Carg12410 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12410
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Homeobox prospero
Location	Cucurbita_argyrosperma_scaffold_074 : 805063 .. 807102 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTTTTTTCCTCTCTAGAGTTCATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAACAAAGATACTGGAGGACGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATCGCGCCGATTTTCAATTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCAGTAGCTCTGTGATATTACTTAGAGTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCAATCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGTAAGTTACGAATAGTTTGTGCCTCATTTCTTCCATTTTTGGCTTTGATTTATGAGCTTGCCTCCTTACTGTTTGATAAATTGCTTGAAAGCAATATATATGTATATTGTTTATATATAGTTTTCTTGTACTGGAATCTCAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTTGTTAAATCTCCGCATAATACCCAAAAAATTTAAGTTGATTGAAAATGAAATTGAGCTGCTGTATAAATTTCACTGCTAGATGGAAAAAAAAATAGGGAAAAATTATAAAATCCACTTAGAACAATAAGGGTGTTGCAATTGTATTTCAAAACTTCTTTGCAATTAAACTACATCATTGTAACTTTGTGATGATTGAGTGTAGTGTAACAATTCTCATAGTTTATGTGTTCTAATGGTTGTTCTAAGTGGTTGGACCTTTTTCAACTTGCAACGAACAGAATTGTTGCAAAACTGTTCAATTGCAGCGAGTTCATCAGTTTGAGGATAATTGCTTGAATTTAAAGTTTGAGGGTGGGATTGTAATAACTAGATAAGGTCGTGAATTAAGCTGAATCTAATCATTATGATATAATTGTAAACCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCTTAATTTGTGCATGTGTTTGTTCTTGTTGTGAAAGTTCTGAATATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTGAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCTCTATGGATTGGTTTTAAGTTTTAATCGATACTTGGTTCATCAATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATGTATTCAAATTATTAACTTGCATCCAATTTCGAATGATTGTCTTTTCAATATAAAGTTCGAAAACGAAATACGATGTTTAAAAATATAAAGACTAAAATGAAACAATGTACGAAATCTTAAGGACTATCCCATGGCTCAATCCTTTTATTACCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGAAATTTCTTAGTAGTATTATATAACTAGATTCTTGTTGAATATACT

mRNA sequence

TTTTCTTTTTTCCTCTCTAGAGTTCATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAACAAAGATACTGGAGGACGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATCGCGCCGATTTTCAATTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCAGTAGCTCTGTGATATTACTTAGAGTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCAATCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCTTAATTTGTGCATGTGTTTGTTCTTGTTGTGAAAGTTCTGAATATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTGAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCTCTATGGATTGGTTTTAAGTTTTAATCGATACTTGGTTCATCAATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATGTATTCAAATTATTAACTTGCATCCAATTTCGAATGATTGTCTTTTCAATATAAAGTTCGAAAACGAAATACGATGTTTAAAAATATAAAGACTAAAATGAAACAATGTACGAAATCTTAAGGACTATCCCATGGCTCAATCCTTTTATTACCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGAAATTTCTTAGTAGTATTATATAACTAGATTCTTGTTGAATATACT

Coding sequence (CDS)

ATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGCGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCAAAGGGAGGAATGATCGGAACCGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAAAAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTCATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGA

Protein sequence

MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNETSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFDKDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE

Homology

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_022948350.1 (uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948351.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948352.1 uncharacterized protein LOC111452054 [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 6.5e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_022998684.1 (uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998685.1 uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998686.1 uncharacterized protein LOC111493271 [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 2.5e-87
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELE NKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELENNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_023523491.1 (uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo] >XP_023523492.1 uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.6 bits (841), Expect = 1.2e-86
Identity = 159/162 (98.15%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRS+AEKDLAHLYERREFPYPGDEEAMEDFI+KGGMIGTAIGPKGVIDFD
Sbjct: 61  TSPFGWWTLKPRSRAEKDLAHLYERREFPYPGDEEAMEDFISKGGMIGTAIGPKGVIDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDSFNYQKELE NKLEQEAQKLWFRMRNEVISELQGKGYDVE
Sbjct: 121 KDSFNYQKELENNKLEQEAQKLWFRMRNEVISELQGKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_004154327.1 (PREDICTED: uncharacterized protein LOC101221969 [Cucumis sativus] >XP_011658438.1 PREDICTED: uncharacterized protein LOC101221969 [Cucumis sativus] >KGN65782.1 hypothetical protein Csa_1G528470 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 3.1e-82
Identity = 149/162 (91.98%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QL+KSMRAERFLKKVGLGREDRYFWKQ+GKALL +YTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLMKSMRAERFLKKVGLGREDRYFWKQVGKALLCTYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFI KGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIVKGGMIGTAIGPKGILDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNTKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. NCBI nr
Match: XP_022965021.1 (uncharacterized protein LOC111464959 [Cucurbita moschata] >XP_022965022.1 uncharacterized protein LOC111464959 [Cucurbita moschata] >XP_023519188.1 uncharacterized protein LOC111782637 [Cucurbita pepo subsp. pepo] >XP_023519189.1 uncharacterized protein LOC111782637 [Cucurbita pepo subsp. pepo] >XP_023519190.1 uncharacterized protein LOC111782637 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.2 bits (801), Expect = 5.3e-82
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTGLQLVKSMR E+FLKKVGLGRED YFWKQIGKALL +YTLIG AWLYNE
Sbjct: 1   MIRKRFQEAKTGLQLVKSMRTEKFLKKVGLGREDGYFWKQIGKALLCTYTLIGAAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAME+FIAKGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEEFIAKGGMIGTAIGPKGMVDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NY+KELEKNKLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYEKELEKNKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. TAIR10
Match: AT5G58920.1 (unknown protein)

HSP 1 Score: 256.9 bits (655), Expect = 8.2e-69
Identity = 114/162 (70.37%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           M+RK+FQ+AKTG++ +KSM A  +LKKVGLGR+D +FWKQ+GKALL +YT+ G+AW+YNE
Sbjct: 1   MVRKQFQQAKTGIEALKSMDANNYLKKVGLGRDDMFFWKQVGKALLCTYTIFGMAWIYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSP GWWTLKPR K E++LAHLYERREFPYPGD EAMEDF+AKGGMIGTAIGPKG+++ +
Sbjct: 61  TSPLGWWTLKPRPKEERELAHLYERREFPYPGDTEAMEDFVAKGGMIGTAIGPKGIVESE 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
            ++ NYQKE+EK K ++EAQKLW RMRNEVI+ELQ KG+++E
Sbjct: 121 GEADNYQKEMEKKKFDKEAQKLWLRMRNEVITELQEKGHNLE 162

[Close]

BLAST of Carg12410 vs. TrEMBL
Match: tr|A0A0A0LY68|A0A0A0LY68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528470 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.1e-82
Identity = 149/162 (91.98%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QL+KSMRAERFLKKVGLGREDRYFWKQ+GKALL +YTLIGVAWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLMKSMRAERFLKKVGLGREDRYFWKQVGKALLCTYTLIGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFI KGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIVKGGMIGTAIGPKGILDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNTKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. TrEMBL
Match: tr|A0A1S3C5F1|A0A1S3C5F1_CUCME (uncharacterized protein LOC103497102 OS=Cucumis melo OX=3656 GN=LOC103497102 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.3e-80
Identity = 145/162 (89.51%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKRFQEAKTG+QL+ SMR ERFL+KVGLGREDRYFWKQIGKALL +YT+IG AWLYNE
Sbjct: 1   MIRKRFQEAKTGMQLMNSMRVERFLRKVGLGREDRYFWKQIGKALLCTYTVIGAAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFI KGGMIGTAIGPKG++DFD
Sbjct: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIVKGGMIGTAIGPKGILDFD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KDS+NYQKEL+  KLEQEAQKLWFRMRNEVISELQ KGYDVE
Sbjct: 121 KDSYNYQKELQNAKLEQEAQKLWFRMRNEVISELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. TrEMBL
Match: tr|A0A2P4J0A6|A0A2P4J0A6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_46938 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.7e-73
Identity = 132/162 (81.48%), Postives = 147/162 (90.74%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKR+QEAKTG QLVKSM A+++LKK+GLG+ED YFWKQIGKALL +YTL GVAWLYNE
Sbjct: 1   MIRKRYQEAKTGFQLVKSMNAQKYLKKIGLGKEDYYFWKQIGKALLCTYTLFGVAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSP GWWTLKPR K EK+LAHLYERREFPYPGDEEAME+FIAKGGMIGT IGPKGV++ D
Sbjct: 61  TSPLGWWTLKPRPKEEKELAHLYERREFPYPGDEEAMEEFIAKGGMIGTTIGPKGVVETD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KD+FNYQK+L+  KLEQEAQKLW RMRNEVI ELQ KG+DVE
Sbjct: 121 KDAFNYQKDLQNKKLEQEAQKLWLRMRNEVIQELQEKGHDVE 162

