CmoCh07G007950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G007950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	essential meiotic endonuclease 1B
Location	Cmo_Chr07 : 3639776 .. 3643120 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTTCTGTTTCATTTAGAAGAAAATATATTTATTACATGCTCTTTGCAATTTCAGTATCTTTGTCCTGGTTTTTCTTCATTAATTGTTGCTTGATAACTTGAAGTTGCGTGCTAGAGATTCTGTAATTTTTAACGTTTGAACTTTGTAGGGAACAGGAGAAGTACAAGAACTCAGAAAGCAATAACGGTTGAAAACGTCCACCTGTTGAGGAGGTTTGAATAACAATCATGAATGCTTAGGAGAATTAGGAAATGATTTTACCCTGCTTTCCCTAGCCAAGTTTTATACTTCAATGTTGCAGTATAAAATCTCTCATGTTCCTCACATGTTTCATCTAGAAATTGGCAAAACTGACCACTCACTTTGTCAAGGTACGTTCTAGGCAGTGTGTAGATGAAACTGAGGCAGCTGACATATTGACATGCAGTCTGGCATCCTTTCAATTCAGGTTCTGAATACTGTTCTCAAATTTCTATCAAGCATAACTTCTTGAAGTGTGAAAAGTTATTTTTCTGGATAACTTGGCGTCAATTGCAAATGTATAACTTAAATTTGTGTCGTGAAGTTTGGTCAAGTAGAAAGGATATTTCATATACTGTTCGTCGATCCCATAGACTGAACATTGTATGAAAAGAAGCCAAGAGATTCCTGTTTCGTACATCTTTAGATGTTGCATTAGTTCCATAGTTTTTTTGACATGGTACGTTAGTAAATATGGACTTAGGCGATCACACCCATATACACACTCTTTCACATATTTAAATCCTTAGTCAGAATTATCTATTTTCCTTTGCTTGTCTTGTAAAATTGAGGAAAAAGTTGACGCATCTATCCGTCAATGCAATTGGATCCATTATACCCAAAGATTGTGTTCACAGGAATGTGATAGAGAAGTGCGTGAGGTGAGCTTTAATCGTCAATGGCCAATTCATTTCAAAATTTATTGGCATTCGGTTTCTTAATTACTCTGGCATTTACTTGATTTATATTAATGAATTTATGGCTGTAATTGAGTTACTCTCGAAGAACTCTTGTCTGTCACCAAACTGGCGGGTTAAAAGCTAAACAGAGCACTTGTCATGTATTTGATCTCAGCATCAGTCTCGTTTATGTCACAACAATATTCTAAACCATAAGAAACTATGAAACTAATATCTATCCTTCTTTGCTTTTTTGTACTTAATTACCCTTGTTGATAGATAACTGTAAGACTTTTAGTAATAAAATCATGTTATACCACCACTAAAATTATTATATACCATGTTATACCACCACTAAAATTATTATATACCATGAACTTAGTTCAATAGTTAAGGCGTTTCTACTTTTCCTAAGAGGTTATATGTTTGACTTCTTTTATCCCAAATGTGATGATGTATTGAACTTAAAAAAGTTATATGGTACTGTCTCTGAACTAAAACTTTATTGATTTTGTCATGTTTCTTTTTGTAATTAGGTTAGAAGCCTTGGTAGCAATTCTTATAATTAGCTTGGTTGGGATTGCAAATCAATATAAATGGAGTTGCTTTTTGTAATTAGGTTAGAAGTCTTGGTAGCAATTCCAAAGGTACAACCACGGTTTTCCGTACCAATATGGAAGAAATATCCGACCATGAAATCTTTTTCGAGAGTGTACATGAATCCATGTAAATCTGTGAGTCTGAATCGAACAATTCACCTTATCCTCAATTGCATAAGCTAGCAGTCATGGCAGATCACATTTCTTCTTGGTCCACTCATGTAATAACAGGTGCATGAAAAGGAATTTCTGCTGAAAGACTGGACGACAGAAGGTTTACTCGGCAATGATAGAAGGTTAGGAGAGATTTGTTCGAAGAGAGTGTACAGGATACTTATGGCTCAAAGTGGAAGCATGAGAACTGATGACGTTGAGGAGGGTGATGACTTGTTCAGATCCTAATTGTCTTAATTAATTATCATATCTAATTAGCACACCATTATTTTAATGCAATAGCTTATTGCAGAGTTTTCACCCTCGCAGACAGGTTGAAGGACTAGAGTGCCCTCATCTCTTTATCACAAATGCCACTTGGAGGCAGCGACTCGTGGAGCAAAGGGTAAATAAGTAAGTTTTCGTTGTTCAATATCCAAATCTGAATTCTCCCATCAACAAGGTAGAACTGTCCAAAATGAACTTCTTGGCTGGAGTACAATTAATTTTTCTTGCTTTTTAGTAGAGTAATTTCAACTAGGTGGGAAACCAGCATTTCACCTTGATGTTCAGTGACATAGTGTTGCACGATCCCATGTTGGTTGGAGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTTTCCCTAGCTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAAAGGACAAATATCTGCTAGCGGTGGGCTTGGGTGGTTACATATATACCTCTTTCCTTATAATTTGTCCAAAGTGCATTACAATGTTAGGTTATAGAGACGAACGTATTGACTAATCGTTCCTTGTTCTTTTAACCGTAGTTAGAAGTGAATTGATCATCTATAGAAAGATTTCTATGTAAAGTGAACATAGTTTGATATGGTATCAGAATTCAAAGGGCTAATTGCTACTTTATATTGTGTGAGTTAGTTCAAGTTTGGCATTTTTTGGTGGGAGGTTTGGTTTGGTAGTAGTAACGGTATGGTTAGGTAGAAGTTTTGATATCCTAAAAGTAGGGAGAATATTGAATTATACCAAAAAAGAAGAGACTCAAGGTTGATATCAATAATGACAACAATTTGGTGGTACTATTTTTTCTCATCCCCACCCTGCTTCCTCATATTCCAATTTTATGTGGTTCGAAATCCATCAGAAGCATTGCATTCAAACAAGTGGATTGCTCACTTTGTAGGGTTTGTGTAATTTCCAACAGAGAGCCAAAATTTTGATGATTGTGACCCAAATCCAATTAAATTATGGTTGGGCATGGCCATTCCTCTAATCCAATTCACACTCATCCTAATTCCACCACACAAAACACCCACTAATGGGTGCTGCCACCAGCTCGCACCACTTTTGTTTTTTGAATGCCTCTTTCACCCAAGGAAATCTTACCTGAATGTATAATTGATCTCTTTTAAAGTTCATGAATTATTTTTGGACAAAGGTAGAAATGGGATTGGAAGTTTTTAATACTAAAGAAGATCTTGATTAATTGATTTACCGGATCAATCATTAGTTAATTATGTTTTTATATTGTTTTGGATTAGGTAATTGTTGCATCTTTCATAGAAGATCTCTGGACATTAGAATATAGGAAATTAAAATTCACATTCGCAATACTCATTTTGGTGCTTCGCACTTTCGCAAAGTGA

