAGAAATGGGATTGGAAGTTTTTAATACTAAAGAAGATCTAGATTAATTGATTTACCGGTTCAATCATTAGTTAATTATGTTTTTATATTGTTTTGGATTAGGTAATTGTTGCATCTTTCATAGAAGATCTGATCTCTAGACATTAGAATATAGGAAATTAAAATTCACGTTCGCAATACTCATTTTGGCACTTTCGCAAAGTGATAAGACAAGTAGAAATAGGTTAAAATATCATTTTGGTCTTTGTATCTTATACTTCATTTCACGATAAGCTTAAAATTAGACTTTACTGCCAATTTGAAGTTAAATTTTATCAAAATTAGTCAAATAATAACAATAATTTTAATGCAGTAAAAGACAATATAAACATATTTCTAAAGTATGTAGAGAAAAGCTGGTAGAGACAAAAACAAAAAACATAAGTAACCAATAGTAGGGACCAATTTAAAAGCTTAAAAGTAAATTAACTAAAATTGAATATAAAATGAAATAGCTAATATATAATGAATATATAATGAAACTCAGAAAGACTAAAATGATATTTTAACCGAACAAACATGATGTAAAATATATTTGATCAAATGTAATAGTAAAAAATTGATAAAAATTAATCACATAAGAAAGTAAGAGCACAATGCTTATATAATTAATAATTACTCTTGTCACAATTTGAGATGATGTGACATAAAACAATGACTTCTGTTCTTTATTGGTCCTCATTTCACTATCCAAATGGTAAAATGTAAGACTATCATATGAACGAATAATATCTACTGATAAAGAATACAAGGATAGTTCCTAATGTATCCTTTTAAATGACTTATACCCACATAAAGGCTGTTCTAGTAGCATATATAAGAGAGCAGACATACTTATGAAACATATCCAAAGTTTGTAATGATGGAAAGAAGCAAATCATTTTGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAAAACCAAATCATACAGCTTCAATGGGACAATGAACAAAGAAGATGAGGGCAATCCAGAGCTCAAGAGAAAGCAAAGAGTAGCTACTTACAATATGTATTCCCTGGAAGGTAAGCTGAAGAAGTCCTTGAGAAAAAGCTTCAAGTAG

mRNA sequence

ATGTCCCAGCCGATTGTCCTCTCCGGAGAGGAGGACGGGGACTCTACACCTTACCCGATCCACTCCAAGAAACGTCGAACTGGATCGGATGCATTTTTGAGTATATTCTCCACTGCGGCATTTGACTTTCTTGCTAAGGATTTGAATACGGACCAGAAGTTCGCTGGAATCAGTGGATTGATATGCTTAGAGTTCGATAACGAGTCTGAAAGTGATTCTCAGAAGAATAAGTATGGGCACTGTGATTGGATTGATTCTGATCGTGATGATGTGAAAAACTCATTCCTGCATTTCTTACTGCGTGGAGAAAACAGAAGTGTGCTCATTTACGGAACTCCGCCATCCATGAAAACTGTGGACATTAATGGAAGTGTTTTGACAGGGAATGATGTTCTGCAGGAAATTTCTAGGGACACAAAGTATTCAAGTTTCGGGGGAGATGATGGTATTGATATGTATCAGGTGGATCCTTTCAAAAAATTGGCAAAACTGACCACTCACTTTGTCAAGGTACGTTCTAGGCAGTGTGTAGATGAAACTGAGGCAGCTGACATATTGACATGCAGTCTGGCATCCTTTCAATTCAGGAAAAAGTTGACGCATCTATCCGTCAATGCAATTGGATCCATTATACCCAAAGATTGTGTTCGCAGGAATGTGATAAAGAAGTGCGTGAGGTTAGAAGTCTTGGTAGCAATTCCCAAGGTACAACCACGGTTTTCCGTAGCAATATGGAAGAAATATCCGACCATGAAATCTTTTTCGAAAGTGTACATGAATTCATGTAAATCTGTGCATGAAAAGGAATTTCTGCTGAAAGACTTGACGACAGAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAAAACCAAATCATACAGCTTCAATGGGACAATGAACAAAGAAGATGAGGGCAATCCAGAGCTCAAGAGAAAGCAAAGAGTAGCTACTTACAATATGTATTCCCTGGAAGGTAAGCTGAAGAAGTCCTTGAGAAAAAGCTTCAAGTAG

