Carg08459-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08459-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	secoisolariciresinol dehydrogenase
Location	Cucurbita_argyrosperma_scaffold_022 : 437043 .. 438001 (-)
Sequence length	882

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCGGAGTCATCTCGTAAGGAATTCGCTTACTTTGAGCTTCTTCAATAGGGGATTGTCTTCCCATGCTGGAAGGTGAGTTTGTTTATTATACTCTCTTCCAAAACCTTCAATGTTCTTGACATGGGTTAGATTTGGATTGGGATATGCAGGCTTGAAGGCAAGATTGCGCTGATTACAGGCGCAGCCAGCGGCATTGGGAAGGCAACGGCATCCAAATTCATAAGCAATGGAGCCAAAGTTGTGTTGGCGGATGTCGAGGAAGAGCTTGGCCAAGCGACGGCCAAGCAGCTTGGCCCCAACGCTACCTTCATCCCTTGTGATGTCAGCAACGAGGCCAATGTCTCTGATGCTGTAGATTTCGCTCTCTCTCTTCACAAAAGGCTTGACATAATGTACAACAATGCTGGGATTGCTTGCAATACTCCTCCAAGCATTTTGGACCTCGACCTTGCCGTATTCGATAAAGTTATGAACATTAATGTCCGAGGTGTTCTAGCTGGTATCAAGCACGCCTCTCGTGTTATGATCCCTCAACAATCAGGATCAATTTTATGCACGGCTAGTGTCACAGGAGTGATGGGTGGGTTAGCTCAACATACGTATTCTGTGTCAAAGGTCGCTGTTACCGGTATTGTCAAGTCCATGGCATCGGAGTTGTGTAAATATGGTATTCGAGTGAATTGCATATCACCATTTGCGATCCCGACACCATTTTCTATCAACGAAATGTGTCGCTTTTTTCCTGGAACTGAGAAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGGGCAGTTTGTGAGACTAATGATATAGCCAATGCCGCACTTTATCTTGCATCTGATGATGCAAAGTATGTAAGTGGGCACAATTTGGTGGTTGATGGCGGCTTTACCTGTTTCAAGAGGTTAAACTTACCTCTCCCTGATCAGAATCCAACATGA

mRNA sequence

ATGATTCGGAGTCATCTCGTAAGGAATTCGCTTACTTTGAGCTTCTTCAATAGGGGATTGTCTTCCCATGCTGGAAGGCTTGAAGGCAAGATTGCGCTGATTACAGGCGCAGCCAGCGGCATTGGGAAGGCAACGGCATCCAAATTCATAAGCAATGGAGCCAAAGTTGTGTTGGCGGATGTCGAGGAAGAGCTTGGCCAAGCGACGGCCAAGCAGCTTGGCCCCAACGCTACCTTCATCCCTTGTGATGTCAGCAACGAGGCCAATGTCTCTGATGCTGTAGATTTCGCTCTCTCTCTTCACAAAAGGCTTGACATAATGTACAACAATGCTGGGATTGCTTGCAATACTCCTCCAAGCATTTTGGACCTCGACCTTGCCGTATTCGATAAAGTTATGAACATTAATGTCCGAGGTGTTCTAGCTGGTATCAAGCACGCCTCTCGTGTTATGATCCCTCAACAATCAGGATCAATTTTATGCACGGCTAGTGTCACAGGAGTGATGGGTGGGTTAGCTCAACATACGTATTCTGTGTCAAAGGTCGCTGTTACCGGTATTGTCAAGTCCATGGCATCGGAGTTGTGTAAATATGGTATTCGAGTGAATTGCATATCACCATTTGCGATCCCGACACCATTTTCTATCAACGAAATGTGTCGCTTTTTTCCTGGAACTGAGAAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGGGCAGTTTGTGAGACTAATGATATAGCCAATGCCGCACTTTATCTTGCATCTGATGATGCAAAGTATGTAAGTGGGCACAATTTGGTGGTTGATGGCGGCTTTACCTGTTTCAAGAGGTTAAACTTACCTCTCCCTGATCAGAATCCAACATGA

Coding sequence (CDS)

