Carg08459 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08459
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	secoisolariciresinol dehydrogenase
Location	Cucurbita_argyrosperma_scaffold_022 : 437043 .. 438001 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCGGAGTCATCTCGTAAGGAATTCGCTTACTTTGAGCTTCTTCAATAGGGGATTGTCTTCCCATGCTGGAAGGTGAGTTTGTTTATTATACTCTCTTCCAAAACCTTCAATGTTCTTGACATGGGTTAGATTTGGATTGGGATATGCAGGCTTGAAGGCAAGATTGCGCTGATTACAGGCGCAGCCAGCGGCATTGGGAAGGCAACGGCATCCAAATTCATAAGCAATGGAGCCAAAGTTGTGTTGGCGGATGTCGAGGAAGAGCTTGGCCAAGCGACGGCCAAGCAGCTTGGCCCCAACGCTACCTTCATCCCTTGTGATGTCAGCAACGAGGCCAATGTCTCTGATGCTGTAGATTTCGCTCTCTCTCTTCACAAAAGGCTTGACATAATGTACAACAATGCTGGGATTGCTTGCAATACTCCTCCAAGCATTTTGGACCTCGACCTTGCCGTATTCGATAAAGTTATGAACATTAATGTCCGAGGTGTTCTAGCTGGTATCAAGCACGCCTCTCGTGTTATGATCCCTCAACAATCAGGATCAATTTTATGCACGGCTAGTGTCACAGGAGTGATGGGTGGGTTAGCTCAACATACGTATTCTGTGTCAAAGGTCGCTGTTACCGGTATTGTCAAGTCCATGGCATCGGAGTTGTGTAAATATGGTATTCGAGTGAATTGCATATCACCATTTGCGATCCCGACACCATTTTCTATCAACGAAATGTGTCGCTTTTTTCCTGGAACTGAGAAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGGGCAGTTTGTGAGACTAATGATATAGCCAATGCCGCACTTTATCTTGCATCTGATGATGCAAAGTATGTAAGTGGGCACAATTTGGTGGTTGATGGCGGCTTTACCTGTTTCAAGAGGTTAAACTTACCTCTCCCTGATCAGAATCCAACATGA

mRNA sequence

ATGATTCGGAGTCATCTCGTAAGGAATTCGCTTACTTTGAGCTTCTTCAATAGGGGATTGTCTTCCCATGCTGGAAGGCTTGAAGGCAAGATTGCGCTGATTACAGGCGCAGCCAGCGGCATTGGGAAGGCAACGGCATCCAAATTCATAAGCAATGGAGCCAAAGTTGTGTTGGCGGATGTCGAGGAAGAGCTTGGCCAAGCGACGGCCAAGCAGCTTGGCCCCAACGCTACCTTCATCCCTTGTGATGTCAGCAACGAGGCCAATGTCTCTGATGCTGTAGATTTCGCTCTCTCTCTTCACAAAAGGCTTGACATAATGTACAACAATGCTGGGATTGCTTGCAATACTCCTCCAAGCATTTTGGACCTCGACCTTGCCGTATTCGATAAAGTTATGAACATTAATGTCCGAGGTGTTCTAGCTGGTATCAAGCACGCCTCTCGTGTTATGATCCCTCAACAATCAGGATCAATTTTATGCACGGCTAGTGTCACAGGAGTGATGGGTGGGTTAGCTCAACATACGTATTCTGTGTCAAAGGTCGCTGTTACCGGTATTGTCAAGTCCATGGCATCGGAGTTGTGTAAATATGGTATTCGAGTGAATTGCATATCACCATTTGCGATCCCGACACCATTTTCTATCAACGAAATGTGTCGCTTTTTTCCTGGAACTGAGAAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGGGCAGTTTGTGAGACTAATGATATAGCCAATGCCGCACTTTATCTTGCATCTGATGATGCAAAGTATGTAAGTGGGCACAATTTGGTGGTTGATGGCGGCTTTACCTGTTTCAAGAGGTTAAACTTACCTCTCCCTGATCAGAATCCAACATGA

Coding sequence (CDS)

ATGATTCGGAGTCATCTCGTAAGGAATTCGCTTACTTTGAGCTTCTTCAATAGGGGATTGTCTTCCCATGCTGGAAGGCTTGAAGGCAAGATTGCGCTGATTACAGGCGCAGCCAGCGGCATTGGGAAGGCAACGGCATCCAAATTCATAAGCAATGGAGCCAAAGTTGTGTTGGCGGATGTCGAGGAAGAGCTTGGCCAAGCGACGGCCAAGCAGCTTGGCCCCAACGCTACCTTCATCCCTTGTGATGTCAGCAACGAGGCCAATGTCTCTGATGCTGTAGATTTCGCTCTCTCTCTTCACAAAAGGCTTGACATAATGTACAACAATGCTGGGATTGCTTGCAATACTCCTCCAAGCATTTTGGACCTCGACCTTGCCGTATTCGATAAAGTTATGAACATTAATGTCCGAGGTGTTCTAGCTGGTATCAAGCACGCCTCTCGTGTTATGATCCCTCAACAATCAGGATCAATTTTATGCACGGCTAGTGTCACAGGAGTGATGGGTGGGTTAGCTCAACATACGTATTCTGTGTCAAAGGTCGCTGTTACCGGTATTGTCAAGTCCATGGCATCGGAGTTGTGTAAATATGGTATTCGAGTGAATTGCATATCACCATTTGCGATCCCGACACCATTTTCTATCAACGAAATGTGTCGCTTTTTTCCTGGAACTGAGAAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGGGCAGTTTGTGAGACTAATGATATAGCCAATGCCGCACTTTATCTTGCATCTGATGATGCAAAGTATGTAAGTGGGCACAATTTGGTGGTTGATGGCGGCTTTACCTGTTTCAAGAGGTTAAACTTACCTCTCCCTGATCAGAATCCAACATGA

