Carg12103-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12103-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Apo protein 3, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_037 : 1244202 .. 1246792 (-)
Sequence length	1212

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCCGCCCCTCAGCCGTCTGCCGTCCTCCGCTTCCTCTCTTCGCCGTCAGATGTCGGCTTCAGTCACCTCCATCTGAAGGTTTCGATCGTCGCAGGAGTAAGGCCTCTCTCTCTCTCTCTCTCTCTCTGCTTTCATCTTTAGTTACTGTCAAATTTACTCAACCGGATCAATGTTCTGAACAATAACTAATTTGCTATGTTTGATGCTTTATGGACAAATCAAATGCTAATTGTAATCTTGTAGTACAAACAGTAGCTGAGAACAATGCTAATTCTAATTCGCCTCGCTTTTTCCTGCTTTGGTTGGGACTAATGCTATATCACAGTTAGAAATTACAGAACATTAGCGTCGTGTTAGCGTTTTTCAGTTGTTTTAAAACCTTGGAAGCTAGTTTTGAATTGTTCACACTCGCAGTGTACACATGGTTTTGTACTCTGTATTTGAAGAGCTAGGATTTTCTTTTTGTTCTTATAATCTGGTTAGATACCTCTAATGTCTTGACTTGAGTGCATTTTCTTTTCTCAACTTATGGAATTAGTACTTGTCTGAATTGTACTAGCCTGCAAGATTGATGAGCATGAAAACTTCTCTGTTTTAAATGTTTTTAATTGATCTTTGTTGGTTTGTGTAGTTCATGTAGATCAATACGTACACTTCCAATGTTTCGTAGAAGAATACAGAAATTTGCTGCAAACTTGACGAATTCAAGCAAGCATCCATTTCTATGGTATTCAACAAGGTCTAGTTCTGCAGTGTTATTTCAGAAGCTAAAGAAGTCAGAGAGGAAGCCACTGGTAACGAGTATAAACGAGCTGAAGCGTACAGCAAGACTGAGAGCGAAAGCGAAGCAGAATGTAGAGGAAAACTCTTTGCAGCCCCCGGCCAATGGCTTGCTGGTCAAGGGCTTGGTTCCAATTGCTCATGAAGTTTATGCTGCAAGATCTGAACTATTTTCATGCATTTCCACGGTGATTAAGAGAAGCATCGTGCATTCTTGCAGGTAAGATACAAATTGTGAGATTACACATCAAACATTCTTTATAAGGGCGTGGAAACCTCTCCCTGATAGACGTGTTTTAAAAATCTGCCCAAAAGGCAAAGCCCAAAGAGGACAATATCTGCTCACAGTGGGCTTGAACCGTTACAAATGGTATCAGAGCCAGACATCGGGCGATGTGCCAACGAGGAGGTTGAGCCCCGTAAGAGGTGGACACGAGGGGGTGTTCACATAAGAGTCATAAATTGATTATTATTTATCCCCCAAAACTATATTTCAGCTGCACAACAAGGATCTTAATTTCTTATTGATCTTGTTTTCTCATTTGTGTAGAGTCTGTGGAGAGGTTCATATTGGTCATCCGCCACATAAGATTAGAACATGTAATGTTGCTGGGAGCGCACCAAACAAAGAGCACACTTGGGAAATTGGAGGCATTCAGCATGTCTTTCCTACTGTGGAATCTTTCCATTTATATGACCGTATTGGCAGAGCTGTTTCACATAATGAGCAGCTCCAGGTGGATCGAATTCCAGCAGTAGTAGAATTGTGCATTCAAGCTGGTGTTGATATCCCCGAGTACCCTACAAGGCGAAGGACGTTTCCGATTTACAATGTCGCTGGAAGGACTGTCGACTTTGAGAAGAGGTTTCCCAAGAAATTCACCCTTGAAAAAGGCATTAATTCGTATGGATTTTGGAATGATAGGAAAACGGTGTGCGTGGACACGTTATCGATAAATTCCGATGATTTAAAAGGTCAGTATTGTTTGCACTTCTAGTTTCCACCATTCTCTATTGAATTTTACCTGTCCAGGCTATATGATATTACCTGTCCACTATTAAAAAAAAAATTGGGATTTAATTTTGATTGGAATGCGATTAGGACAGAATTAGGGTATTAAGTGGATATTAGTAATAAGATAGGAAAGTTGTTCAAAGGTCGAGAATTGCTTAGGAGCTTTAAGCTTGAGGAGCATACTCAAGAGAAGAGGAGGTTAACCGCACTTGCCCAAGTCTACCGTTAACAGATATTTAAAACGTTGATGCTAGGGAGAGATTACCACACCCATGTTCCACTCTCAGAATCTCACGGAATATCCGACTTTTATATTTCAACCTCCTATTCATGTCTCTGATTTTGCACTGAACTGTAATTTGGTGTCCATAACATTTCAGAGACAGCCATCAAAGGCATGGAATCATGGGATAAAATGATATCAGGAACAGAAAAGCTCATGAAAACGTATGGTGTACAAACATGCGGCTATTGTTCAGAGGTGCAAGTTGGACCCAAAGGCCACCGGGTTAGGAACTGTCAAGCTTACAAGCACCAGATGAGGGACGGGCAACATGCGTGGCAGGAAGCAACAGTAGATGATTTGATGCCTCCGGTGTATGTGTGGCATGTTCAAGATGTGCATAGCAATGAGCCTCTATTGAACAACCTGAAGAGGTACTATGGCGTGTTGCCTGCGGTGGTGGAGTTGTTTGCTCAAGCCGGAGCTAATGTGGGCGAGAGATACACAAGCTTCATGAAGAAAGATGTAGTAGTGCCCGAGTTGGATGAAATCAATTTGGTTGTTTAG

