Carg12103 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12103
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Apo protein 3, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_037 : 1244202 .. 1246792 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCCGCCCCTCAGCCGTCTGCCGTCCTCCGCTTCCTCTCTTCGCCGTCAGATGTCGGCTTCAGTCACCTCCATCTGAAGGTTTCGATCGTCGCAGGAGTAAGGCCTCTCTCTCTCTCTCTCTCTCTCTGCTTTCATCTTTAGTTACTGTCAAATTTACTCAACCGGATCAATGTTCTGAACAATAACTAATTTGCTATGTTTGATGCTTTATGGACAAATCAAATGCTAATTGTAATCTTGTAGTACAAACAGTAGCTGAGAACAATGCTAATTCTAATTCGCCTCGCTTTTTCCTGCTTTGGTTGGGACTAATGCTATATCACAGTTAGAAATTACAGAACATTAGCGTCGTGTTAGCGTTTTTCAGTTGTTTTAAAACCTTGGAAGCTAGTTTTGAATTGTTCACACTCGCAGTGTACACATGGTTTTGTACTCTGTATTTGAAGAGCTAGGATTTTCTTTTTGTTCTTATAATCTGGTTAGATACCTCTAATGTCTTGACTTGAGTGCATTTTCTTTTCTCAACTTATGGAATTAGTACTTGTCTGAATTGTACTAGCCTGCAAGATTGATGAGCATGAAAACTTCTCTGTTTTAAATGTTTTTAATTGATCTTTGTTGGTTTGTGTAGTTCATGTAGATCAATACGTACACTTCCAATGTTTCGTAGAAGAATACAGAAATTTGCTGCAAACTTGACGAATTCAAGCAAGCATCCATTTCTATGGTATTCAACAAGGTCTAGTTCTGCAGTGTTATTTCAGAAGCTAAAGAAGTCAGAGAGGAAGCCACTGGTAACGAGTATAAACGAGCTGAAGCGTACAGCAAGACTGAGAGCGAAAGCGAAGCAGAATGTAGAGGAAAACTCTTTGCAGCCCCCGGCCAATGGCTTGCTGGTCAAGGGCTTGGTTCCAATTGCTCATGAAGTTTATGCTGCAAGATCTGAACTATTTTCATGCATTTCCACGGTGATTAAGAGAAGCATCGTGCATTCTTGCAGGTAAGATACAAATTGTGAGATTACACATCAAACATTCTTTATAAGGGCGTGGAAACCTCTCCCTGATAGACGTGTTTTAAAAATCTGCCCAAAAGGCAAAGCCCAAAGAGGACAATATCTGCTCACAGTGGGCTTGAACCGTTACAAATGGTATCAGAGCCAGACATCGGGCGATGTGCCAACGAGGAGGTTGAGCCCCGTAAGAGGTGGACACGAGGGGGTGTTCACATAAGAGTCATAAATTGATTATTATTTATCCCCCAAAACTATATTTCAGCTGCACAACAAGGATCTTAATTTCTTATTGATCTTGTTTTCTCATTTGTGTAGAGTCTGTGGAGAGGTTCATATTGGTCATCCGCCACATAAGATTAGAACATGTAATGTTGCTGGGAGCGCACCAAACAAAGAGCACACTTGGGAAATTGGAGGCATTCAGCATGTCTTTCCTACTGTGGAATCTTTCCATTTATATGACCGTATTGGCAGAGCTGTTTCACATAATGAGCAGCTCCAGGTGGATCGAATTCCAGCAGTAGTAGAATTGTGCATTCAAGCTGGTGTTGATATCCCCGAGTACCCTACAAGGCGAAGGACGTTTCCGATTTACAATGTCGCTGGAAGGACTGTCGACTTTGAGAAGAGGTTTCCCAAGAAATTCACCCTTGAAAAAGGCATTAATTCGTATGGATTTTGGAATGATAGGAAAACGGTGTGCGTGGACACGTTATCGATAAATTCCGATGATTTAAAAGGTCAGTATTGTTTGCACTTCTAGTTTCCACCATTCTCTATTGAATTTTACCTGTCCAGGCTATATGATATTACCTGTCCACTATTAAAAAAAAAATTGGGATTTAATTTTGATTGGAATGCGATTAGGACAGAATTAGGGTATTAAGTGGATATTAGTAATAAGATAGGAAAGTTGTTCAAAGGTCGAGAATTGCTTAGGAGCTTTAAGCTTGAGGAGCATACTCAAGAGAAGAGGAGGTTAACCGCACTTGCCCAAGTCTACCGTTAACAGATATTTAAAACGTTGATGCTAGGGAGAGATTACCACACCCATGTTCCACTCTCAGAATCTCACGGAATATCCGACTTTTATATTTCAACCTCCTATTCATGTCTCTGATTTTGCACTGAACTGTAATTTGGTGTCCATAACATTTCAGAGACAGCCATCAAAGGCATGGAATCATGGGATAAAATGATATCAGGAACAGAAAAGCTCATGAAAACGTATGGTGTACAAACATGCGGCTATTGTTCAGAGGTGCAAGTTGGACCCAAAGGCCACCGGGTTAGGAACTGTCAAGCTTACAAGCACCAGATGAGGGACGGGCAACATGCGTGGCAGGAAGCAACAGTAGATGATTTGATGCCTCCGGTGTATGTGTGGCATGTTCAAGATGTGCATAGCAATGAGCCTCTATTGAACAACCTGAAGAGGTACTATGGCGTGTTGCCTGCGGTGGTGGAGTTGTTTGCTCAAGCCGGAGCTAATGTGGGCGAGAGATACACAAGCTTCATGAAGAAAGATGTAGTAGTGCCCGAGTTGGATGAAATCAATTTGGTTGTTTAG

