Carg13401-RA (mRNA) Silver-seed gourd

Overview
NameCarg13401-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionADP-ribosylation factor
LocationCucurbita_argyrosperma_scaffold_049 : 227707 .. 230702 (-)
Sequence length719
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCTATCATTCTATTTGGGGCCGATCGCTCAAATCCGCTCTCTTTAATTCTTGTAAGTTTTTCATTTGACTCCTTCTCTCATTTCTCTATAAGATCTGTCAAGAATTCTGTGATTTTTACCCTTAATTTTGATTCCTCCTGCTTGGATCTGGGTGATTTCCTTATTTTTCTCTGCTTGATTTTTGAATTGATTAATCTTTTGTGCGTTTTGATTGTTTGTTATTATCTGATCTGGATTTCTGTTGCACTGGTTCGGCGTTTTGTATTGGATCTAATCTGAACCTTCTTTCCTTTGAATTTCGTTGGGCGTGTTTATACCTGGATTTGTATTGATTTCGTGGAATGCCCGTATTCAACCGATTGCTTGGTGGATACGGTTCCTTGTTGCTGGATCGATCGTCTTATTGGGGATTTTTTTTTTTTTTATTGATTTGTTTTGTGCTATAGCGATTGCTTATTTTTGGTTTGAAGTATGGATGAACATGACATTATGGTCTTGATTGCAGTTACTTTTGAATCTGGACTATTTGAACTTTTGAACTTTGGATTTTCTGCACAATTTTGGCTGATTTAAGTATCTGATGTCGTTGTATTTGAATGGATATTTGTTCTGTTTTTTAGTGATGCGGATTTGTTGTTATTGTGTTCAGTTTCCGTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTAAGTAGTTGTTTTTCTCTTCAATTGTTGATTTTATTGAATAATGAAGATGGATTTGGTGTTTTCTGTTTAGAACAATTTGATGCTTTGTGTCTTGATCATATGCACTGGACATGGTTATTTAACTTGTTTAGTTCCCTGTTTGTTTGCATCAGCATCATCATTTCACTGAATCAAAATCATTATAACAAATCGAGTTGTTATATTCTTGAGGCGATGAATTTATGGATCAACATTGGATAATTAATCTAATTAAATACTTATGTCCTGTAATTTTGCATTAATTAGAGGCTATGCTTTTCTGTTATAGTTAACCACTAGATTTCAGGCATGTGATTTTCTTATAACGATAGAAACAGTGATCTGTTCATAGACGACGTGGTTTGATTTTACTGCACATTGTTGTTCTGATTTCTGTTAAAGAAACTTTTTGTGATTATGTTATTGAAAATGGAGAATGTGACATCAGAAGCATAACTGAGTAATGACTGCAGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGGTACATTGAATCATCCCGTTCTGTGTTGTTGGCTTTCTACTTTCTCTGCTCGAACATGCTAGGTGCCTTCTCCGAGTTTTAGTATAAAGAACCTCGAGCATGGTATGCATGTCATTTGATAGATGATTGTTTTTAATCCGTGGATGTTGATTGATAACGTGTAATATGTTAAGATATGGCTTCACATGTGACCTGACTCTTTTCCTTCTCGTACCGAGCCTTTTAGTCATAAAGAACATTAGCCTTTTTAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGGTACATTGAATCATGCCGTTCTGCGTTGTTGGCTTTCTACTTTCTCTGCTTGAACATTCTAGGTGCCTTCCCCGCAATTTTAGTATAAATAACCTCGAGAATGGTGTGCATGTCATTTGATAGATGATTGTTTTTAATCCGTCGATGTTGATTGATAACATGTAATATATTAAGATATGGCTTCATGTGTGACCCGTCTCTTTTTCCTTGTCGTACCGAGCCTTTTAGTCATAAGTATTGATTTTCAACTTTTCAAATTCCACAGCCTCATAATCTCTAGTTGTTCTCTTTGTTTTCTTCACTGATTTGATGCTTGTTTGTTCTGTTCCAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATAAGATCTGATTATCAGACTTTGATATAGCTTTTGCAAAAGCTACCACAAATAATTGTGTTCATTCTAGTTTGTTGTCTAGATAATAACATGCATTGAACTTACAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAGCGTCACTGGTATGTTTGACTATCATCAAACTCTTAAGCACTTGCAAATTCTTTCGTTGACTTTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGATATGGAAACCTCTCCCTAACAGACGCGTTTACAACCTTGAGGAGGGAAAGCCCAAAGTGGTGGGCTTGGATCGTTATAGGCTTACTTTAAGGTAACACTACAATGTCTCGAAATCTCGTTTCAGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGGTAAACAACTATATCTATTCTCAAACAACATTGTGCTGAGTTCTTAGTAGAGTCTAAGTTCAGCTTTTATTCTAAAATGCAAAATCTTAGTAGCTCCTAGTTCAACAATAAGATAAGATTGTTTATTTTTTCCTCATTTGCAGGCGTAGATGGCTTGCTTTGAGCTTGGATTGCTTCTGGATGTCATTTATCCCTTGGTTTTTGGGCATTTTTGTTGCATTACCTGATGATCTATACGATGTTCGTTTTGTTTCTAGTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAA

mRNA sequence

GATCTATCATTCTATTTGGGGCCGATCGCTCAAATCCGCTCTCTTTAATTCTTTTTCCGTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAGCGTCACTGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAA

Coding sequence (CDS)

ATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAGCGTCACTGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAA

Protein sequence

MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKSFLVDMIPRLPLDSE
Homology
[Close]
BLAST of Carg13401-RA vs. NCBI nr
Match: XP_019187293.1 (PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ipomoea nil] >XP_019187295.1 PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ipomoea nil])

HSP 1 Score: 353.2 bits (905), Expect = 6.2e-94
Identity = 181/204 (88.73%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSF 205
           CATSGEGLYEGLDWLSNNIANKSF
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKSF 182

[Close]
BLAST of Carg13401-RA vs. NCBI nr
Match: PHT73883.1 (ADP-ribosylation factor 1 [Capsicum annuum])

HSP 1 Score: 352.8 bits (904), Expect = 8.2e-94
Identity = 180/208 (86.54%), Postives = 183/208 (87.98%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSFLVDM 209
           CATSGEGLYEGLDWLSNNIANKS L ++
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKSLLAEL 186

[Close]
BLAST of Carg13401-RA vs. NCBI nr
Match: OWM89652.1 (hypothetical protein CDL15_Pgr024400 [Punica granatum])

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 180/204 (88.24%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSF 205
           CATSGEGLYEGLDWLSNNIANKSF
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKSF 182

[Close]
BLAST of Carg13401-RA vs. NCBI nr
Match: PHT45470.1 (ADP-ribosylation factor 2 [Capsicum baccatum])

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 180/211 (85.31%), Postives = 185/211 (87.68%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 82  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 141

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 142 ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 201

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 202 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 261

Query: 181 CATSGEGLYEGLDWLSNNIANKSFLVDMIPR 212
           CATSGEGLYEGLDWLSNNIANK  L++++ R
Sbjct: 262 CATSGEGLYEGLDWLSNNIANKRKLLEILIR 270

[Close]
BLAST of Carg13401-RA vs. NCBI nr
Match: AGV54515.1 (ADP ribosylation factor [Phaseolus vulgaris])

HSP 1 Score: 350.9 bits (899), Expect = 3.1e-93
Identity = 179/204 (87.75%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSF 205
           CATSGEGLYEGLDWLSNNIANK++
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKAY 182

[Close]
BLAST of Carg13401-RA vs. TAIR10
Match: AT1G10630.1 (ADP-ribosylation factor A1F)

HSP 1 Score: 345.9 bits (886), Expect = 1.8e-95
Identity = 177/203 (87.19%), Postives = 179/203 (88.18%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIA+K+
Sbjct: 181 CATSGEGLYEGLDWLSNNIASKA 181

[Close]
BLAST of Carg13401-RA vs. TAIR10
Match: AT3G62290.1 (ADP-ribosylation factor A1E)

HSP 1 Score: 345.9 bits (886), Expect = 1.8e-95
Identity = 177/203 (87.19%), Postives = 179/203 (88.18%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIANK+
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKA 181

[Close]
BLAST of Carg13401-RA vs. TAIR10
Match: AT5G14670.1 (ADP-ribosylation factor A1B)

HSP 1 Score: 345.9 bits (886), Expect = 1.8e-95
Identity = 177/202 (87.62%), Postives = 178/202 (88.12%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANK 203
           CATSGEGLYEGLDWLSNNIA K
Sbjct: 181 CATSGEGLYEGLDWLSNNIATK 180

[Close]
BLAST of Carg13401-RA vs. TAIR10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-95
Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIA K+
Sbjct: 181 CATSGEGLYEGLDWLSNNIAGKA 181

[Close]
BLAST of Carg13401-RA vs. TAIR10
Match: AT1G23490.1 (ADP-ribosylation factor 1)

HSP 1 Score: 345.5 bits (885), Expect = 2.4e-95
Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIA K+
Sbjct: 181 CATSGEGLYEGLDWLSNNIAGKA 181

[Close]
BLAST of Carg13401-RA vs. Swiss-Prot
Match: sp|P51823|ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-94
Identity = 177/203 (87.19%), Postives = 180/203 (88.67%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDR+
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRE 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIANK+
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKA 181

[Close]
BLAST of Carg13401-RA vs. Swiss-Prot
Match: sp|P51822|ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2)

HSP 1 Score: 346.7 bits (888), Expect = 1.9e-94
Identity = 178/203 (87.68%), Postives = 179/203 (88.18%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI DKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIA+KS
Sbjct: 181 CATSGEGLYEGLDWLSNNIASKS 181

[Close]
BLAST of Carg13401-RA vs. Swiss-Prot
Match: sp|O48920|ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3)

HSP 1 Score: 346.3 bits (887), Expect = 2.5e-94
Identity = 177/203 (87.19%), Postives = 180/203 (88.67%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGL+WLSNNIA+K+
Sbjct: 181 CATSGEGLYEGLEWLSNNIASKA 181

[Close]
BLAST of Carg13401-RA vs. Swiss-Prot
Match: sp|Q9LQC8|ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 4.3e-94
Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIA K+
Sbjct: 181 CATSGEGLYEGLDWLSNNIAGKA 181

[Close]
BLAST of Carg13401-RA vs. Swiss-Prot
Match: sp|P0DH91|ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.3e-94
Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIA K+
Sbjct: 181 CATSGEGLYEGLDWLSNNIAGKA 181

[Close]
BLAST of Carg13401-RA vs. TrEMBL
Match: tr|A0A2G2YVX7|A0A2G2YVX7_CAPAN (ADP-ribosylation factor 1 OS=Capsicum annuum OX=4072 GN=T459_21160 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.4e-94
Identity = 180/208 (86.54%), Postives = 183/208 (87.98%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSFLVDM 209
           CATSGEGLYEGLDWLSNNIANKS L ++
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKSLLAEL 186

[Close]
BLAST of Carg13401-RA vs. TrEMBL
Match: tr|A0A218XZE4|A0A218XZE4_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr024400 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 9.2e-94
Identity = 180/204 (88.24%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSF 205
           CATSGEGLYEGLDWLSNNIANKSF
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKSF 182

[Close]
BLAST of Carg13401-RA vs. TrEMBL
Match: tr|A0A2G2WJZ8|A0A2G2WJZ8_CAPBA (ADP-ribosylation factor 2 OS=Capsicum baccatum OX=33114 GN=CQW23_14628 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93
Identity = 180/211 (85.31%), Postives = 185/211 (87.68%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 82  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 141

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 142 ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 201

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 202 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 261

Query: 181 CATSGEGLYEGLDWLSNNIANKSFLVDMIPR 212
           CATSGEGLYEGLDWLSNNIANK  L++++ R
Sbjct: 262 CATSGEGLYEGLDWLSNNIANKRKLLEILIR 270

[Close]
BLAST of Carg13401-RA vs. TrEMBL
Match: tr|A0A2I0W9N8|A0A2I0W9N8_9ASPA (ADP-ribosylation factor 2 OS=Dendrobium catenatum OX=906689 GN=ARF PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93
Identity = 180/203 (88.67%), Postives = 180/203 (88.67%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKS 204
           CATSGEGLYEGLDWLSNNIANKS
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKS 181

[Close]
BLAST of Carg13401-RA vs. TrEMBL
Match: tr|T2DNK0|T2DNK0_PHAVU (ADP ribosylation factor OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93
Identity = 179/204 (87.75%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDXXXXXXXXXXXXXXXXXXXXXXXIRPLWRHYFQNTQGLIFVVDSNDRD 120
           ISFTVWDVGGQD                       IRPLWRHYFQNTQGLIFVVDSNDRD
Sbjct: 61  ISFTVWDVGGQD----------------------KIRPLWRHYFQNTQGLIFVVDSNDRD 120

Query: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180
           RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST
Sbjct: 121 RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQST 180

Query: 181 CATSGEGLYEGLDWLSNNIANKSF 205
           CATSGEGLYEGLDWLSNNIANK++
Sbjct: 181 CATSGEGLYEGLDWLSNNIANKAY 182

The following BLAST results are available for this feature:
BLAST of Carg13401-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_019187293.16.2e-9488.73PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ipomoea nil] >XP_019187295.1 PR... [more]
PHT73883.18.2e-9486.54ADP-ribosylation factor 1 [Capsicum annuum][more]
OWM89652.11.4e-9388.24hypothetical protein CDL15_Pgr024400 [Punica granatum][more]
PHT45470.11.8e-9385.31ADP-ribosylation factor 2 [Capsicum baccatum][more]
AGV54515.13.1e-9387.75ADP ribosylation factor [Phaseolus vulgaris][more]
BLAST of Carg13401-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10630.11.8e-9587.19ADP-ribosylation factor A1F[more]
AT3G62290.11.8e-9587.19ADP-ribosylation factor A1E[more]
AT5G14670.11.8e-9587.62ADP-ribosylation factor A1B[more]
AT1G70490.12.4e-9587.19Ras-related small GTP-binding family protein[more]
AT1G23490.12.4e-9587.19ADP-ribosylation factor 1[more]
BLAST of Carg13401-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P51823|ARF2_ORYSJ1.5e-9487.19ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 S... [more]
sp|P51822|ARF1_DAUCA1.9e-9487.68ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2[more]
sp|O48920|ARF_VIGUN2.5e-9487.19ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3[more]
sp|Q9LQC8|ARF2A_ARATH4.3e-9487.19ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2[more]
sp|P0DH91|ARF2B_ARATH4.3e-9487.19ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1[more]
BLAST of Carg13401-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2G2YVX7|A0A2G2YVX7_CAPAN5.4e-9486.54ADP-ribosylation factor 1 OS=Capsicum annuum OX=4072 GN=T459_21160 PE=3 SV=1[more]
tr|A0A218XZE4|A0A218XZE4_PUNGR9.2e-9488.24Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr024400 PE=3 SV=1[more]
tr|A0A2G2WJZ8|A0A2G2WJZ8_CAPBA1.2e-9385.31ADP-ribosylation factor 2 OS=Capsicum baccatum OX=33114 GN=CQW23_14628 PE=3 SV=1[more]
tr|A0A2I0W9N8|A0A2I0W9N8_9ASPA2.1e-9388.67ADP-ribosylation factor 2 OS=Dendrobium catenatum OX=906689 GN=ARF PE=3 SV=1[more]
tr|T2DNK0|T2DNK0_PHAVU2.1e-9387.75ADP ribosylation factor OS=Phaseolus vulgaris OX=3885 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg13401Carg13401gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg13401-RACarg13401-RA-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13401-RA.CDS.7Carg13401-RA.CDS.7CDS
Carg13401-RA.CDS.6Carg13401-RA.CDS.6CDS
Carg13401-RA.CDS.5Carg13401-RA.CDS.5CDS
Carg13401-RA.CDS.4Carg13401-RA.CDS.4CDS
Carg13401-RA.CDS.3Carg13401-RA.CDS.3CDS
Carg13401-RA.CDS.2Carg13401-RA.CDS.2CDS
Carg13401-RA.CDS.1Carg13401-RA.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13401-RA.five_prime_UTR.2Carg13401-RA.five_prime_UTR.2five_prime_UTR
Carg13401-RA.five_prime_UTR.1Carg13401-RA.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13401-RA.exon.8Carg13401-RA.exon.8exon
Carg13401-RA.exon.7Carg13401-RA.exon.7exon
Carg13401-RA.exon.6Carg13401-RA.exon.6exon
Carg13401-RA.exon.5Carg13401-RA.exon.5exon
Carg13401-RA.exon.4Carg13401-RA.exon.4exon
Carg13401-RA.exon.3Carg13401-RA.exon.3exon
Carg13401-RA.exon.2Carg13401-RA.exon.2exon
Carg13401-RA.exon.1Carg13401-RA.exon.1exon


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 19..42
score: 52.45
coord: 173..197
score: 24.0
coord: 47..71
score: 33.65
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 73..199
e-value: 4.1E-56
score: 189.1
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..199
e-value: 6.9E-17
score: 72.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..206
e-value: 0.0071
score: -73.8
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..203
e-value: 2.8E-127
score: 438.8
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 1..72
e-value: 2.9E-24
score: 87.3
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 73..199
e-value: 1.5E-51
score: 176.3
NoneNo IPR availablePANTHERPTHR11711:SF182SUBFAMILY NOT NAMEDcoord: 1..73
coord: 74..204
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..73
coord: 74..204
NoneNo IPR availableCDDcd04150Arf1_5_likecoord: 18..198
e-value: 2.96416E-119
score: 337.842
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 74..178
e-value: 1.4E-12
score: 45.7
coord: 16..74
e-value: 1.1E-11
score: 42.8
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 11..199
score: 25.287
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..73
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 74..202