mRNA sequence

ATGAAAGCCGCCCCTCAGCCGTCTGCCGTCCTCCGCTTCCTCTCTTCGCCGTCAGATGTCGGCTTCAGTCACCTCCATCTGAAGGTTTCGATCGTCGCAGGAATACCTCTAATTTCATGTAGATCAATACGTACACTTCCAATGTTTCGTAGAAGAATACAGAAATTTGCTGCAAACTTGACGAATTCAAGCAAGCATCCATTTCTATGGTATTCAACAAGGTCTAGTTCTGCAGTGTTATTTCAGAAGCTAAAGAAGTCAGAGAGGAAGCCACTGGTAACGAGTATAAACGAGCTGAAGCGTACAGCAAGACTGAGAGCGAAAGCGAAGCAGAATGTAGAGGAAAACTCTTTGCAGCCCCCGGCCAATGGCTTGCTGGTCAAGGGCTTGGTTCATATTGGTCATCCGCCACATAAGATTAGAACATGTAATGTTGCTGGGAGCGCACCAAACAAAGAGCACACTTGGGAAATTGGAGGCATTCAGCATGTCTTTCCTACTGTGGAATCTTTCCATTTATATGACCGTATTGGCAGAGCTGTTTCACATAATGAGCAGCTCCAGGTGGATCGAATTCCAGCAGTAGTAGAATTGTGCATTCAAGCTGGTGTTGATATCCCCGAGTACCCTACAAGGCGAAGGACGTTTCCGATTTACAATGTCGCTGGAAGGACTGTCGACTTTGAGAAGAGGTTTCCCAAGAAATTCACCCTTGAAAAAGGCATTAATTCGTATGGATTTTGGAATGATAGGAAAACGGTGTGCGTGGACACGTTATCGATAAATTCCGATGATTTAAAAGAGACAGCCATCAAAGGCATGGAATCATGGGATAAAATGATATCAGGAACAGAAAAGCTCATGAAAACGTATGGTGTACAAACATGCGGCTATTGTTCAGAGGTGCAAGTTGGACCCAAAGGCCACCGGGTTAGGAACTGTCAAGCTTACAAGCACCAGATGAGGGACGGGCAACATGCGTGGCAGGAAGCAACAGTAGATGATTTGATGCCTCCGGTGTATGTGTGGCATGTTCAAGATGTGCATAGCAATGAGCCTCTATTGAACAACCTGAAGAGGTACTATGGCGTGTTGCCTGCGGTGGTGGAGTTGTTTGCTCAAGCCGGAGCTAATGTGGGCGAGAGATACACAAGCTTCATGAAGAAAGATGTAGTAGTGCCCGAGTTGGATGAAATCAATTTGGTTGTTTAG

Coding sequence (CDS)

ATGAAAGCCGCCCCTCAGCCGTCTGCCGTCCTCCGCTTCCTCTCTTCGCCGTCAGATGTCGGCTTCAGTCACCTCCATCTGAAGGTTTCGATCGTCGCAGGAATACCTCTAATTTCATGTAGATCAATACGTACACTTCCAATGTTTCGTAGAAGAATACAGAAATTTGCTGCAAACTTGACGAATTCAAGCAAGCATCCATTTCTATGGTATTCAACAAGGTCTAGTTCTGCAGTGTTATTTCAGAAGCTAAAGAAGTCAGAGAGGAAGCCACTGGTAACGAGTATAAACGAGCTGAAGCGTACAGCAAGACTGAGAGCGAAAGCGAAGCAGAATGTAGAGGAAAACTCTTTGCAGCCCCCGGCCAATGGCTTGCTGGTCAAGGGCTTGGTTCATATTGGTCATCCGCCACATAAGATTAGAACATGTAATGTTGCTGGGAGCGCACCAAACAAAGAGCACACTTGGGAAATTGGAGGCATTCAGCATGTCTTTCCTACTGTGGAATCTTTCCATTTATATGACCGTATTGGCAGAGCTGTTTCACATAATGAGCAGCTCCAGGTGGATCGAATTCCAGCAGTAGTAGAATTGTGCATTCAAGCTGGTGTTGATATCCCCGAGTACCCTACAAGGCGAAGGACGTTTCCGATTTACAATGTCGCTGGAAGGACTGTCGACTTTGAGAAGAGGTTTCCCAAGAAATTCACCCTTGAAAAAGGCATTAATTCGTATGGATTTTGGAATGATAGGAAAACGGTGTGCGTGGACACGTTATCGATAAATTCCGATGATTTAAAAGAGACAGCCATCAAAGGCATGGAATCATGGGATAAAATGATATCAGGAACAGAAAAGCTCATGAAAACGTATGGTGTACAAACATGCGGCTATTGTTCAGAGGTGCAAGTTGGACCCAAAGGCCACCGGGTTAGGAACTGTCAAGCTTACAAGCACCAGATGAGGGACGGGCAACATGCGTGGCAGGAAGCAACAGTAGATGATTTGATGCCTCCGGTGTATGTGTGGCATGTTCAAGATGTGCATAGCAATGAGCCTCTATTGAACAACCTGAAGAGGTACTATGGCGTGTTGCCTGCGGTGGTGGAGTTGTTTGCTCAAGCCGGAGCTAATGTGGGCGAGAGATACACAAGCTTCATGAAGAAAGATGTAGTAGTGCCCGAGTTGGATGAAATCAATTTGGTTGTTTAG

Protein sequence

MKAAPQPSAVLRFLSSPSDVGFSHLHLKVSIVAGIPLISCRSIRTLPMFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLLVKGLVHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEINLVV

Homology

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BLAST of Carg12103-RA vs. NCBI nr
Match: XP_022960063.1 (APO protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 705.3 bits (1819), Expect = 1.2e-199
Identity = 350/391 (89.51%), Postives = 352/391 (90.03%), Query Frame = 0


Query: 48  MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 107
           MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA
Sbjct: 1   MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 60

