Carg00708-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00708-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_014 : 1063396 .. 1065234 (+)
Sequence length	1274

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGCTGTGATTCATCGGTGGGTAGCATTTTTAAAGGGCTACTGAGATCTGCCACTCGCTTTCTCCTTTCTGGATCCATTTCGAGCTTCTTCTTCAGTTCTTAGGGAGAAGGGTGTAGTGAGCTCAGAGTTGGAAAGATGGCGAGCGGCGGTGGATATGGGGATGCCAATCAGAAGATAGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGGAAATCTCAGATTTTGGCGCGGTTTGCCCGAAACGAGTTCAGCTTGGACTCCAAGGCCACTATCGGCGTCGAGTTTCAGACTAGGACACTCGTTATTCAGCATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGGTACTTTTTCCTCCACTTCCTTTCTTTTCTCTTGTATTTCCCTCTTGTTTGGTTTTTAGGGTTTTAGTGGATCTTTAATGTGTTGGATTTGGGGCAGAGTATAGTGGATGATGATGCCCTTAGTACTATTGAATTTCATTTGTCTAGTAGTTGGTACTGGTATAAAGGCCAGATTATTCTCTCTTTATACTTGCATGGAATCAGATTACTTGTTGGGTGAAATGTTTATCATCCAGTATTGTCTGTTCCTACTTTCATGGAATGAGCTTGAGCAGCATCTTTCATGTAGTTTTCATAAACAATGGCCTTGTTGATATTCATTTGTTGTAAGATTGTCCTGTGGATTTGCGTTTTTTTTTTTTCTCCTCATGCTCCCATTCAGTCTTGTGATTCTTCCTTTAGCTTGTCTCGAAGCTTAACTATGTTGGATTTGATCCCTTAGAATGGAACTTTTATAGCTGGTTTTTGGAGTTTAAGTTAAACGATTATTATATACAGCTAAGACAATATTCCATTGAAGGCCATAGAAAAGCTGCATACCTTAACACATCGAGTATTTGAACAGATACAGAGCAGTTACAAGTGCATATTACAGAGGAGCTCTTGGGGCAATGCTTGTCTACGATATTACGAAACGCCAAACCTTTGATCACATACCTCGGTGGCTCGAGGAGTTGCGGAGCCATGCTGACAAGAACATCGTTATAATCTTAATAGGAAACAAAAGCGATCTGGAAGACCAGCGTGCTGTCTCCACTGAGGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCCGCACTGGAATCAACCAACGTGGAGAGTGCCTTCATGACTATCCTAACTGAGATCTTCAACATCATGAACAAAAAGAACTTGGCTGCTGGTGAAACTCAAGGCAATGGCAACTCTGCATCACTTGCCGGTGGTAAGAAGATCATAATCCCGGGCCCAGCGCAAGAAATCCCGGCTAGGAGCAAGATGTGCTGTACTTCCACATGATTTGTTCGGAGTTAGGCTCAAATGGGGCGATCTAGGTTGGTGCATTCCATGATTATAGCAATTTTTTTTTTTACTGGTGTGATGTTTTTCTGAGGTCATTTGTATATTTTGTTGTATGCTTTAGTCTGCTAGAGCTAGCAGCTGGAGTTTATATATACTTTGAAGGACGACAAATGAGGCTCTCGTTTACCTTTTTTTCAAAATAGAAGCTGTCTTTATTTACTGGAATATGAGAAAATCTGAAGTTAACATCATGTGATTGTGCGTACTATAAAAACTTACTATTTGTTGTCTTAAGAAGTTTGTTCCAAGGTTGGTTAATAATATGAATCTAGGAGTGCTTGGAACATTTGATTGGGCAGTGACTGCAACCCCCACCCCCTTGGATTATAGATCTTGTAATAATGCGTATTATACAAAAATAAATGAGAATCCGAAGTATGAGTTATCGTA

