ClCG01G005230 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAAAACCATGGTAAAGGAAGAACAAGCTTCCTTATCAACTCTACTGTTTCCACCATTAAAGTGCCAACTCTTATTCTCAGATTCATCACTTTGTTTATTCTGTGAAGCATGATTCAGATCCGACTCACCTATCTCTTCAAAAATTCTCTCAATTCGAGCTTTTTCTTCAATAGGGGATTGTCTTCCCATGCAGGAAGGTGAATTGTGTATACTTCTTATTGTTTCCAATTTCATTTCTCTACTTTTTCTTTTTTCCCTCTTTATTTTTCAACCATTTTTCCCCAGTTCCTGTATAGATTTGAGCTTATATTGCAAAGTTTAGTTTCGGAAATGTTTGTGTCTAATACTTTTTTTAATTTATAAAATATGTGTGAAATTTCAATTTTAAATCTAGTAGAGCTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTAATAGGTTTTGTAAGGGACATATTCCACTTTTCTTTCCAGTTAATGAATTTATTAGTCATAAAATTGATTTTGTGTCGAATTAAACCTTAAAGTTTTAATTTTGGGTTTAGTTTGTGAATTTTAAAATAAATGTTGAATAAGGTTAAGAACTCATAAGACCCACAATTGAAAGCTCCCAAGACTATTGAATAAATAATTAAAATATTTAGGCTCCATTTGATCATCATTTAGGTCCTATTTGATAACTAAATGTTTTTGGATTTTTTGTTTCCATTTTTCTTAAGTAAAATAGTTGAATTCTTAACGATTTCAAAAACAAAAACTAAGGTTTTGAAAATTACATTTTTAATTTTCAAAAAATGACTTGGTTTTTTAAAACATTGGTAGAAAGCAAATAGCAAATCAAGAAATTTAGGAATGAGAAGGGTATTTATAGACTTAATTTTCAAAAACTAAAAACTAAATGGTTACAAAACAAGACCTTAATTTTAAATCGTTGGCTTATAATAATAAAAAAAAAAATAAAAAAAAACTTACAAACACTATTTTATTTTATAGTCTATTTTTAGGAGTGATTTAGAGACCTCCACGTTTTAAAATTTAAAAATATGTATGGTTTTCTAAATCTTTTCTAAAAAAAAAGTTTCTCATAATTTGGTTAATAATTCAAATCAATGAAAATTTTTAAAAACAAAAAACACAAAACCAAAAAATTTTTAAATCATAATTTTCAAAAACTAAAAATCAAATAGGTATCAAACGAAATCTTAGAGGGTATTTGGAAAAGTTGAGAGTTGAGAAGCATAGAGTTGTGAACTTCACTTTTTGTTTGGGCCAAGAATTTTGTAGGTCCCAATACTAAAAAAAGTGTGAACACTAGGACTTTACAACTCTCCAAATTTTATAACTTCATGAAGTTCACGACTCCACCTCTTATCCCAAATACTCCTTTAAGAGATCTATTAGACACTTTAAATCATGGACTCAAAAGTTGTCCTAGTTTTAAAATGATTTCGGGTTTGGGCACTCAGGCTTGAAGGCAAGATAGCACTGATTACAGGAGCGGCAAGTGGTATTGGAAAGGCAACTGCAGAGAAATTTATAAGTAATGGAGCCAAAGTTGTAATAGCTGACATCAAAGAAAAGCTTGGGCAAGACACAGCCAAACACTTAGGACCAAATGCAACTTTCATCCAATGTGATGTCACTAAAGAGTCCAATGTCTCTGATGCTGTAGATTTCACCCTCTCTCTTCACAAAAAGCTTGACATCATGTACAACAATGCTGGAATTGCTTGCAACACTCCTCCAAGCATCTTGGACCTCGACCTCGCCGTCTTCGACAAAGTCATGAGCATCAACGTCCGAGGAGTTTTGGCTGGTATCAAACATGCTTCTCGTGTCATGATCCCTCAACGATCAGGATCGATTCTCTGCACGGCTAGCATCACAGGACTCATGGGCGGGCTAGCTCAACACACATACTCTGTGTCAAAGGTTGCTGTCATAGGCATTGTCAAGTCGTTGGCGTCAGAGTTGTGCAAGTATGGTATTCGAGTTAATTGCATATCGCCATTTCCGATCCCGACACCATTTGTCATCGAGGAAATGACTCGGCTTTTTCCTTGTATTGAAGAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGAACAGTTTGTGAAACCAATGATATAGCTAACGCTGCCCTCTATCTTGCATCTGATGATGCCAAGTATGTAAGCGGCCACAATTTGGTGGTTGATGGAGCCTTTACTTGTTTCAAAAGTTTAAACTTTCCTATGCCTGATCAGAATTAAAACCAAGGGGATTCTTGAAAAACCCAGTTGTTTTGATCATGTGTTGGTATGATTTATACTGGAAGAAAAAGGTTAAATTATACCAAATAAATGGGATTTATTTGGACTAGTGAAGTTTAAAATTGTTTTAAAACATACGAGGAAAGCTTATTTAGGGTCGATGTCGAATTGCAAGTTTCTTTTGGA