mRNA sequence

ATGAAAGTTCTGTTTCATTTAGAAGAAAATATATTTATTACATGCTCTTTGCAATTTCAGTATCTTTGTCCTGGGAACAGGAGAAGTACAAGAACTCAGAAAGCAATAACGAAATTGGCAAAACTGACCACTCACTTTGTCAAGGTACGTTCTAGGCAGTGTGTAGATGAAACTGAGGCAGCTGACATATTGACATGCAGTCTGGCATCCTTTCAATTCAGTCAGAATTATCTATTTTCCTTTGCTTGTCTTGTAAAATTGAGGAAAAAGTTGACGCATCTATCCGTCAATGCAATTGGATCCATTATACCCAAAGATTGTGTTCACAGGAATGTGATAGAGAAGTGCGTGAGGTTAGAAGTCTTGGTAGCAATTCCAAAGGTACAACCACGGTTTTCCGTACCAATATGGAAGAAATATCCGACCATGAAATCTTTTTCGAGAGTGTACATGAATCCATGTAAATCTGTGCATGAAAAGGAATTTCTGCTGAAAGACTGGACGACAGAAGGTTTACTCGGCAATGATAGAAGGTTAGGAGAGATTTGTTCGAAGAGAGTGTACAGGATACTTATGGCTCAAAGTGGAAGCATGAGAACTGATGACAGTTTTCACCCTCGCAGACAGGTTGAAGGACTAGAGTGCCCTCATCTCTTTATCACAAATGCCACTTGGAGGCAGCGACTCGTGGAGCAAAGGGTAATTGTTGCATCTTTCATAGAAGATCTCTGGACATTAGAATATAGGAAATTAAAATTCACATTCGCAATACTCATTTTGGTGCTTCGCACTTTCGCAAAGTGA