mRNA sequence

TCTGCTGTGATTCATCGGTGGGTAGCATTTTTAAAGGGCTACTGAGATCTGCCACTCGCTTTCTCCTTTCTGGATCCATTTCGAGCTTCTTCTTCAGTTCTTAGGGAGAAGGGTGTAGTGAGCTCAGAGTTGGAAAGATGGCGAGCGGCGGTGGATATGGGGATGCCAATCAGAAGATAGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGGAAATCTCAGATTTTGGCGCGGTTTGCCCGAAACGAGTTCAGCTTGGACTCCAAGGCCACTATCGGCGTCGAGTTTCAGACTAGGACACTCGTTATTCAGCATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGATACAGAGCAGTTACAAGTGCATATTACAGAGGAGCTCTTGGGGCAATGCTTGTCTACGATATTACGAAACGCCAAACCTTTGATCACATACCTCGGTGGCTCGAGGAGTTGCGGAGCCATGCTGACAAGAACATCGTTATAATCTTAATAGGAAACAAAAGCGATCTGGAAGACCAGCGTGCTGTCTCCACTGAGGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCCGCACTGGAATCAACCAACGTGGAGAGTGCCTTCATGACTATCCTAACTGAGATCTTCAACATCATGAACAAAAAGAACTTGGCTGCTGGTGAAACTCAAGGCAATGGCAACTCTGCATCACTTGCCGGTGGTAAGAAGATCATAATCCCGGGCCCAGCGCAAGAAATCCCGGCTAGGAGCAAGATGTGCTGTACTTCCACATGATTTGTTCGGAGTTAGGCTCAAATGGGGCGATCTAGGTTGGTGCATTCCATGATTATAGCAATTTTTTTTTTTACTGGTGTGATGTTTTTCTGAGGTCATTTGTATATTTTGTTGTATGCTTTAGTCTGCTAGAGCTAGCAGCTGGAGTTTATATATACTTTGAAGGACGACAAATGAGGCTCTCGTTTACCTTTTTTTCAAAATAGAAGCTGTCTTTATTTACTGGAATATGAGAAAATCTGAAGTTAACATCATGTGATTGTGCGTACTATAAAAACTTACTATTTGTTGTCTTAAGAAGTTTGTTCCAAGGTTGGTTAATAATATGAATCTAGGAGTGCTTGGAACATTTGATTGGGCAGTGACTGCAACCCCCACCCCCTTGGATTATAGATCTTGTAATAATGCGTATTATACAAAAATAAATGAGAATCCGAAGTATGAGTTATCGTA

Coding sequence (CDS)

ATGGCGAGCGGCGGTGGATATGGGGATGCCAATCAGAAGATAGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGGAAATCTCAGATTTTGGCGCGGTTTGCCCGAAACGAGTTCAGCTTGGACTCCAAGGCCACTATCGGCGTCGAGTTTCAGACTAGGACACTCGTTATTCAGCATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGATACAGAGCAGTTACAAGTGCATATTACAGAGGAGCTCTTGGGGCAATGCTTGTCTACGATATTACGAAACGCCAAACCTTTGATCACATACCTCGGTGGCTCGAGGAGTTGCGGAGCCATGCTGACAAGAACATCGTTATAATCTTAATAGGAAACAAAAGCGATCTGGAAGACCAGCGTGCTGTCTCCACTGAGGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCCGCACTGGAATCAACCAACGTGGAGAGTGCCTTCATGACTATCCTAACTGAGATCTTCAACATCATGAACAAAAAGAACTTGGCTGCTGGTGAAACTCAAGGCAATGGCAACTCTGCATCACTTGCCGGTGGTAAGAAGATCATAATCCCGGGCCCAGCGCAAGAAATCCCGGCTAGGAGCAAGATGTGCTGTACTTCCACATGA

Protein sequence

MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST

Homology

[Close]

BLAST of Carg00708-RA vs. NCBI nr
Match: XP_022950001.1 (ras-related protein Rab11A [Cucurbita moschata] >XP_023543672.1 ras-related protein Rab11A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 1.1e-120
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPA+SKMCCTST
Sbjct: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Carg00708-RA vs. NCBI nr
Match: XP_022978553.1 (ras-related protein Rab11A [Cucurbita maxima])