Query: 108 KAKQNVEENSLQPPANGLLVKGL-----------------------------------VH 167
           KAKQNVEENSLQPPANGL VKGL                                   VH
Sbjct: 61  KAKQNVEENSLQPPANGLPVKGLVPIAHEVYAARSELFSCISTVIKRSIVHSCRVCGEVH 120

Query: 168 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 227
           IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI
Sbjct: 121 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 180

Query: 228 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRK 287
           PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWND+K
Sbjct: 181 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDKK 240

Query: 288 TVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 347
            VC DTLSINSDDLKETAIKGME WDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR
Sbjct: 241 RVCADTLSINSDDLKETAIKGMELWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 300

Query: 348 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 404
           NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHS+EPLLNNLKRYYGVLPAVVELF
Sbjct: 301 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSSEPLLNNLKRYYGVLPAVVELF 360

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BLAST of Carg12103-RA vs. NCBI nr
Match: XP_023514040.1 (APO protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 702.6 bits (1812), Expect = 7.8e-199
Identity = 349/391 (89.26%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 48  MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 107
           MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKR ARLR 
Sbjct: 1   MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRAARLRL 60

Query: 108 KAKQNVEENSLQPPANGLLVKGL-----------------------------------VH 167
           KAKQNVEENSLQPPANGLLVKGL                                   VH
Sbjct: 61  KAKQNVEENSLQPPANGLLVKGLVPIAHEVYAARSELFSCISTVIKRSIVHSCRVCGEVH 120

Query: 168 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 227
           IG PPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI
Sbjct: 121 IGDPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 180

Query: 228 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRK 287
           PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWND+K
Sbjct: 181 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDKK 240

Query: 288 TVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 347
            VC DTLSINSDDLKETAIKGME WDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR
Sbjct: 241 RVCADTLSINSDDLKETAIKGMELWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 300

Query: 348 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 404
           NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF
Sbjct: 301 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 360

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BLAST of Carg12103-RA vs. NCBI nr
Match: XP_023004574.1 (APO protein 3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 1.6e-196
Identity = 345/391 (88.24%), Postives = 349/391 (89.26%), Query Frame = 0


Query: 48  MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 107
           MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKR ARLRA
Sbjct: 1   MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRAARLRA 60

Query: 108 KAKQNVEENSLQPPANGLLVKGL-----------------------------------VH 167
           KAKQNVEENSLQPPANGLLVKGL                                   VH
Sbjct: 61  KAKQNVEENSLQPPANGLLVKGLVPIAHEVYAARSELFSCISTVIKRSIVHCCRVCGEVH 120

Query: 168 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 227
           IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI
Sbjct: 121 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 180

Query: 228 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRK 287
           PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRT+DFEKRFPKKF LEKGINSYGFWND+K
Sbjct: 181 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTIDFEKRFPKKFILEKGINSYGFWNDKK 240

Query: 288 TVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 347
           TVCVDTLS NSDDLK TAI+GME WDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHR R
Sbjct: 241 TVCVDTLSKNSDDLKVTAIQGMELWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRAR 300

Query: 348 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 404
           NCQAYKHQMRDGQHAWQEATVDDLMP VYVWHVQDVHS+EPLLNNLKRYYGVLPAVVELF
Sbjct: 301 NCQAYKHQMRDGQHAWQEATVDDLMPLVYVWHVQDVHSSEPLLNNLKRYYGVLPAVVELF 360

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BLAST of Carg12103-RA vs. NCBI nr
Match: XP_022143706.1 (APO protein 3, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 594.0 bits (1530), Expect = 3.9e-166
Identity = 294/402 (73.13%), Postives = 324/402 (80.60%), Query Frame = 0


Query: 48  MFRRRIQKF-----------AANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSI 107
           MF +R+Q F           AA LT+SSKHP LWYSTRS+S VL QKLKKSERKPLVTSI
Sbjct: 1   MFLKRLQNFVNDQELFLQSVAATLTSSSKHPSLWYSTRSNSEVLLQKLKKSERKPLVTSI 60

Query: 108 NELKRTARLRAKAKQNVEENSLQPPANGLLVKGL-------------------------- 167
           NELKR ARLR K +Q+V+E SLQPPANGLLVKGL                          
Sbjct: 61  NELKREARLRRKERQSVQEISLQPPANGLLVKGLVPIAHEVYAARSELLSCVSTVIKRSI 120

Query: 168 ---------VHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAV 227
                    VHIGHPPHKIRTCNVA SAPNKEH WEIGG+QHVFPTVESFHLYDR+GRAV
Sbjct: 121 VYYCRVCGEVHIGHPPHKIRTCNVAESAPNKEHGWEIGGLQHVFPTVESFHLYDRLGRAV 180

Query: 228 SHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKG 287
           SHNEQLQVDRIPAVVELCIQAGVDI EYPTRRR+FPIY VAGRTVDFE+RFP+  +L + 
Sbjct: 181 SHNEQLQVDRIPAVVELCIQAGVDITEYPTRRRSFPIYKVAGRTVDFERRFPRNLSLGQD 240

Query: 288 INSYGFWNDRKTVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSE 347
           IN+YGFWNDRK + V+ +S+NSDD K TA +GME WDKMI GTEKLM+TYGVQTCGYCSE
Sbjct: 241 INTYGFWNDRKRLSVNAISLNSDDFKVTAARGMELWDKMIKGTEKLMETYGVQTCGYCSE 300

Query: 348 VQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRY 404
           VQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDL+PPVYVWHVQDVH+ +PLL+NLKRY
Sbjct: 301 VQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVYVWHVQDVHTTQPLLDNLKRY 360

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BLAST of Carg12103-RA vs. NCBI nr
Match: XP_011659358.1 (PREDICTED: APO protein 3, mitochondrial [Cucumis sativus] >KGN44939.1 hypothetical protein Csa_7G397030 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 4.6e-159
Identity = 284/386 (73.58%), Postives = 307/386 (79.53%), Query Frame = 0