CACAAAACCATGGTAAAGGAAGAACAAGCTTCCTTATCAACTCTACTGTTTCCACCATTAAAGTGCCAACTCTTATTCTCAGATTCATCACTTTGTTTATTCTGTGAAGCATGATTCAGATCCGACTCACCTATCTCTTCAAAAATTCTCTCAATTCGAGCTTTTTCTTCAATAGGGGATTGTCTTCCCATGCAGGAAGGCTTGAAGGCAAGATAGCACTGATTACAGGAGCGGCAAGTGGTATTGGAAAGGCAACTGCAGAGAAATTTATAAGTAATGGAGCCAAAGTTGTAATAGCTGACATCAAAGAAAAGCTTGGGCAAGACACAGCCAAACACTTAGGACCAAATGCAACTTTCATCCAATGTGATGTCACTAAAGAGTCCAATGTCTCTGATGCTGTAGATTTCACCCTCTCTCTTCACAAAAAGCTTGACATCATGTACAACAATGCTGGAATTGCTTGCAACACTCCTCCAAGCATCTTGGACCTCGACCTCGCCGTCTTCGACAAAGTCATGAGCATCAACGTCCGAGGAGTTTTGGCTGGTATCAAACATGCTTCTCGTGTCATGATCCCTCAACGATCAGGATCGATTCTCTGCACGGCTAGCATCACAGGACTCATGGGCGGGCTAGCTCAACACACATACTCTGTGTCAAAGGTTGCTGTCATAGGCATTGTCAAGTCGTTGGCGTCAGAGTTGTGCAAGTATGGTATTCGAGTTAATTGCATATCGCCATTTCCGATCCCGACACCATTTGTCATCGAGGAAATGACTCGGCTTTTTCCTTGTATTGAAGAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGAACAGTTTGTGAAACCAATGATATAGCTAACGCTGCCCTCTATCTTGCATCTGATGATGCCAAGTATGTAAGCGGCCACAATTTGGTGGTTGATGGAGCCTTTACTTGTTTCAAAAGTTTAAACTTTCCTATGCCTGATCAGAATTAAAACCAAGGGGATTCTTGAAAAACCCAGTTGTTTTGATCATGTGTTGGTATGATTTATACTGGAAGAAAAAGGTTAAATTATACCAAATAAATGGGATTTATTTGGACTAGTGAAGTTTAAAATTGTTTTAAAACATACGAGGAAAGCTTATTTAGGGTCGATGTCGAATTGCAAGTTTCTTTTGGA ATGATTCAGATCCGACTCACCTATCTCTTCAAAAATTCTCTCAATTCGAGCTTTTTCTTCAATAGGGGATTGTCTTCCCATGCAGGAAGGCTTGAAGGCAAGATAGCACTGATTACAGGAGCGGCAAGTGGTATTGGAAAGGCAACTGCAGAGAAATTTATAAGTAATGGAGCCAAAGTTGTAATAGCTGACATCAAAGAAAAGCTTGGGCAAGACACAGCCAAACACTTAGGACCAAATGCAACTTTCATCCAATGTGATGTCACTAAAGAGTCCAATGTCTCTGATGCTGTAGATTTCACCCTCTCTCTTCACAAAAAGCTTGACATCATGTACAACAATGCTGGAATTGCTTGCAACACTCCTCCAAGCATCTTGGACCTCGACCTCGCCGTCTTCGACAAAGTCATGAGCATCAACGTCCGAGGAGTTTTGGCTGGTATCAAACATGCTTCTCGTGTCATGATCCCTCAACGATCAGGATCGATTCTCTGCACGGCTAGCATCACAGGACTCATGGGCGGGCTAGCTCAACACACATACTCTGTGTCAAAGGTTGCTGTCATAGGCATTGTCAAGTCGTTGGCGTCAGAGTTGTGCAAGTATGGTATTCGAGTTAATTGCATATCGCCATTTCCGATCCCGACACCATTTGTCATCGAGGAAATGACTCGGCTTTTTCCTTGTATTGAAGAGGAGAAACTTGAGAAGATGATATTTGATTTGAGTGCTTTGGAAGGAACAGTTTGTGAAACCAATGATATAGCTAACGCTGCCCTCTATCTTGCATCTGATGATGCCAAGTATGTAAGCGGCCACAATTTGGTGGTTGATGGAGCCTTTACTTGTTTCAAAAGTTTAAACTTTCCTATGCCTGATCAGAATTAA MIQIRLTYLFKNSLNSSFFFNRGLSSHAGRLEGKIALITGAASGIGKATAEKFISNGAKVVIADIKEKLGQDTAKHLGPNATFIQCDVTKESNVSDAVDFTLSLHKKLDIMYNNAGIACNTPPSILDLDLAVFDKVMSINVRGVLAGIKHASRVMIPQRSGSILCTASITGLMGGLAQHTYSVSKVAVIGIVKSLASELCKYGIRVNCISPFPIPTPFVIEEMTRLFPCIEEEKLEKMIFDLSALEGTVCETNDIANAALYLASDDAKYVSGHNLVVDGAFTCFKSLNFPMPDQN