Protein sequence

MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT

Homology

[Close]

BLAST of Carg08459 vs. NCBI nr
Match: XP_022958468.1 (secoisolariciresinol dehydrogenase [Cucurbita moschata])

HSP 1 Score: 567.0 bits (1460), Expect = 3.7e-158
Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD
Sbjct: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLH+RLDIMYNNAGIACNTPPS
Sbjct: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHRRLDIMYNNAGIACNTPPS 120

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           ILDLDLA+FDKVMNINVRGV+AGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS
Sbjct: 121 ILDLDLAIFDKVMNINVRGVVAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           KVAV GIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA
Sbjct: 181 KVAVIGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT 294
           LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDG FTCFKRLN PLPDQNP+
Sbjct: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGSFTCFKRLNFPLPDQNPS 293

[Close]

BLAST of Carg08459 vs. NCBI nr
Match: XP_023534149.1 (secoisolariciresinol dehydrogenase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.8 bits (1457), Expect = 8.3e-158
Identity = 287/293 (97.95%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           MIRSHL+RNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD
Sbjct: 1   MIRSHLLRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS
Sbjct: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS
Sbjct: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           KVAV GIVKSMASELCKYGIRVNCISPF IPTPF INEMCR FPGTEKEKLEKMIFDLSA
Sbjct: 181 KVAVIGIVKSMASELCKYGIRVNCISPFPIPTPFVINEMCRLFPGTEKEKLEKMIFDLSA 240

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT 294
           LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLN PLPDQNPT
Sbjct: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNFPLPDQNPT 293

[Close]

BLAST of Carg08459 vs. NCBI nr
Match: XP_022995920.1 (secoisolariciresinol dehydrogenase [Cucurbita maxima])

HSP 1 Score: 562.4 bits (1448), Expect = 9.1e-157
Identity = 285/293 (97.27%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           MIRSHL+RNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD
Sbjct: 1   MIRSHLLRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           VEEELGQATAKQLGPNATFIPCDVSNE+NVSDAVDFALSLHKRLDIM NNAGIACNTPPS
Sbjct: 61  VEEELGQATAKQLGPNATFIPCDVSNESNVSDAVDFALSLHKRLDIMCNNAGIACNTPPS 120

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS
Sbjct: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           KVAV GIVKSMASELCKYGIRVNCISPFAIPTPF+INEMC  FPGTEKEKLEKMIFDLSA
Sbjct: 181 KVAVIGIVKSMASELCKYGIRVNCISPFAIPTPFAINEMCHLFPGTEKEKLEKMIFDLSA 240

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQNPT 294
           LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLN PLPDQNPT
Sbjct: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNFPLPDQNPT 293

[Close]

BLAST of Carg08459 vs. NCBI nr
Match: XP_022154505.1 (secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154507.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154508.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154509.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154510.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154511.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154512.1 secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154513.1 secoisolariciresinol dehydrogenase [Momordica charantia])

HSP 1 Score: 483.8 bits (1244), Expect = 4.1e-133
Identity = 238/281 (84.70%), Postives = 262/281 (93.24%), Query Frame = 0


Query: 9   NSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQA 68
           NSLT SFFNR LSSHAGRLEGKIALITGAASGIGKATASKFI+NGAKVV+ADV+E+LG  
Sbjct: 22  NSLTQSFFNRELSSHAGRLEGKIALITGAASGIGKATASKFINNGAKVVIADVKEKLGLE 81

Query: 69  TAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAV 128
           TA+QLGPNAT++PCDV+ E++VSDAVD+ +SLHK+LDIMYNNAG+ACNTPPSI+DLDLAV
Sbjct: 82  TAEQLGPNATYVPCDVTKESDVSDAVDYTISLHKKLDIMYNNAGVACNTPPSIVDLDLAV 141

Query: 129 FDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIV 188
           FDKVMN+NVRGVL GIKHASRVMIP+QSGSILCTASVTG+MGGLAQHTYSVSKVA+ G+V
Sbjct: 142 FDKVMNVNVRGVLVGIKHASRVMIPRQSGSILCTASVTGLMGGLAQHTYSVSKVAIIGMV 201

Query: 189 KSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCET 248
           KSMASELCKYGIRVNCISPF IPTPF + EM R FP TE++KLEKMIFD  ALEG VCET
Sbjct: 202 KSMASELCKYGIRVNCISPFPIPTPFVMEEMSRLFPRTEEQKLEKMIFDTGALEGTVCET 261

Query: 249 NDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPD 290
           NDIANAALYLASDDAKYVSGHNLVVDGGFTCFK LN P+PD
Sbjct: 262 NDIANAALYLASDDAKYVSGHNLVVDGGFTCFKCLNFPVPD 302