Coding sequence (CDS)

ATGAAAGTTCTGTTTCATTTAGAAGAAAATATATTTATTACATGCTCTTTGCAATTTCAGTATCTTTGTCCTGGGAACAGGAGAAGTACAAGAACTCAGAAAGCAATAACGAAATTGGCAAAACTGACCACTCACTTTGTCAAGGTACGTTCTAGGCAGTGTGTAGATGAAACTGAGGCAGCTGACATATTGACATGCAGTCTGGCATCCTTTCAATTCAGTCAGAATTATCTATTTTCCTTTGCTTGTCTTGTAAAATTGAGGAAAAAGTTGACGCATCTATCCGTCAATGCAATTGGATCCATTATACCCAAAGATTGTGTTCACAGGAATGTGATAGAGAAGTGCGTGAGGTTAGAAGTCTTGGTAGCAATTCCAAAGGTACAACCACGGTTTTCCGTACCAATATGGAAGAAATATCCGACCATGAAATCTTTTTCGAGAGTGTACATGAATCCATGTAAATCTGTGCATGAAAAGGAATTTCTGCTGAAAGACTGGACGACAGAAGGTTTACTCGGCAATGATAGAAGGTTAGGAGAGATTTGTTCGAAGAGAGTGTACAGGATACTTATGGCTCAAAGTGGAAGCATGAGAACTGATGACAGTTTTCACCCTCGCAGACAGGTTGAAGGACTAGAGTGCCCTCATCTCTTTATCACAAATGCCACTTGGAGGCAGCGACTCGTGGAGCAAAGGGTAATTGTTGCATCTTTCATAGAAGATCTCTGGACATTAGAATATAGGAAATTAAAATTCACATTCGCAATACTCATTTTGGTGCTTCGCACTTTCGCAAAGTGA

Homology

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BLAST of CmoCh07G007950 vs. Swiss-Prot
Match: EME1B_ARATH (Crossover junction endonuclease EME1B OS=Arabidopsis thaliana GN=EME1B PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-46
Identity = 102/186 (54.84%), Postives = 129/186 (69.35%), Query Frame = 1


Query: 20  QYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQN 79
           +Y  PGN R     +    LAKLTTH+VKV SR CVDE E A+    LT SLAS QF   
Sbjct: 368 EYKNPGNWRRPPIDEV---LAKLTTHYVKVHSRHCVDEAEVAEHIVGLTSSLASCQF--- 427

Query: 80  YLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPI 139
                      RKKLT LSV+A G+++ KD V +++I+K   L+ LVAIPKVQPR+++ +
Sbjct: 428 -----------RKKLTMLSVSANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYALAV 487

Query: 140 WKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSG 199
           WKKYP+MKS  +VYM+  KSVHEKEFLLKD   EGL+G D RLGEICSKR+YR+LM+  G
Sbjct: 488 WKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKVEGLVGGDIRLGEICSKRIYRVLMSHDG 536

Query: 200 SMRTDD 203
           +++TDD
Sbjct: 548 AIKTDD 536

[Close]

BLAST of CmoCh07G007950 vs. Swiss-Prot
Match: EME1A_ARATH (Crossover junction endonuclease EME1A OS=Arabidopsis thaliana GN=EME1A PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38
Identity = 88/186 (47.31%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 20  QYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQN 79
           +Y  P N    R       +AKL+TH++ V SR CVDE E AD    LT SLA  Q    
Sbjct: 359 EYKDPVNGCGWRKPPIDEAIAKLSTHYIGVHSRHCVDEAEVADHVVRLTSSLAHCQ---- 418

Query: 80  YLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPI 139
                     +RKKLT LSV A G+++ K+   +++I + + L+VLVAIPKVQPR+++ +
Sbjct: 419 ----------VRKKLTRLSVYADGTLMSKNAADKHLIRESIWLKVLVAIPKVQPRYAIAV 478