Coding sequence (CDS)

ATGTCCCAGCCGATTGTCCTCTCCGGAGAGGAGGACGGGGACTCTACACCTTACCCGATCCACTCCAAGAAACGTCGAACTGGATCGGATGCATTTTTGAGTATATTCTCCACTGCGGCATTTGACTTTCTTGCTAAGGATTTGAATACGGACCAGAAGTTCGCTGGAATCAGTGGATTGATATGCTTAGAGTTCGATAACGAGTCTGAAAGTGATTCTCAGAAGAATAAGTATGGGCACTGTGATTGGATTGATTCTGATCGTGATGATGTGAAAAACTCATTCCTGCATTTCTTACTGCGTGGAGAAAACAGAAGTGTGCTCATTTACGGAACTCCGCCATCCATGAAAACTGTGGACATTAATGGAAGTGTTTTGACAGGGAATGATGTTCTGCAGGAAATTTCTAGGGACACAAAGTATTCAAGTTTCGGGGGAGATGATGGTATTGATATGTATCAGGTGGATCCTTTCAAAAAATTGGCAAAACTGACCACTCACTTTGTCAAGGTACGTTCTAGGCAGTGTGTAGATGAAACTGAGGCAGCTGACATATTGACATGCAGTCTGGCATCCTTTCAATTCAGGAAAAAGTTGACGCATCTATCCGTCAATGCAATTGGATCCATTATACCCAAAGATTGTGTTCGCAGGAATGTGATAAAGAAGTGCGTGAGGTTAGAAGTCTTGGTAGCAATTCCCAAGGTACAACCACGGTTTTCCGTAGCAATATGGAAGAAATATCCGACCATGAAATCTTTTTCGAAAGTGTACATGAATTCATGTAAATCTGTGCATGAAAAGGAATTTCTGCTGAAAGACTTGACGACAGAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAAAACCAAATCATACAGCTTCAATGGGACAATGAACAAAGAAGATGAGGGCAATCCAGAGCTCAAGAGAAAGCAAAGAGTAGCTACTTACAATATGTATTCCCTGGAAGGTAAGCTGAAGAAGTCCTTGAGAAAAAGCTTCAAGTAG

Protein sequence

MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFSTAAFDFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKYGHCDWIDSDRDDVKNSFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEISRDTKYSSFGGDDGIDMYQVDPFKKLAKLTTHFVKVRSRQCVDETEAADILTCSLASFQFRKKLTHLSVNAIGSIIPKDCVRRNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTTEAYGDVRFGFEDKTKSYSFNGTMNKEDEGNPELKRKQRVATYNMYSLEGKLKKSLRKSFK

Homology

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BLAST of Carg05282 vs. NCBI nr
Match: XP_022977604.1 (crossover junction endonuclease EME1B isoform X3 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 196/578 (33.91%), Postives = 224/578 (38.75%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST------------------AAF- 60
           MS+PIVLS EED  STP PI SKKRRT S AF SI ST                  A+F 
Sbjct: 1   MSRPIVLSDEEDRYSTPLPIPSKKRRTESHAFPSIKSTVLVLDDDPTPQKSGSNSAASFV 60

Query: 61  -----------------------DFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                                  D  A+DLN+D KFAGISGLICLE DNESESDS K   
Sbjct: 61  PETPLSPPPSSDVVIVKCTKVPLDLPARDLNSDHKFAGISGLICLESDNESESDSLKKMC 120

Query: 121 GHCDWIDSDRDDVKNSFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEISRD 180
           G  +WI SD DD+KN        G        G+ PS+           GND L EIS D
Sbjct: 121 GPSEWIGSDCDDMKN-------LGSTSKFDSAGSGPSI-----------GNDDLHEISGD 180

Query: 181 TKYSSFGGDD-------------------------------------------------- 240
           TK+S+ G DD                                                  
Sbjct: 181 TKHSTVGRDDYIYQENVGMEQNDNTIKPTGRKSDAEKNKNVDKAMRKKATKDDKIRLMEX 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALKSIVAEIDAKVVELGSVGGHL 300

