Carg00708 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00708
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_014 : 1063396 .. 1065234 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGCTGTGATTCATCGGTGGGTAGCATTTTTAAAGGGCTACTGAGATCTGCCACTCGCTTTCTCCTTTCTGGATCCATTTCGAGCTTCTTCTTCAGTTCTTAGGGAGAAGGGTGTAGTGAGCTCAGAGTTGGAAAGATGGCGAGCGGCGGTGGATATGGGGATGCCAATCAGAAGATAGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGGAAATCTCAGATTTTGGCGCGGTTTGCCCGAAACGAGTTCAGCTTGGACTCCAAGGCCACTATCGGCGTCGAGTTTCAGACTAGGACACTCGTTATTCAGCATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGGTACTTTTTCCTCCACTTCCTTTCTTTTCTCTTGTATTTCCCTCTTGTTTGGTTTTTAGGGTTTTAGTGGATCTTTAATGTGTTGGATTTGGGGCAGAGTATAGTGGATGATGATGCCCTTAGTACTATTGAATTTCATTTGTCTAGTAGTTGGTACTGGTATAAAGGCCAGATTATTCTCTCTTTATACTTGCATGGAATCAGATTACTTGTTGGGTGAAATGTTTATCATCCAGTATTGTCTGTTCCTACTTTCATGGAATGAGCTTGAGCAGCATCTTTCATGTAGTTTTCATAAACAATGGCCTTGTTGATATTCATTTGTTGTAAGATTGTCCTGTGGATTTGCGTTTTTTTTTTTTCTCCTCATGCTCCCATTCAGTCTTGTGATTCTTCCTTTAGCTTGTCTCGAAGCTTAACTATGTTGGATTTGATCCCTTAGAATGGAACTTTTATAGCTGGTTTTTGGAGTTTAAGTTAAACGATTATTATATACAGCTAAGACAATATTCCATTGAAGGCCATAGAAAAGCTGCATACCTTAACACATCGAGTATTTGAACAGATACAGAGCAGTTACAAGTGCATATTACAGAGGAGCTCTTGGGGCAATGCTTGTCTACGATATTACGAAACGCCAAACCTTTGATCACATACCTCGGTGGCTCGAGGAGTTGCGGAGCCATGCTGACAAGAACATCGTTATAATCTTAATAGGAAACAAAAGCGATCTGGAAGACCAGCGTGCTGTCTCCACTGAGGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCCGCACTGGAATCAACCAACGTGGAGAGTGCCTTCATGACTATCCTAACTGAGATCTTCAACATCATGAACAAAAAGAACTTGGCTGCTGGTGAAACTCAAGGCAATGGCAACTCTGCATCACTTGCCGGTGGTAAGAAGATCATAATCCCGGGCCCAGCGCAAGAAATCCCGGCTAGGAGCAAGATGTGCTGTACTTCCACATGATTTGTTCGGAGTTAGGCTCAAATGGGGCGATCTAGGTTGGTGCATTCCATGATTATAGCAATTTTTTTTTTTACTGGTGTGATGTTTTTCTGAGGTCATTTGTATATTTTGTTGTATGCTTTAGTCTGCTAGAGCTAGCAGCTGGAGTTTATATATACTTTGAAGGACGACAAATGAGGCTCTCGTTTACCTTTTTTTCAAAATAGAAGCTGTCTTTATTTACTGGAATATGAGAAAATCTGAAGTTAACATCATGTGATTGTGCGTACTATAAAAACTTACTATTTGTTGTCTTAAGAAGTTTGTTCCAAGGTTGGTTAATAATATGAATCTAGGAGTGCTTGGAACATTTGATTGGGCAGTGACTGCAACCCCCACCCCCTTGGATTATAGATCTTGTAATAATGCGTATTATACAAAAATAAATGAGAATCCGAAGTATGAGTTATCGTA