[Close]

BLAST of Carg08459 vs. NCBI nr
Match: XP_008467261.1 (PREDICTED: secoisolariciresinol dehydrogenase [Cucumis melo])

HSP 1 Score: 480.3 bits (1235), Expect = 4.6e-132
Identity = 243/287 (84.67%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 6   LVRNSLTLS-FFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEE 65
           L  NSLT S FFNR  SS  GRLEGKIALITGAASGIGKATA KFISNGAKVV+AD++E+
Sbjct: 10  LFNNSLTWSFFFNRRFSSQPGRLEGKIALITGAASGIGKATAGKFISNGAKVVIADIKEK 69

Query: 66  LGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDL 125
           LGQ TAKQLGPNATFI CDV+ E+N+SDAVDF +SLHK+LDIMYNNAGIACNTPPSI DL
Sbjct: 70  LGQDTAKQLGPNATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDL 129

Query: 126 DLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAV 185
           DLAVFDKVMN+NVRGVLAGIKHASRVMIP++SGSILCTASVTG+MGGLAQHTYSVSKVAV
Sbjct: 130 DLAVFDKVMNVNVRGVLAGIKHASRVMIPRRSGSILCTASVTGLMGGLAQHTYSVSKVAV 189

Query: 186 TGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGA 245
            GIVKS+ASELC+YGIRVNCISPF IPTPF I EM + FP  E+EKLEKMIFDLSALEG 
Sbjct: 190 IGIVKSLASELCRYGIRVNCISPFPIPTPFVIEEMTQLFPSVEEEKLEKMIFDLSALEGT 249

Query: 246 VCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           VCETNDIANAALYLASDDAKYVSGHNLVVDG FTCFK LN  LPDQN
Sbjct: 250 VCETNDIANAALYLASDDAKYVSGHNLVVDGAFTCFKSLNFSLPDQN 296

[Close]

BLAST of Carg08459 vs. TAIR10
Match: AT4G03140.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 371.7 bits (953), Expect = 4.2e-103
Identity = 180/287 (62.72%), Postives = 232/287 (80.84%), Query Frame = 0


Query: 10  SLTLSFFNRGLSSHAG------RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEE 69
           +++ +F  +G+SS +       +LEGK+ALITG ASGIGKATA KFIS+GAKV++AD++ 
Sbjct: 55  NVSKNFLIKGISSSSSSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQP 114

Query: 70  ELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILD 129
           ++G+ T ++LGP+  + PCDV+ E+++++AVDFA+SLH +LDIMYNNAGI C TPPSI+D
Sbjct: 115 QIGRETEQELGPSCAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVD 174

Query: 130 LDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVA 189
           LDL VFDKV+N NVRGV+AGIKHA+RVMIP+ SGSI+C  SVTG+MGGLAQHTYSVSK A
Sbjct: 175 LDLNVFDKVINTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSA 234

Query: 190 VTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEG 249
           V GIV+S ASELCK+ IRVNCISPFAI T F ++EM + +PG +  +L +++     L G
Sbjct: 235 VIGIVRSTASELCKHRIRVNCISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNG 294

Query: 250 AVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQ 291
            VCE  D+ANAA+YLASDD+KYV+GHNLVVDGGFT  K L+ P PDQ
Sbjct: 295 EVCEPTDVANAAVYLASDDSKYVNGHNLVVDGGFTTVKTLDFPAPDQ 341

[Close]

BLAST of Carg08459 vs. TAIR10
Match: AT3G26760.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 307.8 bits (787), Expect = 7.4e-84
Identity = 149/269 (55.39%), Postives = 202/269 (75.09%), Query Frame = 0


Query: 21  SSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFI 80
           S+ + +LEGK+A+ITG ASGIGKATA +F+S GA+V++ D++EE G   A +LG  A F+
Sbjct: 30  STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFL 89

Query: 81  PCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACN-TPPSILDLDLAVFDKVMNINVRG 140
            CDV+ E  ++ AV+ A++ H +LD+M N+AGI+C+ +PPSI DLD+  +DKVM +NVRG
Sbjct: 90  RCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRG 149

Query: 141 VLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYG 200
            + GIKHA+R MIP  SGSILC +S++G+MGGL  H YS+SK  + G+VK++ASELCK+G
Sbjct: 150 TVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHG 209

Query: 201 IRVNCISPFAIPTPFSINEMCRFFPG--TEKEKLEKMIFDLSALEGAVCETNDIANAALY 260
           +R+NCISP  IPTP ++      F G    +E+L  ++     L+G  CE  D+A AALY
Sbjct: 210 LRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALY 269

Query: 261 LASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           LASDDAK+V+GHNLVVDGGFTCFK LNLP
Sbjct: 270 LASDDAKFVTGHNLVVDGGFTCFKSLNLP 298

[Close]

BLAST of Carg08459 vs. TAIR10
Match: AT3G26770.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-81
Identity = 146/267 (54.68%), Postives = 198/267 (74.16%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVS 85
           +LEGK+ALITG ASG+GKATAS+F+ +GA+VV+AD++ E G  TAK+LG  A F+ CDV+
Sbjct: 40  KLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCDVT 99

