Carg25150-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTCCGATTCGGCTCACGCCTTGTCGTACTCATATCCTCCCCCTCAGCCGTTCAAGAATGCTTCACAAAAAACGACATCATTCTCGCAAATCGCCCATTGCTCGACACCGGAAAGTACTTAGCATACAACCACACAACCCTCGCCGTCTCACCTTACGGCGAGCACTGGCGCAACCTCCGCCGGATTTGCTCCCTCGAGATATTCTCAACCAACCGCCTCAATATGTTCGTGGGTATCCGAGAAAATGAAGTGAAACGGTTGCTGAGGAAGTTATGTGGGGATTGGTCGGATGAGTTTAAGGAAGTGGAAGTGGAGCCAATGTTGTCGGATCTTACTTTCAACGTTGTTATGGGAATGGTGGGTGGAAGGAGGTTTTATGATGAGGGGTATTCGAAGAAGTTTAGAGATTTGGTGACACAAATTATGGCGCATGGTGGGTCATCGAATCCGGGTGATTTCATACCCTTGTGGAATTGGGTTGATCCAACTGGTTTTAAGAAGAGGATAATGAATCTTGCACGAAGAGGAGATGAACTTCTTCAAGAACTAATTGATGAAGCTCGAGATGGAAAGGATGGAGGGAACACTATGATTCATCATTTACTTTGCTTGCAGAAAGATGAGCCGGAGTATTATAGTGACCTTATTATCAAAGGACTTATTCAAGTACTTCTCTCTCCCTCTCTACTCTTTTCTTTATGTTTTTTTTTTCTTTTTAAGTTCACAAGTTCATGAATGTTGTGGGCATATATTGACATTTATTTGATTCATAACTCTGATTTAGTTCATAACCCTCTCTCATTTTGATTCATGAATCATCTGTGCCTATATAAAGAGATGTATTGAGTTTGATTGAGTTTGAATGTTATTTTGTATTTGTTGAGTGACATTTGGGAGGAACTTTGTTGAGAGATAGTGTGAGCGTGTGAGATATACACTTCGTAAATATTTTGATTATTGAGATTGGTTGCTATCCGTGGATATAAGGGAATTTCTTCGCTCTAACCTAAGTAAATTTTTTGGAGGAACTTTGTTAAGAGATTTTGTAGTGTGAGAGTGTGAAATATAGACTTTATAAACACTTTCATTATTGAGAATGATGGCTCTTTGGGGATGTAGGGAAATTTTTTTGTCTCCGAACCACGAAATTTTTTGGAGGAATTTAGTTGAGAGATTTTATAGCGTGAGAGTGTGAAATATACACGTTTTAAACACTTTGATTATTGAGATTGGTCGTAAATTTGTTGGAGGAACTTAGTTAAGAGATTTTACAACGTGAGAGTGAAATATACATGTTGTAAGCACCTTGATTATTGAGATTGGTCGTTATTCATGGATATAGGGGAATGTCTTCTCTCCGAACAACGTAAATTTTTTGGAGGAACTTTGTTGAGAGATTTTATAGCGTGAGAGTATGAGATATAGACTTTGTAAACACTTCGATTATTGAGATTGATTGCTGTCCGTGGATGTAAGAAAATTTTTTCTTTCTGAATCACGTGAATTTTTGTCTCTTTGGTTAATTTATGTTTATGGTGTATGAGTACAACCAATCTTATTTTTGCTTCCACTACAACATGTTTGTCCATTTATAATCTAAATGTTTGGTTCTTCGTTGTAGGTTATATTCTTAGCGGGGATTGACACGTCAGCTGTGACATTAGAATGGGCGCTATCGCATTTGCTCAACAATCCAGACGTGTTAAAGAAAGCAAGAGCTGAGATAGATGATTTGGTAGGGAAAGAGCGGCTAGTGAATGAAAGTGATCTTCCAAATTTAAAGTATCTTCAAGGAATAATCTCAGAGACATTGCGGTTGAACCCAGCAGCTCCTCTTCTTGTGCCACACTGTGCATTTCAAGACTGCAAAATAGAAGGATATGATGTTCCTCGTGACACAATTGTATTGATCAATGCTTGGGCTATACATAGAGACCCAAATCTATGGGAAGATCCCACGGCGTTTAAACCAGAAAGACATGGTGACACGAGTGGAGCTGATTCTTACAAGCTATTGCCATTTGGGTTGGGGCGGAGAGCTTGTCCTGGTGTGGGAATGGCGCAACGTGTGGTTGGCTTAGCTTTAGCTTCGTTGATACAAGGCTTTGAATGGGAAAGAGTGAGCAGCTCGTTGGTTGATATGAGTGAAGGTCAAGGGCTCACTATGCCCAAAGCTCAACCTTTGGTAGCCAAGTGTAAGCCACGACCAATCATGAAAGCCATTATGAACGTAGAAATTGATAATATTTGAAATAACTTCCAAAACCAATAAAACAAATTATAATATTTGTTCTTATTGATTGATAGTGATTGATAGGCATAATGAGATGTTCTATCCTGCATGCTTTCTAGGGAATCAGATCAACATAATAAAGCCATTCACACGTTAAAGTTCAAACAGATTATTCAAAACAATTAGAATCAAAATCATAGTAGTAAAGACCATAATTCAAGCATACGAGCTAAATTGGTCAAATTTCCCTTTTACTAAGTTTAAATCTTTAATTCCTTGCTTAAAGTAGTCATATAATATGTCCATAGTCATTTTTTCCAAGTCCTAGTCGATTCCTACAAATATTTTTTCAAGTTATCCAAAAGGTTATTTATATGCTTGGAAATGTTCTGGGGTTCAACTCTCTCAGGTTTTCCGAACTTCAAATCCTAAAATGATTACATGCTTGGACATGTTCTGGGGCTCAGCTCTCTCAGGTTTTCCAAACTCCAAATCCTAAAATGAGTAAAAAAAAACAAGAACGGTTCTCGATTGAGTTGAGGTCCAAATAAACTAAAAATTATCATTGATTTAAGAAAAGTAAGATTCGACTTGACATGACTCCCAATCACTCCTAGTTGACCAGCTAAGCCAACATACAACCTCAATTGTCTATGTCTTATTCTTATCTTTAGTCATTTCATGCATAA ATGTCTCTCCGATTCGGCTCACGCCTTGTCGTACTCATATCCTCCCCCTCAGCCGTTCAAGAATGCTTCACAAAAAACGACATCATTCTCGCAAATCGCCCATTGCTCGACACCGGAAAGTACTTAGCATACAACCACACAACCCTCGCCGTCTCACCTTACGGCGAGCACTGGCGCAACCTCCGCCGGATTTGCTCCCTCGAGATATTCTCAACCAACCGCCTCAATATGTTCGTGGGTATCCGAGAAAATGAAGTGAAACGGTTGCTGAGGAAGTTATGTGGGGATTGGTCGGATGAGTTTAAGGAAGTGGAAGTGGAGCCAATGTTGTCGGATCTTACTTTCAACGTTGTTATGGGAATGGTGGGTGGAAGGAGGTTTTATGATGAGGGGTATTCGAAGAAGTTTAGAGATTTGGTGACACAAATTATGGCGCATGGTGGGTCATCGAATCCGGGTGATTTCATACCCTTGTGGAATTGGGTTGATCCAACTGGTTTTAAGAAGAGGATAATGAATCTTGCACGAAGAGGAGATGAACTTCTTCAAGAACTAATTGATGAAGCTCGAGATGGAAAGGATGGAGGGAACACTATGATTCATCATTTACTTTGCTTGCAGAAAGATGAGCCGGAGTATTATAGTGACCTTATTATCAAAGGACTTATTCAATCATTTCATGCATAA ATGTCTCTCCGATTCGGCTCACGCCTTGTCGTACTCATATCCTCCCCCTCAGCCGTTCAAGAATGCTTCACAAAAAACGACATCATTCTCGCAAATCGCCCATTGCTCGACACCGGAAAGTACTTAGCATACAACCACACAACCCTCGCCGTCTCACCTTACGGCGAGCACTGGCGCAACCTCCGCCGGATTTGCTCCCTCGAGATATTCTCAACCAACCGCCTCAATATGTTCGTGGGTATCCGAGAAAATGAAGTGAAACGGTTGCTGAGGAAGTTATGTGGGGATTGGTCGGATGAGTTTAAGGAAGTGGAAGTGGAGCCAATGTTGTCGGATCTTACTTTCAACGTTGTTATGGGAATGGTGGGTGGAAGGAGGTTTTATGATGAGGGGTATTCGAAGAAGTTTAGAGATTTGGTGACACAAATTATGGCGCATGGTGGGTCATCGAATCCGGGTGATTTCATACCCTTGTGGAATTGGGTTGATCCAACTGGTTTTAAGAAGAGGATAATGAATCTTGCACGAAGAGGAGATGAACTTCTTCAAGAACTAATTGATGAAGCTCGAGATGGAAAGGATGGAGGGAACACTATGATTCATCATTTACTTTGCTTGCAGAAAGATGAGCCGGAGTATTATAGTGACCTTATTATCAAAGGACTTATTCAATCATTTCATGCATAA MSLRFGSRLVVLISSPSAVQECFTKNDIILANRPLLDTGKYLAYNHTTLAVSPYGEHWRNLRRICSLEIFSTNRLNMFVGIRENEVKRLLRKLCGDWSDEFKEVEVEPMLSDLTFNVVMGMVGGRRFYDEGYSKKFRDLVTQIMAHGGSSNPGDFIPLWNWVDPTGFKKRIMNLARRGDELLQELIDEARDGKDGGNTMIHHLLCLQKDEPEYYSDLIIKGLIQSFHA
BLAST of Carg25150-RA vs. NCBI nr
Match: XP_022947035.1 (cytochrome P450 81F3 [Cucurbita moschata]) HSP 1 Score: 462.2 bits (1188), Expect = 1.0e-126 Identity = 219/224 (97.77%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Carg25150-RA vs. NCBI nr