mRNA sequence

ATGAAAGCCGCCCCTCAGCCGTCTGCCGTCCTCCGCTTCCTCTCTTCGCCGTCAGATGTCGGCTTCAGTCACCTCCATCTGAAGGTTTCGATCGTCGCAGGAATACCTCTAATTTCATGTAGATCAATACGTACACTTCCAATGTTTCGTAGAAGAATACAGAAATTTGCTGCAAACTTGACGAATTCAAGCAAGCATCCATTTCTATGGTATTCAACAAGGTCTAGTTCTGCAGTGTTATTTCAGAAGCTAAAGAAGTCAGAGAGGAAGCCACTGGTAACGAGTATAAACGAGCTGAAGCGTACAGCAAGACTGAGAGCGAAAGCGAAGCAGAATGTAGAGGAAAACTCTTTGCAGCCCCCGGCCAATGGCTTGCTGGTCAAGGGCTTGGTTCATATTGGTCATCCGCCACATAAGATTAGAACATGTAATGTTGCTGGGAGCGCACCAAACAAAGAGCACACTTGGGAAATTGGAGGCATTCAGCATGTCTTTCCTACTGTGGAATCTTTCCATTTATATGACCGTATTGGCAGAGCTGTTTCACATAATGAGCAGCTCCAGGTGGATCGAATTCCAGCAGTAGTAGAATTGTGCATTCAAGCTGGTGTTGATATCCCCGAGTACCCTACAAGGCGAAGGACGTTTCCGATTTACAATGTCGCTGGAAGGACTGTCGACTTTGAGAAGAGGTTTCCCAAGAAATTCACCCTTGAAAAAGGCATTAATTCGTATGGATTTTGGAATGATAGGAAAACGGTGTGCGTGGACACGTTATCGATAAATTCCGATGATTTAAAAGAGACAGCCATCAAAGGCATGGAATCATGGGATAAAATGATATCAGGAACAGAAAAGCTCATGAAAACGTATGGTGTACAAACATGCGGCTATTGTTCAGAGGTGCAAGTTGGACCCAAAGGCCACCGGGTTAGGAACTGTCAAGCTTACAAGCACCAGATGAGGGACGGGCAACATGCGTGGCAGGAAGCAACAGTAGATGATTTGATGCCTCCGGTGTATGTGTGGCATGTTCAAGATGTGCATAGCAATGAGCCTCTATTGAACAACCTGAAGAGGTACTATGGCGTGTTGCCTGCGGTGGTGGAGTTGTTTGCTCAAGCCGGAGCTAATGTGGGCGAGAGATACACAAGCTTCATGAAGAAAGATGTAGTAGTGCCCGAGTTGGATGAAATCAATTTGGTTGTTTAG

Coding sequence (CDS)

ATGAAAGCCGCCCCTCAGCCGTCTGCCGTCCTCCGCTTCCTCTCTTCGCCGTCAGATGTCGGCTTCAGTCACCTCCATCTGAAGGTTTCGATCGTCGCAGGAATACCTCTAATTTCATGTAGATCAATACGTACACTTCCAATGTTTCGTAGAAGAATACAGAAATTTGCTGCAAACTTGACGAATTCAAGCAAGCATCCATTTCTATGGTATTCAACAAGGTCTAGTTCTGCAGTGTTATTTCAGAAGCTAAAGAAGTCAGAGAGGAAGCCACTGGTAACGAGTATAAACGAGCTGAAGCGTACAGCAAGACTGAGAGCGAAAGCGAAGCAGAATGTAGAGGAAAACTCTTTGCAGCCCCCGGCCAATGGCTTGCTGGTCAAGGGCTTGGTTCATATTGGTCATCCGCCACATAAGATTAGAACATGTAATGTTGCTGGGAGCGCACCAAACAAAGAGCACACTTGGGAAATTGGAGGCATTCAGCATGTCTTTCCTACTGTGGAATCTTTCCATTTATATGACCGTATTGGCAGAGCTGTTTCACATAATGAGCAGCTCCAGGTGGATCGAATTCCAGCAGTAGTAGAATTGTGCATTCAAGCTGGTGTTGATATCCCCGAGTACCCTACAAGGCGAAGGACGTTTCCGATTTACAATGTCGCTGGAAGGACTGTCGACTTTGAGAAGAGGTTTCCCAAGAAATTCACCCTTGAAAAAGGCATTAATTCGTATGGATTTTGGAATGATAGGAAAACGGTGTGCGTGGACACGTTATCGATAAATTCCGATGATTTAAAAGAGACAGCCATCAAAGGCATGGAATCATGGGATAAAATGATATCAGGAACAGAAAAGCTCATGAAAACGTATGGTGTACAAACATGCGGCTATTGTTCAGAGGTGCAAGTTGGACCCAAAGGCCACCGGGTTAGGAACTGTCAAGCTTACAAGCACCAGATGAGGGACGGGCAACATGCGTGGCAGGAAGCAACAGTAGATGATTTGATGCCTCCGGTGTATGTGTGGCATGTTCAAGATGTGCATAGCAATGAGCCTCTATTGAACAACCTGAAGAGGTACTATGGCGTGTTGCCTGCGGTGGTGGAGTTGTTTGCTCAAGCCGGAGCTAATGTGGGCGAGAGATACACAAGCTTCATGAAGAAAGATGTAGTAGTGCCCGAGTTGGATGAAATCAATTTGGTTGTTTAG

Protein sequence

MKAAPQPSAVLRFLSSPSDVGFSHLHLKVSIVAGIPLISCRSIRTLPMFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLLVKGLVHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEINLVV

Homology

[Close]

BLAST of Carg12103 vs. NCBI nr
Match: XP_022960063.1 (APO protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 705.3 bits (1819), Expect = 1.2e-199
Identity = 350/391 (89.51%), Postives = 352/391 (90.03%), Query Frame = 0


Query: 48  MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 107
           MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA
Sbjct: 1   MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 60

Query: 108 KAKQNVEENSLQPPANGLLVKGL-----------------------------------VH 167
           KAKQNVEENSLQPPANGL VKGL                                   VH
Sbjct: 61  KAKQNVEENSLQPPANGLPVKGLVPIAHEVYAARSELFSCISTVIKRSIVHSCRVCGEVH 120

Query: 168 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 227
           IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI
Sbjct: 121 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 180

Query: 228 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRK 287
           PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWND+K
Sbjct: 181 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDKK 240

Query: 288 TVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 347
            VC DTLSINSDDLKETAIKGME WDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR
Sbjct: 241 RVCADTLSINSDDLKETAIKGMELWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 300