Query: 301 -------------------------------------GID------MYQVDPF------- 315
                                                G++      MY+ + F       
Sbjct: 301 LTRFAEKGITFRIKSNPIERSIVWTMNAPEHISESFKGLEIAYVLLMYEAENFCELLSKE 360

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BLAST of Carg05282 vs. NCBI nr
Match: XP_022977603.1 (crossover junction endonuclease EME1B isoform X2 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 4.1e-52
Identity = 196/582 (33.68%), Postives = 224/582 (38.49%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST------------------AAF- 60
           MS+PIVLS EED  STP PI SKKRRT S AF SI ST                  A+F 
Sbjct: 1   MSRPIVLSDEEDRYSTPLPIPSKKRRTESHAFPSIKSTVLVLDDDPTPQKSGSNSAASFV 60

Query: 61  -----------------------DFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                                  D  A+DLN+D KFAGISGLICLE DNESESDS K   
Sbjct: 61  PETPLSPPPSSDVVIVKCTKVPLDLPARDLNSDHKFAGISGLICLESDNESESDSLKKMC 120

Query: 121 GHCDWIDSDRDDVKNSFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEISRD 180
           G  +WI SD DD+KN        G        G+ PS+           GND L EIS D
Sbjct: 121 GPSEWIGSDCDDMKN-------LGSTSKFDSAGSGPSI-----------GNDDLHEISGD 180

Query: 181 TKYSSFGGDD-------------------------------------------------- 240
           TK+S+ G DD                                                  
Sbjct: 181 TKHSTVGRDDYIYQVHDYPEKENVGMEQNDNTIKPTGRKSDAEKNKNVDKAMRKKATKDD 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 KIRLMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALKSIVAEIDAKVVEL 300

Query: 301 -----------------------------------------GID------MYQVDPF--- 315
                                                    G++      MY+ + F   
Sbjct: 301 GSVGGHLLTRFAEKGITFRIKSNPIERSIVWTMNAPEHISEGLEIAYVLLMYEAENFCEL 360

[Close]

BLAST of Carg05282 vs. NCBI nr
Match: XP_022977602.1 (crossover junction endonuclease EME1B isoform X1 [Cucurbita maxima])

HSP 1 Score: 213.8 bits (543), Expect = 9.2e-52
Identity = 196/585 (33.50%), Postives = 224/585 (38.29%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST------------------AAF- 60
           MS+PIVLS EED  STP PI SKKRRT S AF SI ST                  A+F 
Sbjct: 1   MSRPIVLSDEEDRYSTPLPIPSKKRRTESHAFPSIKSTVLVLDDDPTPQKSGSNSAASFV 60

Query: 61  -----------------------DFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                                  D  A+DLN+D KFAGISGLICLE DNESESDS K   
Sbjct: 61  PETPLSPPPSSDVVIVKCTKVPLDLPARDLNSDHKFAGISGLICLESDNESESDSLKKMC 120

Query: 121 GHCDWIDSDRDDVKNSFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEISRD 180
           G  +WI SD DD+KN        G        G+ PS+           GND L EIS D
Sbjct: 121 GPSEWIGSDCDDMKN-------LGSTSKFDSAGSGPSI-----------GNDDLHEISGD 180

Query: 181 TKYSSFGGDD-------------------------------------------------- 240
           TK+S+ G DD                                                  
Sbjct: 181 TKHSTVGRDDYIYQVHDYPEKENVGMEQNDNTIKPTGRKSDAEKNKNVDKAMRKKATKDD 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 KIRLMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALKSIVAEIDAKVVEL 300

Query: 301 --------------------------------------------GID------MYQVDPF 315
                                                       G++      MY+ + F
Sbjct: 301 GSVGGHLLTRFAEKGITFRIKSNPIERSIVWTMNAPEHISESFKGLEIAYVLLMYEAENF 360

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BLAST of Carg05282 vs. NCBI nr
Match: XP_008440091.1 (PREDICTED: crossover junction endonuclease EME1B isoform X2 [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51
Identity = 186/547 (34.00%), Postives = 206/547 (37.66%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST---------------------- 60
           MSQPIVLS EED  STP PI SKKRRT SD   SI ST                      
Sbjct: 1   MSQPIVLSDEEDRYSTPIPIPSKKRRTESDLLPSIKSTVLVLDDDPTPQKSNHNSAASFV 60