BLAST of ClCG01G005230 vs. Swiss-Prot
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 6.6e-66 Identity = 139/274 (50.73%), Postives = 188/274 (68.61%), Query Frame = 1
BLAST of ClCG01G005230 vs. Swiss-Prot
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.6e-59 Identity = 128/283 (45.23%), Postives = 175/283 (61.84%), Query Frame = 1
BLAST of ClCG01G005230 vs. Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.0e-58 Identity = 121/282 (42.91%), Postives = 173/282 (61.35%), Query Frame = 1
BLAST of ClCG01G005230 vs. Swiss-Prot
Match: TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.3e-58 Identity = 126/256 (49.22%), Postives = 167/256 (65.23%), Query Frame = 1
BLAST of ClCG01G005230 vs. Swiss-Prot
Match: TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca PE=2 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.5e-57 Identity = 123/255 (48.24%), Postives = 166/255 (65.10%), Query Frame = 1
BLAST of ClCG01G005230 vs. TrEMBL
Match: A0A0A0KL23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G171720 PE=4 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 2.0e-146 Identity = 267/296 (90.20%), Postives = 279/296 (94.26%), Query Frame = 1
BLAST of ClCG01G005230 vs. TrEMBL
Match: M5VKD8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008509mg PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 4.8e-116 Identity = 209/275 (76.00%), Postives = 244/275 (88.73%), Query Frame = 1
BLAST of ClCG01G005230 vs. TrEMBL
Match: A0A067JCI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22022 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 8.5e-113 Identity = 206/276 (74.64%), Postives = 241/276 (87.32%), Query Frame = 1
BLAST of ClCG01G005230 vs. TrEMBL
Match: A0A061DY22_THECC (NAD(P)-binding Rossmann-fold superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_004521 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.2e-112 Identity = 198/277 (71.48%), Postives = 242/277 (87.36%), Query Frame = 1
BLAST of ClCG01G005230 vs. TrEMBL
Match: A0A067H8T3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022464mg PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 5.5e-112 Identity = 201/274 (73.36%), Postives = 240/274 (87.59%), Query Frame = 1
BLAST of ClCG01G005230 vs. TAIR10