Query: 348 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 404
           NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHS+EPLLNNLKRYYGVLPAVVELF
Sbjct: 301 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSSEPLLNNLKRYYGVLPAVVELF 360

[Close]

BLAST of Carg12103 vs. NCBI nr
Match: XP_023514040.1 (APO protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 702.6 bits (1812), Expect = 7.8e-199
Identity = 349/391 (89.26%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 48  MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 107
           MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKR ARLR 
Sbjct: 1   MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRAARLRL 60

Query: 108 KAKQNVEENSLQPPANGLLVKGL-----------------------------------VH 167
           KAKQNVEENSLQPPANGLLVKGL                                   VH
Sbjct: 61  KAKQNVEENSLQPPANGLLVKGLVPIAHEVYAARSELFSCISTVIKRSIVHSCRVCGEVH 120

Query: 168 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 227
           IG PPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI
Sbjct: 121 IGDPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 180

Query: 228 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRK 287
           PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWND+K
Sbjct: 181 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDKK 240

Query: 288 TVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 347
            VC DTLSINSDDLKETAIKGME WDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR
Sbjct: 241 RVCADTLSINSDDLKETAIKGMELWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 300

Query: 348 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 404
           NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF
Sbjct: 301 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 360

[Close]

BLAST of Carg12103 vs. NCBI nr
Match: XP_023004574.1 (APO protein 3, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 694.9 bits (1792), Expect = 1.6e-196
Identity = 345/391 (88.24%), Postives = 349/391 (89.26%), Query Frame = 0


Query: 48  MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRA 107
           MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKR ARLRA
Sbjct: 1   MFRRRIQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRAARLRA 60

Query: 108 KAKQNVEENSLQPPANGLLVKGL-----------------------------------VH 167
           KAKQNVEENSLQPPANGLLVKGL                                   VH
Sbjct: 61  KAKQNVEENSLQPPANGLLVKGLVPIAHEVYAARSELFSCISTVIKRSIVHCCRVCGEVH 120

Query: 168 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 227
           IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI
Sbjct: 121 IGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRI 180

Query: 228 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRK 287
           PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRT+DFEKRFPKKF LEKGINSYGFWND+K
Sbjct: 181 PAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTIDFEKRFPKKFILEKGINSYGFWNDKK 240

Query: 288 TVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVR 347
           TVCVDTLS NSDDLK TAI+GME WDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHR R
Sbjct: 241 TVCVDTLSKNSDDLKVTAIQGMELWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRAR 300

Query: 348 NCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELF 404
           NCQAYKHQMRDGQHAWQEATVDDLMP VYVWHVQDVHS+EPLLNNLKRYYGVLPAVVELF
Sbjct: 301 NCQAYKHQMRDGQHAWQEATVDDLMPLVYVWHVQDVHSSEPLLNNLKRYYGVLPAVVELF 360

[Close]

BLAST of Carg12103 vs. NCBI nr
Match: XP_022143706.1 (APO protein 3, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 594.0 bits (1530), Expect = 3.9e-166
Identity = 294/402 (73.13%), Postives = 324/402 (80.60%), Query Frame = 0


Query: 48  MFRRRIQKF-----------AANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSI 107
           MF +R+Q F           AA LT+SSKHP LWYSTRS+S VL QKLKKSERKPLVTSI
Sbjct: 1   MFLKRLQNFVNDQELFLQSVAATLTSSSKHPSLWYSTRSNSEVLLQKLKKSERKPLVTSI 60

Query: 108 NELKRTARLRAKAKQNVEENSLQPPANGLLVKGL-------------------------- 167
           NELKR ARLR K +Q+V+E SLQPPANGLLVKGL                          
Sbjct: 61  NELKREARLRRKERQSVQEISLQPPANGLLVKGLVPIAHEVYAARSELLSCVSTVIKRSI 120

Query: 168 ---------VHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAV 227
                    VHIGHPPHKIRTCNVA SAPNKEH WEIGG+QHVFPTVESFHLYDR+GRAV
Sbjct: 121 VYYCRVCGEVHIGHPPHKIRTCNVAESAPNKEHGWEIGGLQHVFPTVESFHLYDRLGRAV 180

Query: 228 SHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKG 287
           SHNEQLQVDRIPAVVELCIQAGVDI EYPTRRR+FPIY VAGRTVDFE+RFP+  +L + 
Sbjct: 181 SHNEQLQVDRIPAVVELCIQAGVDITEYPTRRRSFPIYKVAGRTVDFERRFPRNLSLGQD 240

Query: 288 INSYGFWNDRKTVCVDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSE 347
           IN+YGFWNDRK + V+ +S+NSDD K TA +GME WDKMI GTEKLM+TYGVQTCGYCSE
Sbjct: 241 INTYGFWNDRKRLSVNAISLNSDDFKVTAARGMELWDKMIKGTEKLMETYGVQTCGYCSE 300

Query: 348 VQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRY 404
           VQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDL+PPVYVWHVQDVH+ +PLL+NLKRY
Sbjct: 301 VQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVYVWHVQDVHTTQPLLDNLKRY 360

[Close]

BLAST of Carg12103 vs. NCBI nr
Match: XP_011659358.1 (PREDICTED: APO protein 3, mitochondrial [Cucumis sativus] >KGN44939.1 hypothetical protein Csa_7G397030 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 4.6e-159
Identity = 284/386 (73.58%), Postives = 307/386 (79.53%), Query Frame = 0


Query: 53  IQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQN 112
           +Q+F A  TNSS  PF+WYST  SSAVL QKLKKSERKPLV SINELKR ARLR K +Q 
Sbjct: 17  LQRFVAASTNSSNLPFVWYSTNCSSAVLLQKLKKSERKPLVKSINELKREARLRNKERQT 76

Query: 113 VEENSLQPPANGLLVKGL-----------------------------------VHIGHPP 172
           VEE SL+PPANGLLVK L                                   VHIG PP
Sbjct: 77  VEEISLKPPANGLLVKSLVPVAHEVYAAISELLSCVSTVIKRSVLYYCKVCGDVHIGDPP 136