mRNA sequence

TCTGCTGTGATTCATCGGTGGGTAGCATTTTTAAAGGGCTACTGAGATCTGCCACTCGCTTTCTCCTTTCTGGATCCATTTCGAGCTTCTTCTTCAGTTCTTAGGGAGAAGGGTGTAGTGAGCTCAGAGTTGGAAAGATGGCGAGCGGCGGTGGATATGGGGATGCCAATCAGAAGATAGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGGAAATCTCAGATTTTGGCGCGGTTTGCCCGAAACGAGTTCAGCTTGGACTCCAAGGCCACTATCGGCGTCGAGTTTCAGACTAGGACACTCGTTATTCAGCATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGATACAGAGCAGTTACAAGTGCATATTACAGAGGAGCTCTTGGGGCAATGCTTGTCTACGATATTACGAAACGCCAAACCTTTGATCACATACCTCGGTGGCTCGAGGAGTTGCGGAGCCATGCTGACAAGAACATCGTTATAATCTTAATAGGAAACAAAAGCGATCTGGAAGACCAGCGTGCTGTCTCCACTGAGGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCCGCACTGGAATCAACCAACGTGGAGAGTGCCTTCATGACTATCCTAACTGAGATCTTCAACATCATGAACAAAAAGAACTTGGCTGCTGGTGAAACTCAAGGCAATGGCAACTCTGCATCACTTGCCGGTGGTAAGAAGATCATAATCCCGGGCCCAGCGCAAGAAATCCCGGCTAGGAGCAAGATGTGCTGTACTTCCACATGATTTGTTCGGAGTTAGGCTCAAATGGGGCGATCTAGGTTGGTGCATTCCATGATTATAGCAATTTTTTTTTTTACTGGTGTGATGTTTTTCTGAGGTCATTTGTATATTTTGTTGTATGCTTTAGTCTGCTAGAGCTAGCAGCTGGAGTTTATATATACTTTGAAGGACGACAAATGAGGCTCTCGTTTACCTTTTTTTCAAAATAGAAGCTGTCTTTATTTACTGGAATATGAGAAAATCTGAAGTTAACATCATGTGATTGTGCGTACTATAAAAACTTACTATTTGTTGTCTTAAGAAGTTTGTTCCAAGGTTGGTTAATAATATGAATCTAGGAGTGCTTGGAACATTTGATTGGGCAGTGACTGCAACCCCCACCCCCTTGGATTATAGATCTTGTAATAATGCGTATTATACAAAAATAAATGAGAATCCGAAGTATGAGTTATCGTA

Coding sequence (CDS)

ATGGCGAGCGGCGGTGGATATGGGGATGCCAATCAGAAGATAGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGGAAATCTCAGATTTTGGCGCGGTTTGCCCGAAACGAGTTCAGCTTGGACTCCAAGGCCACTATCGGCGTCGAGTTTCAGACTAGGACACTCGTTATTCAGCATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGATACAGAGCAGTTACAAGTGCATATTACAGAGGAGCTCTTGGGGCAATGCTTGTCTACGATATTACGAAACGCCAAACCTTTGATCACATACCTCGGTGGCTCGAGGAGTTGCGGAGCCATGCTGACAAGAACATCGTTATAATCTTAATAGGAAACAAAAGCGATCTGGAAGACCAGCGTGCTGTCTCCACTGAGGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCCGCACTGGAATCAACCAACGTGGAGAGTGCCTTCATGACTATCCTAACTGAGATCTTCAACATCATGAACAAAAAGAACTTGGCTGCTGGTGAAACTCAAGGCAATGGCAACTCTGCATCACTTGCCGGTGGTAAGAAGATCATAATCCCGGGCCCAGCGCAAGAAATCCCGGCTAGGAGCAAGATGTGCTGTACTTCCACATGA

Protein sequence

MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST

Homology

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BLAST of Carg00708 vs. NCBI nr
Match: XP_022950001.1 (ras-related protein Rab11A [Cucurbita moschata] >XP_023543672.1 ras-related protein Rab11A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 1.1e-120
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPA+SKMCCTST
Sbjct: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

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BLAST of Carg00708 vs. NCBI nr
Match: XP_022978553.1 (ras-related protein Rab11A [Cucurbita maxima])

HSP 1 Score: 441.8 bits (1135), Expect = 1.4e-120
Identity = 225/227 (99.12%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMT+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPA+SKMCCTST
Sbjct: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

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BLAST of Carg00708 vs. NCBI nr
Match: XP_022962973.1 (ras-related protein Rab11A-like [Cucurbita moschata])

HSP 1 Score: 435.6 bits (1119), Expect = 1.0e-118
Identity = 221/227 (97.36%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIPA+SKMCCTST
Sbjct: 181 IMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKMCCTST 227

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BLAST of Carg00708 vs. NCBI nr
Match: XP_023003097.1 (ras-related protein Rab11A-like [Cucurbita maxima])

