Carg17557 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCTCCTCCTCCTCCTCCTCTTCCTCCTCTCTCGCTGCGAGGAACCCATTTGAAGAATGCATTCATTTGGGTATCGAGCCAACGCTCTGGTGACCTTTGCGGCCACCATACTTGCTATCATTTGTGCTTTGGCTTCGTTTTCTGATACCCTTAAATCGCCTTCACCCACGGCACAAGTTCAGGTCTCTCTCATCTCTTTCTGGGTTTTTTTGTTTTCTCTCTTCCTTTTGGATCTGTGGTTTGAATTCTCTTGGATTTTGGTTGGTTTTTGATACTCATTTGGTGATTTGATTTGATACCCATTAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTATGGTTTCATTGGCTTTTCTCTTTGAGTTCTTGGGAATTTGTGTGAGGAGAGGGATTTTGAGGTTGATTGTGTAGTTGATTTCATTTTGAGAACGTGATGAGATTTACCATCTTTTGGTGTTCATGGTTTGTTCTTTGTTGTGATGAATTGGGAGATTCTTGTATAGGAAAATGATTGAGAATGGCTGGGGAGAAGACTCAATAGGTTAGTGTGAGATCCCACGTCGGTTGGAGAGGGGAAGGAAACATTCCGTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACCGCGAGATTGACGGTGATATGTAACGGGCAAAAGCGGACAATATCCACTAACGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAAACAGACACCGGACAATGTGTCAGCGAGGACGCTGGACCTCAGGGAGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGAACGAAAGATTCCTTATAAGGGTGTGGAAACTTCTCCCTAACAGACACTTTTTAAAAAATTGTGAGGCTGACGATGATACATAACGGGCCAAAATAGACAAAATCTACTAGCGGTGGGCTTGAGTTGTTACAAATGGTATCAGAGCCATATAAACACGGGGGAATGTGCCAGCGAGGACTCTTGGCCTCAAAGGATGGTAGATTGTGATATTTCACATTGGTTGGAGGGAGGAACGAAAGATTCCTTATAAGGGTGTAGAAACCTCTCCCTAGCACACGCGTTTTAAAAATCGTGAGACTAACGGTGATACATAATGAGCTAAGGCAGACAATATCTACTAGCGGTGGGCTGAAGCTGTTACAAATGGTATCAGAGCCAAACAAACACAAGGCAAGGTGTCAGCGAGGACGTTGGGCCTCAAAGAGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGACGAAACATTCCTTATAAGGGTGTAGAAACCTCTTCCTAACAGACGTGTTTTAAAAACCGTGAGGCTAACGGCTATACGTAACAAGCCAAAGCGGACAATATCTACTAGCAGTGGGTTTAGACCGTAAAAAATGGCCTCCTTCAGTTCTTCACAGCACTTTTTTCAACCAATGTTCTTAATAACTCGCTATAACCAAAGAAAAGTAGTCAATATTTGTTGTTGATAAGGGTAAATGAGATTCTTTGCTAGAGCAGCTAATAAGCTTAGAATGTGCCTTCTTGTTGCAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTGCAGTGGCAACCTATTATTCTCCTCTTTCTTTATGGTGTTCTCATAGTCCTTAGCGGTCTGGTTGGTTAACTATGATTAGGCTCCTCAACTCTAGCAAAGACTTAACTCATAAAGTACCCTAACGTTCACGCCAAACGCTAAGCCATTCTCTCCGACTCTGTTACTACTAAGCCATTGTCCCCCAACTCTCATACTTTGTTTAGCTTGAGTTAATAGTGTTTTAAGGAGCAATTAGATTAGATGATGATGTTCTTTCTCCAATTTTGCTCGCTTGGAATCAGGCTTAAATTCTAGGCCCTCCACCTTTTCTTGTTTACTGAGCGAGGAAATGAACCTCTACGACAGATATATGATAAGGTAACACCTAAAATGACAGTCACCGTGTAGAGAGCAACTGAAAGGGTTGTGTTTTCCTCCATCTTGAGGATCGAAATTTCTTGTGTTGTGTCCGTGTCAATAGTTAGATCCTAATTCGGCTACCTCTCCCCAAGGCCGAACACATTTTGCCTAGGGTGATCACTGATCATTGGTGGCTTCTTTGCCTCTATTTGTGCAACAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGGTCTATCTCTATTTCCTATTACAATATGTTCTTAACCCGCTGGTGAGTTTCGTCTCTTTCAGCAACTCGACGTGACCTAAATTTCCAGAATTTCATTTACAGATCTCACTCTGGGACAGTATCATACCCTCCAAAGATAGGGCCAAGTTTCGAATCCATACTTCAAACAAGTATCGGTTCGTCGATCAGGTTCGCACCTCCTATCCTTTTGCACAACTTTGCCAACCAATCTATGATGATTATATGCTTTATCCTAGAGTGACAAAGTTGTATTTCTCCTTATGCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTCTGGATACCGCTTGCCACAAGAATATAGATGA CCCTCCTCCTCCTCCTCCTCTTCCTCCTCTCTCGCTGCGAGGAACCCATTTGAAGAATGCATTCATTTGGGTATCGAGCCAACGCTCTGGTGACCTTTGCGGCCACCATACTTGCTATCATTTGTGCTTTGGCTTCGTTTTCTGATACCCTTAAATCGCCTTCACCCACGGCACAAGTTCAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTCTGGGACAGTATCATACCCTCCAAAGATAGGGCCAAGTTTCGAATCCATACTTCAAACAAGTATCGGTTCGTCGATCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTCTGGATACCGCTTGCCACAAGAATATAGATGA ATGCATTCATTTGGGTATCGAGCCAACGCTCTGGTGACCTTTGCGGCCACCATACTTGCTATCATTTGTGCTTTGGCTTCGTTTTCTGATACCCTTAAATCGCCTTCACCCACGGCACAAGTTCAGGTTTTGAGTATCAATTGGTTTCAGAATCAACCTAATGGAAACGATGAGGTTAGCATGACTTTAAACATATCAGCAGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTAGCTGCTGAATATGAAACCCCAAAGAACTCCTTGAATCAGATCTCACTCTGGGACAGTATCATACCCTCCAAAGATAGGGCCAAGTTTCGAATCCATACTTCAAACAAGTATCGGTTCGTCGATCAGGGGAGCAATCTAAGAGGTAAAGAGTTTAACTTAACACTGCACTGGCATGTCATGCCAAAGACAGGGAAGATGTTTGCAAACAAATTGGTCATGTCTGGATACCGCTTGCCACAAGAATATAGATGA MHSFGYRANALVTFAATILAIICALASFSDTLKSPSPTAQVQVLSINWFQNQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDSIIPSKDRAKFRIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFANKLVMSGYRLPQEYR
BLAST of Carg17557 vs. NCBI nr