Query: 173 HKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVE 232
           HKIRTCNVAGS PNKEHTWEIGG+QH FPTVESFHLYDRIGRAVSHNEQL+VDRI A+VE
Sbjct: 137 HKIRTCNVAGSYPNKEHTWEIGGMQHAFPTVESFHLYDRIGRAVSHNEQLEVDRITALVE 196

Query: 233 LCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVD 292
           LC+QAGVDIPEYPTRRRT PIYNVAGRT+DFEKRFPK FT++K IN+ GFW +RK    D
Sbjct: 197 LCVQAGVDIPEYPTRRRTCPIYNVAGRTIDFEKRFPKNFTMKKDINASGFWTERKKSRKD 256

Query: 293 TLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAY 352
           T+SI SDDLK TA++GM  WDKMISGTEKLM+ Y VQTCGYC EVQVGPKGHRVRNC AY
Sbjct: 257 TISIRSDDLKVTAVRGMRLWDKMISGTEKLMEKYAVQTCGYCPEVQVGPKGHRVRNCYAY 316

Query: 353 KHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGA 404
           KHQMRDGQHAWQEATVDDL+PPVYVWHVQDVHS +PL +NLKRYYGVLPAVVELFAQAGA
Sbjct: 317 KHQMRDGQHAWQEATVDDLIPPVYVWHVQDVHSTKPLSDNLKRYYGVLPAVVELFAQAGA 376

[Close]

BLAST of Carg12103 vs. TAIR10
Match: AT5G61930.1 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 269.2 bits (687), Expect = 4.0e-72
Identity = 155/363 (42.70%), Postives = 204/363 (56.20%), Query Frame = 0


Query: 86  KSERKPLVTSINELKRTARLRAKAKQNVEENSLQ-PPANGLLVKGL-------------- 145
           KSERKP  T + EL R A+   + ++      L+ PP NGLLV  L              
Sbjct: 53  KSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNML 112

Query: 146 ---------------------VHIGHPPHKIRTCNVAGS-APNKEHTWEIGGIQHVFPTV 205
                                VHIG   H+IRTC   GS + +  H W+ G +  V    
Sbjct: 113 LSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFP 172

Query: 206 ESFHLYDR-IGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 265
           + FHLYDR +   V H+E+  V +I AV+ELCIQAGVD+ ++P++RR+ P+Y++ GR VD
Sbjct: 173 KCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVD 232

Query: 266 FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDD--------LKETAIKGMESWDK 325
           FE            +N     N    V   T  I  DD        LKE + + MESW +
Sbjct: 233 FE-----------DVND---GNSELAVTSTTTLIQEDDRCKEEKKSLKELSFETMESWFE 292

Query: 326 MISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPP 385
           M+ G  KLM+ Y V TCGYC E+QVGPKGH+VR C+A KHQMRDG HAWQEAT+DD++ P
Sbjct: 293 MVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGP 352

Query: 386 VYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEI 403
            YVWHV+D      L N+LKR+YG  PAV+E+  Q GA V ++Y S M+ DVV P+ DE+
Sbjct: 353 TYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEV 401

[Close]

BLAST of Carg12103 vs. TAIR10
Match: AT1G64810.2 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 249.6 bits (636), Expect = 3.3e-66
Identity = 139/365 (38.08%), Postives = 197/365 (53.97%), Query Frame = 0


Query: 84  LKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLLVK--------------- 143
           L K+++KP      +++  AR   K  Q   E  L PP NGLLV                
Sbjct: 104 LPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKL 163

Query: 144 --------------------GLVHIGHPPHKIRTCN-VAGSAPNKEHTWEIGGIQHVFPT 203
                               G VH+ +  H IR CN    S     H+W  G I  V   
Sbjct: 164 LIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIP 223

Query: 204 VESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 263
           VES+H+YD  GR + H  + + +RIPA+VELCIQAGV+IPEYP RRRT PI  +  R +D
Sbjct: 224 VESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVID 283

Query: 264 ---FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSI-------NSDDLKETAIKGMESW 323
              + K  P+K      ++S           +DTL +         +D+ + A + M+++
Sbjct: 284 RGGYHKE-PEKPQTSSSLSS-------PLAELDTLGVFERYPPPTPEDIPKIAQETMDAY 343

Query: 324 DKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLM 383
           +K+  G  KLM+ + V+ CGYCSEV VGP GH V+ C  +KHQ RDG+H WQ+A VD++ 
Sbjct: 344 EKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVF 403

Query: 384 PPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELD 403
           PP YVWHV+D+  N PL  NL+R+YG  PA+VE+   +GA V +RY + M+ D++VP+  
Sbjct: 404 PPNYVWHVRDLKGN-PLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQ 459

[Close]

BLAST of Carg12103 vs. TAIR10
Match: AT5G57930.2 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 235.0 bits (598), Expect = 8.3e-62
Identity = 143/434 (32.95%), Postives = 219/434 (50.46%), Query Frame = 0


Query: 7   PSAVLRFLSSPSDVGFSHLHLKVSIVAGIPLISCRSIRTLPMFRRRIQKFAANLTNSSKH 66
           P+   RF  SPS  G S   ++ S+     ++  +  R+LP+  R               
Sbjct: 36  PNTFYRFGFSPSLQGSS---IEFSLQLNSRVVLSKERRSLPLVVR--------------- 95

Query: 67  PFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLL 126
                + R  +  L ++  + E+KP    I +L+R AR R K  ++  +  L PP NG++
Sbjct: 96  -----NDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNNKDKPKRPLPPPKNGMV 155

Query: 127 VKGLV-----------------------------------HIGHPPHKIRTCNVAGSAPN 186
           VK LV                                   H+G   H  ++C    ++  
Sbjct: 156 VKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQR 215

Query: 187 KE-HTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYP 246
           K  H W    I+ V   +E++HL+DR+G+ + H+E+  + R+PAVVELCIQ GV+IPE+P
Sbjct: 216 KGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEIPEFP 275

Query: 247 TRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDDLKETA 306
            +RR  PI  + G++ +F                         V   T   + ++    A
Sbjct: 276 AKRRRKPIIRI-GKS-EFVDAXXXXXXXXXXXXXXXXXLTELPVSEITPPSSEEETVSLA 335