HSP 1 Score: 434.1 bits (1115), Expect = 2.9e-118
Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIP +SKMCCTST
Sbjct: 181 IMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPTKSKMCCTST 227

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BLAST of Carg00708 vs. NCBI nr
Match: XP_008440578.1 (PREDICTED: ras-related protein Rab11A [Cucumis melo] >XP_008440579.1 PREDICTED: ras-related protein Rab11A [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 219/227 (96.48%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMN+KNLAAGE QGNGNSASLAGGKKIIIPGPAQEIPA+SKMCC+ST
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCSST 227

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BLAST of Carg00708 vs. TAIR10
Match: AT5G65270.1 (RAB GTPase homolog A4A)

HSP 1 Score: 379.8 bits (974), Expect = 1.2e-105
Identity = 192/226 (84.96%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           M SGGGYGD +QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1   MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDIT+RQTFDHIPRWLEELR+HAD
Sbjct: 61  IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDL DQRA+ TEDAKEFAEKEGLFFLETSA  +TNVESAF T+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           I+NKK+LAA E Q NGN  SLAG K  I+PGP Q IP +S MCC S
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

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BLAST of Carg00708 vs. TAIR10
Match: AT4G39990.1 (RAB GTPase homolog A4B)

HSP 1 Score: 357.5 bits (916), Expect = 6.3e-99
Identity = 177/227 (77.97%), Postives = 205/227 (90.31%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MA GGGYG A+ K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL 
Sbjct: 1   MAGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLS 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+ KS+KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKR+TF+HIPRWLEELR+HAD
Sbjct: 61  IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSAL +TNVE++F T++T+I+N
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
            +NKKNLA   ++G+ N+     GKKI+IPG  QEIPA++  CCTS+
Sbjct: 181 TVNKKNLA---SEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Carg00708 vs. TAIR10
Match: AT3G12160.1 (RAB GTPase homolog A4D)

HSP 1 Score: 313.9 bits (803), Expect = 8.0e-86
Identity = 162/217 (74.65%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 7   YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
           YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TLVI +K+V
Sbjct: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64

Query: 67  KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
           KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ +WLEELR HADKNIVI+
Sbjct: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 124

Query: 127 LIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKN 186
           LIGNK DL   RAV TEDA+EFA++E LFF+ETSALE+TNVE+AF+TILTEI+ I++KK+
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184

Query: 187 LAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMC 224
           L A +   +GNS SL  G +IIIP   QE   R   C
Sbjct: 185 LTADDDDADGNS-SLLKGTRIIIPS-EQESGKRGGCC 219

[Close]

BLAST of Carg00708 vs. TAIR10
Match: AT5G47960.1 (RAB GTPase homolog A4C)

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-85
Identity = 156/214 (72.90%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 11  NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
           NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEFS++SKATIGVEFQTRTL I  K++KAQI
Sbjct: 9   NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68

Query: 71  WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGN 130
           WDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQ+FDH+ RWLEELR HADKNIVI+LIGN
Sbjct: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128

Query: 131 KSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAG 190
           K+DL   RAV TEDAKEFA++E LFF+ETSAL+S NVE +F+T+LTEI+ I++KKNL A 
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188

Query: 191 ETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCC 225
           E   +G  +SL  G KI++ G  +E  ++ K CC
Sbjct: 189 EEGESGGDSSLLQGTKIVVAG--EETESKGKGCC 220

[Close]

BLAST of Carg00708 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 265.0 bits (676), Expect = 4.2e-71
Identity = 131/217 (60.37%), Postives = 175/217 (80.65%), Query Frame = 0


Query: 11  NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
           +++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 71  WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGN 130
           WDTAGQERYRA+TSAYYRGALGA+LVYD+TK  TF+++ RWL+ELR HAD NIVI+LIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 131 KSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAG 190
           K+DL+  RAV+TEDA+ +AEKEGL F+ETSALE+ NVE AF TIL+E++ I++KK++++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 191 ETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           +T  N N   +  G+ I +   ++      K CC+S+
Sbjct: 186 QTTANAN---IKEGQTIDVAATSES--NAKKPCCSSS 217

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BLAST of Carg00708 vs. Swiss-Prot
Match: sp|Q40191|RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 5.4e-108
Identity = 199/227 (87.67%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDAN KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I HK+VKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELR+HAD
Sbjct: 61  IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNK DL +QR V TEDAKEFAEKEGLFFLETSALE+TNVESAF T+LTEI+N
Sbjct: 121 KNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           I+NKK+LAA E+QGNGNSASL+ G+KIIIPGPAQEIPA+  MCC ++
Sbjct: 181 IVNKKSLAADESQGNGNSASLS-GQKIIIPGPAQEIPAKRNMCCQAS 226