Match: XP_023007415.1 (cytochrome P450 81F3-like [Cucurbita maxima]) HSP 1 Score: 454.9 bits (1169), Expect = 1.6e-124 Identity = 214/224 (95.54%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Carg25150-RA vs. NCBI nr
Match: XP_023532689.1 (cytochrome P450 81F3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532690.1 cytochrome P450 81F3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 452.2 bits (1162), Expect = 1.0e-123 Identity = 214/224 (95.54%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of Carg25150-RA vs. NCBI nr
Match: XP_022149455.1 (cytochrome P450 81E8-like [Momordica charantia]) HSP 1 Score: 354.8 bits (909), Expect = 2.3e-94 Identity = 163/223 (73.09%), Postives = 197/223 (88.34%), Query Frame = 0
BLAST of Carg25150-RA vs. NCBI nr
Match: XP_022149460.1 (isoflavone 2'-hydroxylase-like [Momordica charantia]) HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90 Identity = 159/228 (69.74%), Postives = 195/228 (85.53%), Query Frame = 0
BLAST of Carg25150-RA vs. TAIR10
Match: AT4G37370.1 (cytochrome P450, family 81, subfamily D, polypeptide 8) HSP 1 Score: 228.8 bits (582), Expect = 3.4e-60 Identity = 109/225 (48.44%), Postives = 162/225 (72.00%), Query Frame = 0
BLAST of Carg25150-RA vs. TAIR10
Match: AT4G37400.1 (cytochrome P450, family 81, subfamily F, polypeptide 3) HSP 1 Score: 228.8 bits (582), Expect = 3.4e-60 Identity = 117/228 (51.32%), Postives = 166/228 (72.81%), Query Frame = 0
BLAST of Carg25150-RA vs. TAIR10
Match: AT2G23220.1 (cytochrome P450, family 81, subfamily D, polypeptide 6) HSP 1 Score: 227.3 bits (578), Expect = 9.8e-60 Identity = 107/226 (47.35%), Postives = 158/226 (69.91%), Query Frame = 0
BLAST of Carg25150-RA vs. TAIR10
Match: AT4G37310.1 (cytochrome P450, family 81, subfamily H, polypeptide 1) HSP 1 Score: 226.5 bits (576), Expect = 1.7e-59 Identity = 119/232 (51.29%), Postives = 153/232 (65.95%), Query Frame = 0
BLAST of Carg25150-RA vs. TAIR10
Match: AT2G23190.1 (cytochrome P450, family 81, subfamily D, polypeptide 7) HSP 1 Score: 224.6 bits (571), Expect = 6.4e-59 Identity = 106/227 (46.70%), Postives = 154/227 (67.84%), Query Frame = 0
BLAST of Carg25150-RA vs. Swiss-Prot
Match: sp|Q6WNQ8|C81E8_MEDTR (Cytochrome P450 81E8 OS=Medicago truncatula OX=3880 GN=CYP81E8 PE=2 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.3e-65 Identity = 120/229 (52.40%), Postives = 163/229 (71.18%), Query Frame = 0
BLAST of Carg25150-RA vs. Swiss-Prot