Query: 307 IKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQE 366
            + +++W++M +G +KLM+ Y V+ CGYC EV VGP GH+ +NC A+KHQ R+GQH WQ 
Sbjct: 336 EETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQS 395

Query: 367 ATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKD 404
           A +DDL+PP YVWHV DV +  P+   L+ +YG  PAVVE+ AQAGA V E Y + M+ +
Sbjct: 396 AVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLE 443

[Close]

BLAST of Carg12103 vs. TAIR10
Match: AT3G21740.1 (Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 138.7 bits (348), Expect = 8.1e-33
Identity = 81/260 (31.15%), Postives = 120/260 (46.15%), Query Frame = 0


Query: 131 VHIGHPPHKIRTC-NVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQV 190
           V +G   H I TC +      N+ H W  G I  +   VES+HL++     + H E+   
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 191 DRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWN 250
           DR+PA++ELC QAG   PE                                 I  Y   +
Sbjct: 154 DRVPAILELCCQAGAIHPE--------------------------------EILQYSEIH 213

Query: 251 DRKTVC-VDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKG 310
           D   +   D  S+ + DLK      + +W+K+ +G +KL+  Y  + C  C EV VGP G
Sbjct: 214 DNPQISEEDIRSLPAGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSG 273

Query: 311 HRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAV 370
           H+ R C  +K++   G H W++A V+DL+P   VWH +       L++  + YYG  PA+
Sbjct: 274 HKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWH-RRPQDPVVLVDEGRSYYGHAPAI 320

Query: 371 VELFAQAGANVGERYTSFMK 389
           V L +  GA V  +Y   MK
Sbjct: 334 VSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Carg12103 vs. Swiss-Prot
Match: sp|Q9FH50|APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.2e-71
Identity = 155/363 (42.70%), Postives = 204/363 (56.20%), Query Frame = 0


Query: 86  KSERKPLVTSINELKRTARLRAKAKQNVEENSLQ-PPANGLLVKGL-------------- 145
           KSERKP  T + EL R A+   + ++      L+ PP NGLLV  L              
Sbjct: 53  KSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNML 112

Query: 146 ---------------------VHIGHPPHKIRTCNVAGS-APNKEHTWEIGGIQHVFPTV 205
                                VHIG   H+IRTC   GS + +  H W+ G +  V    
Sbjct: 113 LSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFP 172

Query: 206 ESFHLYDR-IGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 265
           + FHLYDR +   V H+E+  V +I AV+ELCIQAGVD+ ++P++RR+ P+Y++ GR VD
Sbjct: 173 KCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVD 232

Query: 266 FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDD--------LKETAIKGMESWDK 325
           FE            +N     N    V   T  I  DD        LKE + + MESW +
Sbjct: 233 FE-----------DVND---GNSELAVTSTTTLIQEDDRCKEEKKSLKELSFETMESWFE 292

Query: 326 MISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPP 385
           M+ G  KLM+ Y V TCGYC E+QVGPKGH+VR C+A KHQMRDG HAWQEAT+DD++ P
Sbjct: 293 MVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGP 352

Query: 386 VYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEI 403
            YVWHV+D      L N+LKR+YG  PAV+E+  Q GA V ++Y S M+ DVV P+ DE+
Sbjct: 353 TYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEV 401

[Close]

BLAST of Carg12103 vs. Swiss-Prot
Match: sp|Q9XIR4|APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.9e-65
Identity = 139/365 (38.08%), Postives = 197/365 (53.97%), Query Frame = 0


Query: 84  LKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLLVK--------------- 143
           L K+++KP      +++  AR   K  Q   E  L PP NGLLV                
Sbjct: 80  LPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKL 139

Query: 144 --------------------GLVHIGHPPHKIRTCN-VAGSAPNKEHTWEIGGIQHVFPT 203
                               G VH+ +  H IR CN    S     H+W  G I  V   
Sbjct: 140 LIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIP 199

Query: 204 VESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVD 263
           VES+H+YD  GR + H  + + +RIPA+VELCIQAGV+IPEYP RRRT PI  +  R +D
Sbjct: 200 VESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVID 259

Query: 264 ---FEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSI-------NSDDLKETAIKGMESW 323
              + K  P+K      ++S           +DTL +         +D+ + A + M+++
Sbjct: 260 RGGYHKE-PEKPQTSSSLSS-------PLAELDTLGVFERYPPPTPEDIPKIAQETMDAY 319

Query: 324 DKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLM 383
           +K+  G  KLM+ + V+ CGYCSEV VGP GH V+ C  +KHQ RDG+H WQ+A VD++ 
Sbjct: 320 EKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVF 379

Query: 384 PPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKDVVVPELD 403
           PP YVWHV+D+  N PL  NL+R+YG  PA+VE+   +GA V +RY + M+ D++VP+  
Sbjct: 380 PPNYVWHVRDLKGN-PLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQ 435

[Close]

BLAST of Carg12103 vs. Swiss-Prot
Match: sp|Q8W4A5|APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.5e-60
Identity = 143/434 (32.95%), Postives = 219/434 (50.46%), Query Frame = 0


Query: 7   PSAVLRFLSSPSDVGFSHLHLKVSIVAGIPLISCRSIRTLPMFRRRIQKFAANLTNSSKH 66
           P+   RF  SPS  G S   ++ S+     ++  +  R+LP+  R               
Sbjct: 33  PNTFYRFGFSPSLQGSS---IEFSLQLNSRVVLSKERRSLPLVVR--------------- 92

Query: 67  PFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNVEENSLQPPANGLL 126
                + R  +  L ++  + E+KP    I +L+R AR R K  ++  +  L PP NG++
Sbjct: 93  -----NDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNNKDKPKRPLPPPKNGMV 152

Query: 127 VKGLV-----------------------------------HIGHPPHKIRTCNVAGSAPN 186
           VK LV                                   H+G   H  ++C    ++  
Sbjct: 153 VKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQR 212

Query: 187 KE-HTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVELCIQAGVDIPEYP 246
           K  H W    I+ V   +E++HL+DR+G+ + H+E+  + R+PAVVELCIQ GV+IPE+P
Sbjct: 213 KGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEIPEFP 272