Query: 86  NEANVSDAVDFALSLHKRLDIMYNNAGI-ACNTPPSILDLDLAVFDKVMNINVRGVLAGI 145
            EA+++ AV+  +  + +LD+MYNNAGI    TP SI  LD+  F++VM INV GV++GI
Sbjct: 100 VEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGI 159

Query: 146 KHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVNC 205
           KHA++ MIP +SG ILCT+SV GV GGLA H+Y++SK    GIVKS ASELC++G+R+NC
Sbjct: 160 KHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRINC 219

Query: 206 ISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDDAK 265
           ISP  + TP +++ + + FP   +EKL + +  +  L+GA CE  D+A AALYLAS+D K
Sbjct: 220 ISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASNDGK 279

Query: 266 YVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           YV+GHNLVVDGG T FK    P P  +
Sbjct: 280 YVTGHNLVVDGGMTAFKIAGFPFPSDS 306

[Close]

BLAST of Carg08459 vs. TAIR10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 133/265 (50.19%), Postives = 172/265 (64.91%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQL-----GPNATFI 85
           RLEGK+A+ITG A GIGKAT   F  +GA VV+ADV+   G + AK L      P   FI
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query: 86  PCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTP--PSILDLDLAVFDKVMNINVR 145
            CDVS EA+V + V+  ++ + RLDI++NNAG+  +     SILD D   FD VM +NVR
Sbjct: 91  SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query: 146 GVLAGIKHASRVMIPQQ-SGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCK 205
           GV  G+KH +R MI +   G I+ TASV GVMGG+  H Y+ SK A+ G+ K+ A EL K
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query: 206 YGIRVNCISPFAIPTPFSINEMCRFFPG----TEKEKLEKMIFDLSALEGAVCETNDIAN 265
           YGIRVNCISPF + T   +N   +   G     + E++E+ +  L+ L+G     NDIA 
Sbjct: 211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query: 266 AALYLASDDAKYVSGHNLVVDGGFT 279
           AALYLASD++KYV+GHNLVVDGG T
Sbjct: 271 AALYLASDESKYVNGHNLVVDGGVT 295

[Close]

BLAST of Carg08459 vs. TAIR10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 214.9 bits (546), Expect = 6.5e-56
Identity = 118/258 (45.74%), Postives = 166/258 (64.34%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPN-ATFIPCDV 85
           RLEGKI +ITG ASGIG   A  F  +GAKVV+ DV+EELGQ  A  +G + A+F  CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 86  SNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVRGVLAGI 145
           +NE  V DAV F +  H +LD++++NAG+      S LD DL  FD++M +NVRG  A I
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGV-LEPLESFLDFDLERFDRIMAVNVRGAAAFI 124

Query: 146 KHASRVMIPQQS-GSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVN 205
           KHA+R M+ + + GSI+CT SV+  +GG   H Y+ SK  + G+++S   +L KYGIRVN
Sbjct: 125 KHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVN 184

Query: 206 CISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDDA 265
            ++P+A+ TP + ++          ++LE        L+G V + + +A  AL+LASDD+
Sbjct: 185 GVAPYAVATPMTSHD------EVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDS 244

Query: 266 KYVSGHNLVVDGGFTCFK 282
            Y+SG NL VDGG+T  K
Sbjct: 245 AYISGQNLAVDGGYTVVK 254

[Close]

BLAST of Carg08459 vs. Swiss-Prot
Match: sp|Q94KL7|SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-63
Identity = 131/261 (50.19%), Postives = 184/261 (70.50%), Query Frame = 0


Query: 20  LSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLG-PNAT 79
           L++ A RLEGK+ALITG ASGIG+ TA  F  +GAKV +ADV++ELG +  + +G  N+T
Sbjct: 8   LTAIARRLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEAIGTSNST 67

Query: 80  FIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVR 139
           +I CDV+NE  V +AVD  +S + +LDIM++NAGI+    P I+D + A F++V ++NV 
Sbjct: 68  YIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFERVFSVNVT 127

Query: 140 GVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKY 199
           GV   +KHA+RVMIP +SG+I+ TAS++  MGG + H Y  SK AV G+ +++A EL ++
Sbjct: 128 GVFLCMKHAARVMIPARSGNIISTASLSSTMGGGSSHAYCGSKHAVLGLTRNLAVELGQF 187

Query: 200 GIRVNCISPFAIPTPFSINEMCRFFPGTE-KEKLEKMIFDLSALEGAVCETNDIANAALY 259
           GIRVNC+SPF +PT        + F G + +E+ E +I     L+G      D+ANAALY
Sbjct: 188 GIRVNCLSPFGLPTALG-----KKFSGIKNEEEFENVINFAGNLKGPKFNVEDVANAALY 247

Query: 260 LASDDAKYVSGHNLVVDGGFT 279
           LASD+AKYVSGHNL +DGGF+
Sbjct: 248 LASDEAKYVSGHNLFIDGGFS 263

[Close]