Query: 53  IQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQN 112
           +Q+F A  TNSS  PF+WYST  SSAVL QKLKKSERKPLV SINELKR ARLR K +Q 
Sbjct: 17  LQRFVAASTNSSNLPFVWYSTNCSSAVLLQKLKKSERKPLVKSINELKREARLRNKERQT 76

Query: 113 VEENSLQPPANGLLVKGL-----------------------------------VHIGHPP 172
           VEE SL+PPANGLLVK L                                   VHIG PP
Sbjct: 77  VEEISLKPPANGLLVKSLVPVAHEVYAAISELLSCVSTVIKRSVLYYCKVCGDVHIGDPP 136

Query: 173 HKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVE 232
           HKIRTCNVAGS PNKEHTWEIGG+QH FPTVESFHLYDRIGRAVSHNEQL+VDRI A+VE
Sbjct: 137 HKIRTCNVAGSYPNKEHTWEIGGMQHAFPTVESFHLYDRIGRAVSHNEQLEVDRITALVE 196

Query: 233 LCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVD 292
           LC+QAGVDIPEYPTRRRT PIYNVAGRT+DFEKRFPK FT++K IN+ GFW +RK    D
Sbjct: 197 LCVQAGVDIPEYPTRRRTCPIYNVAGRTIDFEKRFPKNFTMKKDINASGFWTERKKSRKD 256

Query: 293 TLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAY 352
           T+SI SDDLK TA++GM  WDKMISGTEKLM+ Y VQTCGYC EVQVGPKGHRVRNC AY
Sbjct: 257 TISIRSDDLKVTAVRGMRLWDKMISGTEKLMEKYAVQTCGYCPEVQVGPKGHRVRNCYAY 316

Query: 353 KHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGA 404
           KHQMRDGQHAWQEATVDDL+PPVYVWHVQDVHS +PL +NLKRYYGVLPAVVELFAQAGA
Sbjct: 317 KHQMRDGQHAWQEATVDDLIPPVYVWHVQDVHSTKPLSDNLKRYYGVLPAVVELFAQAGA 376

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BLAST of Carg12103-RA vs. TAIR10
Match: AT5G61930.1 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 269.2 bits (687), Expect = 4.0e-72
Identity = 155/363 (42.70%), Postives = 204/363 (56.20%), Query Frame = 0


Query: 86  KSERKPLVTSINELKRTARLRAKAKQNVEENSLQ-PPANGLLVKGL-------------- 145
           KSERKP  T + EL R A+   + ++      L+ PP NGLLV  L              
Sbjct: 53  KSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNML 112

Query: 146 ---------------------VHIGHPPHKIRTCNVAGS-APNKEHTWEIGGIQHVFPTV 205
                                VHIG   H+IRTC   GS + +  H W+ G +  V    
Sbjct: 113 LSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFP 172

Query: 206 ESFHLYDR-IGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 265
           + FHLYDR +   V H+E+  V +I AV+ELCIQAGVD+ ++P++RR+ P+Y++ GR VD
Sbjct: 173 KCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVD 232

Query: 266 FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDD--------LKETAIKGMESWDK 325
           FE            +N     N    V   T  I  DD        LKE + + MESW +
Sbjct: 233 FE-----------DVND---GNSELAVTSTTTLIQEDDRCKEEKKSLKELSFETMESWFE 292

Query: 326 MISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPP 385
           M+ G  KLM+ Y V TCGYC E+QVGPKGH+VR C+A KHQMRDG HAWQEAT+DD++ P
Sbjct: 293 MVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGP 352

Query: 386 VYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEI 403
            YVWHV+D      L N+LKR+YG  PAV+E+  Q GA V ++Y S M+ DVV P+ DE+
Sbjct: 353 TYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEV 401

[Close]

BLAST of Carg12103-RA vs. TAIR10
Match: AT1G64810.2 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 249.6 bits (636), Expect = 3.3e-66
Identity = 139/365 (38.08%), Postives = 197/365 (53.97%), Query Frame = 0


Query: 84  LKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLLVK--------------- 143
           L K+++KP      +++  AR   K  Q   E  L PP NGLLV                
Sbjct: 104 LPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKL 163

Query: 144 --------------------GLVHIGHPPHKIRTCN-VAGSAPNKEHTWEIGGIQHVFPT 203
                               G VH+ +  H IR CN    S     H+W  G I  V   
Sbjct: 164 LIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIP 223

Query: 204 VESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 263
           VES+H+YD  GR + H  + + +RIPA+VELCIQAGV+IPEYP RRRT PI  +  R +D
Sbjct: 224 VESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVID 283

Query: 264 ---FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSI-------NSDDLKETAIKGMESW 323
              + K  P+K      ++S           +DTL +         +D+ + A + M+++
Sbjct: 284 RGGYHKE-PEKPQTSSSLSS-------PLAELDTLGVFERYPPPTPEDIPKIAQETMDAY 343

Query: 324 DKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLM 383
           +K+  G  KLM+ + V+ CGYCSEV VGP GH V+ C  +KHQ RDG+H WQ+A VD++ 
Sbjct: 344 EKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVF 403

Query: 384 PPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELD 403
           PP YVWHV+D+  N PL  NL+R+YG  PA+VE+   +GA V +RY + M+ D++VP+  
Sbjct: 404 PPNYVWHVRDLKGN-PLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQ 459

[Close]

BLAST of Carg12103-RA vs. TAIR10
Match: AT5G57930.2 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 235.0 bits (598), Expect = 8.3e-62
Identity = 143/434 (32.95%), Postives = 219/434 (50.46%), Query Frame = 0


Query: 7   PSAVLRFLSSPSDVGFSHLHLKVSIVAGIPLISCRSIRTLPMFRRRIQKFAANLTNSSKH 66
           P+   RF  SPS  G S   ++ S+     ++  +  R+LP+  R               
Sbjct: 36  PNTFYRFGFSPSLQGSS---IEFSLQLNSRVVLSKERRSLPLVVR--------------- 95