Query: 247 TRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDTLSINSDDLKETA 306
            +RR  PI  + G++ +F                         V   T   + ++    A
Sbjct: 273 AKRRRKPIIRI-GKS-EFVDAXXXXXXXXXXXXXXXXXLTELPVSEITPPSSEEETVSLA 332

Query: 307 IKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQE 366
            + +++W++M +G +KLM+ Y V+ CGYC EV VGP GH+ +NC A+KHQ R+GQH WQ 
Sbjct: 333 EETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQS 392

Query: 367 ATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGANVGERYTSFMKKD 404
           A +DDL+PP YVWHV DV +  P+   L+ +YG  PAVVE+ AQAGA V E Y + M+ +
Sbjct: 393 AVLDDLIPPRYVWHVPDV-NGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLE 440

[Close]

BLAST of Carg12103 vs. Swiss-Prot
Match: sp|Q9LSZ0|APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-31
Identity = 81/260 (31.15%), Postives = 120/260 (46.15%), Query Frame = 0


Query: 131 VHIGHPPHKIRTC-NVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQV 190
           V +G   H I TC +      N+ H W  G I  +   VES+HL++     + H E+   
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 191 DRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWN 250
           DR+PA++ELC QAG   PE                                 I  Y   +
Sbjct: 154 DRVPAILELCCQAGAIHPE--------------------------------EILQYSEIH 213

Query: 251 DRKTVC-VDTLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKG 310
           D   +   D  S+ + DLK      + +W+K+ +G +KL+  Y  + C  C EV VGP G
Sbjct: 214 DNPQISEEDIRSLPAGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSG 273

Query: 311 HRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAV 370
           H+ R C  +K++   G H W++A V+DL+P   VWH +       L++  + YYG  PA+
Sbjct: 274 HKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWH-RRPQDPVVLVDEGRSYYGHAPAI 320

Query: 371 VELFAQAGANVGERYTSFMK 389
           V L +  GA V  +Y   MK
Sbjct: 334 VSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Carg12103 vs. TrEMBL
Match: tr|A0A0A0K7T0|A0A0A0K7T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397030 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 3.1e-159
Identity = 284/386 (73.58%), Postives = 307/386 (79.53%), Query Frame = 0


Query: 53  IQKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQN 112
           +Q+F A  TNSS  PF+WYST  SSAVL QKLKKSERKPLV SINELKR ARLR K +Q 
Sbjct: 17  LQRFVAASTNSSNLPFVWYSTNCSSAVLLQKLKKSERKPLVKSINELKREARLRNKERQT 76

Query: 113 VEENSLQPPANGLLVKGL-----------------------------------VHIGHPP 172
           VEE SL+PPANGLLVK L                                   VHIG PP
Sbjct: 77  VEEISLKPPANGLLVKSLVPVAHEVYAAISELLSCVSTVIKRSVLYYCKVCGDVHIGDPP 136

Query: 173 HKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVE 232
           HKIRTCNVAGS PNKEHTWEIGG+QH FPTVESFHLYDRIGRAVSHNEQL+VDRI A+VE
Sbjct: 137 HKIRTCNVAGSYPNKEHTWEIGGMQHAFPTVESFHLYDRIGRAVSHNEQLEVDRITALVE 196

Query: 233 LCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVD 292
           LC+QAGVDIPEYPTRRRT PIYNVAGRT+DFEKRFPK FT++K IN+ GFW +RK    D
Sbjct: 197 LCVQAGVDIPEYPTRRRTCPIYNVAGRTIDFEKRFPKNFTMKKDINASGFWTERKKSRKD 256

Query: 293 TLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQAY 352
           T+SI SDDLK TA++GM  WDKMISGTEKLM+ Y VQTCGYC EVQVGPKGHRVRNC AY
Sbjct: 257 TISIRSDDLKVTAVRGMRLWDKMISGTEKLMEKYAVQTCGYCPEVQVGPKGHRVRNCYAY 316

Query: 353 KHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAGA 404
           KHQMRDGQHAWQEATVDDL+PPVYVWHVQDVHS +PL +NLKRYYGVLPAVVELFAQAGA
Sbjct: 317 KHQMRDGQHAWQEATVDDLIPPVYVWHVQDVHSTKPLSDNLKRYYGVLPAVVELFAQAGA 376

[Close]

BLAST of Carg12103 vs. TrEMBL
Match: tr|A0A2P4K840|A0A2P4K840_QUESU (Apo protein 3, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_70918 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.0e-138
Identity = 244/387 (63.05%), Postives = 290/387 (74.94%), Query Frame = 0


Query: 54  QKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNV 113
           ++ A N    ++H   WYST SS   L  K KKSERKPLVTS+NELK  ARLR K KQ V
Sbjct: 18  ERSAENFIGINRHFCGWYSTGSSHVELPIKRKKSERKPLVTSVNELKHEARLRRKEKQMV 77

Query: 114 EENSLQPPANGLLVKGL-----------------------------------VHIGHPPH 173
           +EN+L+ P NGLLVKGL                                   VH+G PPH
Sbjct: 78  QENTLRSPENGLLVKGLVPVAHEVYAARAKLNACVSRIVKSIAIFSCSLCGEVHVGDPPH 137

Query: 174 KIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVEL 233
           +IRTC+VAGS  NKEHTWE GG++H+ P VESFHLYDR+GRAVSHNEQLQVDRIPA+VEL
Sbjct: 138 RIRTCDVAGSLKNKEHTWERGGVEHILPLVESFHLYDRLGRAVSHNEQLQVDRIPAIVEL 197

Query: 234 CIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDT 293
           C+QAG DIPEYPTRRRTFPIY++AG+ +DFE+RFPK+ T  K IN+YGFW+ +K    + 
Sbjct: 198 CVQAGFDIPEYPTRRRTFPIYSLAGKVIDFERRFPKEDTPGKDINTYGFWDKKKKSSEEN 257

Query: 294 --LSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQA 353
               ++SDD++  AI+GME+W++M SG  KLMK Y VQTCGYCSE+QVGPKGH+VRNCQA
Sbjct: 258 KFFDLHSDDVQAIAIQGMEAWERMRSGASKLMKKYAVQTCGYCSEMQVGPKGHKVRNCQA 317