HSP 1 Score: 441.8 bits (1135), Expect = 1.4e-120
Identity = 225/227 (99.12%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMT+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPA+SKMCCTST
Sbjct: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Carg00708-RA vs. NCBI nr
Match: XP_022962973.1 (ras-related protein Rab11A-like [Cucurbita moschata])

HSP 1 Score: 435.6 bits (1119), Expect = 1.0e-118
Identity = 221/227 (97.36%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIPA+SKMCCTST
Sbjct: 181 IMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Carg00708-RA vs. NCBI nr
Match: XP_023003097.1 (ras-related protein Rab11A-like [Cucurbita maxima])

HSP 1 Score: 434.1 bits (1115), Expect = 2.9e-118
Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN
Sbjct: 121 KNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIP +SKMCCTST
Sbjct: 181 IMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPTKSKMCCTST 227

[Close]

BLAST of Carg00708-RA vs. NCBI nr
Match: XP_008440578.1 (PREDICTED: ras-related protein Rab11A [Cucumis melo] >XP_008440579.1 PREDICTED: ras-related protein Rab11A [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 219/227 (96.48%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMN+KNLAAGE QGNGNSASLAGGKKIIIPGPAQEIPA+SKMCC+ST
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCSST 227

[Close]

BLAST of Carg00708-RA vs. TAIR10
Match: AT5G65270.1 (RAB GTPase homolog A4A)

HSP 1 Score: 379.8 bits (974), Expect = 1.2e-105
Identity = 192/226 (84.96%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           M SGGGYGD +QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1   MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDIT+RQTFDHIPRWLEELR+HAD
Sbjct: 61  IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDL DQRA+ TEDAKEFAEKEGLFFLETSA  +TNVESAF T+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           I+NKK+LAA E Q NGN  SLAG K  I+PGP Q IP +S MCC S
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Carg00708-RA vs. TAIR10
Match: AT4G39990.1 (RAB GTPase homolog A4B)

HSP 1 Score: 357.5 bits (916), Expect = 6.3e-99
Identity = 177/227 (77.97%), Postives = 205/227 (90.31%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MA GGGYG A+ K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL 
Sbjct: 1   MAGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLS 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+ KS+KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKR+TF+HIPRWLEELR+HAD
Sbjct: 61  IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSAL +TNVE++F T++T+I+N
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
            +NKKNLA   ++G+ N+     GKKI+IPG  QEIPA++  CCTS+
Sbjct: 181 TVNKKNLA---SEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Carg00708-RA vs. TAIR10
Match: AT3G12160.1 (RAB GTPase homolog A4D)

HSP 1 Score: 313.9 bits (803), Expect = 8.0e-86
Identity = 162/217 (74.65%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 7   YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
           YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TLVI +K+V
Sbjct: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64

Query: 67  KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
           KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKRQ+FDH+ +WLEELR HADKNIVI+
Sbjct: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 124

Query: 127 LIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKN 186
           LIGNK DL   RAV TEDA+EFA++E LFF+ETSALE+TNVE+AF+TILTEI+ I++KK+
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184

Query: 187 LAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMC 224
           L A +   +GNS SL  G +IIIP   QE   R   C
Sbjct: 185 LTADDDDADGNS-SLLKGTRIIIPS-EQESGKRGGCC 219

[Close]

BLAST of Carg00708-RA vs. TAIR10
Match: AT5G47960.1 (RAB GTPase homolog A4C)

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-85
Identity = 156/214 (72.90%), Postives = 184/214 (85.98%), Query Frame = 0


Query: 11  NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
           NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEFS++SKATIGVEFQTRTL I  K++KAQI
Sbjct: 9   NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68

Query: 71  WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGN 130
           WDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQ+FDH+ RWLEELR HADKNIVI+LIGN
Sbjct: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128

Query: 131 KSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAG 190
           K+DL   RAV TEDAKEFA++E LFF+ETSAL+S NVE +F+T+LTEI+ I++KKNL A 
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188

Query: 191 ETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCC 225
           E   +G  +SL  G KI++ G  +E  ++ K CC
Sbjct: 189 EEGESGGDSSLLQGTKIVVAG--EETESKGKGCC 220

[Close]