Query: 67  PFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLL 126
                + R  +  L ++  + E+KP    I +L+R AR R K  ++  +  L PP NG++
Sbjct: 96  -----NDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNNKDKPKRPLPPPKNGMV 155

Query: 127 VKGLV-----------------------------------HIGHPPHKIRTCNVAGSAPN 186
           VK LV                                   H+G   H  ++C    ++  
Sbjct: 156 VKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQR 215

Query: 187 KE-HTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYP 246
           K  H W    I+ V   +E++HL+DR+G+ + H+E+  + R+PAVVELCIQ GV+IPE+P
Sbjct: 216 KGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEIPEFP 275

Query: 247 TRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDDLKETA 306
            +RR  PI  + G++ +F                         V   T   + ++    A
Sbjct: 276 AKRRRKPIIRI-GKS-EFVDAXXXXXXXXXXXXXXXXXLTELPVSEITPPSSEEETVSLA 335

Query: 307 IKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQE 366
            + +++W++M +G +KLM+ Y V+ CGYC EV VGP GH+ +NC A+KHQ R+GQH WQ 
Sbjct: 336 EETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQS 395

Query: 367 ATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKD 404
           A +DDL+PP YVWHV DV +  P+   L+ +YG  PAVVE+ AQAGA V E Y + M+ +
Sbjct: 396 AVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLE 443

[Close]

BLAST of Carg12103-RA vs. TAIR10
Match: AT3G21740.1 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 138.7 bits (348), Expect = 8.1e-33
Identity = 81/260 (31.15%), Postives = 120/260 (46.15%), Query Frame = 0


Query: 131 VHIGHPPHKIRTC-NVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQV 190
           V +G   H I TC +      N+ H W  G I  +   VES+HL++     + H E+   
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 191 DRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWN 250
           DR+PA++ELC QAG   PE                                 I  Y   +
Sbjct: 154 DRVPAILELCCQAGAIHPE--------------------------------EILQYSEIH 213

Query: 251 DRKTVC-VDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKG 310
           D   +   D  S+ + DLK      + +W+K+ +G +KL+  Y  + C  C EV VGP G
Sbjct: 214 DNPQISEEDIRSLPAGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSG 273

Query: 311 HRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAV 370
           H+ R C  +K++   G H W++A V+DL+P   VWH +       L++  + YYG  PA+
Sbjct: 274 HKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWH-RRPQDPVVLVDEGRSYYGHAPAI 320

Query: 371 VELFAQAGANVGERYTSFMK 389
           V L +  GA V  +Y   MK
Sbjct: 334 VSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Carg12103-RA vs. Swiss-Prot
Match: sp|Q9FH50|APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.2e-71
Identity = 155/363 (42.70%), Postives = 204/363 (56.20%), Query Frame = 0


Query: 86  KSERKPLVTSINELKRTARLRAKAKQNVEENSLQ-PPANGLLVKGL-------------- 145
           KSERKP  T + EL R A+   + ++      L+ PP NGLLV  L              
Sbjct: 53  KSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNML 112

Query: 146 ---------------------VHIGHPPHKIRTCNVAGS-APNKEHTWEIGGIQHVFPTV 205
                                VHIG   H+IRTC   GS + +  H W+ G +  V    
Sbjct: 113 LSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFP 172

Query: 206 ESFHLYDR-IGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 265
           + FHLYDR +   V H+E+  V +I AV+ELCIQAGVD+ ++P++RR+ P+Y++ GR VD
Sbjct: 173 KCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVD 232

Query: 266 FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDD--------LKETAIKGMESWDK 325
           FE            +N     N    V   T  I  DD        LKE + + MESW +
Sbjct: 233 FE-----------DVND---GNSELAVTSTTTLIQEDDRCKEEKKSLKELSFETMESWFE 292

Query: 326 MISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPP 385
           M+ G  KLM+ Y V TCGYC E+QVGPKGH+VR C+A KHQMRDG HAWQEAT+DD++ P
Sbjct: 293 MVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGP 352

Query: 386 VYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEI 403
            YVWHV+D      L N+LKR+YG  PAV+E+  Q GA V ++Y S M+ DVV P+ DE+
Sbjct: 353 TYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEV 401

[Close]

BLAST of Carg12103-RA vs. Swiss-Prot
Match: sp|Q9XIR4|APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.9e-65
Identity = 139/365 (38.08%), Postives = 197/365 (53.97%), Query Frame = 0


Query: 84  LKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLLVK--------------- 143
           L K+++KP      +++  AR   K  Q   E  L PP NGLLV                
Sbjct: 80  LPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKL 139

Query: 144 --------------------GLVHIGHPPHKIRTCN-VAGSAPNKEHTWEIGGIQHVFPT 203
                               G VH+ +  H IR CN    S     H+W  G I  V   
Sbjct: 140 LIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIP 199

Query: 204 VESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 263
           VES+H+YD  GR + H  + + +RIPA+VELCIQAGV+IPEYP RRRT PI  +  R +D
Sbjct: 200 VESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVID 259

Query: 264 ---FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSI-------NSDDLKETAIKGMESW 323
              + K  P+K      ++S           +DTL +         +D+ + A + M+++
Sbjct: 260 RGGYHKE-PEKPQTSSSLSS-------PLAELDTLGVFERYPPPTPEDIPKIAQETMDAY 319

Query: 324 DKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLM 383
           +K+  G  KLM+ + V+ CGYCSEV VGP GH V+ C  +KHQ RDG+H WQ+A VD++ 
Sbjct: 320 EKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVF 379

Query: 384 PPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELD 403
           PP YVWHV+D+  N PL  NL+R+YG  PA+VE+   +GA V +RY + M+ D++VP+  
Sbjct: 380 PPNYVWHVRDLKGN-PLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQ 435

[Close]

BLAST of Carg12103-RA vs. Swiss-Prot
Match: sp|Q8W4A5|APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.5e-60
Identity = 143/434 (32.95%), Postives = 219/434 (50.46%), Query Frame = 0