Query: 61  --------------------AAFDFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                               A  +  A+DLN+DQKFAGISGLICLE DNESESDSQK K 
Sbjct: 61  PETPLSPQLSSDVAIVKCTKAGLNLHARDLNSDQKFAGISGLICLESDNESESDSQKRKC 120

Query: 121 GHCDWIDSDRDDVKN--SFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEIS 180
              +WI SD  ++KN  + L F   G   S                     GND LQEIS
Sbjct: 121 EQSEWIGSDCYEMKNIGASLPFDSAGSGSS--------------------HGNDDLQEIS 180

Query: 181 RDTKYSSFGGDDGIDMYQVDPF-------------------------------------- 240
            DTK+S+FG D   D+YQV  +                                      
Sbjct: 181 GDTKHSAFGRDG--DIYQVHDYPEKDNVGMEQNDNSIKTTGRKANAEKVMRKKATKDDKI 240

Query: 241 ------------------------------------------------------------ 285
                                                                       
Sbjct: 241 RLMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLALKSIVAEIDAKVVELGS 300

[Close]

BLAST of Carg05282 vs. NCBI nr
Match: XP_008440090.1 (PREDICTED: crossover junction endonuclease EME1B isoform X1 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 3.5e-51
Identity = 194/583 (33.28%), Postives = 219/583 (37.56%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST---------------------- 60
           MSQPIVLS EED  STP PI SKKRRT SD   SI ST                      
Sbjct: 1   MSQPIVLSDEEDRYSTPIPIPSKKRRTESDLLPSIKSTVLVLDDDPTPQKSNHNSAASFV 60

Query: 61  --------------------AAFDFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                               A  +  A+DLN+DQKFAGISGLICLE DNESESDSQK K 
Sbjct: 61  PETPLSPQLSSDVAIVKCTKAGLNLHARDLNSDQKFAGISGLICLESDNESESDSQKRKC 120

Query: 121 GHCDWIDSDRDDVKN--SFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEIS 180
              +WI SD  ++KN  + L F   G   S                     GND LQEIS
Sbjct: 121 EQSEWIGSDCYEMKNIGASLPFDSAGSGSS--------------------HGNDDLQEIS 180

Query: 181 RDTKYSSFGGDDGIDMYQVDPF-------------------------------------- 240
            DTK+S+FG D   D+YQV  +                                      
Sbjct: 181 GDTKHSAFGRDG--DIYQVHDYPEKDNVGMEQNDNSIKTTGRKANAEKVMRKKATKDDKI 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLALKSIVAEIDAKVVELGS 300

Query: 301 ------------------------------------------------------------ 315
                                                                       
Sbjct: 301 IGGHLLTRFAEKGITFRIKSNPIERSILWTMNVPEHISASSKGLEISYVLLVYEAENFCE 360

[Close]

BLAST of Carg05282 vs. TAIR10
Match: AT2G22140.1 (essential meiotic endonuclease 1B)

HSP 1 Score: 156.0 bits (393), Expect = 4.1e-38
Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           LAKLTTH+VKV SR CVDE E A+    LT SLAS QFRKKLT LSV+A G+++ KD V 
Sbjct: 384 LAKLTTHYVKVHSRHCVDEAEVAEHIVGLTSSLASCQFRKKLTMLSVSANGALVSKDSVD 443

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 280
           +++IKK   L+ LVAIPKVQPR+++A+WKKYP+MKS  KVYM+  KSVHEKEFLLKDL  
Sbjct: 444 KHLIKKSPWLKALVAIPKVQPRYALAVWKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKV 503

Query: 281 EAY--GDVRFGFEDKTKSY----SFNGTMNKEDEGN 308
           E    GD+R G     + Y    S +G +  +D  N
Sbjct: 504 EGLVGGDIRLGEICSKRIYRVLMSHDGAIKTDDVEN 539

[Close]

BLAST of Carg05282 vs. TAIR10
Match: AT2G21800.2 (essential meiotic endonuclease 1A)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-30
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAAD---ILTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           +AKL+TH++ V SR CVDE E AD    LT SLA  Q RKKLT LSV A G+++ K+   
Sbjct: 381 IAKLSTHYIGVHSRHCVDEAEVADHVVRLTSSLAHCQVRKKLTRLSVYADGTLMSKNAAD 440

