Carg23205-RA (mRNA) Silver-seed gourd

Overview
NameCarg23205-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHistidine triad nucleotide-binding protein 3-like
LocationCucurbita_argyrosperma_scaffold_144 : 365902 .. 369994 (+)
Sequence length741
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATTGGTCGGAGAAGTTCGTGAAAAAAAATGGCAGCAACAGCTTCATCTTGCATTTTCTGCCAGCGAGCTTCTAATTCTACCGCCAATAACCTTCTTCATTTTGTCTGCTCCTTTCGTTTTTCTGTGTTTCTTCTTCTCTTTACCGGCGATTGAATGAAGGGTCTCTGATTAAATATATGGGTTCTGCAGGATGAGAGAGTTGTTGCGTTCGAAGATGTAAACCCTTCTGCCGTCAGGTATTTTTCTAACATTTGATTCAGTTTTGCAATCGACATGGGGCATCTGAAATACTTCTGTGTTGATTTCATTTTCATTTCTGGCATTTCATCAGCTTCATTCGACAAAATTCATCGGTTGTTGTATACCCAGTTGCTTGATATTCACTGGGCAATCCATATCTAAACCTGGATATCTAAACCTCGAATGTGTGAGCAAAAGTAGTGCAAAATGTAGATTTATCGTTTACAATGAACATTCTTGGATGTGATTATGAATTGAAGTCCTTGATAACAATCTGAGCTTATTCAATTCATTCAATCATAGTCTTTTAAATGCTCTCCCGTTCATCTTTCCTTTGTAGTTTGTTGGTTTTTAACTTCTATGACCTGTTTGTAGTATGTTCTCATTGGCCATCGAGAGTGGCTTCAAAATGCCTTTGTGAGTAGCCATCACGGACGCTCTATGTCCGGTGAGGAATTATGAACCTCCATAATAGTATGATATTATCCCTTTGAGCATAAGCTCTCATGGGTTTACTTTTAGTTTCTCCAAAAGGCCTCGTACCATGGAGATGTATTCGTTACATATAAACCCATGATCAACAACCTCTTAATTAGTCGATGTGGGACTCCTCATCCAACAATTCTCGACATGGCCTCAGTAAGGCCACTAAGAGTGAAAATCAATTGCCATTATGCATCTCGGAGAGTCTAGAAGAAGATATATGCACAGCTTACTAAGAAACAAAGAGATAGCGGGTTATTGTCAATCTTTGGACTGTCATTTTTCATTTGTTCATGTTCATTCAGCTAAGATTCATCTGCATGAAATCCGCCATTTCTTTCCTTTCTACTATTCTTCTTACTAGTAATTATGTTGTAGACATGGATACAAGGCATTCTTACACTGAGCTACCACTTTATAGGCATTACTTGGTAATTCCCAAGGAGCACATTCCCACAGTTAGGAATCTCCAGAGAAGAGCTGAAGATTACTCACTCGGTAATGTAACCTTTGGTGATTGCATTTCATTTATGTTTTTTTTGTTTAAAGAAAGGGAAAGGAGGAGGCAATGGGATGGGGTAGCATGTCCTTAAAAAGCAAGAGGTTTAGTTACATGTTATAACTTCATAAAACATATTGGTATCTTGTCTGTATTACCATATTCTCATTCTCGAAAACCTGCATGAAGATTAGTAGCGGCATAATGCTAAGAGTGACCGTGACACCCCAAGGTCGCTTGCCGCTTAGGCACCTAGATTAGAGGGTTGTTACCATTTGTAACAGTCCAAGCCCACCGCTTGCAGATAGGTTTTTAAAATGTGTTTGCTAGGAAGAGGTTTTCATACCCTTGTAAAGTATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCATACTCGTCTTCTAAAACAAGGGCATTTTTTAGATATGTAGTCAGTTTTCTAATTTCTTATAATGACTTTGCTCATGGCTGTCTTGATTATTTATGTCAGTAAGTCACATGTTAGAGGTGGGGCAGACACTTCTATCCCAAGATTCTCCTCAATTAAAGCACAGGTAATCTGAATGATAACCCTCCTCTAAGCCTTTTACGTTGCAAGTTTTCAGCAGGAAAATGGTGTTTATATTTTAGAACTCATGCATGCAAGTGCTAAAGCAGGATGAAACTAATGAAAGCATGGGCTTTCGTGGACTAACAATCTCTCAAAACTGTCATTTGTTTGGTTTACAATATTGTACATTGGACTAGTTTGTGCCTGTGACTTATTATTGAGCAACTTATGAAATCTTTTAACTATTCGAGTAATAGCGCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGGTTTTCCCTTTCATGCTTCCCCTCAAGGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTTGGATCTCACAATCCACACTCAGTCGGGGCCCAGCGTCATCGCTGGCACTCGTCTCTCATTTCTCCAATCGATGTGGGACCCTCCAATCCACCCTGTTTCGGGGCTCAGCGTCCTTGCTGGCACACCGCCTCGTGTCCACTCCTTTCAGGGCTCAACCTCCTGACTGACACATCGCCCAGTGTCTGGCTCTGATACCATTTGTAACAGTCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGGTTTCCCTTTCATGCTTCCTCTCAAAGTTTTTAAAACACATTTGTCAGGGAGAGGGTTCTACACCCTTCTAAAGAATGCTTCGCTCTCCTCTCCAACTGATGTGTGATCTCACCGCTTGCATTGGTTGATGACAATGCATTGTGAACAATTTTATTAGTCTGAGAAATCTGATCACCTAAAAAGCTACTATAGGGACATAGTACATGGTAGCAGTTTAGTTCTTTCTTGTGAGGTGGACTAAGTGATGTATTATGTACTGTGGTTGTGAATTCCTCAGTTGTACTACAAACTTCGTCCAATGCGAAAGGATATCCTACCCATTGAGCTTCATTTGCTAGATGGCATGAACGAGAGGGACACCCTTTCGGTTGAGCAGAACGGATGCATGATAGATACTTGAAGATAGAACCAAGTGTGGTTAATGATCTGGTTACAATCTAAGGCTTTTCTTTGGGCTTTCCTTTTCGGACTTTCCCTCAAGGTTTTTAAAACGCGACTGCTAGGGAGAGGTTTGCACACCCTTGTATAGAATATGTCTGACGTGGGATCTCACAATCCACTCCCTTAGGGATCCAGCATCCTCACTGACACTTGTTCCCTTCTCCAATCGATGTGGGACCCTCTAATCCATCCTCCTTTGGGTCCCAGCGTCCTTGCTGACACACCGCCTCATGTCCACCCCCCTTCAGGGCTCAGCCTCCTCACTAGCACATCGCCTGGTGTCTGGCTCTGATACCATTTTTACCGCCGAAGCTCACCGCTAGTAGATATTGTCCTCTTTGGATTTCCTTTCAAAATTTTTAAAACACGTCTTCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTCCCCTCTTTAACCGACGTGGGATCTCACAATCCACCCCCTTCGGGTCCCAACGCCCCTCTCCAATTGATGTGGGATCTTTCAATCCACCCCCTTCAGGGCCCAACGTCCCTCTCCAACCGATGTGGGATCTCACAAAAATGAACAAAAGTTGAAAGTACCGGAACTAAAATAAACTAAAGTCACAAGTACATCAGCATTTAAAGCCTTCATTTTATGAACGAAATGCTTTGTTCCTTACAAAAGAAGTACAAAATGTTGCTAGTTTTTCTGATTTCAACTCTACTTTTAGTTCTTATCTTTCATTTTAGAGCAGCATGATACTAAACTGATGCTTCTCTTTTCTTTTTCTGAAAGATTTGGCTTCCATCAGCCCCCAATGAACAGTGTCAATCACCTACACCTCCATTGTTTTGCACTTCCTTACACACCCAGGTAACCAGTTTCTCACCTTTCACATTATCAACATATGCTTAGGATATTGCTTCAAGAAATGCCAACAATATGGTCCTGAACCGAAACGGGGGCGTAAACAGGTGGAAGTTCGCAAAATACATATCATTGGGATCGATCGGATTCATCGAAGCTGAGAAGTTGTTGGAGAAAATAAAGCCTTAACTCACACACCAGATCACTTCAGCAGCAGTCAGTATGTGTTCTTTATTATTGTTCAATGCTATGAACAGCAGAAATGTTTGATATCTCTAACCAAAGTTGAGGCATCCATCTGATATGAGTCTATTTCTTCATTGAATCAAAGTTTTTGTGTCAATTTCTACAGGAATTGCTGTTTTTAGTATAGAAAGGCTTTGTTTTTGG

