Cp4.1LG17g07700 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g07700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionADP-ribosylation factor
LocationCp4.1LG17 : 5781636 .. 5784835 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGAGTCCTCATGATTTGCGAATGCGCTTTTGATCGTTAAGGACAGCTTCTCTCTTGCACAAGAGAGATCTATCATTCTATTTGGGGCCGATCGCTCAAATCCGCTCTCTTTAATTCTTGTAAGTTTTTCATTTGACTCCTTCTCTCATTTCTCTATAAGATCTGTCAAGAATTCTGTGATTTTTACCCTTAATTTTGATTCCTCCTGCTTGGATCTGGGTGATTTCCTTATTTTTCTCTGCTTGATTTTTGAATTGATTAATCTTTTGTGCGTTTTGATTGTTTGTTATTATCTGATCTGGATTTCTGTTGCACTGGTTCGGCGTTTTGTATTGGATCTAATCTGAACCTTCTTTCCTTTGAATTTCGTTGGGCGTGTTTATACCTGGATTTGTATTGATTTCGTGGAATGCCCGTATTTAACCGATTGCTTGGTGGATACGGTTCCTTGGTGCTGGATCGATCGTCTTATTGGGGATTTTTTTTTTATTGATTTGTTTTGTGCTATAGCGATTGCTTATTTTTGGTTTGAAGTATGGATGAACATGACATTATGGTCTTGATTGCAGTTACTTTTGAATCTGGACTATTTGAGCTTTTGAACTTTGGATTTTCTGCACAATTTTGGCTGATTGAAGTATCTGATGTCGTTGTATTTTAATGGATAATTGTTCTGTTTTTTAGTGATGCGGATTTGTTGTTATTGTGTTCAGTTTCCGTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGGTAAGTCGTTGTTTTTCTCTTCAATTGTTGATTTTATTGAATAATGAAGATGGATTTGGTGTTTTCTGTTTAGAACAATTTGATGCTTTGTGTCTTGATCATATGCACTGGACATGGTTATTTAACTTGTTTAGTTCCCTGTTTGTTTGCATCAGCATCATCATTTCACTGAATCAAAATCATTATAACAAATCGAGTTGTTATATTCTTGAGGCGATGAATTTATGGATCAACATTGGATAATTAATCTAATTAAATACCTATGTCCTGTAATTTTGCATTAAGTAGAGGCTATATGCCTTTCTCTTATAGTTAACCACTAGATTTCAGGTATGTGATTTTCTTATAACGATAGAAACAGTGATCTGTTCATAGACGACGTTGTTTGATTTCACTGCACATTGTTGTTCTTATTTCTGTTAAAGAAACTATTTGTGATTATGTCTTTGAAAATGGAGAATGTGATATCAGAAGCATAACTGAATAATGACTGCAGGTTTCAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGATAAGGTACGTTGAATAATCCCGTTCTGTGTTGTTGGCTTTCTACTTTCTCTGCTCGAACATTCTAGGTGCCTTCCCCGAGTTAGTATAAAGAACCTCGAGCATGGTATGCATGTCATTTGATAGATGATTGTTTTTAATCCGTGGATATTGATTGATAACGTGTAATATGTTAAGATATGGCTTCACATGTGACCTGTCTCTTTTCCTTCTCGTACCGAGCCTTTTAGTCATAAAGAACATTAGCCATTTTAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGGTACATTGAATCATCCCGTTGTGTTGTTGGCTTTTTCTACTTTCTCTGCTTGAACATTCTAGGTGCCTTCCCCGCAATTTTAGTATAAATAACCTCGAGAATGGTGTGCATGTCATTTGATAGATGATTGTTTTTAATCCGTCGATGTTGATTGATAACGTGTAATATATTAAGATATGGCTTCATGTGTGACCCATCTCTTTTTCCTTGTCGTACCGAGCCTTTTTGTCATAAGTATTGATTTCATTAGCCAGTCCTTTTTCAACTTTTCAACTTCCACAGCCTCATAATCTCTAGTTGTTCTCTTTGTGTTCTTCACTGATTTGATGTTTGTTTGTTCTGTTCCAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACTCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATAAGATCTGATTATCAGACTTTGATATAGCTTTTGCAAAAGCTACCACAAATAATTGTGTTCATTCTAGTTTGTTGTCTAGATAATAACATGCATTGCACTTACAGGACGAGCTGAGGGATGCTGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACCGATAAGCTCGGTCTTCACTCCCTCCGACAACGTCACTGGTACGTTTGACTATCATCAAACTCTTAAGCACTTGCGAATTCTTTCGTTGACTTTGTGAGATCTCACATTGGTTGGGGAGGAGAACGAAGCATTATTTATAAGGATATGTAAACTTCTCCCTAACAGACGCGTTTAAAACCTTGAGGGAAAGCCCAAAGAGGACAATATCTACTAGTGGTGGGCTTGGATCCTTATAGGTCTTACTTTAAGGTAACACTACAATGTCTCGAAATCTCGTTTCAGGTACATTCAAAGCACATGTGCCACATCTGGTGAAGGGCTGTACGAAGGACTCGACTGGCTCTCAAACAACATTGCCAACAAGGTAAACAACAATATCTATTCTCAAACAACATTGTGCTAAGTTCTTAGTAGAGTCTAAGTTCAGCTTCTGTTTATTTTTCCTCATTTGCAGGCGTAGATGGCTTGCTTTGAGCTTGGATTGCTTCTGGAAATTCAAATTCATGTCATTTATCCCTTGGTTTTTGGGCATTTTTGTTGCATTACCTGATGATCTATACGATGTTCGTTTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAATTGAAGAAATTTTGCAAGTGTTTTCTCATGTTATCGACTTAATAGCATTGTTTTTATGTAACGAATTAATGATGTTCTTAAATAGATATATTTGTACGAATACCATTTTCATTATTTGGAATGGATTGCTGAAAAGAAAATCTTATTGAAAATAAGTCTA