[Close]

BLAST of Carg12410 vs. TrEMBL
Match: tr|A0A2I4H027|A0A2I4H027_9ROSI (uncharacterized protein LOC109012364 OS=Juglans regia OX=51240 GN=LOC109012364 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 129/162 (79.63%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           MIRKR+QEAKTG QL+KSM A+++LKKVGLG+ED YFWKQIGKALL +YT+ G AWLYNE
Sbjct: 1   MIRKRYQEAKTGFQLMKSMNAQKYLKKVGLGKEDYYFWKQIGKALLCTYTIFGAAWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSP GWWTLKPR K EK+LAHLYERREFPYPGDEEAM++FIAKGGM+GT IGPKG I+ D
Sbjct: 61  TSPLGWWTLKPRPKEEKELAHLYERREFPYPGDEEAMQEFIAKGGMVGTTIGPKGYIETD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KD+FNYQKEL+  K EQEAQKLW RMRNEVI ELQ KGYDVE
Sbjct: 121 KDAFNYQKELQNKKFEQEAQKLWLRMRNEVIQELQEKGYDVE 162

[Close]

BLAST of Carg12410 vs. TrEMBL
Match: tr|A0A2I0IV27|A0A2I0IV27_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_031799 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.8e-71
Identity = 127/162 (78.40%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 1   MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNE 60
           M+RKRFQEAKTG+  +KSM AE+ L K+G+GREDRYFWKQIGKALL +YT+IG  WLYNE
Sbjct: 1   MVRKRFQEAKTGIAYIKSMDAEKILSKIGMGREDRYFWKQIGKALLCTYTIIGAVWLYNE 60

Query: 61  TSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFD 120
           TSP GWWTLKPR K EK+LAHLYERREFPYPGD+EAME+FIAKGGMIGTAIGPKG ++ D
Sbjct: 61  TSPLGWWTLKPRPKEEKELAHLYERREFPYPGDKEAMEEFIAKGGMIGTAIGPKGSVESD 120

Query: 121 KDSFNYQKELEKNKLEQEAQKLWFRMRNEVISELQGKGYDVE 163
           KD++NYQKEL+  K EQEAQKLWFRMRNEVI ELQ KGYD+E
Sbjct: 121 KDAYNYQKELQTKKFEQEAQKLWFRMRNEVIQELQEKGYDIE 162

The following BLAST results are available for this feature:

BLAST of Carg12410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948350.1	6.5e-88	100.00	uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948351.1 unchar...	[more]
XP_022998684.1	2.5e-87	99.38	uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998685.1 uncharac...	[more]
XP_023523491.1	1.2e-86	98.15	uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo] >XP_023523492....	[more]
XP_004154327.1	3.1e-82	91.98	PREDICTED: uncharacterized protein LOC101221969 [Cucumis sativus] >XP_011658438....	[more]
XP_022965021.1	5.3e-82	92.59	uncharacterized protein LOC111464959 [Cucurbita moschata] >XP_022965022.1 unchar...	[more]