mRNA sequence

GAAATTGGTCGGAGAAGTTCGTGAAAAAAAATGGCAGCAACAGCTTCATCTTGCATTTTCTGCCAGCGAGCTTCTAATTCTACCGCCAATAACCTTCTTCATTTTGTCTGCTCCTTTCGTTTTTCTGTGTTTCTTCTTCTCTTTACCGGCGATTGAATGAAGGGTCTCTGATTAAATATATGGGTTCTGCAGGATGAGAGAGTTGTTGCGTTCGAAGATGTAAACCCTTCTGCCGTCAGGCATTACTTGGTAATTCCCAAGGAGCACATTCCCACAGTTAGGAATCTCCAGAGAAGAGCTGAAGATTACTCACTCGTAAGTCACATGTTAGAGGTGGGGCAGACACTTCTATCCCAAGATTCTCCTCAATTAAAGCACAGATTTGGCTTCCATCAGCCCCCAATGAACAGTGTCAATCACCTACACCTCCATTGTTTTGCACTTCCTTACACACCCAGGTGGAAGTTCGCAAAATACATATCATTGGGATCGATCGGATTCATCGAAGCTGAGAAGTTGTTGGAGAAAATAAAGCCTTAACTCACACACCAGATCACTTCAGCAGCAGTCAGTATGTGTTCTTTATTATTGTTCAATGCTATGAACAGCAGAAATGTTTGATATCTCTAACCAAAGTTGAGGCATCCATCTGATATGAGTCTATTTCTTCATTGAATCAAAGTTTTTGTGTCAATTTCTACAGGAATTGCTGTTTTTAGTATAGAAAGGCTTTGTTTTTGG

Coding sequence (CDS)

ATGTTAGAGGTGGGGCAGACACTTCTATCCCAAGATTCTCCTCAATTAAAGCACAGATTTGGCTTCCATCAGCCCCCAATGAACAGTGTCAATCACCTACACCTCCATTGTTTTGCACTTCCTTACACACCCAGGTGGAAGTTCGCAAAATACATATCATTGGGATCGATCGGATTCATCGAAGCTGAGAAGTTGTTGGAGAAAATAAAGCCTTAA

Protein sequence

MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFIEAEKLLEKIKP
Homology
[Close]
BLAST of Carg23205-RA vs. NCBI nr
Match: XP_022922197.1 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Cucurbita moschata] >XP_023551645.1 bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI
Sbjct: 70  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 129

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 130 EAEKLLEKIKP 140

[Close]
BLAST of Carg23205-RA vs. NCBI nr
Match: XP_022969728.1 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Cucurbita maxima])

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-34
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI
Sbjct: 70  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 129

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 130 EAEKLLEKIKP 140

[Close]
BLAST of Carg23205-RA vs. NCBI nr
Match: XP_004152404.1 (PREDICTED: histidine triad nucleotide-binding protein 3 isoform X2 [Cucumis sativus] >KGN50250.1 hypothetical protein Csa_5G161990 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 72  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 131

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 132 EAEKLLEKIKP 142

[Close]
BLAST of Carg23205-RA vs. NCBI nr
Match: XP_011654800.1 (PREDICTED: histidine triad nucleotide-binding protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 73  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 132

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 133 EAEKLLEKIKP 143

[Close]
BLAST of Carg23205-RA vs. NCBI nr
Match: XP_022154786.1 (bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [Momordica charantia])

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-33
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPP+NSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 70  MLEVGQTLLSQDSPQLKHRFGFHQPPLNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 129

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 130 EAEKLLEKIKP 140

[Close]
BLAST of Carg23205-RA vs. TAIR10
Match: AT4G16566.1 (histidine triad nucleotide-binding 4)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-26
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSI-GF 60
           ML VGQ LL +D+PQ  HRFGFHQPP NSV+HLHLHCFALPY PRWK  KY SLG + GF
Sbjct: 70  MLSVGQQLLQKDAPQSIHRFGFHQPPFNSVDHLHLHCFALPYVPRWKAIKYKSLGPLGGF 129

Query: 61  IEAEKLLEKIKP 72
           IEAE LLEKI+P
Sbjct: 130 IEAETLLEKIRP 141

[Close]
BLAST of Carg23205-RA vs. Swiss-Prot
Match: sp|Q84VV6|HINT4_ARATH (Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 OS=Arabidopsis thaliana OX=3702 GN=HINT4 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.1e-25
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSI-GF 60
           ML VGQ LL +D+PQ  HRFGFHQPP NSV+HLHLHCFALPY PRWK  KY SLG + GF
Sbjct: 70  MLSVGQQLLQKDAPQSIHRFGFHQPPFNSVDHLHLHCFALPYVPRWKAIKYKSLGPLGGF 129

Query: 61  IEAEKLLEKIKP 72
           IEAE LLEKI+P
Sbjct: 130 IEAETLLEKIRP 141

[Close]
BLAST of Carg23205-RA vs. Swiss-Prot
Match: sp|Q9NQE9|HINT3_HUMAN (Histidine triad nucleotide-binding protein 3 OS=Homo sapiens OX=9606 GN=HINT3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-04
Identity = 27/73 (36.99%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 1   MLEVGQTLLSQD--SPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYI-SLGSI 60
           M+ VG+T+L ++  +     R GFH PP  S++HLHLH  A P       +K +  + S 
Sbjct: 110 MVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA-PVDQLGFLSKLVYRVNSY 169

Query: 61  GFIEAEKLLEKIK 71
            FI A+ L+EK++
Sbjct: 170 WFITADHLIEKLR 181

[Close]
BLAST of Carg23205-RA vs. Swiss-Prot
Match: sp|Q5R9L4|HINT3_PONAB (Histidine triad nucleotide-binding protein 3 OS=Pongo abelii OX=9601 GN=HINT3 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-04
Identity = 27/73 (36.99%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 1   MLEVGQTLLSQD--SPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYI-SLGSI 60
           M+ VG+T+L ++  +     R GFH PP  S++HLHLH  A P       +K +  + S 
Sbjct: 110 MVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLA-PVDQLGFLSKLVYRVNSY 169

Query: 61  GFIEAEKLLEKIK 71
            FI A+ L+EK++
Sbjct: 170 WFITADHLIEKLR 181

[Close]
BLAST of Carg23205-RA vs. TrEMBL
Match: tr|A0A0A0KKN0|A0A0A0KKN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161990 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKY+SLGSIGFI
Sbjct: 72  MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYLSLGSIGFI 131

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 132 EAEKLLEKIKP 142

[Close]
BLAST of Carg23205-RA vs. TrEMBL
Match: tr|A0A1S3ATP8|A0A1S3ATP8_CUCME (histidine triad nucleotide-binding protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 51  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 110

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 111 EAEKLLEKIKP 121

[Close]
BLAST of Carg23205-RA vs. TrEMBL
Match: tr|A0A1S3AST8|A0A1S3AST8_CUCME (histidine triad nucleotide-binding protein 3 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 50  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 109

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 110 EAEKLLEKIKP 120

[Close]
BLAST of Carg23205-RA vs. TrEMBL
Match: tr|A0A1S3AT56|A0A1S3AT56_CUCME (histidine triad nucleotide-binding protein 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 71  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 130

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 131 EAEKLLEKIKP 141

[Close]
BLAST of Carg23205-RA vs. TrEMBL
Match: tr|A0A1S3ATA4|A0A1S3ATA4_CUCME (histidine triad nucleotide-binding protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-32
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0 

Query: 1   MLEVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYTPRWKFAKYISLGSIGFI 60
           ML VGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPY PRWKF KY+SLGSIGFI
Sbjct: 72  MLGVGQTLLSQDSPQLKHRFGFHQPPMNSVNHLHLHCFALPYAPRWKFVKYLSLGSIGFI 131

Query: 61  EAEKLLEKIKP 72
           EAEKLLEKIKP
Sbjct: 132 EAEKLLEKIKP 142

The following BLAST results are available for this feature:
BLAST of Carg23205-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922197.13.1e-34100.00bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [... [more]
XP_022969728.13.1e-34100.00bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [... [more]
XP_004152404.15.3e-3498.59PREDICTED: histidine triad nucleotide-binding protein 3 isoform X2 [Cucumis sati... [more]
XP_011654800.15.3e-3498.59PREDICTED: histidine triad nucleotide-binding protein 3 isoform X1 [Cucumis sati... [more]
XP_022154786.11.2e-3397.18bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 [... [more]
BLAST of Carg23205-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16566.11.7e-2675.00histidine triad nucleotide-binding 4[more]
BLAST of Carg23205-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84VV6|HINT4_ARATH3.1e-2575.00Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 O... [more]
sp|Q9NQE9|HINT3_HUMAN3.0e-0436.99Histidine triad nucleotide-binding protein 3 OS=Homo sapiens OX=9606 GN=HINT3 PE... [more]
sp|Q5R9L4|HINT3_PONAB3.0e-0436.99Histidine triad nucleotide-binding protein 3 OS=Pongo abelii OX=9601 GN=HINT3 PE... [more]
BLAST of Carg23205-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KKN0|A0A0A0KKN0_CUCSA3.5e-3498.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161990 PE=4 SV=1[more]
tr|A0A1S3ATP8|A0A1S3ATP8_CUCME2.5e-3294.37histidine triad nucleotide-binding protein 3 isoform X3 OS=Cucumis melo OX=3656 ... [more]
tr|A0A1S3AST8|A0A1S3AST8_CUCME2.5e-3294.37histidine triad nucleotide-binding protein 3 isoform X4 OS=Cucumis melo OX=3656 ... [more]
tr|A0A1S3AT56|A0A1S3AT56_CUCME2.5e-3294.37histidine triad nucleotide-binding protein 3 isoform X2 OS=Cucumis melo OX=3656 ... [more]
tr|A0A1S3ATA4|A0A1S3ATA4_CUCME2.5e-3294.37histidine triad nucleotide-binding protein 3 isoform X1 OS=Cucumis melo OX=3656 ... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg23205Carg23205gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg23205-RACarg23205-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg23205-RA.exon.1Carg23205-RA.exon.1exon
Carg23205-RA.exon.2Carg23205-RA.exon.2exon
Carg23205-RA.exon.3Carg23205-RA.exon.3exon
Carg23205-RA.exon.4Carg23205-RA.exon.4exon
Carg23205-RA.exon.5Carg23205-RA.exon.5exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg23205-RA.five_prime_UTR.1Carg23205-RA.five_prime_UTR.1five_prime_UTR
Carg23205-RA.five_prime_UTR.2Carg23205-RA.five_prime_UTR.2five_prime_UTR
Carg23205-RA.five_prime_UTR.3Carg23205-RA.five_prime_UTR.3five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg23205-RA.CDS.1Carg23205-RA.CDS.1CDS
Carg23205-RA.CDS.2Carg23205-RA.CDS.2CDS
Carg23205-RA.CDS.3Carg23205-RA.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg23205-RA.three_prime_UTR.1Carg23205-RA.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF11969DcpS_Ccoord: 1..46
e-value: 1.8E-6
score: 28.3
NoneNo IPR availablePANTHERPTHR12486APRATAXIN-RELATEDcoord: 1..70
NoneNo IPR availablePANTHERPTHR12486:SF5HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3coord: 1..70
IPR036265HIT-like superfamilyGENE3DG3DSA:3.30.428.10coord: 1..71
e-value: 1.4E-9
score: 40.0
IPR036265HIT-like superfamilySUPERFAMILYSSF54197HIT-likecoord: 4..60