Query: 7   PSAVLRFLSSPSDVGFSHLHLKVSIVAGIPLISCRSIRTLPMFRRRIQKFAANLTNSSKH 66
           P+   RF  SPS  G S   ++ S+     ++  +  R+LP+  R               
Sbjct: 33  PNTFYRFGFSPSLQGSS---IEFSLQLNSRVVLSKERRSLPLVVR--------------- 92

Query: 67  PFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLL 126
                + R  +  L ++  + E+KP    I +L+R AR R K  ++  +  L PP NG++
Sbjct: 93  -----NDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNNKDKPKRPLPPPKNGMV 152

Query: 127 VKGLV-----------------------------------HIGHPPHKIRTCNVAGSAPN 186
           VK LV                                   H+G   H  ++C    ++  
Sbjct: 153 VKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQR 212

Query: 187 KE-HTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYP 246
           K  H W    I+ V   +E++HL+DR+G+ + H+E+  + R+PAVVELCIQ GV+IPE+P
Sbjct: 213 KGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEIPEFP 272

Query: 247 TRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDDLKETA 306
            +RR  PI  + G++ +F                         V   T   + ++    A
Sbjct: 273 AKRRRKPIIRI-GKS-EFVDAXXXXXXXXXXXXXXXXXLTELPVSEITPPSSEEETVSLA 332

Query: 307 IKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQE 366
            + +++W++M +G +KLM+ Y V+ CGYC EV VGP GH+ +NC A+KHQ R+GQH WQ 
Sbjct: 333 EETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQS 392

Query: 367 ATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKD 404
           A +DDL+PP YVWHV DV +  P+   L+ +YG  PAVVE+ AQAGA V E Y + M+ +
Sbjct: 393 AVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLE 440

[Close]

BLAST of Carg12103-RA vs. Swiss-Prot
Match: sp|Q9LSZ0|APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-31
Identity = 81/260 (31.15%), Postives = 120/260 (46.15%), Query Frame = 0


Query: 131 VHIGHPPHKIRTC-NVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQV 190
           V +G   H I TC +      N+ H W  G I  +   VES+HL++     + H E+   
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 191 DRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWN 250
           DR+PA++ELC QAG   PE                                 I  Y   +
Sbjct: 154 DRVPAILELCCQAGAIHPE--------------------------------EILQYSEIH 213

Query: 251 DRKTVC-VDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKG 310
           D   +   D  S+ + DLK      + +W+K+ +G +KL+  Y  + C  C EV VGP G
Sbjct: 214 DNPQISEEDIRSLPAGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSG 273

Query: 311 HRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAV 370
           H+ R C  +K++   G H W++A V+DL+P   VWH +       L++  + YYG  PA+
Sbjct: 274 HKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWH-RRPQDPVVLVDEGRSYYGHAPAI 320

Query: 371 VELFAQAGANVGERYTSFMK 389
           V L +  GA V  +Y   MK
Sbjct: 334 VSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Carg12103-RA vs. TrEMBL
Match: tr|A0A0A0K7T0|A0A0A0K7T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397030 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 3.1e-159
Identity = 284/386 (73.58%), Postives = 307/386 (79.53%), Query Frame = 0


Query: 53  IQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQN 112
           +Q+F A  TNSS  PF+WYST  SSAVL QKLKKSERKPLV SINELKR ARLR K +Q 
Sbjct: 17  LQRFVAASTNSSNLPFVWYSTNCSSAVLLQKLKKSERKPLVKSINELKREARLRNKERQT 76

Query: 113 VEENSLQPPANGLLVKGL-----------------------------------VHIGHPP 172
           VEE SL+PPANGLLVK L                                   VHIG PP
Sbjct: 77  VEEISLKPPANGLLVKSLVPVAHEVYAAISELLSCVSTVIKRSVLYYCKVCGDVHIGDPP 136

Query: 173 HKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVE 232
           HKIRTCNVAGS PNKEHTWEIGG+QH FPTVESFHLYDRIGRAVSHNEQL+VDRI A+VE
Sbjct: 137 HKIRTCNVAGSYPNKEHTWEIGGMQHAFPTVESFHLYDRIGRAVSHNEQLEVDRITALVE 196

Query: 233 LCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVD 292
           LC+QAGVDIPEYPTRRRT PIYNVAGRT+DFEKRFPK FT++K IN+ GFW +RK    D
Sbjct: 197 LCVQAGVDIPEYPTRRRTCPIYNVAGRTIDFEKRFPKNFTMKKDINASGFWTERKKSRKD 256

Query: 293 TLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAY 352
           T+SI SDDLK TA++GM  WDKMISGTEKLM+ Y VQTCGYC EVQVGPKGHRVRNC AY
Sbjct: 257 TISIRSDDLKVTAVRGMRLWDKMISGTEKLMEKYAVQTCGYCPEVQVGPKGHRVRNCYAY 316

Query: 353 KHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGA 404
           KHQMRDGQHAWQEATVDDL+PPVYVWHVQDVHS +PL +NLKRYYGVLPAVVELFAQAGA
Sbjct: 317 KHQMRDGQHAWQEATVDDLIPPVYVWHVQDVHSTKPLSDNLKRYYGVLPAVVELFAQAGA 376

[Close]

BLAST of Carg12103-RA vs. TrEMBL
Match: tr|A0A2P4K840|A0A2P4K840_QUESU (Apo protein 3, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_70918 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.0e-138
Identity = 244/387 (63.05%), Postives = 290/387 (74.94%), Query Frame = 0


Query: 54  QKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNV 113
           ++ A N    ++H   WYST SS   L  K KKSERKPLVTS+NELK  ARLR K KQ V
Sbjct: 18  ERSAENFIGINRHFCGWYSTGSSHVELPIKRKKSERKPLVTSVNELKHEARLRRKEKQMV 77