Query: 140 WKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSG 199
            KKYP++KS  +VYM+P  SVHEKEFLLKD   E L+G D  +GE CSKR+YR+LM+  G
Sbjct: 479 SKKYPSLKSLLKVYMDPNISVHEKEFLLKDLKVENLVGRDTSVGEACSKRIYRVLMSLDG 530

Query: 200 SMRTDD 203
           +++TDD
Sbjct: 539 TIKTDD 530

[Close]

BLAST of CmoCh07G007950 vs. Swiss-Prot
Match: EME1_ORYSJ (Crossover junction endonuclease EME1 OS=Oryza sativa subsp. japonica GN=EME1 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-30
Identity = 84/180 (46.67%), Postives = 106/180 (58.89%), Query Frame = 1


Query: 26  NRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNYLFSFA 85
           N  S +       L KL TH+ +VRSR C DE E  +    LT SLA+ +F         
Sbjct: 479 NSNSWKRPPVEEALCKLATHYARVRSRHCTDEAEVTEHIVGLTYSLANCKF--------- 538

Query: 86  CLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIWKKYPT 145
                RK LT LSV+A GS I K CV ++ I+K   L+ LVAIP V P  ++ I KKYP+
Sbjct: 539 -----RKPLTWLSVHANGSNISKGCVDKDRIKKSAWLKSLVAIPGVSPGQAIAIEKKYPS 598

Query: 146 MKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGN-DRRLGEICSKRVYRILMAQSGSMRTD 202
           M+S   VYM+  KSVHEKE LL+D   EG LG+  RRLG  CSK+VY ILMAQ+G+   +
Sbjct: 599 MRSLLNVYMDDSKSVHEKEHLLEDLRLEGPLGDFKRRLGPACSKKVYTILMAQNGAAEVE 644

[Close]

BLAST of CmoCh07G007950 vs. TrEMBL
Match: A0A0A0KHY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486820 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 122/168 (72.62%), Postives = 134/168 (79.76%), Query Frame = 1


Query: 38  KLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNYLFSFACLVKLRKKLTHL 97
           +LAKLTTHFVKVRSRQCVDE E AD    LTC LAS QF              RKKLTHL
Sbjct: 397 ELAKLTTHFVKVRSRQCVDEAEVADHIVGLTCGLASCQF--------------RKKLTHL 456

Query: 98  SVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIWKKYPTMKSFSRVYMNPC 157
           SVNA GSIIPKDCV RN+I+K + L+ LVAIPKVQPRF++ +WKKYPTMKS   VYM+P 
Sbjct: 457 SVNANGSIIPKDCVDRNMIKKSLWLKALVAIPKVQPRFAIAVWKKYPTMKSLLSVYMDPR 516

Query: 158 KSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSGSMRTDD 203
           KSVHEKEFLLKD T EGLLG+DRRLGEICSKRVYRILMAQ+G+MRTDD
Sbjct: 517 KSVHEKEFLLKDLTIEGLLGDDRRLGEICSKRVYRILMAQNGNMRTDD 550

[Close]

BLAST of CmoCh07G007950 vs. TrEMBL
Match: D7SW92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01900 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.6e-56
Identity = 122/188 (64.89%), Postives = 137/188 (72.87%), Query Frame = 1


Query: 18  QFQYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFS 77
           Q  Y  P N  S R       L+KLTTHF++V SRQC+DE E A+    LTCSLAS QF 
Sbjct: 257 QGHYKNPTNSSSWRRPPVEEVLSKLTTHFLRVHSRQCIDEAELAEHVVGLTCSLASCQF- 316

Query: 78  QNYLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSV 137
                        RKKLT LSVNA GS+IPKD   RN+I+K V L+ LVAIPKVQPRF++
Sbjct: 317 -------------RKKLTRLSVNANGSLIPKDSTDRNLIKKSVWLKALVAIPKVQPRFAI 376

Query: 138 PIWKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQ 197
            IWKKYPTMKS  RVYM+P KSVHEKEFLLKD TTEGLLG DRRLGE+CSKRVYRILMAQ
Sbjct: 377 AIWKKYPTMKSLLRVYMDPSKSVHEKEFLLKDLTTEGLLGEDRRLGEVCSKRVYRILMAQ 430

Query: 198 SGSMRTDD 203
           SG+M+TDD
Sbjct: 437 SGNMKTDD 430

[Close]