ATGATTCGGAGTCATCTCGTAAGGAATTCGCTTACTTTGAGCTTCTTCAATAGGGGATTGTCTTCCCATGCTGGAAGGCTTGAAGGCAAGATTGCGCTGATTACAGGCGCAGCCAGCGGCATTGGGAAGGCAACGGCATCCAAATTCATAAGCAATGGAGCCAAAGTTGTGTTGGCGGATGTCGAGGAAGAGCTTGGCCAAGCGACGGCCAAGCAGCTTGGCCCCAACGCTACCTTCATCCCTTGTGATGTCAGCAACGAGGCCAATGTCTCTGATGCTGTAGATTTCGCTCTCTCTCTTCACAAAAGGCTTGACATAATGTACAACAATGCTGGGATTGCTTGCAATACTCCTCCAAGCATTTTGGACCTCGACCTTGCCGTATTCGATAAAGTTATGAACATTAATGTCCGAGGTGTTCTAGCTGGTATCAAGCACGCCTCTCGTGTTATGATCCCTCAACAATCAGGATCAATTTTATGCACGGCTAGTGTCACAGGAGTGATGGGTGGGTTAGCTCAACATACGTATTCTGTGTCAAAGGTCGCTGTTACCGGTATTGTCAAGTCCATGGCATCGGAGTTGTGTAAATATGGTATTCGAGTGAATTGCATATCACCATTTGCGATCCCGACACCATTTTCTATCAACGAAATGTGTCGCTTTTTTCCTGGAACTGAGAAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGGGCAGTTTGTGAGACTAATGATATAGCCAATGCCGCACTTTATCTTGCATCTGATGATGCAAAGTATGTAAGTGGGCACAATTTGGTGGTTGATGGCGGCTTTACCTGTTTCAAGAGGTTAAACTTACCTCTCCCTGATCAGAATCCAACATGA

Protein sequence

MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT

Homology

[Close]

BLAST of Carg08459-RA vs. NCBI nr
Match: XP_022958468.1 (secoisolariciresinol dehydrogenase [Cucurbita moschata])

HSP 1 Score: 567.0 bits (1460), Expect = 3.7e-158
Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD
Sbjct: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLH+RLDIMYNNAGIACNTPPS
Sbjct: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHRRLDIMYNNAGIACNTPPS 120

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           ILDLDLA+FDKVMNINVRGV+AGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS
Sbjct: 121 ILDLDLAIFDKVMNINVRGVVAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           KVAV GIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA
Sbjct: 181 KVAVIGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT 294
           LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDG FTCFKRLN PLPDQNP+
Sbjct: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGSFTCFKRLNFPLPDQNPS 293

[Close]

BLAST of Carg08459-RA vs. NCBI nr
Match: XP_023534149.1 (secoisolariciresinol dehydrogenase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.8 bits (1457), Expect = 8.3e-158
Identity = 287/293 (97.95%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           MIRSHL+RNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD
Sbjct: 1   MIRSHLLRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS
Sbjct: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS
Sbjct: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           KVAV GIVKSMASELCKYGIRVNCISPF IPTPF INEMCR FPGTEKEKLEKMIFDLSA
Sbjct: 181 KVAVIGIVKSMASELCKYGIRVNCISPFPIPTPFVINEMCRLFPGTEKEKLEKMIFDLSA 240

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT 294
           LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLN PLPDQNPT
Sbjct: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNFPLPDQNPT 293

[Close]

BLAST of Carg08459-RA vs. NCBI nr
Match: XP_022995920.1 (secoisolariciresinol dehydrogenase [Cucurbita maxima])

HSP 1 Score: 562.4 bits (1448), Expect = 9.1e-157
Identity = 285/293 (97.27%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           MIRSHL+RNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD
Sbjct: 1   MIRSHLLRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           VEEELGQATAKQLGPNATFIPCDVSNE+NVSDAVDFALSLHKRLDIM NNAGIACNTPPS
Sbjct: 61  VEEELGQATAKQLGPNATFIPCDVSNESNVSDAVDFALSLHKRLDIMCNNAGIACNTPPS 120

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS
Sbjct: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           KVAV GIVKSMASELCKYGIRVNCISPFAIPTPF+INEMC  FPGTEKEKLEKMIFDLSA
Sbjct: 181 KVAVIGIVKSMASELCKYGIRVNCISPFAIPTPFAINEMCHLFPGTEKEKLEKMIFDLSA 240

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT 294
           LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLN PLPDQNPT
Sbjct: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNFPLPDQNPT 293

[Close]

BLAST of Carg08459-RA vs. NCBI nr
Match: XP_022154505.1 (secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154507.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154508.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154509.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154510.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154511.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154512.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154513.1 secoisolariciresinol dehydrogenase [Momordica charantia])

HSP 1 Score: 483.8 bits (1244), Expect = 4.1e-133
Identity = 238/281 (84.70%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 9   NSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQA 68
           NSLT SFFNR LSSHAGRLEGKIALITGAASGIGKATASKFI+NGAKVV+ADV+E+LG  
Sbjct: 22  NSLTQSFFNRELSSHAGRLEGKIALITGAASGIGKATASKFINNGAKVVIADVKEKLGLE 81

Query: 69  TAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAV 128
           TA+QLGPNAT++PCDV+ E++VSDAVD+ +SLHK+LDIMYNNAG+ACNTPPSI+DLDLAV
Sbjct: 82  TAEQLGPNATYVPCDVTKESDVSDAVDYTISLHKKLDIMYNNAGVACNTPPSIVDLDLAV 141

