Carg18705 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCTGTTCGTAAATATCAGAAGTTCATGGGCATTGGAGGAAAGGCAAAAGTTGAAGGGGTACGTGGCATGTTGTGATTGGGTGAAGGCTTAGAACTGAGAAATCGGCGCGTTTTATTCAGTGATTCGTCCACATACGCAGTCGTCTTCTTCCTCCCAGTTCTTGCTGCTGTATTCCTTTCTCCCCGCTCTCTGCTTCGTCCCAAATCTCTCTCTCTAACTATTTGAAAATTTTCAGTCTTTGAATTTCTCAAGCTATGTATGAACATTTCATTTACTGTTGTCTTTGTTCTTTGCTGTCGAGACTTTGTAGCTAGCTTCTTTTTGCTTTTTTTTTTCTTCCATTACTAGACGGCCCACTTCTCTCATTCTTTATCTCGACTTTTCGTTTGTTTTTTTGGCGATCCCGATCACTTCTTTTGGAGCTTTGATTCAAATTCTCTGCTGCTTAGCTGAACGAGCTCGGGTACGGCCTGATGGATTTGGACTGTTTTTTCTTTTTTCTTTTTGATTTTGTTACTTACTGCTTGGATTTTGGTATTTGGTAGTGAATTTTGGATTGGTGGATATGATTTCGAGGTCGATTTTTGGATGAAATGTGGAATTGGAATTTATCGTACTTATTGTTCTTGCTTCGTTGCTTGCTAATCAAGCTTCAATCTCTTTATTAATCTACTAGTTGGTGGGGTTATGTTCCTTTTCTTCCTGTTTTTGATTTCTTGATATTAAAATTGCAGCGAGTTTATTGATAATTGCTTCCTCGTTCACTCTTTCAATTGGTTCTCTTTTCTGAATCCACTGTTGCTCCTCTCGCGAGCTAAACTTTGAAGTGGGAATCTTCTAAATTCATGTCGAGTTTTTGTTTTTAGGCTTTGAGTTTAAGAATTTTGTCTGGAAACTTTGCAGGTAGACAGGAGTACTGGTTAACCATGGCTCAACGAAGGGCTTCGGATCAACCACCGGGTAAGAAAATCATGCGAGCCCAAACACTAGGGAATTTAGCTGAGTCGATCATGGACAGTGAGGTGGTTCCTTCTTCACTCGATGAGATCGCGCCAATTCTTCGTGTTGCTAATGAAGTCGAGGCAATCAATCCGAGGGTTGCTTATCTATGTAAGTTGCAGCAACTTTGCTTGGAAATTTGGAACTCATTTAAAGTACTACTTTTTTCTTTGATTCAACTGCTGAGGAATTATATTCTTGAAGAATTACTTCGAGAAGAAAATTGATGTTAACTTCAGCGAATCATTGCGTTTTCTGGGTCAGGTCGATTTTACGCATTTGAAAAGGCTCACAAATTAGATCCCACTTCAAGCGGACGTGGTGTTCGGCAATTTAAGACGGCACTTCTTCAGCGTCTAGAGCGGGTATTTCAGTTCCTCTGTCTGTTCTATATCTCATGAATATCTATTTGTAGCATAGCGGACTACCCAAAATCATCTGGGAGTAATGTATTGGTTGGGTTTGTTAGGAACCATAAATCTCACAAATCTCCACAATTGTATGTATTGTCAAGTATAAGCTCTCATGGTTTTCTTTCGGTTTTCCGAAAAGGCGTCTTACTAATGGAGATATATTCCTTACTCATAAACCCATAATCGTTCTCTTAATTAGTCATGTAGGACTCCCTCCCAACCATCCTCAACAATCTTCCCCTCGGACAAAGTATACCATAGAGCCTCTCTTGAGGCATATGGAGTCCTCGAATAACCTCCCATTAATTGTGGTTCGACTCCTTCTCTGGAGCCCTCGAACAAAATACACCCTTTATTTGACACTTGAGTCATTTTTTACTACACCTTCGAGGCTCACAACTTTTTTATTCGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGACATGGTTTTGATACCCTGCTATGAATCACAAACTTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTACTTTTGGTTTCCCTAAAAGGCTTCGTACTAATGGAGATGTATTCCTTACTTATAAATTCATGATCATTCTCTTAATTAGCTAATTAGCTAATGTGGAACTCCCTCCCAACCATCCTCAACCGGGTTTGCTTTGATGGTAGCTATATATTCATACCAAAGAAAAAGAAAAGTAATGAACTGTAAAAATGCACCTTGCGGTGAATATATCCATTTAGACTAACTTCTTTTCATCTATGTTGCTGAATGGAATTGCTGCTTTTCAGGAAAATGAAACAACATTAGCTGAAAGGCAAAAGAGTGATGCTCGTGAAATGCAGAGCTTCTATCGCCATTACTACACAAAATATATTCAAGCCTTGAACGAGCCTGGCAAAGCTGATCGGTAG