Carg00372 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGAGTCGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACTGCATTTCGATGTGCGAAAGCAGCGTTTCTGATTTCTTCGTTCAAATCCTTACAGAATCGCAACCTCAGAGCATCTGTCGACGAAGAAGCGAAGGTTCTCGATGAAAATTTATGAACAGTAACTGTGCTTGTGATCGCGCACTGGTTTATTTGATTTGGATTAGTAATCAACATAAGCGATTTTGAGAAATTAAAATGTCTATTACCTTTCAGGAGAAAGAGAGACTGAGGAAAGTTGTTGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTCGGAGGAATAGGAGGATCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGCTCTTGCTGGTTATTTCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTATCTGA ATGGAGGGAGTCGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACTGCATTTCGATGTGCGAAAGCAGCGTTTCTGATTTCTTCGTTCAAATCCTTACAGAATCGCAACCTCAGAGCATCTGTCGACGAAGAAGCGAAGGAGAAAGAGAGACTGAGGAAAGTTGTTGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTCGGAGGAATAGGAGGATCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGCTCTTGCTGGTTATTTCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTATCTGA ATGGAGGGAGTCGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACTGCATTTCGATGTGCGAAAGCAGCGTTTCTGATTTCTTCGTTCAAATCCTTACAGAATCGCAACCTCAGAGCATCTGTCGACGAAGAAGCGAAGGAGAAAGAGAGACTGAGGAAAGTTGTTGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTCGGAGGAATAGGAGGATCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGCTCTTGCTGGTTATTTCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTATCTGA MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI
BLAST of Carg00372 vs. NCBI nr
Match: XP_022940284.1 (uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 uncharacterized protein LOC111788615 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 180.3 bits (456), Expect = 3.5e-42 Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Carg00372 vs. NCBI nr
Match: XP_022138206.1 (uncharacterized protein LOC111009432 [Momordica charantia]) HSP 1 Score: 144.1 bits (362), Expect = 2.8e-31 Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of Carg00372 vs. NCBI nr
Match: XP_011652624.1 (PREDICTED: uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical protein Csa_3G895820 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27 Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 0
BLAST of Carg00372 vs. NCBI nr
Match: XP_002301051.2 (uncharacterized protein LOC7495153 [Populus trichocarpa] >PNT48797.1 hypothetical protein POPTR_002G096200v3 [Populus trichocarpa]) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 52/100 (52.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Carg00372 vs. NCBI nr
Match: XP_011016400.1 (PREDICTED: uncharacterized protein LOC105119904 [Populus euphratica]) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16 Identity = 51/100 (51.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Carg00372 vs. TAIR10
Match: AT1G78172.1 (unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 2.9e-06 Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of Carg00372 vs. TrEMBL
Match: tr|A0A0A0LJY1|A0A0A0LJY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 9.4e-28 Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 0
BLAST of Carg00372 vs. TrEMBL
Match: tr|A0A2K2BG89|A0A2K2BG89_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G096200v3 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 9.7e-17 Identity = 52/100 (52.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Carg00372 vs. TrEMBL
Match: tr|M5Y778|M5Y778_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G516500 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.7e-16 Identity = 56/107 (52.34%), Postives = 80/107 (74.77%), Query Frame = 0
BLAST of Carg00372 vs. TrEMBL
Match: tr|A0A061FG14|A0A061FG14_THECC (Retrotransposon-derived protein PEG10, putative OS=Theobroma cacao OX=3641 GN=TCM_034908 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15 Identity = 50/101 (49.50%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of Carg00372 vs. TrEMBL
Match: tr|A0A2I4HFE6|A0A2I4HFE6_9ROSI (uncharacterized protein LOC109016994 OS=Juglans regia OX=51240 GN=LOC109016994 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 9.1e-15 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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