Query: 354 YKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAG 404
           +KHQMRDGQHAWQEATVDDL+PPVYVWHV+D HS EPL+N LKRYYG+LPAVVELFAQAG
Sbjct: 318 FKHQMRDGQHAWQEATVDDLIPPVYVWHVRDRHSGEPLVNGLKRYYGMLPAVVELFAQAG 377

[Close]

BLAST of Carg12103 vs. TrEMBL
Match: tr|D7SQI0|D7SQI0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0052g00090 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 4.9e-133
Identity = 244/403 (60.55%), Postives = 290/403 (71.96%), Query Frame = 0


Query: 44  RTLPMFRRRIQKFAANLTNSS-------KHPFLWYSTRSSSAVLFQKLKKSERKPLVTSI 103
           R LP   R ++K     + +S       K PF  +ST S+   L +KLKKSERKP VTS+
Sbjct: 52  RMLPRRIRNLRKIVVQNSFASLIELGKFKLPFRSFSTNSTCKELPRKLKKSERKPWVTSV 111

Query: 104 NELKRTARLRAKAKQNVEENSLQPPANGLLVKGL-------------------------- 163
           NELK  ARL+ +A+Q V E +L+PP NGLLVKGL                          
Sbjct: 112 NELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLFTCVSMVVKSTI 171

Query: 164 ---------VHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAV 223
                    VH+GHPPHKIRTCNV GS  +KEH WEIGG++HV P VESFHLYDR+GRAV
Sbjct: 172 IYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVESFHLYDRLGRAV 231

Query: 224 SHNEQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKG 283
           SHNE+LQVD+IPA+VELCIQAG+DIPEYPTRRRTFP+YNVAGR +DFE+RFPK  +  K 
Sbjct: 232 SHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFERRFPKYDSPGKD 291

Query: 284 INSYGFWNDRKTVCVD-TLSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCS 343
           IN+YGFW  R     + ++ + +DD++  AI+GME+W+KM  G  KLM+ Y VQTCGYCS
Sbjct: 292 INAYGFWEKRNQSSENKSMHLLADDVQGFAIQGMEAWEKMWLGASKLMQKYAVQTCGYCS 351

Query: 344 EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKR 403
           EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDL+PPV+VWHV+DV    PL+N L+R
Sbjct: 352 EVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDVQDGGPLVNGLQR 411

[Close]

BLAST of Carg12103 vs. TrEMBL
Match: tr|A0A2I4E747|A0A2I4E747_9ROSI (APO protein 3, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108986880 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 2.7e-131
Identity = 236/387 (60.98%), Postives = 284/387 (73.39%), Query Frame = 0


Query: 54  QKFAANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINELKRTARLRAKAKQNV 113
           ++ A N  +  KH    Y+T S+ + L  K KKSERKPLVTS+N+LKR ARLR K +  V
Sbjct: 18  ERSAENFIDVGKHFPACYTTGSTCSELPIKRKKSERKPLVTSVNDLKREARLRRKERLKV 77

Query: 114 EENSLQPPANGLLVKGL-----------------------------------VHIGHPPH 173
           +E  LQPP NGLLVKGL                                   VH+GHPPH
Sbjct: 78  QEVILQPPKNGLLVKGLVPVARQVYSARAKLHVCVSRVVKNIAIYTCSLCGEVHVGHPPH 137

Query: 174 KIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHNEQLQVDRIPAVVEL 233
           +IRTCNVAGS  NKEH WE GGI HV P VESFHLYDRIGRAVSHNE+L+VDRIPA++EL
Sbjct: 138 RIRTCNVAGSPTNKEHKWEKGGIGHVLPVVESFHLYDRIGRAVSHNERLEVDRIPALLEL 197

Query: 234 CIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINSYGFWNDRKTVCVDT 293
           C+QAGVDIPEYPTRRR  PIY++AGR +DFE+RFPK+ +  K IN+YGFW+ ++ +  D 
Sbjct: 198 CVQAGVDIPEYPTRRRACPIYSLAGRVIDFERRFPKEDSPGKDINTYGFWDKKRNLNNDD 257

Query: 294 --LSINSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEVQVGPKGHRVRNCQA 353
             + ++SDD++  +++GME W+KM SG  KLM+ Y VQTCGYCSE+QVGPKGHRVRNCQA
Sbjct: 258 KFMDLHSDDIQAISVQGMEEWEKMRSGASKLMEKYAVQTCGYCSEMQVGPKGHRVRNCQA 317

Query: 354 YKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYYGVLPAVVELFAQAG 404
           +KHQMRDGQHAWQEATVDDL+PPVYVWHV+D    E L+N LKRYYG+LPAVVELFAQAG
Sbjct: 318 FKHQMRDGQHAWQEATVDDLIPPVYVWHVRDGQRGELLVNGLKRYYGMLPAVVELFAQAG 377

[Close]

BLAST of Carg12103 vs. TrEMBL
Match: tr|A0A0S3SIL7|A0A0S3SIL7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G145800 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 230/401 (57.36%), Postives = 284/401 (70.82%), Query Frame = 0


Query: 41  RSIRTLPMFRRRIQKFA-ANLTNSSKHPFLWYSTRSSSAVLFQKLKKSERKPLVTSINEL 100
           R ++TL     R++    + L     H  LWYST S+   + +KL K ERKPLVTS NEL
Sbjct: 4   RHVQTLSDLLERVKLVRFSKLRGIHGHFCLWYSTLSTCNEMPKKLNKFERKPLVTSFNEL 63

Query: 101 KRTARLRAKAKQNVEENSLQPPANGLLVKGL----------------------------- 160
           KR ARL+ K +Q V E  LQPP NG+LVK L                             
Sbjct: 64  KREARLKKKERQKVHETILQPPENGMLVKNLIPVAHEVFAARCELLSCVSRLVNYTAIYV 123

Query: 161 ------VHIGHPPHKIRTCNVAGSAPNKEHTWEIGGIQHVFPTVESFHLYDRIGRAVSHN 220
                 VH+GHPPHKI+TC+V GS  +KEH+W  GG++HV P VESFHLYDRIGRAVSHN
Sbjct: 124 CSLCGEVHVGHPPHKIKTCDVRGSPSSKEHSWVKGGVEHVLPLVESFHLYDRIGRAVSHN 183