Query: 129 FDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIV 188
           FDKVMN+NVRGVL GIKHASRVMIP+QSGSILCTASVTG+MGGLAQHTYSVSKVA+ G+V
Sbjct: 142 FDKVMNVNVRGVLVGIKHASRVMIPRQSGSILCTASVTGLMGGLAQHTYSVSKVAIIGMV 201

Query: 189 KSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCET 248
           KSMASELCKYGIRVNCISPF IPTPF + EM R FP TE++KLEKMIFD  ALEG VCET
Sbjct: 202 KSMASELCKYGIRVNCISPFPIPTPFVMEEMSRLFPRTEEQKLEKMIFDTGALEGTVCET 261

Query: 249 NDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPD 290
           NDIANAALYLASDDAKYVSGHNLVVDGGFTCFK LN P+PD
Sbjct: 262 NDIANAALYLASDDAKYVSGHNLVVDGGFTCFKCLNFPVPD 302

[Close]

BLAST of Carg08459-RA vs. NCBI nr
Match: XP_008467261.1 (PREDICTED: secoisolariciresinol dehydrogenase [Cucumis melo])

HSP 1 Score: 480.3 bits (1235), Expect = 4.6e-132
Identity = 243/287 (84.67%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 6   LVRNSLTLS-FFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEE 65
           L  NSLT S FFNR  SS  GRLEGKIALITGAASGIGKATA KFISNGAKVV+AD++E+
Sbjct: 10  LFNNSLTWSFFFNRRFSSQPGRLEGKIALITGAASGIGKATAGKFISNGAKVVIADIKEK 69

Query: 66  LGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDL 125
           LGQ TAKQLGPNATFI CDV+ E+N+SDAVDF +SLHK+LDIMYNNAGIACNTPPSI DL
Sbjct: 70  LGQDTAKQLGPNATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDL 129

Query: 126 DLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAV 185
           DLAVFDKVMN+NVRGVLAGIKHASRVMIP++SGSILCTASVTG+MGGLAQHTYSVSKVAV
Sbjct: 130 DLAVFDKVMNVNVRGVLAGIKHASRVMIPRRSGSILCTASVTGLMGGLAQHTYSVSKVAV 189

Query: 186 TGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGA 245
            GIVKS+ASELC+YGIRVNCISPF IPTPF I EM + FP  E+EKLEKMIFDLSALEG 
Sbjct: 190 IGIVKSLASELCRYGIRVNCISPFPIPTPFVIEEMTQLFPSVEEEKLEKMIFDLSALEGT 249

Query: 246 VCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           VCETNDIANAALYLASDDAKYVSGHNLVVDG FTCFK LN  LPDQN
Sbjct: 250 VCETNDIANAALYLASDDAKYVSGHNLVVDGAFTCFKSLNFSLPDQN 296

[Close]

BLAST of Carg08459-RA vs. TAIR10
Match: AT4G03140.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 371.7 bits (953), Expect = 4.2e-103
Identity = 180/287 (62.72%), Postives = 232/287 (80.84%), Query Frame = 0


Query: 10  SLTLSFFNRGLSSHAG------RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEE 69
           +++ +F  +G+SS +       +LEGK+ALITG ASGIGKATA KFIS+GAKV++AD++ 
Sbjct: 55  NVSKNFLIKGISSSSSSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQP 114

Query: 70  ELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILD 129
           ++G+ T ++LGP+  + PCDV+ E+++++AVDFA+SLH +LDIMYNNAGI C TPPSI+D
Sbjct: 115 QIGRETEQELGPSCAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVD 174

Query: 130 LDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVA 189
           LDL VFDKV+N NVRGV+AGIKHA+RVMIP+ SGSI+C  SVTG+MGGLAQHTYSVSK A
Sbjct: 175 LDLNVFDKVINTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSA 234

Query: 190 VTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEG 249
           V GIV+S ASELCK+ IRVNCISPFAI T F ++EM + +PG +  +L +++     L G
Sbjct: 235 VIGIVRSTASELCKHRIRVNCISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNG 294

Query: 250 AVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQ 291
            VCE  D+ANAA+YLASDD+KYV+GHNLVVDGGFT  K L+ P PDQ
Sbjct: 295 EVCEPTDVANAAVYLASDDSKYVNGHNLVVDGGFTTVKTLDFPAPDQ 341

[Close]

BLAST of Carg08459-RA vs. TAIR10
Match: AT3G26760.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 307.8 bits (787), Expect = 7.4e-84
Identity = 149/269 (55.39%), Postives = 202/269 (75.09%), Query Frame = 0


Query: 21  SSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFI 80
           S+ + +LEGK+A+ITG ASGIGKATA +F+S GA+V++ D++EE G   A +LG  A F+
Sbjct: 30  STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFL 89

