Carg23205 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23205
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Histidine triad nucleotide-binding protein 3-like
Location	Cucurbita_argyrosperma_scaffold_144 : 365902 .. 369994 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATTGGTCGGAGAAGTTCGTGAAAAAAAATGGCAGCAACAGCTTCATCTTGCATTTTCTGCCAGCGAGCTTCTAATTCTACCGCCAATAACCTTCTTCATTTTGTCTGCTCCTTTCGTTTTTCTGTGTTTCTTCTTCTCTTTACCGGCGATTGAATGAAGGGTCTCTGATTAAATATATGGGTTCTGCAGGATGAGAGAGTTGTTGCGTTCGAAGATGTAAACCCTTCTGCCGTCAGGTATTTTTCTAACATTTGATTCAGTTTTGCAATCGACATGGGGCATCTGAAATACTTCTGTGTTGATTTCATTTTCATTTCTGGCATTTCATCAGCTTCATTCGACAAAATTCATCGGTTGTTGTATACCCAGTTGCTTGATATTCACTGGGCAATCCATATCTAAACCTGGATATCTAAACCTCGAATGTGTGAGCAAAAGTAGTGCAAAATGTAGATTTATCGTTTACAATGAACATTCTTGGATGTGATTATGAATTGAAGTCCTTGATAACAATCTGAGCTTATTCAATTCATTCAATCATAGTCTTTTAAATGCTCTCCCGTTCATCTTTCCTTTGTAGTTTGTTGGTTTTTAACTTCTATGACCTGTTTGTAGTATGTTCTCATTGGCCATCGAGAGTGGCTTCAAAATGCCTTTGTGAGTAGCCATCACGGACGCTCTATGTCCGGTGAGGAATTATGAACCTCCATAATAGTATGATATTATCCCTTTGAGCATAAGCTCTCATGGGTTTACTTTTAGTTTCTCCAAAAGGCCTCGTACCATGGAGATGTATTCGTTACATATAAACCCATGATCAACAACCTCTTAATTAGTCGATGTGGGACTCCTCATCCAACAATTCTCGACATGGCCTCAGTAAGGCCACTAAGAGTGAAAATCAATTGCCATTATGCATCTCGGAGAGTCTAGAAGAAGATATATGCACAGCTTACTAAGAAACAAAGAGATAGCGGGTTATTGTCAATCTTTGGACTGTCATTTTTCATTTGTTCATGTTCATTCAGCTAAGATTCATCTGCATGAAATCCGCCATTTCTTTCCTTTCTACTATTCTTCTTACTAGTAATTATGTTGTAGACATGGATACAAGGCATTCTTACACTGAGCTACCACTTTATAGGCATTACTTGGTAATTCCCAAGGAGCACATTCCCACAGTTAGGAATCTCCAGAGAAGAGCTGAAGATTACTCACTCGGTAATGTAACCTTTGGTGATTGCATTTCATTTATGTTTTTTTTGTTTAAAGAAAGGGAAAGGAGGAGGCAATGGGATGGGGTAGCATGTCCTTAAAAAGCAAGAGGTTTAGTTACATGTTATAACTTCATAAAACATATTGGTATCTTGTCTGTATTACCATATTCTCATTCTCGAAAACCTGCATGAAGATTAGTAGCGGCATAATGCTAAGAGTGACCGTGACACCCCAAGGTCGCTTGCCGCTTAGGCACCTAGATTAGAGGGTTGTTACCATTTGTAACAGTCCAAGCCCACCGCTTGCAGATAGGTTTTTAAAATGTGTTTGCTAGGAAGAGGTTTTCATACCCTTGTAAAGTATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCATACTCGTCTTCTAAAACAAGGGCATTTTTTAGATATGTAGTCAGTTTTCTAATTTCTTATAATGACTTTGCTCATGGCTGTCTTGATTATTTATGTCAGTAAGTCACATGTTAGAGGTGGGGCAGACACTTCTATCCCAAGATTCTCCTCAATTAAAGCACAGGTAATCTGAATGATAACCCTCCTCTAAGCCTTTTACGTTGCAAGTTTTCAGCAGGAAAATGGTGTTTATATTTTAGAACTCATGCATGCAAGTGCTAAAGCAGGATGAAACTAATGAAAGCATGGGCTTTCGTGGACTAACAATCTCTCAAAACTGTCATTTGTTTGGTTTACAATATTGTACATTGGACTAGTTTGTGCCTGTGACTTATTATTGAGCAACTTATGAAATCTTTTAACTATTCGAGTAATAGCGCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGGTTTTCCCTTTCATGCTTCCCCTCAAGGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTTGGATCTCACAATCCACACTCAGTCGGGGCCCAGCGTCATCGCTGGCACTCGTCTCTCATTTCTCCAATCGATGTGGGACCCTCCAATCCACCCTGTTTCGGGGCTCAGCGTCCTTGCTGGCACACCGCCTCGTGTCCACTCCTTTCAGGGCTCAACCTCCTGACTGACACATCGCCCAGTGTCTGGCTCTGATACCATTTGTAACAGTCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGGTTTCCCTTTCATGCTTCCTCTCAAAGTTTTTAAAACACATTTGTCAGGGAGAGGGTTCTACACCCTTCTAAAGAATGCTTCGCTCTCCTCTCCAACTGATGTGTGATCTCACCGCTTGCATTGGTTGATGACAATGCATTGTGAACAATTTTATTAGTCTGAGAAATCTGATCACCTAAAAAGCTACTATAGGGACATAGTACATGGTAGCAGTTTAGTTCTTTCTTGTGAGGTGGACTAAGTGATGTATTATGTACTGTGGTTGTGAATTCCTCAGTTGTACTACAAACTTCGTCCAATGCGAAAGGATATCCTACCCATTGAGCTTCATTTGCTAGATGGCATGAACGAGAGGGACACCCTTTCGGTTGAGCAGAACGGATGCATGATAGATACTTGAAGATAGAACCAAGTGTGGTTAATGATCTGGTTACAATCTAAGGCTTTTCTTTGGGCTTTCCTTTTCGGACTTTCCCTCAAGGTTTTTAAAACGCGACTGCTAGGGAGAGGTTTGCACACCCTTGTATAGAATATGTCTGACGTGGGATCTCACAATCCACTCCCTTAGGGATCCAGCATCCTCACTGACACTTGTTCCCTTCTCCAATCGATGTGGGACCCTCTAATCCATCCTCCTTTGGGTCCCAGCGTCCTTGCTGACACACCGCCTCATGTCCACCCCCCTTCAGGGCTCAGCCTCCTCACTAGCACATCGCCTGGTGTCTGGCTCTGATACCATTTTTACCGCCGAAGCTCACCGCTAGTAGATATTGTCCTCTTTGGATTTCCTTTCAAAATTTTTAAAACACGTCTTCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTCCCCTCTTTAACCGACGTGGGATCTCACAATCCACCCCCTTCGGGTCCCAACGCCCCTCTCCAATTGATGTGGGATCTTTCAATCCACCCCCTTCAGGGCCCAACGTCCCTCTCCAACCGATGTGGGATCTCACAAAAATGAACAAAAGTTGAAAGTACCGGAACTAAAATAAACTAAAGTCACAAGTACATCAGCATTTAAAGCCTTCATTTTATGAACGAAATGCTTTGTTCCTTACAAAAGAAGTACAAAATGTTGCTAGTTTTTCTGATTTCAACTCTACTTTTAGTTCTTATCTTTCATTTTAGAGCAGCATGATACTAAACTGATGCTTCTCTTTTCTTTTTCTGAAAGATTTGGCTTCCATCAGCCCCCAATGAACAGTGTCAATCACCTACACCTCCATTGTTTTGCACTTCCTTACACACCCAGGTAACCAGTTTCTCACCTTTCACATTATCAACATATGCTTAGGATATTGCTTCAAGAAATGCCAACAATATGGTCCTGAACCGAAACGGGGGCGTAAACAGGTGGAAGTTCGCAAAATACATATCATTGGGATCGATCGGATTCATCGAAGCTGAGAAGTTGTTGGAGAAAATAAAGCCTTAACTCACACACCAGATCACTTCAGCAGCAGTCAGTATGTGTTCTTTATTATTGTTCAATGCTATGAACAGCAGAAATGTTTGATATCTCTAACCAAAGTTGAGGCATCCATCTGATATGAGTCTATTTCTTCATTGAATCAAAGTTTTTGTGTCAATTTCTACAGGAATTGCTGTTTTTAGTATAGAAAGGCTTTGTTTTTGG