[Close]

BLAST of Carg00708 vs. Swiss-Prot
Match: sp|Q9FJN8|RAA4A_ARATH (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.1e-104
Identity = 192/226 (84.96%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           M SGGGYGD +QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1   MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDIT+RQTFDHIPRWLEELR+HAD
Sbjct: 61  IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDL DQRA+ TEDAKEFAEKEGLFFLETSA  +TNVESAF T+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           I+NKK+LAA E Q NGN  SLAG K  I+PGP Q IP +S MCC S
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Carg00708 vs. Swiss-Prot
Match: sp|Q40522|RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.2e-103
Identity = 189/221 (85.52%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 6   GYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
           GYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL IQHKS
Sbjct: 4   GYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKS 63

Query: 66  VKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVI 125
           VKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELR+HAD+NIVI
Sbjct: 64  VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVI 123

Query: 126 ILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKK 185
           +LIGNK+DLEDQRAV TEDAKEFA+KEGLFFLETSA+E+TN+E AF+T+LTEIFNI+NKK
Sbjct: 124 MLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKK 183

Query: 186 NLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           NLAA + Q NGN ASL  GKKI++PGP Q IP + K CC+S
Sbjct: 184 NLAADDNQSNGNPASLT-GKKILVPGPGQVIPEK-KACCSS 222

[Close]

BLAST of Carg00708 vs. Swiss-Prot
Match: sp|Q40520|RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 187/221 (84.62%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 6   GYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
           GYGDA+QKIDYVFKVVLIGDSAVGK+QILARFARNEFSLDSKATIGVEFQTRTLVIQHKS
Sbjct: 4   GYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 63

Query: 66  VKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVI 125
           VKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELR+HAD+NIVI
Sbjct: 64  VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVI 123

Query: 126 ILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKK 185
           +L GNK+DLEDQRAV TEDAKEFA+KEGLFFLETSA+E+T +E AF+T+LTEIFNI+NKK
Sbjct: 124 MLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKK 183

Query: 186 NLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           NLAA E Q N N ASL  GKKI++PGP Q IP + K CC+S
Sbjct: 184 NLAADENQSNSNPASLT-GKKILVPGPGQVIPGK-KACCSS 222

[Close]

BLAST of Carg00708 vs. Swiss-Prot
Match: sp|Q9SMQ6|RAA4B_ARATH (Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 177/227 (77.97%), Postives = 205/227 (90.31%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MA GGGYG A+ K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL 
Sbjct: 1   MAGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLS 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+ KS+KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKR+TF+HIPRWLEELR+HAD
Sbjct: 61  IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSAL +TNVE++F T++T+I+N
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
            +NKKNLA   ++G+ N+     GKKI+IPG  QEIPA++  CCTS+
Sbjct: 181 TVNKKNLA---SEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Carg00708 vs. TrEMBL
Match: tr|A0A1S3B108|A0A1S3B108_CUCME (ras-related protein Rab11A OS=Cucumis melo OX=3656 GN=LOC103484955 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 7.3e-118
Identity = 219/227 (96.48%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMN+KNLAAGE QGNGNSASLAGGKKIIIPGPAQEIPA+SKMCC+ST
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCSST 227

[Close]

BLAST of Carg00708 vs. TrEMBL
Match: tr|A0A0A0KIU6|A0A0A0KIU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499780 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 6.2e-117
Identity = 217/226 (96.02%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           IMN+KNLAAGE QGNGNSASLAGGKKIIIPGPAQEIPA+SKMCC++
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCST 226

[Close]

BLAST of Carg00708 vs. TrEMBL
Match: tr|A0A2P5ABH7|A0A2P5ABH7_PARAD (Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_348930 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.6e-110
Identity = 204/227 (89.87%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNK+DLE+QRAV TEDAKEFA+KEGLFFLETSALESTNVE+AF+T+LTEIFN
Sbjct: 121 KNIVIILIGNKTDLENQRAVPTEDAKEFAQKEGLFFLETSALESTNVENAFLTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           I+NKKNLAAGE QGNGN A+L  GKKII+PGPAQ IP +++MCCTS+
Sbjct: 181 ILNKKNLAAGENQGNGNPANLT-GKKIIVPGPAQVIPEKNRMCCTSS 226