Query: 81  PCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACN-TPPSILDLDLAVFDKVMNINVRG 140
            CDV+ E  ++ AV+ A++ H +LD+M N+AGI+C+ +PPSI DLD+  +DKVM +NVRG
Sbjct: 90  RCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRG 149

Query: 141 VLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYG 200
            + GIKHA+R MIP  SGSILC +S++G+MGGL  H YS+SK  + G+VK++ASELCK+G
Sbjct: 150 TVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHG 209

Query: 201 IRVNCISPFAIPTPFSINEMCRFFPG--TEKEKLEKMIFDLSALEGAVCETNDIANAALY 260
           +R+NCISP  IPTP ++      F G    +E+L  ++     L+G  CE  D+A AALY
Sbjct: 210 LRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALY 269

Query: 261 LASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           LASDDAK+V+GHNLVVDGGFTCFK LNLP
Sbjct: 270 LASDDAKFVTGHNLVVDGGFTCFKSLNLP 298

[Close]

BLAST of Carg08459-RA vs. TAIR10
Match: AT3G26770.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-81
Identity = 146/267 (54.68%), Postives = 198/267 (74.16%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVS 85
           +LEGK+ALITG ASG+GKATAS+F+ +GA+VV+AD++ E G  TAK+LG  A F+ CDV+
Sbjct: 40  KLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCDVT 99

Query: 86  NEANVSDAVDFALSLHKRLDIMYNNAGI-ACNTPPSILDLDLAVFDKVMNINVRGVLAGI 145
            EA+++ AV+  +  + +LD+MYNNAGI    TP SI  LD+  F++VM INV GV++GI
Sbjct: 100 VEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGI 159

Query: 146 KHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVNC 205
           KHA++ MIP +SG ILCT+SV GV GGLA H+Y++SK    GIVKS ASELC++G+R+NC
Sbjct: 160 KHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRINC 219

Query: 206 ISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDDAK 265
           ISP  + TP +++ + + FP   +EKL + +  +  L+GA CE  D+A AALYLAS+D K
Sbjct: 220 ISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASNDGK 279

Query: 266 YVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           YV+GHNLVVDGG T FK    P P  +
Sbjct: 280 YVTGHNLVVDGGMTAFKIAGFPFPSDS 306

[Close]

BLAST of Carg08459-RA vs. TAIR10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 133/265 (50.19%), Postives = 172/265 (64.91%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQL-----GPNATFI 85
           RLEGK+A+ITG A GIGKAT   F  +GA VV+ADV+   G + AK L      P   FI
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query: 86  PCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTP--PSILDLDLAVFDKVMNINVR 145
            CDVS EA+V + V+  ++ + RLDI++NNAG+  +     SILD D   FD VM +NVR
Sbjct: 91  SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query: 146 GVLAGIKHASRVMIPQQ-SGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCK 205
           GV  G+KH +R MI +   G I+ TASV GVMGG+  H Y+ SK A+ G+ K+ A EL K
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query: 206 YGIRVNCISPFAIPTPFSINEMCRFFPG----TEKEKLEKMIFDLSALEGAVCETNDIAN 265
           YGIRVNCISPF + T   +N   +   G     + E++E+ +  L+ L+G     NDIA 
Sbjct: 211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query: 266 AALYLASDDAKYVSGHNLVVDGGFT 279
           AALYLASD++KYV+GHNLVVDGG T
Sbjct: 271 AALYLASDESKYVNGHNLVVDGGVT 295

[Close]

BLAST of Carg08459-RA vs. TAIR10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 214.9 bits (546), Expect = 6.5e-56
Identity = 118/258 (45.74%), Postives = 166/258 (64.34%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPN-ATFIPCDV 85
           RLEGKI +ITG ASGIG   A  F  +GAKVV+ DV+EELGQ  A  +G + A+F  CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 86  SNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVRGVLAGI 145
           +NE  V DAV F +  H +LD++++NAG+      S LD DL  FD++M +NVRG  A I
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGV-LEPLESFLDFDLERFDRIMAVNVRGAAAFI 124

Query: 146 KHASRVMIPQQS-GSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVN 205
           KHA+R M+ + + GSI+CT SV+  +GG   H Y+ SK  + G+++S   +L KYGIRVN
Sbjct: 125 KHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVN 184

Query: 206 CISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDDA 265
            ++P+A+ TP + ++          ++LE        L+G V + + +A  AL+LASDD+
Sbjct: 185 GVAPYAVATPMTSHD------EVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDS 244

Query: 266 KYVSGHNLVVDGGFTCFK 282
            Y+SG NL VDGG+T  K
Sbjct: 245 AYISGQNLAVDGGYTVVK 254

[Close]

BLAST of Carg08459-RA vs. Swiss-Prot
Match: sp|Q94KL7|SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-63
Identity = 131/261 (50.19%), Postives = 184/261 (70.50%), Query Frame = 0