mRNA sequence

ATAGAGTCCTCATGATTTGCGAATGCGCTTTTGATCGTTAAGGACAGCTTCTCTCTTGCACAAGAGAGATCTATCATTCTATTTGGGGCCGATCGCTCAAATCCGCTCTCTTTAATTCTTTTTCCGTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGTCATAAAGAACATTAGCCATTTTAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGGCGTAGATGGCTTGCTTTGAGCTTGGATTGCTTCTGGAAATTCAAATTCATGTCATTTATCCCTTGGTTTTTGGGCATTTTTGTTGCATTACCTGATGATCTATACGATGTTCGTTTCGTTTCTAGTCGACATGATTCCTAGGTTGCCTTTGGATTCTGAATAATTGAAGAAATTTTGCAAGTGTTTTCTCATGTTATCGACTTAATAGCATTGTTTTTATGTAACGAATTAATGATGTTCTTAAATAGATATATTTGTACGAATACCATTTTCATTATTTGGAATGGATTGCTGAAAAGAAAATCTTATTGAAAATAAGTCTA

Coding sequence (CDS)

ATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTCGACGCAGCTGGTAAGACGACGATCCTTTACAAACTCAAGCTGGGAGAGATTGTCACCACCATTCCCACCATTGTCATAAAGAACATTAGCCATTTTAGAATGTTGAGACCGTCGAATACAAGAACATTAGCTTCACTGTCTGGGATGTTGGGGGTCAAGACAAGGCGTAGATGGCTTGCTTTGAGCTTGGATTGCTTCTGGAAATTCAAATTCATGTCATTTATCCCTTGGTTTTTGGGCATTTTTGTTGCATTACCTGATGATCTATACGATGTTCGTTTCGTTTCTAGTCGACATGATTCCTAG

Protein sequence

MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVIKNISHFRMLRPSNTRTLASLSGMLGVKTRRRWLALSLDCFWKFKFMSFIPWFLGIFVALPDDLYDVRFVSSRHDS
Homology
[Close]
BLAST of Cp4.1LG17g07700 vs. Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TrEMBL
Match: A0A0B2S9N5_GLYSO (ADP-ribosylation factor OS=Glycine soja GN=glysoja_002014 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-17
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVI 52
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIV+
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVL 51

[Close]
BLAST of Cp4.1LG17g07700 vs. TrEMBL
Match: V4VGD6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032807mg PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVIK--NISHFR 60
          MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI I+  N  + R
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIAIQGCNCLNVR 60

Query: 61 MLRPSNTRTL 69
          +    N  T+
Sbjct: 61 LSTGFNVETV 70

[Close]
BLAST of Cp4.1LG17g07700 vs. TrEMBL
Match: A0A0K9RI63_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_063800 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TrEMBL
Match: A0A0A0K6E8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414405 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TrEMBL
Match: A9P9X4_POPTR (ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0005s00910g PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TAIR10
Match: AT5G14670.1 (AT5G14670.1 ADP-ribosylation factor A1B)

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-19
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLNFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 90.9 bits (224), Expect = 6.1e-19
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. NCBI nr
Match: gi|734425754|gb|KHN43431.1| (ADP-ribosylation factor [Glycine soja])

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-17
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVI 52
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIV+
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVL 51

[Close]
BLAST of Cp4.1LG17g07700 vs. NCBI nr
Match: gi|567891687|ref|XP_006438364.1| (hypothetical protein CICLE_v10032807mg [Citrus clementina])

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIVIK--NISHFR 60
          MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI I+  N  + R
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIAIQGCNCLNVR 60

Query: 61 MLRPSNTRTL 69
          +    N  T+
Sbjct: 61 LSTGFNVETV 70

[Close]
BLAST of Cp4.1LG17g07700 vs. NCBI nr
Match: gi|568214330|ref|NP_001274832.1| (ADP-ribosylation factor 1-like protein [Solanum tuberosum])

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. NCBI nr
Match: gi|802691784|ref|XP_012082956.1| (PREDICTED: ADP-ribosylation factor-like [Jatropha curcas])

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

[Close]
BLAST of Cp4.1LG17g07700 vs. NCBI nr
Match: gi|460415182|ref|XP_004252939.1| (PREDICTED: ADP-ribosylation factor 2 [Solanum lycopersicum])