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 280
           +++I++ + L+VLVAIPKVQPR+++A+ KKYP++KS  KVYM+   SVHEKEFLLKDL  
Sbjct: 441 KHLIRESIWLKVLVAIPKVQPRYAIAVSKKYPSLKSLLKVYMDPNISVHEKEFLLKDLKV 500

Query: 281 E--AYGDVRFGFEDKTKSY----SFNGTMNKEDEGN 308
           E     D   G     + Y    S +GT+  +D  N
Sbjct: 501 ENLVGRDTSVGEACSKRIYRVLMSLDGTIKTDDVEN 536

[Close]

BLAST of Carg05282 vs. TAIR10
Match: AT4G09890.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 277 TEAYGDVRFGF-EDKTKSYSFNGTMNKEDEGNPELKRKQRVATYNMYSLEGKLKKSLRKS 336
           + ++    FG+ ++++ SY+FNG     D   PE+KRK+RVA+YN+++ E KLK +L+ S
Sbjct: 12  SSSFSTDEFGYDQNRSNSYNFNGPCINTD---PEMKRKKRVASYNLFATEEKLKSTLKNS 70

Query: 337 FK 338
           FK
Sbjct: 72  FK 70

[Close]

BLAST of Carg05282 vs. TAIR10
Match: AT3G05725.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 295 SFNGTMNKEDEGNPELKRKQRVATYNMYSLEGKLKKSLRKSFK 338
           S + T+ K    +PE+KRK+RVA Y +YS EGK+K +LRKS+K
Sbjct: 69  SSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYK 111

[Close]

BLAST of Carg05282 vs. TAIR10
Match: AT5G11970.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 42.0 bits (97), Expect = 8.7e-04
Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 307 NPELKRKQRVATYNMYSLEGKLKKSLRKSFK 338
           +PEL+RK+RVA+Y MY +EGK+K S R SF+
Sbjct: 61  DPELQRKKRVASYKMYGVEGKVKGSFRNSFR 91

[Close]

BLAST of Carg05282 vs. Swiss-Prot
Match: sp|C5H8J1|EME1B_ARATH (Crossover junction endonuclease EME1B OS=Arabidopsis thaliana OX=3702 GN=EME1B PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.4e-37
Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           LAKLTTH+VKV SR CVDE E A+    LT SLAS QFRKKLT LSV+A G+++ KD V 
Sbjct: 384 LAKLTTHYVKVHSRHCVDEAEVAEHIVGLTSSLASCQFRKKLTMLSVSANGALVSKDSVD 443

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 280
           +++IKK   L+ LVAIPKVQPR+++A+WKKYP+MKS  KVYM+  KSVHEKEFLLKDL  
Sbjct: 444 KHLIKKSPWLKALVAIPKVQPRYALAVWKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKV 503

Query: 281 EAY--GDVRFGFEDKTKSY----SFNGTMNKEDEGN 308
           E    GD+R G     + Y    S +G +  +D  N
Sbjct: 504 EGLVGGDIRLGEICSKRIYRVLMSHDGAIKTDDVEN 539

[Close]

BLAST of Carg05282 vs. Swiss-Prot
Match: sp|Q84M98|EME1A_ARATH (Crossover junction endonuclease EME1A OS=Arabidopsis thaliana OX=3702 GN=EME1A PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.3e-29
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAAD---ILTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           +AKL+TH++ V SR CVDE E AD    LT SLA  Q RKKLT LSV A G+++ K+   
Sbjct: 378 IAKLSTHYIGVHSRHCVDEAEVADHVVRLTSSLAHCQVRKKLTRLSVYADGTLMSKNAAD 437

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 280
           +++I++ + L+VLVAIPKVQPR+++A+ KKYP++KS  KVYM+   SVHEKEFLLKDL  
Sbjct: 438 KHLIRESIWLKVLVAIPKVQPRYAIAVSKKYPSLKSLLKVYMDPNISVHEKEFLLKDLKV 497

Query: 281 E--AYGDVRFGFEDKTKSY----SFNGTMNKEDEGN 308
           E     D   G     + Y    S +GT+  +D  N
Sbjct: 498 ENLVGRDTSVGEACSKRIYRVLMSLDGTIKTDDVEN 533

[Close]