BLAST of Carg12410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58920.1	8.2e-69	70.37	unknown protein	[more]

BLAST of Carg12410 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12410 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LY68\|A0A0A0LY68_CUCSA	2.1e-82	91.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528470 PE=4 SV=1	[more]
tr\|A0A1S3C5F1\|A0A1S3C5F1_CUCME	4.3e-80	89.51	uncharacterized protein LOC103497102 OS=Cucumis melo OX=3656 GN=LOC103497102 PE=...	[more]
tr\|A0A2P4J0A6\|A0A2P4J0A6_QUESU	6.7e-73	81.48	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_46938 PE=4 SV=1	[more]
tr\|A0A2I4H027\|A0A2I4H027_9ROSI	1.6e-71	79.63	uncharacterized protein LOC109012364 OS=Juglans regia OX=51240 GN=LOC109012364 P...	[more]
tr\|A0A2I0IV27\|A0A2I0IV27_PUNGR	2.8e-71	78.40	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_031799 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12410-RA	Carg12410-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36077	FAMILY NOT NAMED	coord: 1..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12410	Cla008190	Watermelon (97103) v1	carwmB0440
Carg12410	Csa1G528470	Cucumber (Chinese Long) v2	carcuB0471
Carg12410	MELO3C020577	Melon (DHL92) v3.5.1	carmeB0449
Carg12410	ClCG03G001010	Watermelon (Charleston Gray)	carwcgB0436
Carg12410	CSPI01G23620	Wild cucumber (PI 183967)	carcpiB0476
Carg12410	CmaCh13G000860	Cucurbita maxima (Rimu)	carcmaB0610
Carg12410	CmaCh01G006420	Cucurbita maxima (Rimu)	carcmaB0613
Carg12410	CmoCh13G000820	Cucurbita moschata (Rifu)	carcmoB0594
Carg12410	CmoCh01G006760	Cucurbita moschata (Rifu)	carcmoB0596
Carg12410	Lsi02G013100	Bottle gourd (USVL1VR-Ls)	carlsiB403
Carg12410	Cp4.1LG02g11530	Cucurbita pepo (Zucchini)	carcpeB0623
Carg12410	Cp4.1LG20g08190	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12410	CsGy1G023090	Cucumber (Gy14) v2	carcgybB0448
Carg12410	MELO3C020577.2	Melon (DHL92) v3.6.1	carmedB0451
Carg12410	CsaV3_1G035930	Cucumber (Chinese Long) v3	carcucB0472
Carg12410	Cla97C03G051810	Watermelon (97103) v2	carwmbB0467
Carg12410	Bhi08G000451	Wax gourd	carwgoB0535

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12410	Carg20622	Silver-seed gourd	carcarB408

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12410	Silver-seed gourd	carcarB192
Carg12410	Silver-seed gourd	carcarB449
Carg12410	Cucumber (Gy14) v2	carcgybB0450
Carg12410	Cucumber (Gy14) v1	carcgyB0509
Carg12410	Cucumber (Gy14) v1	carcgyB0510
Carg12410	Cucurbita maxima (Rimu)	carcmaB0612
Carg12410	Cucurbita moschata (Rifu)	carcmoB0595
Carg12410	Cucurbita pepo (Zucchini)	carcpeB0619
Carg12410	Cucurbita pepo (Zucchini)	carcpeB0621
Carg12410	Wild cucumber (PI 183967)	carcpiB0478
Carg12410	Cucumber (Chinese Long) v2	carcuB0473
Carg12410	Cucumber (Chinese Long) v3	carcucB0475
Carg12410	Melon (DHL92) v3.5.1	carmeB0450
Carg12410	Melon (DHL92) v3.6.1	carmedB0453
Carg12410	Watermelon (Charleston Gray)	carwcgB0431
Carg12410	Watermelon (97103) v1	carwmB0438
Carg12410	Watermelon (97103) v2	carwmbB0463