BLAST of Carg00708-RA vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 265.0 bits (676), Expect = 4.2e-71
Identity = 131/217 (60.37%), Postives = 175/217 (80.65%), Query Frame = 0


Query: 11  NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
           +++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQI
Sbjct: 6   DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65

Query: 71  WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGN 130
           WDTAGQERYRA+TSAYYRGALGA+LVYD+TK  TF+++ RWL+ELR HAD NIVI+LIGN
Sbjct: 66  WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125

Query: 131 KSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAG 190
           K+DL+  RAV+TEDA+ +AEKEGL F+ETSALE+ NVE AF TIL+E++ I++KK++++ 
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD 185

Query: 191 ETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           +T  N N   +  G+ I +   ++      K CC+S+
Sbjct: 186 QTTANAN---IKEGQTIDVAATSES--NAKKPCCSSS 217

[Close]

BLAST of Carg00708-RA vs. Swiss-Prot
Match: sp|Q40191|RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 5.4e-108
Identity = 199/227 (87.67%), Postives = 215/227 (94.71%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDAN KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I HK+VKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELR+HAD
Sbjct: 61  IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNK DL +QR V TEDAKEFAEKEGLFFLETSALE+TNVESAF T+LTEI+N
Sbjct: 121 KNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           I+NKK+LAA E+QGNGNSASL+ G+KIIIPGPAQEIPA+  MCC ++
Sbjct: 181 IVNKKSLAADESQGNGNSASLS-GQKIIIPGPAQEIPAKRNMCCQAS 226

[Close]

BLAST of Carg00708-RA vs. Swiss-Prot
Match: sp|Q9FJN8|RAA4A_ARATH (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.1e-104
Identity = 192/226 (84.96%), Postives = 205/226 (90.71%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           M SGGGYGD +QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLV
Sbjct: 1   MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDIT+RQTFDHIPRWLEELR+HAD
Sbjct: 61  IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDL DQRA+ TEDAKEFAEKEGLFFLETSA  +TNVESAF T+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           I+NKK+LAA E Q NGN  SLAG K  I+PGP Q IP +S MCC S
Sbjct: 181 IVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Carg00708-RA vs. Swiss-Prot
Match: sp|Q40522|RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.2e-103
Identity = 189/221 (85.52%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 6   GYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
           GYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL IQHKS
Sbjct: 4   GYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKS 63

Query: 66  VKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVI 125
           VKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELR+HAD+NIVI
Sbjct: 64  VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVI 123

Query: 126 ILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKK 185
           +LIGNK+DLEDQRAV TEDAKEFA+KEGLFFLETSA+E+TN+E AF+T+LTEIFNI+NKK
Sbjct: 124 MLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKK 183

Query: 186 NLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           NLAA + Q NGN ASL  GKKI++PGP Q IP + K CC+S
Sbjct: 184 NLAADDNQSNGNPASLT-GKKILVPGPGQVIPEK-KACCSS 222

[Close]

BLAST of Carg00708-RA vs. Swiss-Prot
Match: sp|Q40520|RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 187/221 (84.62%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 6   GYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
           GYGDA+QKIDYVFKVVLIGDSAVGK+QILARFARNEFSLDSKATIGVEFQTRTLVIQHKS
Sbjct: 4   GYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 63

Query: 66  VKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVI 125
           VKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELR+HAD+NIVI
Sbjct: 64  VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVI 123

Query: 126 ILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKK 185
           +L GNK+DLEDQRAV TEDAKEFA+KEGLFFLETSA+E+T +E AF+T+LTEIFNI+NKK
Sbjct: 124 MLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKK 183

Query: 186 NLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           NLAA E Q N N ASL  GKKI++PGP Q IP + K CC+S
Sbjct: 184 NLAADENQSNSNPASLT-GKKILVPGPGQVIPGK-KACCSS 222

[Close]