Match: AT4G03140.1 (AT4G03140.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 380.9 bits (977), Expect = 6.9e-106 Identity = 190/300 (63.33%), Postives = 237/300 (79.00%), Query Frame = 1
BLAST of ClCG01G005230 vs. TAIR10
Match: AT3G26760.1 (AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 310.1 bits (793), Expect = 1.5e-84 Identity = 154/269 (57.25%), Postives = 198/269 (73.61%), Query Frame = 1
BLAST of ClCG01G005230 vs. TAIR10
Match: AT3G26770.1 (AT3G26770.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 302.8 bits (774), Expect = 2.4e-82 Identity = 147/274 (53.65%), Postives = 197/274 (71.90%), Query Frame = 1
BLAST of ClCG01G005230 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 229.6 bits (584), Expect = 2.6e-60 Identity = 128/283 (45.23%), Postives = 175/283 (61.84%), Query Frame = 1
BLAST of ClCG01G005230 vs. TAIR10
Match: AT2G47120.1 (AT2G47120.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 216.9 bits (551), Expect = 1.7e-56 Identity = 116/258 (44.96%), Postives = 166/258 (64.34%), Query Frame = 1
BLAST of ClCG01G005230 vs. NCBI nr
Match: gi|659073114|ref|XP_008467261.1| (PREDICTED: secoisolariciresinol dehydrogenase [Cucumis melo]) HSP 1 Score: 529.6 bits (1363), Expect = 3.4e-147 Identity = 270/296 (91.22%), Postives = 280/296 (94.59%), Query Frame = 1
BLAST of ClCG01G005230 vs. NCBI nr
Match: gi|449451801|ref|XP_004143649.1| (PREDICTED: secoisolariciresinol dehydrogenase [Cucumis sativus]) HSP 1 Score: 526.6 bits (1355), Expect = 2.9e-146 Identity = 267/296 (90.20%), Postives = 279/296 (94.26%), Query Frame = 1
BLAST of ClCG01G005230 vs. NCBI nr
Match: gi|645258643|ref|XP_008234979.1| (PREDICTED: secoisolariciresinol dehydrogenase isoform X1 [Prunus mume]) HSP 1 Score: 425.6 bits (1093), Expect = 6.9e-116 Identity = 211/275 (76.73%), Postives = 244/275 (88.73%), Query Frame = 1
BLAST of ClCG01G005230 vs. NCBI nr
Match: gi|595793293|ref|XP_007200395.1| (hypothetical protein PRUPE_ppa008509mg [Prunus persica]) HSP 1 Score: 425.6 bits (1093), Expect = 6.9e-116 Identity = 209/275 (76.00%), Postives = 244/275 (88.73%), Query Frame = 1
BLAST of ClCG01G005230 vs. NCBI nr
Match: gi|764535051|ref|XP_011458659.1| (PREDICTED: secoisolariciresinol dehydrogenase isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 424.9 bits (1091), Expect = 1.2e-115 Identity = 214/285 (75.09%), Postives = 247/285 (86.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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