Query: 20  LSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLG-PNAT 79
           L++ A RLEGK+ALITG ASGIG+ TA  F  +GAKV +ADV++ELG +  + +G  N+T
Sbjct: 8   LTAIARRLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEAIGTSNST 67

Query: 80  FIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVR 139
           +I CDV+NE  V +AVD  +S + +LDIM++NAGI+    P I+D + A F++V ++NV 
Sbjct: 68  YIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFERVFSVNVT 127

Query: 140 GVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKY 199
           GV   +KHA+RVMIP +SG+I+ TAS++  MGG + H Y  SK AV G+ +++A EL ++
Sbjct: 128 GVFLCMKHAARVMIPARSGNIISTASLSSTMGGGSSHAYCGSKHAVLGLTRNLAVELGQF 187

Query: 200 GIRVNCISPFAIPTPFSINEMCRFFPGTE-KEKLEKMIFDLSALEGAVCETNDIANAALY 259
           GIRVNC+SPF +PT        + F G + +E+ E +I     L+G      D+ANAALY
Sbjct: 188 GIRVNCLSPFGLPTALG-----KKFSGIKNEEEFENVINFAGNLKGPKFNVEDVANAALY 247

Query: 260 LASDDAKYVSGHNLVVDGGFT 279
           LASD+AKYVSGHNL +DGGF+
Sbjct: 248 LASDEAKYVSGHNLFIDGGFS 263

[Close]

BLAST of Carg08459-RA vs. Swiss-Prot
Match: sp|Q9SCU0|SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-61
Identity = 133/265 (50.19%), Postives = 172/265 (64.91%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQL-----GPNATFI 85
           RLEGK+A+ITG A GIGKAT   F  +GA VV+ADV+   G + AK L      P   FI
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query: 86  PCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTP--PSILDLDLAVFDKVMNINVR 145
            CDVS EA+V + V+  ++ + RLDI++NNAG+  +     SILD D   FD VM +NVR
Sbjct: 91  SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query: 146 GVLAGIKHASRVMIPQQ-SGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCK 205
           GV  G+KH +R MI +   G I+ TASV GVMGG+  H Y+ SK A+ G+ K+ A EL K
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query: 206 YGIRVNCISPFAIPTPFSINEMCRFFPG----TEKEKLEKMIFDLSALEGAVCETNDIAN 265
           YGIRVNCISPF + T   +N   +   G     + E++E+ +  L+ L+G     NDIA 
Sbjct: 211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query: 266 AALYLASDDAKYVSGHNLVVDGGFT 279
           AALYLASD++KYV+GHNLVVDGG T
Sbjct: 271 AALYLASDESKYVNGHNLVVDGGVT 295

[Close]

BLAST of Carg08459-RA vs. Swiss-Prot
Match: sp|P50160|TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-60
Identity = 125/282 (44.33%), Postives = 172/282 (60.99%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVS 85
           RL+GK+A++TG A GIG+A    F  +GA+VV+AD+++  G+A A  LGP  +F+ CDVS
Sbjct: 52  RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVS 111

Query: 86  NEANVSDAVDFALSLH-KRLDIMYNNAGI---ACNTPPSILDLDLAVFDKVMNINVRGVL 145
            E +V  AVD+ALS H  RLD+  NNAG+         SIL  D A FD+V+ +N  G  
Sbjct: 112 VEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAA 171

Query: 146 AGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIR 205
            G+KHA+R M P+++GSI+  ASV  V+GGL  H Y+ SK A+ G+ K+ A EL  +G+R
Sbjct: 172 LGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVR 231

Query: 206 VNCISPFAIPTPFSIN--------------------EMCRFFPGTEKEKLEKMIFDLSAL 265
           VNC+SPF + TP  IN                             E EK+E+++  L+ L
Sbjct: 232 VNCVSPFGVATPMLINAWRQGHDDATXXXXXXXXXXXXXXXXXXQEVEKMEEVVRGLATL 291

Query: 266 EGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRL 284
           +G      DIA A L+LASD+A+Y+SGHNLVVDGG T  + L
Sbjct: 292 KGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 333

[Close]

BLAST of Carg08459-RA vs. Swiss-Prot
Match: sp|H9BFQ0|TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.1e-58
Identity = 122/256 (47.66%), Postives = 172/256 (67.19%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVS 85
           RLEGK+A+ITG ASGIG  TA  F  NGAKVV+AD++++LGQA A +LG  A +I CDVS
Sbjct: 10  RLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVS 69

Query: 86  NEANVSDAVDFALSLHKRLDIMYNNAGI--ACNTPPSILDLDLAVFDKVMNINVRGVLAG 145
            E +V + VD  ++ + RLDIM+NNAGI      P S+++ + +  D+++++N+ G   G
Sbjct: 70  KEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLG 129