BLAST of Carg08459 vs. Swiss-Prot
Match: sp|Q9SCU0|SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-61
Identity = 133/265 (50.19%), Postives = 172/265 (64.91%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQL-----GPNATFI 85
           RLEGK+A+ITG A GIGKAT   F  +GA VV+ADV+   G + AK L      P   FI
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query: 86  PCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTP--PSILDLDLAVFDKVMNINVR 145
            CDVS EA+V + V+  ++ + RLDI++NNAG+  +     SILD D   FD VM +NVR
Sbjct: 91  SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query: 146 GVLAGIKHASRVMIPQQ-SGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCK 205
           GV  G+KH +R MI +   G I+ TASV GVMGG+  H Y+ SK A+ G+ K+ A EL K
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query: 206 YGIRVNCISPFAIPTPFSINEMCRFFPG----TEKEKLEKMIFDLSALEGAVCETNDIAN 265
           YGIRVNCISPF + T   +N   +   G     + E++E+ +  L+ L+G     NDIA 
Sbjct: 211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query: 266 AALYLASDDAKYVSGHNLVVDGGFT 279
           AALYLASD++KYV+GHNLVVDGG T
Sbjct: 271 AALYLASDESKYVNGHNLVVDGGVT 295

[Close]

BLAST of Carg08459 vs. Swiss-Prot
Match: sp|P50160|TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-60
Identity = 125/282 (44.33%), Postives = 172/282 (60.99%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVS 85
           RL+GK+A++TG A GIG+A    F  +GA+VV+AD+++  G+A A  LGP  +F+ CDVS
Sbjct: 52  RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVS 111

Query: 86  NEANVSDAVDFALSLH-KRLDIMYNNAGI---ACNTPPSILDLDLAVFDKVMNINVRGVL 145
            E +V  AVD+ALS H  RLD+  NNAG+         SIL  D A FD+V+ +N  G  
Sbjct: 112 VEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAA 171

Query: 146 AGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIR 205
            G+KHA+R M P+++GSI+  ASV  V+GGL  H Y+ SK A+ G+ K+ A EL  +G+R
Sbjct: 172 LGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVR 231

Query: 206 VNCISPFAIPTPFSIN--------------------EMCRFFPGTEKEKLEKMIFDLSAL 265
           VNC+SPF + TP  IN                             E EK+E+++  L+ L
Sbjct: 232 VNCVSPFGVATPMLINAWRQGHDDATXXXXXXXXXXXXXXXXXXQEVEKMEEVVRGLATL 291

Query: 266 EGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRL 284
           +G      DIA A L+LASD+A+Y+SGHNLVVDGG T  + L
Sbjct: 292 KGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNL 333

[Close]

BLAST of Carg08459 vs. Swiss-Prot
Match: sp|H9BFQ0|TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.1e-58
Identity = 122/256 (47.66%), Postives = 172/256 (67.19%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLGPNATFIPCDVS 85
           RLEGK+A+ITG ASGIG  TA  F  NGAKVV+AD++++LGQA A +LG  A +I CDVS
Sbjct: 10  RLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVS 69

Query: 86  NEANVSDAVDFALSLHKRLDIMYNNAGI--ACNTPPSILDLDLAVFDKVMNINVRGVLAG 145
            E +V + VD  ++ + RLDIM+NNAGI      P S+++ + +  D+++++N+ G   G
Sbjct: 70  KEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLG 129

Query: 146 IKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVN 205
            KHA+RVM+ Q+ G IL T+S+   + GL+ H Y+ SK  V G+ K++  EL KYGIRVN
Sbjct: 130 AKHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVN 189

Query: 206 CISPFAIPTPFS-INEMCRFFPGTEKEKLEKMIFDLSALEGAVCETNDIANAALYLASDD 265
           CISP+ + T  S I+E         +E +E M+ +L  L G     + IA AAL+LASD+
Sbjct: 190 CISPYGLVTGISNISE-------ANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDE 249

Query: 266 AKYVSGHNLVVDGGFT 279
           A YVSG N+VVDGG++
Sbjct: 250 AYYVSGINMVVDGGYS 258

[Close]

BLAST of Carg08459 vs. Swiss-Prot
Match: sp|F1SWA0|ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-57
Identity = 121/260 (46.54%), Postives = 173/260 (66.54%), Query Frame = 0


Query: 26  RLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEELGQATAKQLG--PNATFIPCD 85
           RLEGK+AL+TG ASGIG++ A  FI +GAK+ + DV++ELGQ  +++LG  P+A +  CD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 86  VSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDLDLAVFDKVMNINVRGVLAG 145
           V+ E +V  AVDF    +  +DIM NNAGI  +    I D D   F KV +INV GV  G
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 146 IKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAVTGIVKSMASELCKYGIRVN 205
           +KHA+R+MIP+  GSI+  ASV+ V+ G   H Y+ +K AV G+ KS+A+EL ++GIRVN
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 206 CISPFAIPTPFSINEMCRFFPGTEKEK-----LEKMIFDLSALEGAVCETNDIANAALYL 265
           C+SP+A+PT  S+     + P +E ++         +   + L+G     ND+A A LYL
Sbjct: 182 CVSPYAVPTRLSM----PYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYL 241

Query: 266 ASDDAKYVSGHNLVVDGGFT 279
           A++++KYVSG NLV+DGGF+
Sbjct: 242 ATEESKYVSGLNLVIDGGFS 257

[Close]