BLAST of CmoCh07G007950 vs. TrEMBL
Match: V7CR07_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G267400g PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.4e-53
Identity = 119/188 (63.30%), Postives = 135/188 (71.81%), Query Frame = 1


Query: 18  QFQYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFS 77
           Q +Y  P N    R       LAKLTT+F KV SRQCVDE E A+    LTCSLAS QF 
Sbjct: 472 QEKYKNPENNSCWRRPPIEEVLAKLTTNFNKVHSRQCVDEAELAEHVVGLTCSLASCQF- 531

Query: 78  QNYLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSV 137
                        RKKLT LSV+A G++IPKDCV RN+I+K + L+ LV+IPKVQPRF++
Sbjct: 532 -------------RKKLTRLSVHANGALIPKDCVDRNLIKKSLWLKGLVSIPKVQPRFAI 591

Query: 138 PIWKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQ 197
            IWKKYPTMKS   VYM+PCKS HEKEFLLKD  TEGLLG DRRLGE+CSKRVYRILMAQ
Sbjct: 592 AIWKKYPTMKSLLSVYMDPCKSEHEKEFLLKDLMTEGLLGGDRRLGEVCSKRVYRILMAQ 645

Query: 198 SGSMRTDD 203
           SG +RTDD
Sbjct: 652 SGCIRTDD 645

[Close]

BLAST of CmoCh07G007950 vs. TrEMBL
Match: W9R222_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006719 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-53
Identity = 116/169 (68.64%), Postives = 129/169 (76.33%), Query Frame = 1


Query: 37  TKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNYLFSFACLVKLRKKLTH 96
           T LAKLTTHFVKV SRQCVDE E A+    LTCSLAS QF              RKKLT 
Sbjct: 103 TALAKLTTHFVKVHSRQCVDEAELAEHVVGLTCSLASCQF--------------RKKLTR 162

Query: 97  LSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIWKKYPTMKSFSRVYMNP 156
           LSVNA GS+IPKD V +N+I   + L+ LVAIPKVQPRF+V IW+KYPTMKS   VYM+P
Sbjct: 163 LSVNANGSLIPKDFVDKNLIRNNLWLKALVAIPKVQPRFAVAIWRKYPTMKSLLNVYMDP 222

Query: 157 CKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSGSMRTDD 203
            KSVHEKEFLLKD T EGL+G DRRLGE+CSKRVYRILMAQSGS++TDD
Sbjct: 223 SKSVHEKEFLLKDLTIEGLIGEDRRLGEVCSKRVYRILMAQSGSIKTDD 257

[Close]

BLAST of CmoCh07G007950 vs. TrEMBL
Match: M5VYM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007115mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.6e-52
Identity = 115/185 (62.16%), Postives = 132/185 (71.35%), Query Frame = 1


Query: 21  YLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNY 80
           Y  P N    R       LAKLTT+F KV SRQC+DE E A+    LTCSL+S QF    
Sbjct: 201 YKNPTNHSGRRLPPVEEALAKLTTNFFKVHSRQCMDEAELAEHVVGLTCSLSSCQF---- 260

Query: 81  LFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIW 140
                     RKKLT L VNA GS+IPKDC+ RN+I+K   L+ LVAIPKVQPRF++ IW
Sbjct: 261 ----------RKKLTRLDVNANGSLIPKDCLDRNLIKKSPWLKALVAIPKVQPRFAIAIW 320

Query: 141 KKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSGS 200
           KKYPTMKS   +YM+P  SVHEKEFLLKD TTEGLLG+DRRLGE+CSKRVYRILMAQSG 
Sbjct: 321 KKYPTMKSLLSIYMDPNISVHEKEFLLKDLTTEGLLGDDRRLGEVCSKRVYRILMAQSGC 371

Query: 201 MRTDD 203
           ++TDD
Sbjct: 381 IKTDD 371

[Close]

BLAST of CmoCh07G007950 vs. TAIR10
Match: AT2G22140.1 (AT2G22140.1 essential meiotic endonuclease 1B)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-47
Identity = 102/186 (54.84%), Postives = 129/186 (69.35%), Query Frame = 1


Query: 20  QYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQN 79
           +Y  PGN R     +    LAKLTTH+VKV SR CVDE E A+    LT SLAS QF   
Sbjct: 368 EYKNPGNWRRPPIDEV---LAKLTTHYVKVHSRHCVDEAEVAEHIVGLTSSLASCQF--- 427