Query: 146 IKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVN 205
            KHA+RVM+ Q+ G IL T+S+   + GL+ H Y+ SK  V G+ K++  EL KYGIRVN
Sbjct: 130 AKHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVN 189

Query: 206 CISPFAIPTPFS-INEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDD 265
           CISP+ + T  S I+E         +E +E M+ +L  L G     + IA AAL+LASD+
Sbjct: 190 CISPYGLVTGISNISE-------ANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDE 249

Query: 266 AKYVSGHNLVVDGGFT 279
           A YVSG N+VVDGG++
Sbjct: 250 AYYVSGINMVVDGGYS 258

[Close]

BLAST of Carg08459-RA vs. Swiss-Prot
Match: sp|F1SWA0|ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-57
Identity = 121/260 (46.54%), Postives = 173/260 (66.54%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLG--PNATFIPCD 85
           RLEGK+AL+TG ASGIG++ A  FI +GAK+ + DV++ELGQ  +++LG  P+A +  CD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 86  VSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVRGVLAG 145
           V+ E +V  AVDF    +  +DIM NNAGI  +    I D D   F KV +INV GV  G
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 146 IKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVN 205
           +KHA+R+MIP+  GSI+  ASV+ V+ G   H Y+ +K AV G+ KS+A+EL ++GIRVN
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 206 CISPFAIPTPFSINEMCRFFPGTEKEK-----LEKMIFDLSALEGAVCETNDIANAALYL 265
           C+SP+A+PT  S+     + P +E ++         +   + L+G     ND+A A LYL
Sbjct: 182 CVSPYAVPTRLSM----PYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYL 241

Query: 266 ASDDAKYVSGHNLVVDGGFT 279
           A++++KYVSG NLV+DGGF+
Sbjct: 242 ATEESKYVSGLNLVIDGGFS 257

[Close]

BLAST of Carg08459-RA vs. TrEMBL
Match: tr|A0A1S3CT49|A0A1S3CT49_CUCME (secoisolariciresinol dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103504658 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 3.0e-132
Identity = 243/287 (84.67%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 6   LVRNSLTLS-FFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEE 65
           L  NSLT S FFNR  SS  GRLEGKIALITGAASGIGKATA KFISNGAKVV+AD++E+
Sbjct: 10  LFNNSLTWSFFFNRRFSSQPGRLEGKIALITGAASGIGKATAGKFISNGAKVVIADIKEK 69

Query: 66  LGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDL 125
           LGQ TAKQLGPNATFI CDV+ E+N+SDAVDF +SLHK+LDIMYNNAGIACNTPPSI DL
Sbjct: 70  LGQDTAKQLGPNATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDL 129

Query: 126 DLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAV 185
           DLAVFDKVMN+NVRGVLAGIKHASRVMIP++SGSILCTASVTG+MGGLAQHTYSVSKVAV
Sbjct: 130 DLAVFDKVMNVNVRGVLAGIKHASRVMIPRRSGSILCTASVTGLMGGLAQHTYSVSKVAV 189

Query: 186 TGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGA 245
            GIVKS+ASELC+YGIRVNCISPF IPTPF I EM + FP  E+EKLEKMIFDLSALEG 
Sbjct: 190 IGIVKSLASELCRYGIRVNCISPFPIPTPFVIEEMTQLFPSVEEEKLEKMIFDLSALEGT 249

Query: 246 VCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           VCETNDIANAALYLASDDAKYVSGHNLVVDG FTCFK LN  LPDQN
Sbjct: 250 VCETNDIANAALYLASDDAKYVSGHNLVVDGAFTCFKSLNFSLPDQN 296

[Close]

BLAST of Carg08459-RA vs. TrEMBL
Match: tr|A0A0A0KL23|A0A0A0KL23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171720 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 4.4e-131
Identity = 240/287 (83.62%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 6   LVRNSLTLS-FFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEE 65
           L  NSLT S FFNR  SS   RL+GKIALITGAASGIGKATA KFISNGAKVV+AD++E+
Sbjct: 10  LFNNSLTWSFFFNRRFSSQPARLDGKIALITGAASGIGKATAEKFISNGAKVVIADIKEK 69

Query: 66  LGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDL 125
           LGQ TAKQLGPNATFI CDV+ E+N+SDAVDF +SLHK+LDIMYNNAGIACNTPPSI DL
Sbjct: 70  LGQDTAKQLGPNATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDL 129

Query: 126 DLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAV 185
           DLAVFDKVMN+NVRGVLAG+KHASRVMIPQ+SGSILCTASVTG+MGGLAQHTYSVSKVAV
Sbjct: 130 DLAVFDKVMNVNVRGVLAGVKHASRVMIPQRSGSILCTASVTGLMGGLAQHTYSVSKVAV 189