[Close]

BLAST of Carg00708 vs. TrEMBL
Match: tr|A0A2P5EZE2|A0A2P5EZE2_9ROSA (Small GTP-binding domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_133070 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 7.3e-110
Identity = 204/227 (89.87%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNK+DLE+QRAV TEDAKEFA+KEGLFFLETSALESTNVE+AF+T+LTEIFN
Sbjct: 121 KNIVIILIGNKTDLENQRAVPTEDAKEFAQKEGLFFLETSALESTNVENAFLTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           I+NKKNLAAGE QGNGN A+L  GKKII+PGPAQ IP +++MCCTS+
Sbjct: 181 IVNKKNLAAGENQGNGNPANLT-GKKIIVPGPAQVIPEKNRMCCTSS 226

[Close]

BLAST of Carg00708 vs. TrEMBL
Match: tr|M5WJR3|M5WJR3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G191600 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.3e-109
Identity = 203/226 (89.82%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGD+NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL+
Sbjct: 1   MASGGGYGDSNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLI 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQ+FDHIPRWLEELRSHAD
Sbjct: 61  IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLE+QR + TEDAKEFA+KEGLFFLETSALESTNVESAF+T+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLENQRVIPTEDAKEFAQKEGLFFLETSALESTNVESAFLTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           I+NKK+LAA E Q NGN ASL+ GKKI+IPGPAQEIPA+SK+CCTS
Sbjct: 181 IVNKKSLAASENQANGNPASLS-GKKIVIPGPAQEIPAKSKVCCTS 225

The following BLAST results are available for this feature:

BLAST of Carg00708 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950001.1	1.1e-120	99.56	ras-related protein Rab11A [Cucurbita moschata] >XP_023543672.1 ras-related prot...	[more]
XP_022978553.1	1.4e-120	99.12	ras-related protein Rab11A [Cucurbita maxima]	[more]
XP_022962973.1	1.0e-118	97.36	ras-related protein Rab11A-like [Cucurbita moschata]	[more]
XP_023003097.1	2.9e-118	96.92	ras-related protein Rab11A-like [Cucurbita maxima]	[more]
XP_008440578.1	1.1e-117	96.48	PREDICTED: ras-related protein Rab11A [Cucumis melo] >XP_008440579.1 PREDICTED: ...	[more]

BLAST of Carg00708 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65270.1	1.2e-105	84.96	RAB GTPase homolog A4A	[more]
AT4G39990.1	6.3e-99	77.97	RAB GTPase homolog A4B	[more]
AT3G12160.1	8.0e-86	74.65	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.3e-85	72.90	RAB GTPase homolog A4C	[more]
AT1G09630.1	4.2e-71	60.37	RAB GTPase 11C	[more]

BLAST of Carg00708 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q40191\|RB11A_LOTJA	5.4e-108	87.67	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
sp\|Q9FJN8\|RAA4A_ARATH	2.1e-104	84.96	Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1	[more]
sp\|Q40522\|RB11D_TOBAC	5.2e-103	85.52	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]
sp\|Q40520\|RB11C_TOBAC	1.3e-101	84.62	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]
sp\|Q9SMQ6\|RAA4B_ARATH	1.1e-97	77.97	Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1	[more]

BLAST of Carg00708 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B108\|A0A1S3B108_CUCME	7.3e-118	96.48	ras-related protein Rab11A OS=Cucumis melo OX=3656 GN=LOC103484955 PE=4 SV=1	[more]
tr\|A0A0A0KIU6\|A0A0A0KIU6_CUCSA	6.2e-117	96.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499780 PE=4 SV=1	[more]
tr\|A0A2P5ABH7\|A0A2P5ABH7_PARAD	5.6e-110	89.87	Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|A0A2P5EZE2\|A0A2P5EZE2_9ROSA	7.3e-110	89.87	Small GTP-binding domain containing protein OS=Trema orientalis OX=63057 GN=TorR...	[more]
tr\|M5WJR3\|M5WJR3_PRUPE	1.3e-109	89.82	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G191600 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00708-RA	Carg00708-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 41..57 score: 35.04 coord: 59..81 score: 49.94 coord: 156..178 score: 43.17 coord: 18..39 score: 48.98 coord: 121..134 score: 51.71
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 20..177 e-value: 2.5E-10 score: 13.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 15..181 e-value: 2.1E-25 score: 100.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 23..216 e-value: 4.3E-8 score: 42.9
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 3..185 e-value: 0.0052 score: -0.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 18..181 e-value: 5.3E-107 score: 371.4
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 15..205 e-value: 2.6E-67 score: 227.9
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 8..225
None	No IPR available	PANTHER	PTHR24073:SF647	SUBFAMILY NOT NAMED	coord: 8..225
None	No IPR available	PROSITE	PS51419	RAB	coord: 13..224 score: 35.958
None	No IPR available	CDD	cd01868	Rab11_like	coord: 15..179 e-value: 9.21216E-121 score: 342.232
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 17..174 e-value: 1.0E-35 score: 120.9
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 19..179 e-value: 4.6E-62 score: 208.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 13..186