Query: 80  YLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPI 139
                      RKKLT LSV+A G+++ KD V +++I+K   L+ LVAIPKVQPR+++ +
Sbjct: 428 -----------RKKLTMLSVSANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYALAV 487

Query: 140 WKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSG 199
           WKKYP+MKS  +VYM+  KSVHEKEFLLKD   EGL+G D RLGEICSKR+YR+LM+  G
Sbjct: 488 WKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKVEGLVGGDIRLGEICSKRIYRVLMSHDG 536

Query: 200 SMRTDD 203
           +++TDD
Sbjct: 548 AIKTDD 536

[Close]

BLAST of CmoCh07G007950 vs. TAIR10
Match: AT2G21800.2 (AT2G21800.2 essential meiotic endonuclease 1A)

HSP 1 Score: 161.4 bits (407), Expect = 7.8e-40
Identity = 88/186 (47.31%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 20  QYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQN 79
           +Y  P N    R       +AKL+TH++ V SR CVDE E AD    LT SLA  Q    
Sbjct: 362 EYKDPVNGCGWRKPPIDEAIAKLSTHYIGVHSRHCVDEAEVADHVVRLTSSLAHCQ---- 421

Query: 80  YLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPI 139
                     +RKKLT LSV A G+++ K+   +++I + + L+VLVAIPKVQPR+++ +
Sbjct: 422 ----------VRKKLTRLSVYADGTLMSKNAADKHLIRESIWLKVLVAIPKVQPRYAIAV 481

Query: 140 WKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSG 199
            KKYP++KS  +VYM+P  SVHEKEFLLKD   E L+G D  +GE CSKR+YR+LM+  G
Sbjct: 482 SKKYPSLKSLLKVYMDPNISVHEKEFLLKDLKVENLVGRDTSVGEACSKRIYRVLMSLDG 533

Query: 200 SMRTDD 203
           +++TDD
Sbjct: 542 TIKTDD 533

[Close]

BLAST of CmoCh07G007950 vs. NCBI nr
Match: gi|659079130|ref|XP_008440091.1| (PREDICTED: crossover junction endonuclease EME1B isoform X2 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 3.2e-59
Identity = 125/168 (74.40%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 38  KLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNYLFSFACLVKLRKKLTHL 97
           +LAKL+THFVKVRSRQCVDE E AD    LTC LAS QF              RKKLTHL
Sbjct: 397 ELAKLSTHFVKVRSRQCVDEAEVADHIVGLTCGLASCQF--------------RKKLTHL 456

Query: 98  SVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIWKKYPTMKSFSRVYMNPC 157
           SVNA GSIIPKDCV RN+I+K + L+ LVAIPKVQPRF++ IWKKYPTMKS   VYM+PC
Sbjct: 457 SVNANGSIIPKDCVDRNMIKKSLWLKALVAIPKVQPRFAIAIWKKYPTMKSLLSVYMDPC 516

Query: 158 KSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSGSMRTDD 203
           KSVHEKEFLLKD T EGLLG+DRRLGEICSKRVYRILMAQSGSMRTDD
Sbjct: 517 KSVHEKEFLLKDLTIEGLLGDDRRLGEICSKRVYRILMAQSGSMRTDD 550

[Close]

BLAST of CmoCh07G007950 vs. NCBI nr
Match: gi|659079128|ref|XP_008440090.1| (PREDICTED: crossover junction endonuclease EME1B isoform X1 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 3.2e-59
Identity = 125/168 (74.40%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 38  KLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNYLFSFACLVKLRKKLTHL 97
           +LAKL+THFVKVRSRQCVDE E AD    LTC LAS QF              RKKLTHL
Sbjct: 397 ELAKLSTHFVKVRSRQCVDEAEVADHIVGLTCGLASCQF--------------RKKLTHL 456

Query: 98  SVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIWKKYPTMKSFSRVYMNPC 157
           SVNA GSIIPKDCV RN+I+K + L+ LVAIPKVQPRF++ IWKKYPTMKS   VYM+PC
Sbjct: 457 SVNANGSIIPKDCVDRNMIKKSLWLKALVAIPKVQPRFAIAIWKKYPTMKSLLSVYMDPC 516