BLAST of Carg08459 vs. TrEMBL
Match: tr|A0A1S3CT49|A0A1S3CT49_CUCME (secoisolariciresinol dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103504658 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 3.0e-132
Identity = 243/287 (84.67%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 6   LVRNSLTLS-FFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEE 65
           L  NSLT S FFNR  SS  GRLEGKIALITGAASGIGKATA KFISNGAKVV+AD++E+
Sbjct: 10  LFNNSLTWSFFFNRRFSSQPGRLEGKIALITGAASGIGKATAGKFISNGAKVVIADIKEK 69

Query: 66  LGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDL 125
           LGQ TAKQLGPNATFI CDV+ E+N+SDAVDF +SLHK+LDIMYNNAGIACNTPPSI DL
Sbjct: 70  LGQDTAKQLGPNATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDL 129

Query: 126 DLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAV 185
           DLAVFDKVMN+NVRGVLAGIKHASRVMIP++SGSILCTASVTG+MGGLAQHTYSVSKVAV
Sbjct: 130 DLAVFDKVMNVNVRGVLAGIKHASRVMIPRRSGSILCTASVTGLMGGLAQHTYSVSKVAV 189

Query: 186 TGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGA 245
            GIVKS+ASELC+YGIRVNCISPF IPTPF I EM + FP  E+EKLEKMIFDLSALEG 
Sbjct: 190 IGIVKSLASELCRYGIRVNCISPFPIPTPFVIEEMTQLFPSVEEEKLEKMIFDLSALEGT 249

Query: 246 VCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           VCETNDIANAALYLASDDAKYVSGHNLVVDG FTCFK LN  LPDQN
Sbjct: 250 VCETNDIANAALYLASDDAKYVSGHNLVVDGAFTCFKSLNFSLPDQN 296

[Close]

BLAST of Carg08459 vs. TrEMBL
Match: tr|A0A0A0KL23|A0A0A0KL23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171720 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 4.4e-131
Identity = 240/287 (83.62%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 6   LVRNSLTLS-FFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLADVEEE 65
           L  NSLT S FFNR  SS   RL+GKIALITGAASGIGKATA KFISNGAKVV+AD++E+
Sbjct: 10  LFNNSLTWSFFFNRRFSSQPARLDGKIALITGAASGIGKATAEKFISNGAKVVIADIKEK 69

Query: 66  LGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPSILDL 125
           LGQ TAKQLGPNATFI CDV+ E+N+SDAVDF +SLHK+LDIMYNNAGIACNTPPSI DL
Sbjct: 70  LGQDTAKQLGPNATFIHCDVTKESNISDAVDFTISLHKKLDIMYNNAGIACNTPPSISDL 129

Query: 126 DLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVSKVAV 185
           DLAVFDKVMN+NVRGVLAG+KHASRVMIPQ+SGSILCTASVTG+MGGLAQHTYSVSKVAV
Sbjct: 130 DLAVFDKVMNVNVRGVLAGVKHASRVMIPQRSGSILCTASVTGLMGGLAQHTYSVSKVAV 189

Query: 186 TGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSALEGA 245
            GIVKS+ASELC+YGIRVNCISPF IPTPF I EM + FP  E+ KLEKMIFDLSALEG 
Sbjct: 190 IGIVKSLASELCRYGIRVNCISPFPIPTPFVIEEMVQLFPRVEEAKLEKMIFDLSALEGT 249

Query: 246 VCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLPLPDQN 292
           VCETNDIANAAL+LASDDAKYVSGHNLVVDG FTCFK LN PLPDQN
Sbjct: 250 VCETNDIANAALFLASDDAKYVSGHNLVVDGAFTCFKSLNFPLPDQN 296

[Close]

BLAST of Carg08459 vs. TrEMBL
Match: tr|A0A0B0PRS0|A0A0B0PRS0_GOSAR (Sex determination tasselseed-2 OS=Gossypium arboreum OX=29729 GN=F383_09633 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.5e-115
Identity = 209/286 (73.08%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           +I   + R SL  SF+NR LS+  GRL+GKIALITGAASGIGKA A+KFISNGAKVV+AD
Sbjct: 9   IINGFICRASLPQSFYNRELSTQTGRLKGKIALITGAASGIGKAAAAKFISNGAKVVIAD 68

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           ++ +LGQATA +LGPNATFIPCDV+ E++VSDAVDF +S HKRLD+MYNNAG+ C TPPS
Sbjct: 69  IQHQLGQATANELGPNATFIPCDVTEESDVSDAVDFTVSKHKRLDVMYNNAGVPCYTPPS 128

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           I+DLDLA+FD+VM INVRGVLAGIKHASRVMIP ++GSILCTASVTG+MGGLAQHTYSVS
Sbjct: 129 IVDLDLAIFDRVMGINVRGVLAGIKHASRVMIPSRTGSILCTASVTGMMGGLAQHTYSVS 188

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           K AV GIVKSMA+ELC+YGIRVNCISPFA+PTPF+++EM + +P  + E+L KMI     
Sbjct: 189 KSAVIGIVKSMAAELCQYGIRVNCISPFAVPTPFTLDEMSQIYPQIDAEQLVKMIHSFGV 248

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           L  A  E  D+A+AA+YLASDDAKYVSGHNLVVDGGFT FKRL LP
Sbjct: 249 LGKATLEPGDVADAAVYLASDDAKYVSGHNLVVDGGFTSFKRLELP 294

[Close]