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00708	Cla014131	Watermelon (97103) v1	carwmB0407
Carg00708	Csa6G499780	Cucumber (Chinese Long) v2	carcuB0441
Carg00708	MELO3C007742	Melon (DHL92) v3.5.1	carmeB0414
Carg00708	ClCG01G018620	Watermelon (Charleston Gray)	carwcgB0397
Carg00708	CSPI06G30090	Wild cucumber (PI 183967)	carcpiB0446
Carg00708	Cucsa.104250	Cucumber (Gy14) v1	carcgyB0467
Carg00708	CmaCh07G005540	Cucurbita maxima (Rimu)	carcmaB0571
Carg00708	CmaCh03G008170	Cucurbita maxima (Rimu)	carcmaB0567
Carg00708	CmoCh07G005580	Cucurbita moschata (Rifu)	carcmoB0554
Carg00708	CmoCh03G008630	Cucurbita moschata (Rifu)	carcmoB0551
Carg00708	Lsi01G007880	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00708	Cp4.1LG10g01410	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00708	Cp4.1LG19g09890	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00708	CsGy6G029560	Cucumber (Gy14) v2	carcgybB0418
Carg00708	MELO3C007742.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00708	CsaV3_6G045290	Cucumber (Chinese Long) v3	carcucB0442
Carg00708	Cla97C01G017990	Watermelon (97103) v2	carwmbB0426
Carg00708	Bhi03G000889	Wax gourd	carwgoB0491

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00708	Carg15982	Silver-seed gourd	carcarB426

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00708	Cucumber (Gy14) v2	carcgybB0410
Carg00708	Cucumber (Gy14) v1	carcgyB0471
Carg00708	Cucumber (Gy14) v1	carcgyB0469
Carg00708	Cucurbita maxima (Rimu)	carcmaB0558
Carg00708	Cucurbita maxima (Rimu)	carcmaB0568
Carg00708	Cucurbita moschata (Rifu)	carcmoB0544
Carg00708	Cucurbita moschata (Rifu)	carcmoB0552
Carg00708	Cucurbita pepo (Zucchini)	carcpeB0555
Carg00708	Cucurbita pepo (Zucchini)	carcpeB0557
Carg00708	Cucurbita pepo (Zucchini)	carcpeB0562
Carg00708	Cucurbita pepo (Zucchini)	carcpeB0571
Carg00708	Wild cucumber (PI 183967)	carcpiB0437
Carg00708	Cucumber (Chinese Long) v2	carcuB0432
Carg00708	Cucumber (Chinese Long) v3	carcucB0434
Carg00708	Bottle gourd (USVL1VR-Ls)	carlsiB366
Carg00708	Bottle gourd (USVL1VR-Ls)	carlsiB370
Carg00708	Melon (DHL92) v3.5.1	carmeB0405
Carg00708	Melon (DHL92) v3.5.1	carmeB0407
Carg00708	Melon (DHL92) v3.6.1	carmedB0411
Carg00708	Melon (DHL92) v3.6.1	carmedB0413
Carg00708	Melon (DHL92) v3.6.1	carmedB0409
Carg00708	Watermelon (Charleston Gray)	carwcgB0402
Carg00708	Watermelon (97103) v1	carwmB0399
Carg00708	Watermelon (97103) v1	carwmB0408
Carg00708	Watermelon (97103) v2	carwmbB0431
Carg00708	Wax gourd	carwgoB0486
Carg00708	Wax gourd	carwgoB0495
Carg00708	Silver-seed gourd	carcarB064
Carg00708	Silver-seed gourd	carcarB431