Carg27781 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTCCGTCCGTCCATCCATCCGTCCGTCCATCCATCCATCCATTGTTTCTCTTTCTCTCTCTCTCTCTCATTTCTCTCATTTTCCTGTTGCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA ATGGATGATTCCTCACATTTTGAACTTAAGATCAGCCCTACCAGAGAGGATGATCCTTCCTCAACCTTTGAGCTTCACTTGCTCAAGACCACTTCCACTCATTCTTTCTTCTCTGATGAAACCAATTCCATGTTCCTTCTCACTGCCAAACTCCCAGGTTTTGCAAGAGACGACATTGTGGTAACTATCAATGGAAGCGGTACTCGGATCGAGATAAGTTGGGGACAACCTGTTCAGAAAATGGAGATTACGAGATGGACGTACAAGAAAGAAACAGAGACAAGGAGGTTCAAGAAGATCTTTCGAATTCCAGATGGTGTGATTTTGGATGAAATCAAGGCCACTTATAATGATGAAAAGTCCATTTTGAAGATTTTGATGCCCAAATTGGAGGAGGGGATCCTTGGAGTAGGAATTCAAGAAGTGAAGGAAAAGGAAGCTGGCGAAGCCACATTTGAATCTCAGGATTCTGAAGCTGAGGCGATTCCACATACACCTACAGACCTTGAGACTCCGGAAACGGGCAAAGAGACCAAATTAATTGAAGATACTCATGGAAATGGAGAACTTGGAGGAGAAAATGCCAAGCGGGAAGCATTTTCCAAGATGGAATATGCAGCAGAAACAACCCCAGAAGAGATCGAGAAGCTGAAAGGCAATGAGATGGAAGATACTGATGGAGGTTCCAATGACTACTCTGAAAGTGAACGACTAGAAACAGGAGCAACAAAAGCTACAGAGTATGAGGGCACAAAAGAAAATATTAATGGACAAATAAAGGTCCCTAAAGTTACAATTACGGAAGGAATAGAAGTAGCGGAAGGAACATCACAAGAAACAGCCAATCATCAAAAAGAAAAAGAAGGCAATGCTGAAGAACATAATGGTGATATGGCAACCATGATAAAAAAGAAACCAGATGTCAAAACACAACCACAAGCTTCAATTGATCAAGAGCAGGAAAATTTTAAGCGAAATCGACATACTCGAGTGGAGCTGGGGAAGCCGGAAACATATAGAAACACTTGGAAATTGAAAGAACCTGAAGATATAGAAATTCCATATTTGCAAAGCCCTGCACACGAGCATGAAGAAAAAGAAGTTGATCAAAAAGGAAAAAGTTTCCAAACAAAAGATGAAACTAAAGAAGCAAGAGAAGAATGCAATTCACCACAAAAGGTGACACATCAAGATTCGAGCAAGGAGGCAAAGCAAGAGAAGAAACAGTTTAAAATGCGTATTCCAATCATCGTTGCAGGGTCAGCTCTTGTCGCAACCCTTGTAATAGCTGTGTTTAGCTTGGTAAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA MDDSSHFELKISPTREDDPSSTFELHLLKTTSTHSFFSDETNSMFLLTAKLPGFARDDIVVTINGSGTRIEISWGQPVQKMEITRWTYKKETETRRFKKIFRIPDGVILDEIKATYNDEKSILKILMPKLEEGILGVGIQEVKEKEAGEATFESQDSEAEAIPHTPTDLETPETGKETKLIEDTHGNGELGGENAKREAFSKMEYAAETTPEEIEKLKGNEMEDTDGGSNDYSESERLETGATKATEYEGTKENINGQIKVPKVTITEGIEVAEGTSQETANHQKEKEGNAEEHNGDMATMIKKKPDVKTQPQASIDQEQENFKRNRHTRVELGKPETYRNTWKLKEPEDIEIPYLQSPAHEHEEKEVDQKGKSFQTKDETKEAREECNSPQKVTHQDSSKEAKQEKKQFKMRIPIIVAGSALVATLVIAVFSLVKSKKREKNMRG
BLAST of Carg27781 vs. NCBI nr
Match: XP_023521223.1 (neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo] >XP_023522087.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 789.3 bits (2037), Expect = 7.0e-225 Identity = 423/446 (94.84%), Postives = 433/446 (97.09%), Query Frame = 0
BLAST of Carg27781 vs. NCBI nr
Match: XP_022926215.1 (neurofilament medium polypeptide-like [Cucurbita moschata]) HSP 1 Score: 670.6 bits (1729), Expect = 3.6e-189 Identity = 356/388 (91.75%), Postives = 366/388 (94.33%), Query Frame = 0
BLAST of Carg27781 vs. NCBI nr
Match: XP_022981685.1 (uncharacterized protein LOC111480753 [Cucurbita maxima]) HSP 1 Score: 664.8 bits (1714), Expect = 2.0e-187 Identity = 344/367 (93.73%), Postives = 357/367 (97.28%), Query Frame = 0
BLAST of Carg27781 vs. NCBI nr
Match: XP_022143634.1 (uncharacterized protein LOC111013495 [Momordica charantia]) HSP 1 Score: 445.3 bits (1144), Expect = 2.5e-121 Identity = 276/466 (59.23%), Postives = 329/466 (70.60%), Query Frame = 0
BLAST of Carg27781 vs. NCBI nr
Match: OVA15469.1 (Alpha crystallin/Hsp20 domain [Macleaya cordata]) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-31 Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of Carg27781 vs. TAIR10
Match: AT1G76770.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 109.4 bits (272), Expect = 5.9e-24 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A200QYB7|A0A200QYB7_9MAGN (Alpha crystallin/Hsp20 domain OS=Macleaya cordata OX=56857 GN=BVC80_9039g6 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31 Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A0A0K807|A0A0A0K807_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298830 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30 Identity = 114/227 (50.22%), Postives = 138/227 (60.79%), Query Frame = 0
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A2P5DSD8|A0A2P5DSD8_PARAD (Small heat shock protein HSP OS=Parasponia andersonii OX=3476 GN=PanWU01x14_036180 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 5.8e-26 Identity = 72/139 (51.80%), Postives = 99/139 (71.22%), Query Frame = 0
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A2P4MF45|A0A2P4MF45_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_24194 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.9e-26 Identity = 82/185 (44.32%), Postives = 114/185 (61.62%), Query Frame = 0
BLAST of Carg27781 vs. TrEMBL
Match: tr|A0A2K2BEM4|A0A2K2BEM4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G067700v3 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25 Identity = 137/474 (28.90%), Postives = 227/474 (47.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |