Carg13401 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATCTATCATTCTATTTGGGGCCGATCGCTCAAATCCGCTCTCTTTAATTCTTGTAAGTTTTTCATTTGACTCCTTCTCTCATTTCTCTATAAGATCTGTCAAGAATTCTGTGATTTTTACCCTTAATTTTGATTCCTCCTGCTTGGATCTGGGTGATTTCCTTATTTTTCTCTGCTTGATTTTTGAATTGATTAATCTTTTGTGCGTTTTGATTGTTTGTTATTATCTGATCTGGATTTCTGTTGCACTGGTTCGGCGTTTTGTATTGGATCTAATCTGAACCTTCTTTCCTTTGAATTTCGTTGGGCGTGTTTATACCTGGATTTGTATTGATTTCGTGGAATGCCCGTATTCAACCGATTGCTTGGTGGATACGGTTCCTTGTTGCTGGATCGATCGTCTTATTGGGGATTTTTTTTTTTTTTATTGATTTGTTTTGTGCTATAGCGATTGCTTATTTTTGGTTTGAAGTATGGATGAACATGACATTATGGTCTTGATTGCAGTTACTTTTGAATCTGGACTATTTGAACTTTTGAACTTTGGATTTTCTGCACAATTTTGGCTGATTTAAGTATCTGATGTCGTTGTATTTGAATGGATATTTGTTCTGTTTTTTAGTGATGCGGATTTGTTGTTATTGTGTTCAGTTTCCGTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTAAGTAGTTGTTTTTCTCTTCAATTGTTGATTTTATTGAATAATGAAGATGGATTTGGTGTTTTCTGTTTAGAACAATTTGATGCTTTGTGTCTTGATCATATGCACTGGACATGGTTATTTAACTTGTTTAGTTCCCTGTTTGTTTGCATCAGCATCATCATTTCACTGAATCAAAATCATTATAACAAATCGAGTTGTTATATTCTTGAGGCGATGAATTTATGGATCAACATTGGATAATTAATCTAATTAAATACTTATGTCCTGTAATTTTGCATTAATTAGAGGCTATGCTTTTCTGTTATAGTTAACCACTAGATTTCAGGCATGTGATTTTCTTATAACGATAGAAACAGTGATCTGTTCATAGACGACGTGGTTTGATTTTACTGCACATTGTTGTTCTGATTTCTGTTAAAGAAACTTTTTGTGATTATGTTATTGAAAATGGAGAATGTGACATCAGAAGCATAACTGAGTAATGACTGCAGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGGTACATTGAATCATCCCGTTCTGTGTTGTTGGCTTTCTACTTTCTCTGCTCGAACATGCTAGGTGCCTTCTCCGAGTTTTAGTATAAAGAACCTCGAGCATGGTATGCATGTCATTTGATAGATGATTGTTTTTAATCCGTGGATGTTGATTGATAACGTGTAATATGTTAAGATATGGCTTCACATGTGACCTGACTCTTTTCCTTCTCGTACCGAGCCTTTTAGTCATAAAGAACATTAGCCTTTTTAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGGTACATTGAATCATGCCGTTCTGCGTTGTTGGCTTTCTACTTTCTCTGCTTGAACATTCTAGGTGCCTTCCCCGCAATTTTAGTATAAATAACCTCGAGAATGGTGTGCATGTCATTTGATAGATGATTGTTTTTAATCCGTCGATGTTGATTGATAACATGTAATATATTAAGATATGGCTTCATGTGTGACCCGTCTCTTTTTCCTTGTCGTACCGAGCCTTTTAGTCATAAGTATTGATTTTCAACTTTTCAAATTCCACAGCCTCATAATCTCTAGTTGTTCTCTTTGTTTTCTTCACTGATTTGATGCTTGTTTGTTCTGTTCCAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATAAGATCTGATTATCAGACTTTGATATAGCTTTTGCAAAAGCTACCACAAATAATTGTGTTCATTCTAGTTTGTTGTCTAGATAATAACATGCATTGAACTTACAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAGCGTCACTGGTATGTTTGACTATCATCAAACTCTTAAGCACTTGCAAATTCTTTCGTTGACTTTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGATATGGAAACCTCTCCCTAACAGACGCGTTTACAACCTTGAGGAGGGAAAGCCCAAAGTGGTGGGCTTGGATCGTTATAGGCTTACTTTAAGGTAACACTACAATGTCTCGAAATCTCGTTTCAGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGGTAAACAACTATATCTATTCTCAAACAACATTGTGCTGAGTTCTTAGTAGAGTCTAAGTTCAGCTTTTATTCTAAAATGCAAAATCTTAGTAGCTCCTAGTTCAACAATAAGATAAGATTGTTTATTTTTTCCTCATTTGCAGGCGTAGATGGCTTGCTTTGAGCTTGGATTGCTTCTGGATGTCATTTATCCCTTGGTTTTTGGGCATTTTTGTTGCATTACCTGATGATCTATACGATGTTCGTTTTGTTTCTAGTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAA GATCTATCATTCTATTTGGGGCCGATCGCTCAAATCCGCTCTCTTTAATTCTTTTTCCGTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAGCGTCACTGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAA ATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAGCGTCACTGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAA MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKSFLVDMIPRLPLDSE
BLAST of Carg13401 vs. NCBI nr
Match: XP_019187293.1 (PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ipomoea nil] >XP_019187295.1 PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ipomoea nil]) HSP 1 Score: 353.2 bits (905), Expect = 6.2e-94 Identity = 181/204 (88.73%), Postives = 181/204 (88.73%), Query Frame = 0
BLAST of Carg13401 vs. NCBI nr
Match: PHT73883.1 (ADP-ribosylation factor 1 [Capsicum annuum]) HSP 1 Score: 352.8 bits (904), Expect = 8.2e-94 Identity = 180/208 (86.54%), Postives = 183/208 (87.98%), Query Frame = 0
BLAST of Carg13401 vs. NCBI nr
Match: OWM89652.1 (hypothetical protein CDL15_Pgr024400 [Punica granatum]) HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93 Identity = 180/204 (88.24%), Postives = 181/204 (88.73%), Query Frame = 0
BLAST of Carg13401 vs. NCBI nr
Match: PHT45470.1 (ADP-ribosylation factor 2 [Capsicum baccatum]) HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93 Identity = 180/211 (85.31%), Postives = 185/211 (87.68%), Query Frame = 0
BLAST of Carg13401 vs. NCBI nr
Match: AGV54515.1 (ADP ribosylation factor [Phaseolus vulgaris]) HSP 1 Score: 350.9 bits (899), Expect = 3.1e-93 Identity = 179/204 (87.75%), Postives = 181/204 (88.73%), Query Frame = 0
BLAST of Carg13401 vs. TAIR10
Match: AT1G10630.1 (ADP-ribosylation factor A1F) HSP 1 Score: 345.9 bits (886), Expect = 1.8e-95 Identity = 177/203 (87.19%), Postives = 179/203 (88.18%), Query Frame = 0
BLAST of Carg13401 vs. TAIR10
Match: AT3G62290.1 (ADP-ribosylation factor A1E) HSP 1 Score: 345.9 bits (886), Expect = 1.8e-95 Identity = 177/203 (87.19%), Postives = 179/203 (88.18%), Query Frame = 0
BLAST of Carg13401 vs. TAIR10
Match: AT5G14670.1 (ADP-ribosylation factor A1B) HSP 1 Score: 345.9 bits (886), Expect = 1.8e-95 Identity = 177/202 (87.62%), Postives = 178/202 (88.12%), Query Frame = 0
BLAST of Carg13401 vs. TAIR10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein) HSP 1 Score: 345.5 bits (885), Expect = 2.4e-95 Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0
BLAST of Carg13401 vs. TAIR10
Match: AT1G23490.1 (ADP-ribosylation factor 1) HSP 1 Score: 345.5 bits (885), Expect = 2.4e-95 Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0
BLAST of Carg13401 vs. Swiss-Prot
Match: sp|P51823|ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2) HSP 1 Score: 347.1 bits (889), Expect = 1.5e-94 Identity = 177/203 (87.19%), Postives = 180/203 (88.67%), Query Frame = 0
BLAST of Carg13401 vs. Swiss-Prot
Match: sp|P51822|ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2) HSP 1 Score: 346.7 bits (888), Expect = 1.9e-94 Identity = 178/203 (87.68%), Postives = 179/203 (88.18%), Query Frame = 0
BLAST of Carg13401 vs. Swiss-Prot
Match: sp|O48920|ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3) HSP 1 Score: 346.3 bits (887), Expect = 2.5e-94 Identity = 177/203 (87.19%), Postives = 180/203 (88.67%), Query Frame = 0
BLAST of Carg13401 vs. Swiss-Prot
Match: sp|Q9LQC8|ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2) HSP 1 Score: 345.5 bits (885), Expect = 4.3e-94 Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0
BLAST of Carg13401 vs. Swiss-Prot
Match: sp|P0DH91|ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 4.3e-94 Identity = 177/203 (87.19%), Postives = 178/203 (87.68%), Query Frame = 0
BLAST of Carg13401 vs. TrEMBL
Match: tr|A0A2G2YVX7|A0A2G2YVX7_CAPAN (ADP-ribosylation factor 1 OS=Capsicum annuum OX=4072 GN=T459_21160 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 5.4e-94 Identity = 180/208 (86.54%), Postives = 183/208 (87.98%), Query Frame = 0
BLAST of Carg13401 vs. TrEMBL
Match: tr|A0A218XZE4|A0A218XZE4_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr024400 PE=3 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 9.2e-94 Identity = 180/204 (88.24%), Postives = 181/204 (88.73%), Query Frame = 0
BLAST of Carg13401 vs. TrEMBL
Match: tr|A0A2G2WJZ8|A0A2G2WJZ8_CAPBA (ADP-ribosylation factor 2 OS=Capsicum baccatum OX=33114 GN=CQW23_14628 PE=3 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93 Identity = 180/211 (85.31%), Postives = 185/211 (87.68%), Query Frame = 0
BLAST of Carg13401 vs. TrEMBL
Match: tr|A0A2I0W9N8|A0A2I0W9N8_9ASPA (ADP-ribosylation factor 2 OS=Dendrobium catenatum OX=906689 GN=ARF PE=3 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93 Identity = 180/203 (88.67%), Postives = 180/203 (88.67%), Query Frame = 0
BLAST of Carg13401 vs. TrEMBL
Match: tr|T2DNK0|T2DNK0_PHAVU (ADP ribosylation factor OS=Phaseolus vulgaris OX=3885 PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 2.1e-93 Identity = 179/204 (87.75%), Postives = 181/204 (88.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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