Query: 158 KSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSGSMRTDD 203
           KSVHEKEFLLKD T EGLLG+DRRLGEICSKRVYRILMAQSGSMRTDD
Sbjct: 517 KSVHEKEFLLKDLTIEGLLGDDRRLGEICSKRVYRILMAQSGSMRTDD 550

[Close]

BLAST of CmoCh07G007950 vs. NCBI nr
Match: gi|449448582|ref|XP_004142045.1| (PREDICTED: crossover junction endonuclease EME1B isoform X1 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 1.7e-57
Identity = 122/168 (72.62%), Postives = 134/168 (79.76%), Query Frame = 1


Query: 38  KLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFSQNYLFSFACLVKLRKKLTHL 97
           +LAKLTTHFVKVRSRQCVDE E AD    LTC LAS QF              RKKLTHL
Sbjct: 397 ELAKLTTHFVKVRSRQCVDEAEVADHIVGLTCGLASCQF--------------RKKLTHL 456

Query: 98  SVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSVPIWKKYPTMKSFSRVYMNPC 157
           SVNA GSIIPKDCV RN+I+K + L+ LVAIPKVQPRF++ +WKKYPTMKS   VYM+P 
Sbjct: 457 SVNANGSIIPKDCVDRNMIKKSLWLKALVAIPKVQPRFAIAVWKKYPTMKSLLSVYMDPR 516

Query: 158 KSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQSGSMRTDD 203
           KSVHEKEFLLKD T EGLLG+DRRLGEICSKRVYRILMAQ+G+MRTDD
Sbjct: 517 KSVHEKEFLLKDLTIEGLLGDDRRLGEICSKRVYRILMAQNGNMRTDD 550

[Close]

BLAST of CmoCh07G007950 vs. NCBI nr
Match: gi|296082536|emb|CBI21541.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 225.7 bits (574), Expect = 9.5e-56
Identity = 122/188 (64.89%), Postives = 137/188 (72.87%), Query Frame = 1


Query: 18  QFQYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFS 77
           Q  Y  P N  S R       L+KLTTHF++V SRQC+DE E A+    LTCSLAS QF 
Sbjct: 257 QGHYKNPTNSSSWRRPPVEEVLSKLTTHFLRVHSRQCIDEAELAEHVVGLTCSLASCQF- 316

Query: 78  QNYLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSV 137
                        RKKLT LSVNA GS+IPKD   RN+I+K V L+ LVAIPKVQPRF++
Sbjct: 317 -------------RKKLTRLSVNANGSLIPKDSTDRNLIKKSVWLKALVAIPKVQPRFAI 376

Query: 138 PIWKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQ 197
            IWKKYPTMKS  RVYM+P KSVHEKEFLLKD TTEGLLG DRRLGE+CSKRVYRILMAQ
Sbjct: 377 AIWKKYPTMKSLLRVYMDPSKSVHEKEFLLKDLTTEGLLGEDRRLGEVCSKRVYRILMAQ 430

Query: 198 SGSMRTDD 203
           SG+M+TDD
Sbjct: 437 SGNMKTDD 430

[Close]

BLAST of CmoCh07G007950 vs. NCBI nr
Match: gi|731397468|ref|XP_010652885.1| (PREDICTED: crossover junction endonuclease EME1B-like [Vitis vinifera])

HSP 1 Score: 225.7 bits (574), Expect = 9.5e-56
Identity = 122/188 (64.89%), Postives = 137/188 (72.87%), Query Frame = 1


Query: 18  QFQYLCPGNRRSTRTQKAITKLAKLTTHFVKVRSRQCVDETEAADI---LTCSLASFQFS 77
           Q  Y  P N  S R       L+KLTTHF++V SRQC+DE E A+    LTCSLAS QF 
Sbjct: 395 QGHYKNPTNSSSWRRPPVEEVLSKLTTHFLRVHSRQCIDEAELAEHVVGLTCSLASCQF- 454

Query: 78  QNYLFSFACLVKLRKKLTHLSVNAIGSIIPKDCVHRNVIEKCVRLEVLVAIPKVQPRFSV 137
                        RKKLT LSVNA GS+IPKD   RN+I+K V L+ LVAIPKVQPRF++
Sbjct: 455 -------------RKKLTRLSVNANGSLIPKDSTDRNLIKKSVWLKALVAIPKVQPRFAI 514