BLAST of Carg08459 vs. TrEMBL
Match: tr|A0A1U8K3W1|A0A1U8K3W1_GOSHI (zerumbone synthase-like OS=Gossypium hirsutum OX=3635 GN=LOC107913198 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.8e-114
Identity = 207/286 (72.38%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           +I   + R SL  SF+NR LS+  GRL+GKIALITGAASGIGKA A+KFISNGAKVV+AD
Sbjct: 43  IINGFICRASLPQSFYNRELSTQTGRLKGKIALITGAASGIGKAAAAKFISNGAKVVIAD 102

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           ++ +LGQATA +LGPNATFIPCDV+ E++VSDAVDF +S HKRLD+MYNNAG+ C TPPS
Sbjct: 103 IQHQLGQATANELGPNATFIPCDVTKESDVSDAVDFTISKHKRLDVMYNNAGVPCYTPPS 162

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           I+DLDLAVFD+VM INVRGVLAGIKHASRVMIP ++GSILCTASVTG+MGGL+QHTYSVS
Sbjct: 163 IVDLDLAVFDRVMGINVRGVLAGIKHASRVMIPSRTGSILCTASVTGMMGGLSQHTYSVS 222

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           K AV GIVKSMA+ELC+YGIR+NCISPFA+PTPF+++E+ + +P  + E+L KMI     
Sbjct: 223 KSAVIGIVKSMAAELCQYGIRINCISPFAVPTPFALDELSQIYPQIDAEQLVKMIHSFGV 282

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           L  A  E  D+A+AA+YLASDDAKYVSGHNLVVDGGFT FKRL LP
Sbjct: 283 LGKATLEPGDVADAAVYLASDDAKYVSGHNLVVDGGFTSFKRLELP 328

[Close]

BLAST of Carg08459 vs. TrEMBL
Match: tr|A0A1U8NMD7|A0A1U8NMD7_GOSHI (short-chain dehydrogenase reductase 3c-like OS=Gossypium hirsutum OX=3635 GN=LOC107949012 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.8e-114
Identity = 208/286 (72.73%), Postives = 244/286 (85.31%), Query Frame = 0


Query: 1   MIRSHLVRNSLTLSFFNRGLSSHAGRLEGKIALITGAASGIGKATASKFISNGAKVVLAD 60
           +I   + R SL   F+NR LS+  GRL+GKIALITGAASGIGKA A+KFISNGAKVV+AD
Sbjct: 9   IINGFICRASLPQCFYNRELSTQTGRLKGKIALITGAASGIGKAAAAKFISNGAKVVIAD 68

Query: 61  VEEELGQATAKQLGPNATFIPCDVSNEANVSDAVDFALSLHKRLDIMYNNAGIACNTPPS 120
           ++ +LGQATA +LGPNATFIPCDV+ E++VSDAVDF +S HKRLD+MYNNAG+ C TPPS
Sbjct: 69  IQHQLGQATANELGPNATFIPCDVTEESDVSDAVDFTVSKHKRLDVMYNNAGVPCYTPPS 128

Query: 121 ILDLDLAVFDKVMNINVRGVLAGIKHASRVMIPQQSGSILCTASVTGVMGGLAQHTYSVS 180
           I+DLDLA+FD+VM INVRGVLAGIKHASRVMIP ++GSILCTASVTG+MGGLAQHTYSVS
Sbjct: 129 IVDLDLAIFDRVMGINVRGVLAGIKHASRVMIPSRTGSILCTASVTGMMGGLAQHTYSVS 188

Query: 181 KVAVTGIVKSMASELCKYGIRVNCISPFAIPTPFSINEMCRFFPGTEKEKLEKMIFDLSA 240
           K AV GIVKSMA+ELC+YGIRVNCISPFA+PTPF+++EM + +P  + E+L KMI     
Sbjct: 189 KSAVIGIVKSMAAELCQYGIRVNCISPFAVPTPFTLDEMSQIYPQIDAEQLVKMIHSFGV 248

Query: 241 LEGAVCETNDIANAALYLASDDAKYVSGHNLVVDGGFTCFKRLNLP 287
           L  A  E  D+A+AA+YLASDDAKYVSGHNLVVDGGFT FKRL LP
Sbjct: 249 LGKATLEPGDVADAAVYLASDDAKYVSGHNLVVDGGFTSFKRLELP 294

The following BLAST results are available for this feature:

BLAST of Carg08459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958468.1	3.7e-158	97.61	secoisolariciresinol dehydrogenase [Cucurbita moschata]	[more]
XP_023534149.1	8.3e-158	97.95	secoisolariciresinol dehydrogenase [Cucurbita pepo subsp. pepo]	[more]
XP_022995920.1	9.1e-157	97.27	secoisolariciresinol dehydrogenase [Cucurbita maxima]	[more]
XP_022154505.1	4.1e-133	84.70	secoisolariciresinol dehydrogenase [Momordica charantia] >XP_022154507.1 secoiso...	[more]
XP_008467261.1	4.6e-132	84.67	PREDICTED: secoisolariciresinol dehydrogenase [Cucumis melo]	[more]