BLAST of Carg05282 vs. Swiss-Prot
Match: sp|Q0J9J6|EME1_ORYSJ (Crossover junction endonuclease EME1 OS=Oryza sativa subsp. japonica OX=39947 GN=EME1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-25
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           L KL TH+ +VRSR C DE E  +    LT SLA+ +FRK LT LSV+A GS I K CV 
Sbjct: 492 LCKLATHYARVRSRHCTDEAEVTEHIVGLTYSLANCKFRKPLTWLSVHANGSNISKGCVD 551

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 279
           ++ IKK   L+ LVAIP V P  ++AI KKYP+M+S   VYM+  KSVHEKE LL+DL  
Sbjct: 552 KDRIKKSAWLKSLVAIPGVSPGQAIAIEKKYPSMRSLLNVYMDDSKSVHEKEHLLEDLRL 611

[Close]

BLAST of Carg05282 vs. TrEMBL
Match: tr|A0A1S3AZW5|A0A1S3AZW5_CUCME (crossover junction endonuclease EME1B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484673 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.9e-52
Identity = 186/547 (34.00%), Postives = 206/547 (37.66%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST---------------------- 60
           MSQPIVLS EED  STP PI SKKRRT SD   SI ST                      
Sbjct: 1   MSQPIVLSDEEDRYSTPIPIPSKKRRTESDLLPSIKSTVLVLDDDPTPQKSNHNSAASFV 60

Query: 61  --------------------AAFDFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                               A  +  A+DLN+DQKFAGISGLICLE DNESESDSQK K 
Sbjct: 61  PETPLSPQLSSDVAIVKCTKAGLNLHARDLNSDQKFAGISGLICLESDNESESDSQKRKC 120

Query: 121 GHCDWIDSDRDDVKN--SFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEIS 180
              +WI SD  ++KN  + L F   G   S                     GND LQEIS
Sbjct: 121 EQSEWIGSDCYEMKNIGASLPFDSAGSGSS--------------------HGNDDLQEIS 180

Query: 181 RDTKYSSFGGDDGIDMYQVDPF-------------------------------------- 240
            DTK+S+FG D   D+YQV  +                                      
Sbjct: 181 GDTKHSAFGRDG--DIYQVHDYPEKDNVGMEQNDNSIKTTGRKANAEKVMRKKATKDDKI 240

Query: 241 ------------------------------------------------------------ 285
                                                                       
Sbjct: 241 RLMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLALKSIVAEIDAKVVELGS 300

[Close]

BLAST of Carg05282 vs. TrEMBL
Match: tr|A0A1S3B119|A0A1S3B119_CUCME (crossover junction endonuclease EME1B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484673 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51
Identity = 194/583 (33.28%), Postives = 219/583 (37.56%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST---------------------- 60
           MSQPIVLS EED  STP PI SKKRRT SD   SI ST                      
Sbjct: 1   MSQPIVLSDEEDRYSTPIPIPSKKRRTESDLLPSIKSTVLVLDDDPTPQKSNHNSAASFV 60

Query: 61  --------------------AAFDFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                               A  +  A+DLN+DQKFAGISGLICLE DNESESDSQK K 
Sbjct: 61  PETPLSPQLSSDVAIVKCTKAGLNLHARDLNSDQKFAGISGLICLESDNESESDSQKRKC 120

Query: 121 GHCDWIDSDRDDVKN--SFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEIS 180
              +WI SD  ++KN  + L F   G   S                     GND LQEIS
Sbjct: 121 EQSEWIGSDCYEMKNIGASLPFDSAGSGSS--------------------HGNDDLQEIS 180

Query: 181 RDTKYSSFGGDDGIDMYQVDPF-------------------------------------- 240
            DTK+S+FG D   D+YQV  +                                      
Sbjct: 181 GDTKHSAFGRDG--DIYQVHDYPEKDNVGMEQNDNSIKTTGRKANAEKVMRKKATKDDKI 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLALKSIVAEIDAKVVELGS 300

Query: 301 ------------------------------------------------------------ 315
                                                                       
Sbjct: 301 IGGHLLTRFAEKGITFRIKSNPIERSILWTMNVPEHISASSKGLEISYVLLVYEAENFCE 360

[Close]

BLAST of Carg05282 vs. TrEMBL
Match: tr|A0A0A0KHY1|A0A0A0KHY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486820 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 192/583 (32.93%), Postives = 218/583 (37.39%), Query Frame = 0