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 50
          MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 1  MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g07700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARF_VIGUN1.7e-18100.00ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3[more]
ARF1_DAUCA1.7e-18100.00ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2[more]
ARF_MAIZE3.7e-1897.96ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2[more]
ARF1_ORYSJ3.7e-1897.96ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 S... [more]
ARF2_ORYSJ3.7e-1897.96ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2[more]
BLAST of Cp4.1LG17g07700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B2S9N5_GLYSO4.9e-1798.04ADP-ribosylation factor OS=Glycine soja GN=glysoja_002014 PE=4 SV=1[more]
V4VGD6_9ROSI1.1e-1675.71Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032807mg PE=3 SV=1[more]
A0A0K9RI63_SPIOL1.9e-16100.00Uncharacterized protein OS=Spinacia oleracea GN=SOVF_063800 PE=3 SV=1[more]
A0A0A0K6E8_CUCSA1.9e-16100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414405 PE=3 SV=1[more]
A9P9X4_POPTR1.9e-16100.00ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0005s0091... [more]
BLAST of Cp4.1LG17g07700 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G14670.12.1e-1997.96 ADP-ribosylation factor A1B[more]
AT1G23490.13.6e-1997.96 ADP-ribosylation factor 1[more]
AT1G10630.13.6e-1997.96 ADP-ribosylation factor A1F[more]
AT1G70490.13.6e-1997.96 Ras-related small GTP-binding family protein[more]
AT2G47170.16.1e-1997.96 Ras-related small GTP-binding family protein[more]
BLAST of Cp4.1LG17g07700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|734425754|gb|KHN43431.1|7.0e-1798.04ADP-ribosylation factor [Glycine soja][more]
gi|567891687|ref|XP_006438364.1|1.6e-1675.71hypothetical protein CICLE_v10032807mg [Citrus clementina][more]
gi|568214330|ref|NP_001274832.1|2.7e-16100.00ADP-ribosylation factor 1-like protein [Solanum tuberosum][more]
gi|802691784|ref|XP_012082956.1|2.7e-16100.00PREDICTED: ADP-ribosylation factor-like [Jatropha curcas][more]
gi|460415182|ref|XP_004252939.1|2.7e-16100.00PREDICTED: ADP-ribosylation factor 2 [Solanum lycopersicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006689Small_GTPase_ARF/SAR
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g07700.1Cp4.1LG17g07700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 5..50
score: 4.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 1..53
score: 4.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..52
score: 5.79
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..49
score: 1.1
NoneNo IPR availablePANTHERPTHR11711:SF181ADP-RIBOSYLATION FACTOR A1Fcoord: 1..49
score: 1.1
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..126
score: 5.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g07700ClCG09G004820Watermelon (Charleston Gray)cpewcgB280
Cp4.1LG17g07700MELO3C023630.2Melon (DHL92) v3.6.1cpemedB347
Cp4.1LG17g07700CsaV3_7G030260Cucumber (Chinese Long) v3cpecucB0422
Cp4.1LG17g07700Bhi09G000646Wax gourdcpewgoB0414
Cp4.1LG17g07700CsGy7G016830Cucumber (Gy14) v2cgybcpeB931
Cp4.1LG17g07700Carg07099Silver-seed gourdcarcpeB0161
Cp4.1LG17g07700Carg13401Silver-seed gourdcarcpeB0632
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g07700Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG17g07700Cucurbita pepo (Zucchini)cpecpeB332
Cp4.1LG17g07700Cucurbita pepo (Zucchini)cpecpeB336
Cp4.1LG17g07700Cucumber (Gy14) v1cgycpeB0335
Cp4.1LG17g07700Cucurbita maxima (Rimu)cmacpeB269
Cp4.1LG17g07700Cucurbita maxima (Rimu)cmacpeB376
Cp4.1LG17g07700Cucurbita maxima (Rimu)cmacpeB472
Cp4.1LG17g07700Cucurbita maxima (Rimu)cmacpeB917
Cp4.1LG17g07700Cucurbita moschata (Rifu)cmocpeB232
Cp4.1LG17g07700Cucurbita moschata (Rifu)cmocpeB339
Cp4.1LG17g07700Cucurbita moschata (Rifu)cmocpeB430
Cp4.1LG17g07700Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g07700Wild cucumber (PI 183967)cpecpiB344
Cp4.1LG17g07700Cucumber (Chinese Long) v2cpecuB343
Cp4.1LG17g07700Bottle gourd (USVL1VR-Ls)cpelsiB262
Cp4.1LG17g07700Bottle gourd (USVL1VR-Ls)cpelsiB266
Cp4.1LG17g07700Watermelon (Charleston Gray)cpewcgB290
Cp4.1LG17g07700Watermelon (97103) v1cpewmB311
Cp4.1LG17g07700Watermelon (97103) v1cpewmB322
Cp4.1LG17g07700Melon (DHL92) v3.5.1cpemeB299
Cp4.1LG17g07700Silver-seed gourdcarcpeB1071
Cp4.1LG17g07700Silver-seed gourdcarcpeB1145