BLAST of Carg08459 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03140.1	4.2e-103	62.72	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G26760.1	7.4e-84	55.39	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G26770.1	1.2e-81	54.68	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G51680.1	1.2e-62	50.19	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47120.1	6.5e-56	45.74	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Carg08459 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94KL7\|SILD_FORIN	1.1e-63	50.19	Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 P...	[more]
sp\|Q9SCU0\|SDR2A_ARATH	2.2e-61	50.19	Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a ...	[more]
sp\|P50160\|TS2_MAIZE	3.2e-60	44.33	Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1	[more]
sp\|H9BFQ0\|TPRL1_ERYCB	5.1e-58	47.66	Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1	[more]
sp\|F1SWA0\|ZERSY_ZINZE	1.5e-57	46.54	Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1	[more]

BLAST of Carg08459 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CT49\|A0A1S3CT49_CUCME	3.0e-132	84.67	secoisolariciresinol dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103504658 PE=4 ...	[more]
tr\|A0A0A0KL23\|A0A0A0KL23_CUCSA	4.4e-131	83.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171720 PE=4 SV=1	[more]
tr\|A0A0B0PRS0\|A0A0B0PRS0_GOSAR	7.5e-115	73.08	Sex determination tasselseed-2 OS=Gossypium arboreum OX=29729 GN=F383_09633 PE=4...	[more]
tr\|A0A1U8K3W1\|A0A1U8K3W1_GOSHI	2.8e-114	72.38	zerumbone synthase-like OS=Gossypium hirsutum OX=3635 GN=LOC107913198 PE=4 SV=1	[more]
tr\|A0A1U8NMD7\|A0A1U8NMD7_GOSHI	2.8e-114	72.73	short-chain dehydrogenase reductase 3c-like OS=Gossypium hirsutum OX=3635 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR020904	Sc_DH/Rdtase_CS
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08459-RA	Carg08459-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 177..196 score: 34.8 coord: 157..165 score: 41.95 coord: 102..113 score: 49.05
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 31..48 score: 49.49 coord: 241..261 score: 29.9 coord: 102..113 score: 49.62 coord: 198..215 score: 39.71 coord: 151..167 score: 31.23 coord: 177..196 score: 36.45
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 18..283 e-value: 1.4E-76 score: 259.1
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 36..278 e-value: 5.8E-63 score: 212.5
None	No IPR available	PANTHER	PTHR43180	FAMILY NOT NAMED	coord: 14..289
None	No IPR available	PANTHER	PTHR43180:SF6	ALCOHOL DEHYDROGENASE-LIKE PROTEIN	coord: 14..289
IPR020904	Short-chain dehydrogenase/reductase, conserved site	PROSITE	PS00061	ADH_SHORT	coord: 164..192
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 28..279

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08459	Cla002367	Watermelon (97103) v1	carwmB0712
Carg08459	Csa5G171720	Cucumber (Chinese Long) v2	carcuB0733
Carg08459	MELO3C005403	Melon (DHL92) v3.5.1	carmeB0705
Carg08459	ClCG01G005230	Watermelon (Charleston Gray)	carwcgB0688
Carg08459	CSPI05G08110	Wild cucumber (PI 183967)	carcpiB0749
Carg08459	Cucsa.115590	Cucumber (Gy14) v1	carcgyB0795
Carg08459	CmaCh02G010180	Cucurbita maxima (Rimu)	carcmaB0999
Carg08459	CmoCh02G010330	Cucurbita moschata (Rifu)	carcmoB0971
Carg08459	Lsi09G005530	Bottle gourd (USVL1VR-Ls)	carlsiB648
Carg08459	CsGy5G005500	Cucumber (Gy14) v2	carcgybB0711
Carg08459	MELO3C005403.2	Melon (DHL92) v3.6.1	carmedB0718
Carg08459	CsaV3_5G005510	Cucumber (Chinese Long) v3	carcucB0752
Carg08459	Cla97C01G005460	Watermelon (97103) v2	carwmbB0741

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08459	Melon (DHL92) v3.5.1	carmeB0709
Carg08459	Melon (DHL92) v3.6.1	carmedB0722
Carg08459	Watermelon (Charleston Gray)	carwcgB0690
Carg08459	Watermelon (97103) v1	carwmB0710
Carg08459	Watermelon (97103) v1	carwmB0708
Carg08459	Watermelon (97103) v2	carwmbB0743
Carg08459	Wax gourd	carwgoB0831
Carg08459	Wax gourd	carwgoB0834
Carg08459	Silver-seed gourd	carcarB584
Carg08459	Cucumber (Gy14) v2	carcgybB0707
Carg08459	Cucurbita maxima (Rimu)	carcmaB0993
Carg08459	Cucurbita maxima (Rimu)	carcmaB0994
Carg08459	Cucurbita maxima (Rimu)	carcmaB0996
Carg08459	Cucurbita moschata (Rifu)	carcmoB0965
Carg08459	Cucurbita moschata (Rifu)	carcmoB0966
Carg08459	Cucurbita moschata (Rifu)	carcmoB0968
Carg08459	Cucurbita pepo (Zucchini)	carcpeB0994
Carg08459	Cucurbita pepo (Zucchini)	carcpeB0995
Carg08459	Cucurbita pepo (Zucchini)	carcpeB0998
Carg08459	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08459	Wild cucumber (PI 183967)	carcpiB0745
Carg08459	Cucumber (Chinese Long) v2	carcuB0730
Carg08459	Cucumber (Chinese Long) v3	carcucB0748