Query: 114 EENSLQPPANGLLVKGL-----------------------------------VHIGHPPH 173
           +EN+L+ P NGLLVKGL                                   VH+G PPH
Sbjct: 78  QENTLRSPENGLLVKGLVPVAHEVYAARAKLNACVSRIVKSIAIFSCSLCGEVHVGDPPH 137

Query: 174 KIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVEL 233
           +IRTC+VAGS  NKEHTWE GG++H+ P VESFHLYDR+GRAVSHNEQLQVDRIPA+VEL
Sbjct: 138 RIRTCDVAGSLKNKEHTWERGGVEHILPLVESFHLYDRLGRAVSHNEQLQVDRIPAIVEL 197

Query: 234 CIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDT 293
           C+QAG DIPEYPTRRRTFPIY++AG+ +DFE+RFPK+ T  K IN+YGFW+ +K    + 
Sbjct: 198 CVQAGFDIPEYPTRRRTFPIYSLAGKVIDFERRFPKEDTPGKDINTYGFWDKKKKSSEEN 257

Query: 294 --LSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQA 353
               ++SDD++  AI+GME+W++M SG  KLMK Y VQTCGYCSE+QVGPKGH+VRNCQA
Sbjct: 258 KFFDLHSDDVQAIAIQGMEAWERMRSGASKLMKKYAVQTCGYCSEMQVGPKGHKVRNCQA 317

Query: 354 YKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAG 404
           +KHQMRDGQHAWQEATVDDL+PPVYVWHV+D HS EPL+N LKRYYG+LPAVVELFAQAG
Sbjct: 318 FKHQMRDGQHAWQEATVDDLIPPVYVWHVRDRHSGEPLVNGLKRYYGMLPAVVELFAQAG 377

[Close]

BLAST of Carg12103-RA vs. TrEMBL
Match: tr|D7SQI0|D7SQI0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0052g00090 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 4.9e-133
Identity = 244/403 (60.55%), Postives = 290/403 (71.96%), Query Frame = 0


Query: 44  RTLPMFRRRIQKFAANLTNSS-------KHPFLWYSTRSSSAVLFQKLKKSERKPLVTSI 103
           R LP   R ++K     + +S       K PF  +ST S+   L +KLKKSERKP VTS+
Sbjct: 52  RMLPRRIRNLRKIVVQNSFASLIELGKFKLPFRSFSTNSTCKELPRKLKKSERKPWVTSV 111

Query: 104 NELKRTARLRAKAKQNVEENSLQPPANGLLVKGL-------------------------- 163
           NELK  ARL+ +A+Q V E +L+PP NGLLVKGL                          
Sbjct: 112 NELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTI 171

Query: 164 ---------VHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAV 223
                    VH+GHPPHKIRTCNV GS  +KEH WEIGG++HV P VESFHLYDR+GRAV
Sbjct: 172 IYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAV 231

Query: 224 SHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKG 283
           SHNE+LQVD+IPA+VELCIQAG+DIPEYPTRRRTFP+YNVAGR +DFE+RFPK  +  K 
Sbjct: 232 SHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGKD 291

Query: 284 INSYGFWNDRKTVCVD-TLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCS 343
           IN+YGFW  R     + ++ + +DD++  AI+GME+W+KM  G  KLM+ Y VQTCGYCS
Sbjct: 292 INAYGFWEKRNQSSENKSMHLLADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCS 351

Query: 344 EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKR 403
           EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDL+PPV+VWHV+DV    PL+N L+R
Sbjct: 352 EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQR 411

[Close]

BLAST of Carg12103-RA vs. TrEMBL
Match: tr|A0A2I4E747|A0A2I4E747_9ROSI (APO protein 3, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108986880 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 2.7e-131
Identity = 236/387 (60.98%), Postives = 284/387 (73.39%), Query Frame = 0


Query: 54  QKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNV 113
           ++ A N  +  KH    Y+T S+ + L  K KKSERKPLVTS+N+LKR ARLR K +  V
Sbjct: 18  ERSAENFIDVGKHFPACYTTGSTCSELPIKRKKSERKPLVTSVNDLKREARLRRKERLKV 77

Query: 114 EENSLQPPANGLLVKGL-----------------------------------VHIGHPPH 173
           +E  LQPP NGLLVKGL                                   VH+GHPPH
Sbjct: 78  QEVILQPPKNGLLVKGLVPVARQVYSARAKLHVCVSRVVKNIAIYTCSLCGEVHVGHPPH 137

Query: 174 KIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVEL 233
           +IRTCNVAGS  NKEH WE GGI HV P VESFHLYDRIGRAVSHNE+L+VDRIPA++EL
Sbjct: 138 RIRTCNVAGSPTNKEHKWEKGGIGHVLPVVESFHLYDRIGRAVSHNERLEVDRIPALLEL 197

Query: 234 CIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDT 293
           C+QAGVDIPEYPTRRR  PIY++AGR +DFE+RFPK+ +  K IN+YGFW+ ++ +  D 
Sbjct: 198 CVQAGVDIPEYPTRRRACPIYSLAGRVIDFERRFPKEDSPGKDINTYGFWDKKRNLNNDD 257

Query: 294 --LSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQA 353
             + ++SDD++  +++GME W+KM SG  KLM+ Y VQTCGYCSE+QVGPKGHRVRNCQA
Sbjct: 258 KFMDLHSDDIQAISVQGMEEWEKMRSGASKLMEKYAVQTCGYCSEMQVGPKGHRVRNCQA 317

Query: 354 YKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAG 404
           +KHQMRDGQHAWQEATVDDL+PPVYVWHV+D    E L+N LKRYYG+LPAVVELFAQAG
Sbjct: 318 FKHQMRDGQHAWQEATVDDLIPPVYVWHVRDGQRGELLVNGLKRYYGMLPAVVELFAQAG 377

[Close]

BLAST of Carg12103-RA vs. TrEMBL
Match: tr|A0A0S3SIL7|A0A0S3SIL7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G145800 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 230/401 (57.36%), Postives = 284/401 (70.82%), Query Frame = 0


Query: 41  RSIRTLPMFRRRIQKFA-ANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINEL 100
           R ++TL     R++    + L     H  LWYST S+   + +KL K ERKPLVTS NEL
Sbjct: 4   RHVQTLSDLLERVKLVRFSKLRGIHGHFCLWYSTLSTCNEMPKKLNKFERKPLVTSFNEL 63

Query: 101 KRTARLRAKAKQNVEENSLQPPANGLLVKGL----------------------------- 160
           KR ARL+ K +Q V E  LQPP NG+LVK L                             
Sbjct: 64  KREARLKKKERQKVHETILQPPENGMLVKNLIPVAHEVFAARCELLSCVSRLVNYTAIYV 123

Query: 161 ------VHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHN 220
                 VH+GHPPHKI+TC+V GS  +KEH+W  GG++HV P VESFHLYDRIGRAVSHN
Sbjct: 124 CSLCGEVHVGHPPHKIKTCDVRGSPSSKEHSWVKGGVEHVLPLVESFHLYDRIGRAVSHN 183

Query: 221 EQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINS 280
           E L+VDRIPA+VELC+QAG DIPEYPTRRRTFP+Y VAGR +DFEKRFPK+ +L   I +
Sbjct: 184 EMLEVDRIPAIVELCVQAGFDIPEYPTRRRTFPVYCVAGRIIDFEKRFPKEMSLGADIEA 243

Query: 281 YGFWNDRKTVCVDTLS--INSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEV 340
           +GFW+  K    DT S  ++SDD++  A+ GM++W+KM +G  KLM+ Y VQTCGYC+EV
Sbjct: 244 HGFWHKEKKFNKDTNSMVMHSDDIQAIAVLGMKAWEKMCTGASKLMEKYDVQTCGYCAEV 303

Query: 341 QVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYY 400
           QVGPKGHRVRNCQA+KHQMRDGQHAWQ+AT++DL PPV V+H++D   N+PL+N LKRYY
Sbjct: 304 QVGPKGHRVRNCQAFKHQMRDGQHAWQKATINDLAPPVCVYHIRDQQGNKPLVNELKRYY 363

Query: 401 GVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEINLVV 404
           G+LPAVVELFAQAGA VG+ Y S M++DV +PE+DE   VV
Sbjct: 364 GMLPAVVELFAQAGAPVGKNYASMMREDVAIPEMDEEKWVV 404

The following BLAST results are available for this feature:

BLAST of Carg12103-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960063.1	1.2e-199	89.51	APO protein 3, mitochondrial-like [Cucurbita moschata]	[more]
XP_023514040.1	7.8e-199	89.26	APO protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004574.1	1.6e-196	88.24	APO protein 3, mitochondrial-like [Cucurbita maxima]	[more]
XP_022143706.1	3.9e-166	73.13	APO protein 3, mitochondrial-like isoform X1 [Momordica charantia]	[more]
XP_011659358.1	4.6e-159	73.58	PREDICTED: APO protein 3, mitochondrial [Cucumis sativus] >KGN44939.1 hypothetic...	[more]

BLAST of Carg12103-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61930.1	4.0e-72	42.70	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT1G64810.2	3.3e-66	38.08	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G57930.2	8.3e-62	32.95	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT3G21740.1	8.1e-33	31.15	Arabidopsis thaliana protein of unknown function (DUF794)	[more]

BLAST of Carg12103-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FH50\|APO3_ARATH	7.2e-71	42.70	APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1	[more]
sp\|Q9XIR4\|APO1_ARATH	5.9e-65	38.08	APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1	[more]
sp\|Q8W4A5\|APO2_ARATH	1.5e-60	32.95	APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1	[more]
sp\|Q9LSZ0\|APO4_ARATH	1.5e-31	31.15	APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2	[more]

BLAST of Carg12103-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7T0\|A0A0A0K7T0_CUCSA	3.1e-159	73.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397030 PE=4 SV=1	[more]
tr\|A0A2P4K840\|A0A2P4K840_QUESU	1.0e-138	63.05	Apo protein 3, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_70918 PE=4 SV=1	[more]
tr\|D7SQI0\|D7SQI0_VITVI	4.9e-133	60.55	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0052g00090 PE=4 SV=...	[more]
tr\|A0A2I4E747\|A0A2I4E747_9ROSI	2.7e-131	60.98	APO protein 3, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108986880 PE=4...	[more]
tr\|A0A0S3SIL7\|A0A0S3SIL7_PHAAN	1.4e-127	57.36	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR023342	APO_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12103	Carg12103	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12103-RA	Carg12103-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12103-RA.CDS.5	Carg12103-RA.CDS.5	CDS
Carg12103-RA.CDS.4	Carg12103-RA.CDS.4	CDS
Carg12103-RA.CDS.3	Carg12103-RA.CDS.3	CDS
Carg12103-RA.CDS.2	Carg12103-RA.CDS.2	CDS
Carg12103-RA.CDS.1	Carg12103-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12103-RA.exon.5	Carg12103-RA.exon.5	exon
Carg12103-RA.exon.4	Carg12103-RA.exon.4	exon
Carg12103-RA.exon.3	Carg12103-RA.exon.3	exon
Carg12103-RA.exon.2	Carg12103-RA.exon.2	exon
Carg12103-RA.exon.1	Carg12103-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023342	APO domain	PFAM	PF05634	APO_RNA-bind	coord: 131..227 e-value: 3.3E-33 score: 114.7 coord: 265..381 e-value: 1.8E-23 score: 82.9 coord: 79..134 e-value: 4.9E-8 score: 32.5
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 124..208 score: 14.487
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 295..381 score: 27.542
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 130..403 coord: 45..131
None	No IPR available	PANTHER	PTHR10388:SF17	SUBFAMILY NOT NAMED	coord: 130..403 coord: 45..131