mRNA sequence

GAAATTGGTCGGAGAAGTTCGTGAAAAAAAATGGCAGCAACAGCTTCATCTTGCATTTTCTGCCAGCGAGCTTCTAATTCTACCGCCAATAACCTTCTTCATTTTGTCTGCTCCTTTCGTTTTTCTGTGTTTCTTCTTCTCTTTACCGGCGATTGAATGAAGGGTCTCTGATTAAATATATGGGTTCTGCAGGATGAGAGAGTTGTTGCGTTCGAAGATGTAAACCCTTCTGCCGTCAGGCATTACTTGGTAATTCCCAAGGAGCACATTCCCACAGTTAGGAATCTCCAGAGAAGAGCTGAAGATTACTCACTCGTAAGTCACATGTTAGAGGTGGGGCAGACACTTCTATCCCAAGATTCTCCTCAATTAAAGCACAGATTTGGCTTCCATCAGCCCCCAATGAACAGTGTCAATCACCTACACCTCCATTGTTTTGCACTTCCTTACACACCCAGGTGGAAGTTCGCAAAATACATATCATTGGGATCGATCGGATTCATCGAAGCTGAGAAGTTGTTGGAGAAAATAAAGCCTTAACTCACACACCAGATCACTTCAGCAGCAGTCAGTATGTGTTCTTTATTATTGTTCAATGCTATGAACAGCAGAAATGTTTGATATCTCTAACCAAAGTTGAGGCATCCATCTGATATGAGTCTATTTCTTCATTGAATCAAAGTTTTTGTGTCAATTTCTACAGGAATTGCTGTTTTTAGTATAGAAAGGCTTTGTTTTTGG

Coding sequence (CDS)

ATGTTAGAGGTGGGGCAGACACTTCTATCCCAAGATTCTCCTCAATTAAAGCACAGATTTGGCTTCCATCAGCCCCCAATGAACAGTGTCAATCACCTACACCTCCATTGTTTTGCACTTCCTTACACACCCAGGTGGAAGTTCGCAAAATACATATCATTGGGATCGATCGGATTCATCGAAGCTGAGAAGTTGTTGGAGAAAATAAAGCCTTAA

Protein sequence

MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFIEAEKLLEKIKP

Homology

[Close]

BLAST of Carg23205 vs. NCBI nr
Match: XP_022922197.1 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Cucurbita moschata] >XP_023551645.1 bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI
Sbjct: 70  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 129

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 130 EAEKLLEKIKP 140

[Close]

BLAST of Carg23205 vs. NCBI nr
Match: XP_022969728.1 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Cucurbita maxima])

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI
Sbjct: 70  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 129

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 130 EAEKLLEKIKP 140

[Close]

BLAST of Carg23205 vs. NCBI nr
Match: XP_004152404.1 (PREDICTED: histidine triad nucleotide-binding protein 3 isoform X2 [Cucumis sativus] >KGN50250.1 hypothetical protein Csa_5G161990 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 72  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 131

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 132 EAEKLLEKIKP 142

[Close]

BLAST of Carg23205 vs. NCBI nr
Match: XP_011654800.1 (PREDICTED: histidine triad nucleotide-binding protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 73  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 132

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 133 EAEKLLEKIKP 143

[Close]

BLAST of Carg23205 vs. NCBI nr
Match: XP_022154786.1 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-33
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPP+NSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 70  MLEVGQTLLSQDSPQLKHRFGFHQPPLNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 129

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 130 EAEKLLEKIKP 140

[Close]