Query: 138 PIWKKYPTMKSFSRVYMNPCKSVHEKEFLLKDWTTEGLLGNDRRLGEICSKRVYRILMAQ 197
            IWKKYPTMKS  RVYM+P KSVHEKEFLLKD TTEGLLG DRRLGE+CSKRVYRILMAQ
Sbjct: 515 AIWKKYPTMKSLLRVYMDPSKSVHEKEFLLKDLTTEGLLGEDRRLGEVCSKRVYRILMAQ 568

Query: 198 SGSMRTDD 203
           SG+M+TDD
Sbjct: 575 SGNMKTDD 568

The following BLAST results are available for this feature:

BLAST of CmoCh07G007950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EME1B_ARATH	4.0e-46	54.84	Crossover junction endonuclease EME1B OS=Arabidopsis thaliana GN=EME1B PE=1 SV=1	[more]
EME1A_ARATH	1.4e-38	47.31	Crossover junction endonuclease EME1A OS=Arabidopsis thaliana GN=EME1A PE=1 SV=1	[more]
EME1_ORYSJ	1.8e-30	46.67	Crossover junction endonuclease EME1 OS=Oryza sativa subsp. japonica GN=EME1 PE=...	[more]

BLAST of CmoCh07G007950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHY1_CUCSA	1.2e-57	72.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486820 PE=4 SV=1	[more]
D7SW92_VITVI	6.6e-56	64.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01900 PE=4 SV=...	[more]
V7CR07_PHAVU	2.4e-53	63.30	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G267400g PE=4 SV=1	[more]
W9R222_9ROSA	3.1e-53	68.64	Uncharacterized protein OS=Morus notabilis GN=L484_006719 PE=4 SV=1	[more]
M5VYM1_PRUPE	2.6e-52	62.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007115mg PE=4 SV=1	[more]

BLAST of CmoCh07G007950 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22140.1	2.3e-47	54.84	essential meiotic endonuclease 1B	[more]
AT2G21800.2	7.8e-40	47.31	essential meiotic endonuclease 1A	[more]

BLAST of CmoCh07G007950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079130\|ref\|XP_008440091.1\|	3.2e-59	74.40	PREDICTED: crossover junction endonuclease EME1B isoform X2 [Cucumis melo]	[more]
gi\|659079128\|ref\|XP_008440090.1\|	3.2e-59	74.40	PREDICTED: crossover junction endonuclease EME1B isoform X1 [Cucumis melo]	[more]
gi\|449448582\|ref\|XP_004142045.1\|	1.7e-57	72.62	PREDICTED: crossover junction endonuclease EME1B isoform X1 [Cucumis sativus]	[more]
gi\|296082536\|emb\|CBI21541.3\|	9.5e-56	64.89	unnamed protein product [Vitis vinifera]	[more]
gi\|731397468\|ref\|XP_010652885.1\|	9.5e-56	64.89	PREDICTED: crossover junction endonuclease EME1B-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006281	DNA repair
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009411	response to UV
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048476	Holliday junction resolvase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G007950.1	CmoCh07G007950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13451	CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81	coord: 39..202 score: 2.0
None	No IPR available	PANTHER	PTHR13451:SF9	PROTEIN EME-1, ISOFORM A	coord: 39..202 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G007950	Cucsa.101390	Cucumber (Gy14) v1	cgycmoB0233
CmoCh07G007950	CmaCh03G010560	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G007950	Cla008474	Watermelon (97103) v1	cmowmB814
CmoCh07G007950	Csa6G486820	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G007950	MELO3C007452	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G007950	ClCG01G015860	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G007950	Lsi01G011080	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G007950	Cp4.1LG19g11920	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G007950	Cp4.1LG10g03340	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G007950	MELO3C007452.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G007950	CsaV3_6G042140	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G007950	Cla97C01G014840	Watermelon (97103) v2	cmowmbB849
CmoCh07G007950	Bhi03G001092	Wax gourd	cmowgoB1066
CmoCh07G007950	CsGy6G026350	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G007950	Carg05282	Silver-seed gourd	carcmoB1100
CmoCh07G007950	Carg10570	Silver-seed gourd	carcmoB0338

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G007950	CmoCh03G010530	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G007950	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G007950	Wild cucumber (PI 183967)	cmocpiB873