ATGGGTCTGTTCGTAAATATCAGAAGTTCATGGGCATTGGAGGAAAGGCAAAAGTTGAAGGGACGGCCCACTTCTCTCATTCTTTATCTCGACTTTTCGTTTGTTTTTTTGGCGATCCCGATCACTTCTTTTGGAGCTTTGATTCAAATTCTCTGCTGCTTAGCTGAACGAGCTCGGGTACGGCCTGATGGATTTGGACTTGAATTTTGGATTGGTGGATATGATTTCGAGGTCGATTTTTGGATGAAATGTGGAATTGGAATTTATCGTAGACAGGAGTACTGGTTAACCATGGCTCAACGAAGGGCTTCGGATCAACCACCGGGTAAGAAAATCATGCGAGCCCAAACACTAGGGAATTTAGCTGAGTCGATCATGGACAGTGAGGTGGTTCCTTCTTCACTCGATGAGATCGCGCCAATTCTTCGTGTTGCTAATGAAGTCGAGGCAATCAATCCGAGGGTTGCTTATCTATGTCGATTTTACGCATTTGAAAAGGCTCACAAATTAGATCCCACTTCAAGCGGACGTGGTGTTCGGCAATTTAAGACGGCACTTCTTCAGCGTCTAGAGCGGGAAAATGAAACAACATTAGCTGAAAGGCAAAAGAGTGATGCTCGTGAAATGCAGAGCTTCTATCGCCATTACTACACAAAATATATTCAAGCCTTGAACGAGCCTGGCAAAGCTGATCGGTAG ATGGGTCTGTTCGTAAATATCAGAAGTTCATGGGCATTGGAGGAAAGGCAAAAGTTGAAGGGACGGCCCACTTCTCTCATTCTTTATCTCGACTTTTCGTTTGTTTTTTTGGCGATCCCGATCACTTCTTTTGGAGCTTTGATTCAAATTCTCTGCTGCTTAGCTGAACGAGCTCGGGTACGGCCTGATGGATTTGGACTTGAATTTTGGATTGGTGGATATGATTTCGAGGTCGATTTTTGGATGAAATGTGGAATTGGAATTTATCGTAGACAGGAGTACTGGTTAACCATGGCTCAACGAAGGGCTTCGGATCAACCACCGGGTAAGAAAATCATGCGAGCCCAAACACTAGGGAATTTAGCTGAGTCGATCATGGACAGTGAGGTGGTTCCTTCTTCACTCGATGAGATCGCGCCAATTCTTCGTGTTGCTAATGAAGTCGAGGCAATCAATCCGAGGGTTGCTTATCTATGTCGATTTTACGCATTTGAAAAGGCTCACAAATTAGATCCCACTTCAAGCGGACGTGGTGTTCGGCAATTTAAGACGGCACTTCTTCAGCGTCTAGAGCGGGAAAATGAAACAACATTAGCTGAAAGGCAAAAGAGTGATGCTCGTGAAATGCAGAGCTTCTATCGCCATTACTACACAAAATATATTCAAGCCTTGAACGAGCCTGGCAAAGCTGATCGGTAG MGLFVNIRSSWALEERQKLKGRPTSLILYLDFSFVFLAIPITSFGALIQILCCLAERARVRPDGFGLEFWIGGYDFEVDFWMKCGIGIYRRQEYWLTMAQRRASDQPPGKKIMRAQTLGNLAESIMDSEVVPSSLDEIAPILRVANEVEAINPRVAYLCRFYAFEKAHKLDPTSSGRGVRQFKTALLQRLERENETTLAERQKSDAREMQSFYRHYYTKYIQALNEPGKADR
BLAST of Carg18705 vs. NCBI nr
Match: XP_022953403.1 (callose synthase 1 [Cucurbita moschata] >XP_022953404.1 callose synthase 1 [Cucurbita moschata] >XP_022953405.1 callose synthase 1 [Cucurbita moschata]) HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of Carg18705 vs. NCBI nr
Match: XP_022991842.1 (callose synthase 1 [Cucurbita maxima] >XP_022991843.1 callose synthase 1 [Cucurbita maxima] >XP_022991845.1 callose synthase 1 [Cucurbita maxima]) HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of Carg18705 vs. NCBI nr
Match: XP_023547393.1 (callose synthase 1 [Cucurbita pepo subsp. pepo] >XP_023547394.1 callose synthase 1 [Cucurbita pepo subsp. pepo] >XP_023547395.1 callose synthase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of Carg18705 vs. NCBI nr
Match: GAV77615.1 (Glucan_synthase domain-containing protein/DUF605 domain-containing protein/FKS1_dom1 domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 221.5 bits (563), Expect = 3.0e-54 Identity = 113/135 (83.70%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Carg18705 vs. NCBI nr
Match: XP_008461236.1 (PREDICTED: callose synthase 1 [Cucumis melo] >XP_008461237.1 PREDICTED: callose synthase 1 [Cucumis melo] >XP_008461239.1 PREDICTED: callose synthase 1 [Cucumis melo]) HSP 1 Score: 216.1 bits (549), Expect = 1.3e-52 Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0