Query: 221 EQLQVDRIPAVVELCIQAGVDIPEYPTRRRTFPIYNVAGRTVDFEKRFPKKFTLEKGINS 280
           E L+VDRIPA+VELC+QAG DIPEYPTRRRTFP+Y VAGR +DFEKRFPK+ +L   I +
Sbjct: 184 EMLEVDRIPAIVELCVQAGFDIPEYPTRRRTFPVYCVAGRIIDFEKRFPKEMSLGADIEA 243

Query: 281 YGFWNDRKTVCVDTLS--INSDDLKETAIKGMESWDKMISGTEKLMKTYGVQTCGYCSEV 340
           +GFW+  K    DT S  ++SDD++  A+ GM++W+KM +G  KLM+ Y VQTCGYC+EV
Sbjct: 244 HGFWHKEKKFNKDTNSMVMHSDDIQAIAVLGMKAWEKMCTGASKLMEKYDVQTCGYCAEV 303

Query: 341 QVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLMPPVYVWHVQDVHSNEPLLNNLKRYY 400
           QVGPKGHRVRNCQA+KHQMRDGQHAWQ+AT++DL PPV V+H++D   N+PL+N LKRYY
Sbjct: 304 QVGPKGHRVRNCQAFKHQMRDGQHAWQKATINDLAPPVCVYHIRDQQGNKPLVNELKRYY 363

Query: 401 GVLPAVVELFAQAGANVGERYTSFMKKDVVVPELDEINLVV 404
           G+LPAVVELFAQAGA VG+ Y S M++DV +PE+DE   VV
Sbjct: 364 GMLPAVVELFAQAGAPVGKNYASMMREDVAIPEMDEEKWVV 404

The following BLAST results are available for this feature:

BLAST of Carg12103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960063.1	1.2e-199	89.51	APO protein 3, mitochondrial-like [Cucurbita moschata]	[more]
XP_023514040.1	7.8e-199	89.26	APO protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004574.1	1.6e-196	88.24	APO protein 3, mitochondrial-like [Cucurbita maxima]	[more]
XP_022143706.1	3.9e-166	73.13	APO protein 3, mitochondrial-like isoform X1 [Momordica charantia]	[more]
XP_011659358.1	4.6e-159	73.58	PREDICTED: APO protein 3, mitochondrial [Cucumis sativus] >KGN44939.1 hypothetic...	[more]

BLAST of Carg12103 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61930.1	4.0e-72	42.70	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT1G64810.2	3.3e-66	38.08	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G57930.2	8.3e-62	32.95	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT3G21740.1	8.1e-33	31.15	Arabidopsis thaliana protein of unknown function (DUF794)	[more]

BLAST of Carg12103 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FH50\|APO3_ARATH	7.2e-71	42.70	APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1	[more]
sp\|Q9XIR4\|APO1_ARATH	5.9e-65	38.08	APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1	[more]
sp\|Q8W4A5\|APO2_ARATH	1.5e-60	32.95	APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1	[more]
sp\|Q9LSZ0\|APO4_ARATH	1.5e-31	31.15	APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2	[more]

BLAST of Carg12103 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7T0\|A0A0A0K7T0_CUCSA	3.1e-159	73.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397030 PE=4 SV=1	[more]
tr\|A0A2P4K840\|A0A2P4K840_QUESU	1.0e-138	63.05	Apo protein 3, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_70918 PE=4 SV=1	[more]
tr\|D7SQI0\|D7SQI0_VITVI	4.9e-133	60.55	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0052g00090 PE=4 SV=...	[more]
tr\|A0A2I4E747\|A0A2I4E747_9ROSI	2.7e-131	60.98	APO protein 3, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108986880 PE=4...	[more]
tr\|A0A0S3SIL7\|A0A0S3SIL7_PHAAN	1.4e-127	57.36	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR023342	APO_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12103-RA	Carg12103-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023342	APO domain	PFAM	PF05634	APO_RNA-bind	coord: 131..227 e-value: 3.3E-33 score: 114.7 coord: 265..381 e-value: 1.8E-23 score: 82.9 coord: 79..134 e-value: 4.9E-8 score: 32.5
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 124..208 score: 14.487
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 295..381 score: 27.542
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 130..403 coord: 45..131
None	No IPR available	PANTHER	PTHR10388:SF17	SUBFAMILY NOT NAMED	coord: 130..403 coord: 45..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12103	Cla015067	Watermelon (97103) v1	carwmB0559
Carg12103	Csa7G397030	Cucumber (Chinese Long) v2	carcuB0594
Carg12103	MELO3C016003	Melon (DHL92) v3.5.1	carmeB0566
Carg12103	ClCG09G005900	Watermelon (Charleston Gray)	carwcgB0547
Carg12103	CSPI07G17460	Wild cucumber (PI 183967)	carcpiB0599
Carg12103	Cucsa.205580	Cucumber (Gy14) v1	carcgyB0640
Carg12103	CmaCh08G004210	Cucurbita maxima (Rimu)	carcmaB0792
Carg12103	CmoCh08G004150	Cucurbita moschata (Rifu)	carcmoB0771
Carg12103	Lsi02G024020	Bottle gourd (USVL1VR-Ls)	carlsiB511
Carg12103	Cp4.1LG17g07020	Cucurbita pepo (Zucchini)	carcpeB0803
Carg12103	CsGy7G015900	Cucumber (Gy14) v2	carcgybB0569
Carg12103	MELO3C016003.2	Melon (DHL92) v3.6.1	carmedB0572
Carg12103	CsaV3_7G029250	Cucumber (Chinese Long) v3	carcucB0601
Carg12103	Cla97C09G168410	Watermelon (97103) v2	carwmbB0590
Carg12103	Bhi09G000715	Wax gourd	carwgoB0673

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12103	Silver-seed gourd	carcarB130
Carg12103	Cucurbita maxima (Rimu)	carcmaB0787
Carg12103	Cucurbita moschata (Rifu)	carcmoB0767
Carg12103	Cucurbita pepo (Zucchini)	carcpeB0801