Match: XP_023521352.1 (signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521353.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521357.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023521358.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023538075.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo] >XP_023538076.1 signal peptidase complex subunit 3B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.7 bits (857), Expect = 1.8e-88 Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of Carg17557 vs. NCBI nr
Match: XP_022938136.1 (signal peptidase complex subunit 3B-like [Cucurbita moschata] >XP_022938137.1 signal peptidase complex subunit 3B-like [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 3.9e-88 Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of Carg17557 vs. NCBI nr
Match: XP_022965984.1 (signal peptidase complex subunit 3B-like [Cucurbita maxima]) HSP 1 Score: 327.0 bits (837), Expect = 3.7e-86 Identity = 162/167 (97.01%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of Carg17557 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84 Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of Carg17557 vs. NCBI nr
Match: XP_022150797.1 (signal peptidase complex subunit 3B-like [Momordica charantia]) HSP 1 Score: 319.7 bits (818), Expect = 5.9e-84 Identity = 153/167 (91.62%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of Carg17557 vs. TAIR10
Match: AT5G27430.1 (Signal peptidase subunit) HSP 1 Score: 280.4 bits (716), Expect = 7.2e-76 Identity = 130/167 (77.84%), Postives = 150/167 (89.82%), Query Frame = 0
BLAST of Carg17557 vs. TAIR10
Match: AT3G05230.1 (Signal peptidase subunit) HSP 1 Score: 269.6 bits (688), Expect = 1.3e-72 Identity = 125/167 (74.85%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of Carg17557 vs. Swiss-Prot
Match: sp|Q53YF3|SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-74 Identity = 130/167 (77.84%), Postives = 150/167 (89.82%), Query Frame = 0
BLAST of Carg17557 vs. Swiss-Prot
Match: sp|Q9MA96|SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.3e-71 Identity = 125/167 (74.85%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of Carg17557 vs. Swiss-Prot
Match: sp|Q9LGB4|SPCS3_ORYSJ (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28 Identity = 64/137 (46.72%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of Carg17557 vs. Swiss-Prot
Match: sp|B0G180|SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19 Identity = 50/166 (30.12%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of Carg17557 vs. Swiss-Prot
Match: sp|P28687|SPCS3_CHICK (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18 Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A1S3BZ61|A0A1S3BZ61_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84 Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of Carg17557 vs. TrEMBL
Match: tr|Q84KA8|Q84KA8_CUCME (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84 Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A2P5CTT2|A0A2P5CTT2_PARAD (Signal peptidase complex subunit 3 OS=Parasponia andersonii OX=3476 GN=PanDNF1 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.2e-80 Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0
BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A2P5C684|A0A2P5C684_9ROSA (Signal peptidase complex subunit 3 OS=Trema orientalis OX=63057 GN=TorDNF1 PE=3 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.5e-80 Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0
BLAST of Carg17557 vs. TrEMBL
Match: tr|A0A2P6R6T7|A0A2P6R6T7_ROSCH (Signal peptidase complex subunit 3 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0454281 PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 4.5e-80 Identity = 146/167 (87.43%), Postives = 158/167 (94.61%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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