Query: 1   MSQPIVLSGEEDGDSTPYPIHSKKRRTGSDAFLSIFST---------------------- 60
           MSQPI+LS EED  STP PI SKKRRT SD   +I ST                      
Sbjct: 1   MSQPIILSDEEDRYSTPIPIPSKKRRTESDLLPNIKSTVLVLDDDPTPQKSNHNSAASFV 60

Query: 61  --------------------AAFDFLAKDLNTDQKFAGISGLICLEFDNESESDSQKNKY 120
                               A  +  A+DLN+DQKFAGISGLICLE DNESESDSQK K 
Sbjct: 61  PETPLSPQPSSDVAIVKCTKAGLNLHARDLNSDQKFAGISGLICLESDNESESDSQKKKC 120

Query: 121 GHCDWIDSDRDDVKN--SFLHFLLRGENRSVLIYGTPPSMKTVDINGSVLTGNDVLQEIS 180
              +WI SD  ++KN  + L F   G   S+                    GND LQEIS
Sbjct: 121 EQSEWIGSDCYEMKNIGASLPFDSAGSGSSL--------------------GNDDLQEIS 180

Query: 181 RDTKYSSFGGDDGIDMYQVDPF-------------------------------------- 240
            D K+S+FG DD  D+YQV  +                                      
Sbjct: 181 GDMKHSTFGRDD--DIYQVHDYPEEDNVGMEQNDNSMKTTGRKANAEKVTRKKATKDDKI 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLALKSIVAEIDAKVVELGS 300

Query: 301 ------------------------------------------------------------ 315
                                                                       
Sbjct: 301 IGGHLLTRFAEKGITFRIKSNPIERSILWTMNVPEHISASSKGLEISYVLLVYEAENFCE 360

[Close]

BLAST of Carg05282 vs. TrEMBL
Match: tr|D7SW92|D7SW92_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g01900 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.0e-40
Identity = 89/121 (73.55%), Postives = 101/121 (83.47%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           L+KLTTHF++V SRQC+DE E A+    LTCSLAS QFRKKLT LSVNA GS+IPKD   
Sbjct: 278 LSKLTTHFLRVHSRQCIDEAELAEHVVGLTCSLASCQFRKKLTRLSVNANGSLIPKDSTD 337

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 279
           RN+IKK V L+ LVAIPKVQPRF++AIWKKYPTMKS  +VYM+  KSVHEKEFLLKDLTT
Sbjct: 338 RNLIKKSVWLKALVAIPKVQPRFAIAIWKKYPTMKSLLRVYMDPSKSVHEKEFLLKDLTT 397

[Close]

BLAST of Carg05282 vs. TrEMBL
Match: tr|A0A022Q7Y4|A0A022Q7Y4_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a019811mg PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.0e-39
Identity = 89/122 (72.95%), Postives = 101/122 (82.79%), Query Frame = 0


Query: 161 LAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFRKKLTHLSVNAIGSIIPKDCVR 220
           L KL THF KVRSR CVDE+E A+    LTCSLAS QFR+KLT LSVNA GS IPKDC+ 
Sbjct: 262 LTKLATHFSKVRSRLCVDESELAEHVVGLTCSLASCQFRRKLTRLSVNANGSAIPKDCID 321

Query: 221 RNVIKKCVRLEVLVAIPKVQPRFSVAIWKKYPTMKSFSKVYMNSCKSVHEKEFLLKDLTT 280
           +N+IKK + L+ LVAIPKVQPRF++AIWKKYPTMKS   VYM+S KSVHEKEFLLKDL+T
Sbjct: 322 KNLIKKNLWLKALVAIPKVQPRFAIAIWKKYPTMKSLLSVYMDSTKSVHEKEFLLKDLST 381

The following BLAST results are available for this feature:

BLAST of Carg05282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977604.1	1.4e-52	33.91	crossover junction endonuclease EME1B isoform X3 [Cucurbita maxima]	[more]
XP_022977603.1	4.1e-52	33.68	crossover junction endonuclease EME1B isoform X2 [Cucurbita maxima]	[more]
XP_022977602.1	9.2e-52	33.50	crossover junction endonuclease EME1B isoform X1 [Cucurbita maxima]	[more]
XP_008440091.1	1.2e-51	34.00	PREDICTED: crossover junction endonuclease EME1B isoform X2 [Cucumis melo]	[more]
XP_008440090.1	3.5e-51	33.28	PREDICTED: crossover junction endonuclease EME1B isoform X1 [Cucumis melo]	[more]