Match: sp|Q6WNQ9|C81E9_MEDTR (Isoflavone 3'-hydroxylase (Fragment) OS=Medicago truncatula OX=3880 GN=CYP81E9 PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 7.7e-62 Identity = 119/235 (50.64%), Postives = 165/235 (70.21%), Query Frame = 0
BLAST of Carg25150-RA vs. Swiss-Prot
Match: sp|P93147|C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata OX=46348 GN=CYP81E1 PE=1 SV=2) HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59 Identity = 110/228 (48.25%), Postives = 158/228 (69.30%), Query Frame = 0
BLAST of Carg25150-RA vs. Swiss-Prot
Match: sp|Q0WTF4|C81F3_ARATH (Cytochrome P450 81F3 OS=Arabidopsis thaliana OX=3702 GN=CYP81F3 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 6.1e-59 Identity = 117/228 (51.32%), Postives = 166/228 (72.81%), Query Frame = 0
BLAST of Carg25150-RA vs. Swiss-Prot
Match: sp|Q6WNR0|C81E7_MEDTR (Isoflavone 2'-hydroxylase OS=Medicago truncatula OX=3880 GN=CYP81E7 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 8.0e-59 Identity = 109/229 (47.60%), Postives = 156/229 (68.12%), Query Frame = 0
BLAST of Carg25150-RA vs. TrEMBL
Match: tr|A0A0A0LQI5|A0A0A0LQI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423640 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.3e-90 Identity = 165/236 (69.92%), Postives = 195/236 (82.63%), Query Frame = 0
BLAST of Carg25150-RA vs. TrEMBL
Match: tr|A0A1S3C323|A0A1S3C323_CUCME (cytochrome P450 81D1-like OS=Cucumis melo OX=3656 GN=LOC103495924 PE=3 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 6.1e-88 Identity = 156/227 (68.72%), Postives = 186/227 (81.94%), Query Frame = 0
BLAST of Carg25150-RA vs. TrEMBL
Match: tr|A0A1S3C1S2|A0A1S3C1S2_CUCME (LOW QUALITY PROTEIN: isoflavone 3'-hydroxylase-like OS=Cucumis melo OX=3656 GN=LOC103495921 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.0e-87 Identity = 161/234 (68.80%), Postives = 192/234 (82.05%), Query Frame = 0
BLAST of Carg25150-RA vs. TrEMBL
Match: tr|A0A0A0LNA4|A0A0A0LNA4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425750 PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 2.9e-82 Identity = 154/226 (68.14%), Postives = 187/226 (82.74%), Query Frame = 0
BLAST of Carg25150-RA vs. TrEMBL
Match: tr|A0A0A0LTD0|A0A0A0LTD0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G425740 PE=3 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.0e-78 Identity = 146/231 (63.20%), Postives = 181/231 (78.35%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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