Query: 186 TGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGA 245
            GIVKS+ASELC+YGIRVNCISPF IPTPF I EM + FP  E+ KLEKMIFDLSALEG 
Sbjct: 190 IGIVKSLASELCRYGIRVNCISPFPIPTPFVIEEMVQLFPRVEEAKLEKMIFDLSALEGT 249

Query: 246 VCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           VCETNDIANAAL+LASDDAKYVSGHNLVVDG FTCFK LN PLPDQN
Sbjct: 250 VCETNDIANAALFLASDDAKYVSGHNLVVDGAFTCFKSLNFPLPDQN 296

[Close]

BLAST of Carg08459-RA vs. TrEMBL
Match: tr|A0A0B0PRS0|A0A0B0PRS0_GOSAR (Sex determination tasselseed-2 OS=Gossypium arboreum OX=29729 GN=F383_09633 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.5e-115
Identity = 209/286 (73.08%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           +I   + R SL  SF+NR LS+  GRL+GKIALITGAASGIGKA A+KFISNGAKVV+AD
Sbjct: 9   IINGFICRASLPQSFYNRELSTQTGRLKGKIALITGAASGIGKAAAAKFISNGAKVVIAD 68

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           ++ +LGQATA +LGPNATFIPCDV+ E++VSDAVDF +S HKRLD+MYNNAG+ C TPPS
Sbjct: 69  IQHQLGQATANELGPNATFIPCDVTEESDVSDAVDFTVSKHKRLDVMYNNAGVPCYTPPS 128

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           I+DLDLA+FD+VM INVRGVLAGIKHASRVMIP ++GSILCTASVTG+MGGLAQHTYSVS
Sbjct: 129 IVDLDLAIFDRVMGINVRGVLAGIKHASRVMIPSRTGSILCTASVTGMMGGLAQHTYSVS 188

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           K AV GIVKSMA+ELC+YGIRVNCISPFA+PTPF+++EM + +P  + E+L KMI     
Sbjct: 189 KSAVIGIVKSMAAELCQYGIRVNCISPFAVPTPFTLDEMSQIYPQIDAEQLVKMIHSFGV 248

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           L  A  E  D+A+AA+YLASDDAKYVSGHNLVVDGGFT FKRL LP
Sbjct: 249 LGKATLEPGDVADAAVYLASDDAKYVSGHNLVVDGGFTSFKRLELP 294

[Close]

BLAST of Carg08459-RA vs. TrEMBL
Match: tr|A0A1U8K3W1|A0A1U8K3W1_GOSHI (zerumbone synthase-like OS=Gossypium hirsutum OX=3635 GN=LOC107913198 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.8e-114
Identity = 207/286 (72.38%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           +I   + R SL  SF+NR LS+  GRL+GKIALITGAASGIGKA A+KFISNGAKVV+AD
Sbjct: 43  IINGFICRASLPQSFYNRELSTQTGRLKGKIALITGAASGIGKAAAAKFISNGAKVVIAD 102

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           ++ +LGQATA +LGPNATFIPCDV+ E++VSDAVDF +S HKRLD+MYNNAG+ C TPPS
Sbjct: 103 IQHQLGQATANELGPNATFIPCDVTKESDVSDAVDFTISKHKRLDVMYNNAGVPCYTPPS 162

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           I+DLDLAVFD+VM INVRGVLAGIKHASRVMIP ++GSILCTASVTG+MGGL+QHTYSVS
Sbjct: 163 IVDLDLAVFDRVMGINVRGVLAGIKHASRVMIPSRTGSILCTASVTGMMGGLSQHTYSVS 222

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           K AV GIVKSMA+ELC+YGIR+NCISPFA+PTPF+++E+ + +P  + E+L KMI     
Sbjct: 223 KSAVIGIVKSMAAELCQYGIRINCISPFAVPTPFALDELSQIYPQIDAEQLVKMIHSFGV 282

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           L  A  E  D+A+AA+YLASDDAKYVSGHNLVVDGGFT FKRL LP
Sbjct: 283 LGKATLEPGDVADAAVYLASDDAKYVSGHNLVVDGGFTSFKRLELP 328

[Close]

BLAST of Carg08459-RA vs. TrEMBL
Match: tr|A0A1U8NMD7|A0A1U8NMD7_GOSHI (short-chain dehydrogenase reductase 3c-like OS=Gossypium hirsutum OX=3635 GN=LOC107949012 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.8e-114
Identity = 208/286 (72.73%), Postives = 244/286 (85.31%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           +I   + R SL   F+NR LS+  GRL+GKIALITGAASGIGKA A+KFISNGAKVV+AD
Sbjct: 9   IINGFICRASLPQCFYNRELSTQTGRLKGKIALITGAASGIGKAAAAKFISNGAKVVIAD 68