BLAST of Carg00708-RA vs. Swiss-Prot
Match: sp|Q9SMQ6|RAA4B_ARATH (Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 177/227 (77.97%), Postives = 205/227 (90.31%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MA GGGYG A+ K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL 
Sbjct: 1   MAGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLS 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+ KS+KAQIWDTAGQERYRAVTSAYYRGA+GAMLVYD+TKR+TF+HIPRWLEELR+HAD
Sbjct: 61  IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSAL +TNVE++F T++T+I+N
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
            +NKKNLA   ++G+ N+     GKKI+IPG  QEIPA++  CCTS+
Sbjct: 181 TVNKKNLA---SEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Carg00708-RA vs. TrEMBL
Match: tr|A0A1S3B108|A0A1S3B108_CUCME (ras-related protein Rab11A OS=Cucumis melo OX=3656 GN=LOC103484955 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 7.3e-118
Identity = 219/227 (96.48%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           IMN+KNLAAGE QGNGNSASLAGGKKIIIPGPAQEIPA+SKMCC+ST
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCSST 227

[Close]

BLAST of Carg00708-RA vs. TrEMBL
Match: tr|A0A0A0KIU6|A0A0A0KIU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499780 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 6.2e-117
Identity = 217/226 (96.02%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLEDQRAV TEDAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF+
Sbjct: 121 KNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFS 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           IMN+KNLAAGE QGNGNSASLAGGKKIIIPGPAQEIPA+SKMCC++
Sbjct: 181 IMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCST 226

[Close]

BLAST of Carg00708-RA vs. TrEMBL
Match: tr|A0A2P5ABH7|A0A2P5ABH7_PARAD (Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_348930 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.6e-110
Identity = 204/227 (89.87%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNK+DLE+QRAV TEDAKEFA+KEGLFFLETSALESTNVE+AF+T+LTEIFN
Sbjct: 121 KNIVIILIGNKTDLENQRAVPTEDAKEFAQKEGLFFLETSALESTNVENAFLTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           I+NKKNLAAGE QGNGN A+L  GKKII+PGPAQ IP +++MCCTS+
Sbjct: 181 ILNKKNLAAGENQGNGNPANLT-GKKIIVPGPAQVIPEKNRMCCTSS 226

[Close]

BLAST of Carg00708-RA vs. TrEMBL
Match: tr|A0A2P5EZE2|A0A2P5EZE2_9ROSA (Small GTP-binding domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_133070 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 7.3e-110
Identity = 204/227 (89.87%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV
Sbjct: 1   MASGGGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQTFDHIPRWLEELRSHAD
Sbjct: 61  IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNK+DLE+QRAV TEDAKEFA+KEGLFFLETSALESTNVE+AF+T+LTEIFN
Sbjct: 121 KNIVIILIGNKTDLENQRAVPTEDAKEFAQKEGLFFLETSALESTNVENAFLTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTST 228
           I+NKKNLAAGE QGNGN A+L  GKKII+PGPAQ IP +++MCCTS+
Sbjct: 181 IVNKKNLAAGENQGNGNPANLT-GKKIIVPGPAQVIPEKNRMCCTSS 226

[Close]

BLAST of Carg00708-RA vs. TrEMBL
Match: tr|M5WJR3|M5WJR3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G191600 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.3e-109
Identity = 203/226 (89.82%), Postives = 219/226 (96.90%), Query Frame = 0


Query: 1   MASGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLV 60
           MASGGGYGD+NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL+
Sbjct: 1   MASGGGYGDSNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLI 60

Query: 61  IQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHAD 120
           I+HKSVKAQIWDTAGQERYRAVTSAYYRGA+GAMLVYDITKRQ+FDHIPRWLEELRSHAD
Sbjct: 61  IEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRSHAD 120

Query: 121 KNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFN 180
           KNIVIILIGNKSDLE+QR + TEDAKEFA+KEGLFFLETSALESTNVESAF+T+LTEIFN
Sbjct: 121 KNIVIILIGNKSDLENQRVIPTEDAKEFAQKEGLFFLETSALESTNVESAFLTVLTEIFN 180

Query: 181 IMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPARSKMCCTS 227
           I+NKK+LAA E Q NGN ASL+ GKKI+IPGPAQEIPA+SK+CCTS
Sbjct: 181 IVNKKSLAASENQANGNPASLS-GKKIVIPGPAQEIPAKSKVCCTS 225

The following BLAST results are available for this feature:

BLAST of Carg00708-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950001.1	1.1e-120	99.56	ras-related protein Rab11A [Cucurbita moschata] >XP_023543672.1 ras-related prot...	[more]
XP_022978553.1	1.4e-120	99.12	ras-related protein Rab11A [Cucurbita maxima]	[more]
XP_022962973.1	1.0e-118	97.36	ras-related protein Rab11A-like [Cucurbita moschata]	[more]
XP_023003097.1	2.9e-118	96.92	ras-related protein Rab11A-like [Cucurbita maxima]	[more]
XP_008440578.1	1.1e-117	96.48	PREDICTED: ras-related protein Rab11A [Cucumis melo] >XP_008440579.1 PREDICTED: ...	[more]

BLAST of Carg00708-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65270.1	1.2e-105	84.96	RAB GTPase homolog A4A	[more]
AT4G39990.1	6.3e-99	77.97	RAB GTPase homolog A4B	[more]
AT3G12160.1	8.0e-86	74.65	RAB GTPase homolog A4D	[more]
AT5G47960.1	2.3e-85	72.90	RAB GTPase homolog A4C	[more]
AT1G09630.1	4.2e-71	60.37	RAB GTPase 11C	[more]

BLAST of Carg00708-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q40191\|RB11A_LOTJA	5.4e-108	87.67	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
sp\|Q9FJN8\|RAA4A_ARATH	2.1e-104	84.96	Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1	[more]
sp\|Q40522\|RB11D_TOBAC	5.2e-103	85.52	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]
sp\|Q40520\|RB11C_TOBAC	1.3e-101	84.62	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]
sp\|Q9SMQ6\|RAA4B_ARATH	1.1e-97	77.97	Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1	[more]

BLAST of Carg00708-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B108\|A0A1S3B108_CUCME	7.3e-118	96.48	ras-related protein Rab11A OS=Cucumis melo OX=3656 GN=LOC103484955 PE=4 SV=1	[more]
tr\|A0A0A0KIU6\|A0A0A0KIU6_CUCSA	6.2e-117	96.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499780 PE=4 SV=1	[more]
tr\|A0A2P5ABH7\|A0A2P5ABH7_PARAD	5.6e-110	89.87	Small GTP-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
tr\|A0A2P5EZE2\|A0A2P5EZE2_9ROSA	7.3e-110	89.87	Small GTP-binding domain containing protein OS=Trema orientalis OX=63057 GN=TorR...	[more]
tr\|M5WJR3\|M5WJR3_PRUPE	1.3e-109	89.82	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G191600 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg00708	Carg00708	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg00708-RA	Carg00708-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg00708-RA.exon.1	Carg00708-RA.exon.1	exon
Carg00708-RA.exon.2	Carg00708-RA.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg00708-RA.five_prime_UTR.1	Carg00708-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg00708-RA.CDS.1	Carg00708-RA.CDS.1	CDS
Carg00708-RA.CDS.2	Carg00708-RA.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg00708-RA.three_prime_UTR.1	Carg00708-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 41..57 score: 35.04 coord: 59..81 score: 49.94 coord: 156..178 score: 43.17 coord: 18..39 score: 48.98 coord: 121..134 score: 51.71
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 20..177 e-value: 2.5E-10 score: 13.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 15..181 e-value: 2.1E-25 score: 100.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 23..216 e-value: 4.3E-8 score: 42.9
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 3..185 e-value: 0.0052 score: -0.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 18..181 e-value: 5.3E-107 score: 371.4
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 15..205 e-value: 2.6E-67 score: 227.9
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 8..225
None	No IPR available	PANTHER	PTHR24073:SF647	SUBFAMILY NOT NAMED	coord: 8..225
None	No IPR available	PROSITE	PS51419	RAB	coord: 13..224 score: 35.958
None	No IPR available	CDD	cd01868	Rab11_like	coord: 15..179 e-value: 9.21216E-121 score: 342.232
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 17..174 e-value: 1.0E-35 score: 120.9
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 19..179 e-value: 4.6E-62 score: 208.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 13..186