BLAST of Carg23205 vs. TAIR10
Match: AT4G16566.1 (histidine triad nucleotide-binding 4)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-26
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSI-GF 60
           ML VGQ LL +D+PQ  HRFGFHQPP NSV+HLHLHCFALPY PRWK  KY SLG + GF
Sbjct: 70  MLSVGQQLLQKDAPQSIHRFGFHQPPFNSVDHLHLHCFALPYVPRWKAIKYKSLGPLGGF 129

Query: 61  IEAEKLLEKIKP 72
           IEAE LLEKI+P
Sbjct: 130 IEAETLLEKIRP 141

[Close]

BLAST of Carg23205 vs. Swiss-Prot
Match: sp|Q84VV6|HINT4_ARATH (Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 OS=Arabidopsis thaliana OX=3702 GN=HINT4 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.1e-25
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSI-GF 60
           ML VGQ LL +D+PQ  HRFGFHQPP NSV+HLHLHCFALPY PRWK  KY SLG + GF
Sbjct: 70  MLSVGQQLLQKDAPQSIHRFGFHQPPFNSVDHLHLHCFALPYVPRWKAIKYKSLGPLGGF 129

Query: 61  IEAEKLLEKIKP 72
           IEAE LLEKI+P
Sbjct: 130 IEAETLLEKIRP 141

[Close]

BLAST of Carg23205 vs. Swiss-Prot
Match: sp|Q9NQE9|HINT3_HUMAN (Histidine triad nucleotide-binding protein 3 OS=Homo sapiens OX=9606 GN=HINT3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-04
Identity = 27/73 (36.99%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 1   MLEVGQTLLSQD--SPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYI-SLGSI 60
           M+ VG+T+L ++  +     R GFH PP  S++HLHLH  A P       +K +  + S 
Sbjct: 110 MVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA-PVDQLGFLSKLVYRVNSY 169

Query: 61  GFIEAEKLLEKIK 71
            FI A+ L+EK++
Sbjct: 170 WFITADHLIEKLR 181

[Close]

BLAST of Carg23205 vs. Swiss-Prot
Match: sp|Q5R9L4|HINT3_PONAB (Histidine triad nucleotide-binding protein 3 OS=Pongo abelii OX=9601 GN=HINT3 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-04
Identity = 27/73 (36.99%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 1   MLEVGQTLLSQD--SPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYI-SLGSI 60
           M+ VG+T+L ++  +     R GFH PP  S++HLHLH  A P       +K +  + S 
Sbjct: 110 MVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA-PVDQLGFLSKLVYRVNSY 169

Query: 61  GFIEAEKLLEKIK 71
            FI A+ L+EK++
Sbjct: 170 WFITADHLIEKLR 181

[Close]

BLAST of Carg23205 vs. TrEMBL
Match: tr|A0A0A0KKN0|A0A0A0KKN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161990 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 72  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 131

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 132 EAEKLLEKIKP 142

[Close]

BLAST of Carg23205 vs. TrEMBL
Match: tr|A0A1S3ATP8|A0A1S3ATP8_CUCME (histidine triad nucleotide-binding protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 51  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 110

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 111 EAEKLLEKIKP 121

[Close]

BLAST of Carg23205 vs. TrEMBL
Match: tr|A0A1S3AST8|A0A1S3AST8_CUCME (histidine triad nucleotide-binding protein 3 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 50  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 109

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 110 EAEKLLEKIKP 120

[Close]

BLAST of Carg23205 vs. TrEMBL
Match: tr|A0A1S3AT56|A0A1S3AT56_CUCME (histidine triad nucleotide-binding protein 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 71  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 130

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 131 EAEKLLEKIKP 141

[Close]

BLAST of Carg23205 vs. TrEMBL
Match: tr|A0A1S3ATA4|A0A1S3ATA4_CUCME (histidine triad nucleotide-binding protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 72  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 131

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 132 EAEKLLEKIKP 142

The following BLAST results are available for this feature:

BLAST of Carg23205 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922197.1	3.1e-34	100.00	bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [...	[more]
XP_022969728.1	3.1e-34	100.00	bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [...	[more]
XP_004152404.1	5.3e-34	98.59	PREDICTED: histidine triad nucleotide-binding protein 3 isoform X2 [Cucumis sati...	[more]
XP_011654800.1	5.3e-34	98.59	PREDICTED: histidine triad nucleotide-binding protein 3 isoform X1 [Cucumis sati...	[more]
XP_022154786.1	1.2e-33	97.18	bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [...	[more]

BLAST of Carg23205 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16566.1	1.7e-26	75.00	histidine triad nucleotide-binding 4	[more]

BLAST of Carg23205 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84VV6\|HINT4_ARATH	3.1e-25	75.00	Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 O...	[more]
sp\|Q9NQE9\|HINT3_HUMAN	3.0e-04	36.99	Histidine triad nucleotide-binding protein 3 OS=Homo sapiens OX=9606 GN=HINT3 PE...	[more]
sp\|Q5R9L4\|HINT3_PONAB	3.0e-04	36.99	Histidine triad nucleotide-binding protein 3 OS=Pongo abelii OX=9601 GN=HINT3 PE...	[more]

BLAST of Carg23205 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKN0\|A0A0A0KKN0_CUCSA	3.5e-34	98.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161990 PE=4 SV=1	[more]
tr\|A0A1S3ATP8\|A0A1S3ATP8_CUCME	2.5e-32	94.37	histidine triad nucleotide-binding protein 3 isoform X3 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S3AST8\|A0A1S3AST8_CUCME	2.5e-32	94.37	histidine triad nucleotide-binding protein 3 isoform X4 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S3AT56\|A0A1S3AT56_CUCME	2.5e-32	94.37	histidine triad nucleotide-binding protein 3 isoform X2 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S3ATA4\|A0A1S3ATA4_CUCME	2.5e-32	94.37	histidine triad nucleotide-binding protein 3 isoform X1 OS=Cucumis melo OX=3656 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036265	HIT-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23205-RA	Carg23205-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF11969	DcpS_C	coord: 1..46 e-value: 1.8E-6 score: 28.3
None	No IPR available	PANTHER	PTHR12486	APRATAXIN-RELATED	coord: 1..70
None	No IPR available	PANTHER	PTHR12486:SF5	HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3	coord: 1..70
IPR036265	HIT-like superfamily	GENE3D	G3DSA:3.30.428.10		coord: 1..71 e-value: 1.4E-9 score: 40.0
IPR036265	HIT-like superfamily	SUPERFAMILY	SSF54197	HIT-like	coord: 4..60

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23205	Csa5G161990	Cucumber (Chinese Long) v2	carcuB0573
Carg23205	MELO3C005535	Melon (DHL92) v3.5.1	carmeB0547
Carg23205	ClCG01G004020	Watermelon (Charleston Gray)	carwcgB0528
Carg23205	CSPI05G06800	Wild cucumber (PI 183967)	carcpiB0579
Carg23205	Cucsa.301840	Cucumber (Gy14) v1	carcgyB0621
Carg23205	CmaCh15G011240	Cucurbita maxima (Rimu)	carcmaB0757
Carg23205	CmoCh15G011840	Cucurbita moschata (Rifu)	carcmoB0735
Carg23205	Cp4.1LG13g02360	Cucurbita pepo (Zucchini)	carcpeB0766
Carg23205	CsGy5G004150	Cucumber (Gy14) v2	carcgybB0549
Carg23205	MELO3C005535.2	Melon (DHL92) v3.6.1	carmedB0553
Carg23205	CsaV3_5G004200	Cucumber (Chinese Long) v3	carcucB0580
Carg23205	Bhi12G000415	Wax gourd	carwgoB0653

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23205	Silver-seed gourd	carcarB506
Carg23205	Cucurbita maxima (Rimu)	carcmaB0758
Carg23205	Cucurbita moschata (Rifu)	carcmoB0736
Carg23205	Cucurbita pepo (Zucchini)	carcpeB0769
Carg23205	Bottle gourd (USVL1VR-Ls)	carlsiB493
Carg23205	Watermelon (97103) v1	carwmB0541
Carg23205	Watermelon (97103) v2	carwmbB0569