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           ++ +LGQATA +LGPNATFIPCDV+ E++VSDAVDF +S HKRLD+MYNNAG+ C TPPS
Sbjct: 69  IQHQLGQATANELGPNATFIPCDVTEESDVSDAVDFTVSKHKRLDVMYNNAGVPCYTPPS 128

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           I+DLDLA+FD+VM INVRGVLAGIKHASRVMIP ++GSILCTASVTG+MGGLAQHTYSVS
Sbjct: 129 IVDLDLAIFDRVMGINVRGVLAGIKHASRVMIPSRTGSILCTASVTGMMGGLAQHTYSVS 188

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           K AV GIVKSMA+ELC+YGIRVNCISPFA+PTPF+++EM + +P  + E+L KMI     
Sbjct: 189 KSAVIGIVKSMAAELCQYGIRVNCISPFAVPTPFTLDEMSQIYPQIDAEQLVKMIHSFGV 248

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           L  A  E  D+A+AA+YLASDDAKYVSGHNLVVDGGFT FKRL LP
Sbjct: 249 LGKATLEPGDVADAAVYLASDDAKYVSGHNLVVDGGFTSFKRLELP 294

The following BLAST results are available for this feature:

BLAST of Carg08459-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958468.1	3.7e-158	97.61	secoisolariciresinol dehydrogenase [Cucurbita moschata]	[more]
XP_023534149.1	8.3e-158	97.95	secoisolariciresinol dehydrogenase [Cucurbita pepo subsp. pepo]	[more]
XP_022995920.1	9.1e-157	97.27	secoisolariciresinol dehydrogenase [Cucurbita maxima]	[more]
XP_022154505.1	4.1e-133	84.70	secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154507.1 secoiso...	[more]
XP_008467261.1	4.6e-132	84.67	PREDICTED: secoisolariciresinol dehydrogenase [Cucumis melo]	[more]

BLAST of Carg08459-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03140.1	4.2e-103	62.72	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G26760.1	7.4e-84	55.39	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G26770.1	1.2e-81	54.68	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G51680.1	1.2e-62	50.19	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47120.1	6.5e-56	45.74	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Carg08459-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94KL7\|SILD_FORIN	1.1e-63	50.19	Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 P...	[more]
sp\|Q9SCU0\|SDR2A_ARATH	2.2e-61	50.19	Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a ...	[more]
sp\|P50160\|TS2_MAIZE	3.2e-60	44.33	Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1	[more]
sp\|H9BFQ0\|TPRL1_ERYCB	5.1e-58	47.66	Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1	[more]
sp\|F1SWA0\|ZERSY_ZINZE	1.5e-57	46.54	Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1	[more]

BLAST of Carg08459-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CT49\|A0A1S3CT49_CUCME	3.0e-132	84.67	secoisolariciresinol dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103504658 PE=4 ...	[more]
tr\|A0A0A0KL23\|A0A0A0KL23_CUCSA	4.4e-131	83.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171720 PE=4 SV=1	[more]
tr\|A0A0B0PRS0\|A0A0B0PRS0_GOSAR	7.5e-115	73.08	Sex determination tasselseed-2 OS=Gossypium arboreum OX=29729 GN=F383_09633 PE=4...	[more]
tr\|A0A1U8K3W1\|A0A1U8K3W1_GOSHI	2.8e-114	72.38	zerumbone synthase-like OS=Gossypium hirsutum OX=3635 GN=LOC107913198 PE=4 SV=1	[more]
tr\|A0A1U8NMD7\|A0A1U8NMD7_GOSHI	2.8e-114	72.73	short-chain dehydrogenase reductase 3c-like OS=Gossypium hirsutum OX=3635 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR020904	Sc_DH/Rdtase_CS
IPR002347	SDR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08459	Carg08459	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08459-RA.CDS.2	Carg08459-RA.CDS.2	CDS
Carg08459-RA.CDS.1	Carg08459-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08459-RA.exon.2	Carg08459-RA.exon.2	exon
Carg08459-RA.exon.1	Carg08459-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08459-RA	Carg08459-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 177..196 score: 34.8 coord: 157..165 score: 41.95 coord: 102..113 score: 49.05
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 31..48 score: 49.49 coord: 241..261 score: 29.9 coord: 102..113 score: 49.62 coord: 198..215 score: 39.71 coord: 151..167 score: 31.23 coord: 177..196 score: 36.45
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 18..283 e-value: 1.4E-76 score: 259.1
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 36..278 e-value: 5.8E-63 score: 212.5
None	No IPR available	PANTHER	PTHR43180	FAMILY NOT NAMED	coord: 14..289
None	No IPR available	PANTHER	PTHR43180:SF6	ALCOHOL DEHYDROGENASE-LIKE PROTEIN	coord: 14..289
IPR020904	Short-chain dehydrogenase/reductase, conserved site	PROSITE	PS00061	ADH_SHORT	coord: 164..192
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 28..279