BLAST of Carg05282 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22140.1	4.1e-38	57.05	essential meiotic endonuclease 1B	[more]
AT2G21800.2	1.9e-30	49.36	essential meiotic endonuclease 1A	[more]
AT4G09890.1	3.2e-06	41.94	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	2.3e-04	53.49	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	8.7e-04	61.29	Protein of unknown function (DUF3511)	[more]

BLAST of Carg05282 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|C5H8J1\|EME1B_ARATH	7.4e-37	57.05	Crossover junction endonuclease EME1B OS=Arabidopsis thaliana OX=3702 GN=EME1B P...	[more]
sp\|Q84M98\|EME1A_ARATH	3.3e-29	49.36	Crossover junction endonuclease EME1A OS=Arabidopsis thaliana OX=3702 GN=EME1A P...	[more]
sp\|Q0J9J6\|EME1_ORYSJ	1.7e-25	55.37	Crossover junction endonuclease EME1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Carg05282 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZW5\|A0A1S3AZW5_CUCME	7.9e-52	34.00	crossover junction endonuclease EME1B isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S3B119\|A0A1S3B119_CUCME	2.3e-51	33.28	crossover junction endonuclease EME1B isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0KHY1\|A0A0A0KHY1_CUCSA	1.1e-50	32.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486820 PE=4 SV=1	[more]
tr\|D7SW92\|D7SW92_VITVI	7.0e-40	73.55	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g01900 PE=4 SV=...	[more]
tr\|A0A022Q7Y4\|A0A022Q7Y4_ERYGU	2.0e-39	72.95	Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0048476	Holliday junction resolvase complex

Vocabulary: **INTERPRO**
Term	Definition
IPR033310	Mms4/EME1/EME2
IPR021899	DUF3511

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0048476	Holliday junction resolvase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004518	nuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05282-RA	Carg05282-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 307..337 e-value: 3.7E-14 score: 52.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR21077:SF5	METHYL METHANESULFONATE SENSITIVITY 4 ORTHOLOG	coord: 160..278
IPR033310	Mms4/EME1/EME2	PANTHER	PTHR21077	EME1 PROTEIN	coord: 160..278

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05282	Cla008475	Watermelon (97103) v1	carwmB0803
Carg05282	Csa6G486820	Cucumber (Chinese Long) v2	carcuB0826
Carg05282	MELO3C007452	Melon (DHL92) v3.5.1	carmeB0807
Carg05282	ClCG01G015860	Watermelon (Charleston Gray)	carwcgB0778
Carg05282	CSPI06G27000	Wild cucumber (PI 183967)	carcpiB0846
Carg05282	Cucsa.101390	Cucumber (Gy14) v1	carcgyB0918
Carg05282	CmaCh07G007730	Cucurbita maxima (Rimu)	carcmaB1130
Carg05282	CmaCh03G010560	Cucurbita maxima (Rimu)	carcmaB1125
Carg05282	CmoCh07G007950	Cucurbita moschata (Rifu)	carcmoB1100
Carg05282	CmoCh03G010530	Cucurbita moschata (Rifu)	carcmoB1095
Carg05282	Lsi01G011080	Bottle gourd (USVL1VR-Ls)	carlsiB742
Carg05282	Cp4.1LG10g03340	Cucurbita pepo (Zucchini)	carcpeB1128
Carg05282	Cp4.1LG19g11920	Cucurbita pepo (Zucchini)	carcpeB1135
Carg05282	CsGy6G026350	Cucumber (Gy14) v2	carcgybB0799
Carg05282	MELO3C007452.2	Melon (DHL92) v3.6.1	carmedB0818
Carg05282	CsaV3_6G042140	Cucumber (Chinese Long) v3	carcucB0849
Carg05282	Cla97C01G014840	Watermelon (97103) v2	carwmbB0839
Carg05282	Bhi03G001092	Wax gourd	carwgoB0947

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05282	Carg10570	Silver-seed gourd	carcarB280

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05282	Cucurbita pepo (Zucchini)	carcpeB1132
Carg05282	Watermelon (Charleston Gray)	carwcgB0785