BLAST of Carg18705 vs. TAIR10
Match: AT2G31960.1 (glucan synthase-like 3) HSP 1 Score: 212.2 bits (539), Expect = 3.3e-55 Identity = 112/137 (81.75%), Postives = 121/137 (88.32%), Query Frame = 0
BLAST of Carg18705 vs. TAIR10
Match: AT1G05570.1 (callose synthase 1) HSP 1 Score: 211.8 bits (538), Expect = 4.4e-55 Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0
BLAST of Carg18705 vs. TAIR10
Match: AT5G13000.1 (glucan synthase-like 12) HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47 Identity = 102/129 (79.07%), Postives = 111/129 (86.05%), Query Frame = 0
BLAST of Carg18705 vs. TAIR10
Match: AT2G13680.1 (callose synthase 5) HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34 Identity = 77/139 (55.40%), Postives = 100/139 (71.94%), Query Frame = 0
BLAST of Carg18705 vs. TAIR10
Match: AT3G59100.1 (glucan synthase-like 11) HSP 1 Score: 137.5 bits (345), Expect = 1.0e-32 Identity = 72/122 (59.02%), Postives = 89/122 (72.95%), Query Frame = 0
BLAST of Carg18705 vs. Swiss-Prot
Match: sp|Q9SL03|CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3) HSP 1 Score: 212.2 bits (539), Expect = 6.0e-54 Identity = 112/137 (81.75%), Postives = 121/137 (88.32%), Query Frame = 0
BLAST of Carg18705 vs. Swiss-Prot
Match: sp|Q9AUE0|CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 7.9e-54 Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0
BLAST of Carg18705 vs. Swiss-Prot
Match: sp|Q9LXT9|CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3) HSP 1 Score: 186.8 bits (473), Expect = 2.7e-46 Identity = 102/129 (79.07%), Postives = 111/129 (86.05%), Query Frame = 0
BLAST of Carg18705 vs. Swiss-Prot
Match: sp|Q3B724|CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.6e-33 Identity = 77/139 (55.40%), Postives = 100/139 (71.94%), Query Frame = 0
BLAST of Carg18705 vs. Swiss-Prot
Match: sp|Q9LYS6|CALS6_ARATH (Putative callose synthase 6 OS=Arabidopsis thaliana OX=3702 GN=CALS6 PE=3 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31 Identity = 72/122 (59.02%), Postives = 89/122 (72.95%), Query Frame = 0
BLAST of Carg18705 vs. TrEMBL
Match: tr|A0A1Q3CBK0|A0A1Q3CBK0_CEPFO (Glucan_synthase domain-containing protein/DUF605 domain-containing protein/FKS1_dom1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21086 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54 Identity = 113/135 (83.70%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Carg18705 vs. TrEMBL
Match: tr|A0A1S3CEN5|A0A1S3CEN5_CUCME (callose synthase 1 OS=Cucumis melo OX=3656 GN=LOC103499883 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 8.4e-53 Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0
BLAST of Carg18705 vs. TrEMBL
Match: tr|V4M682|V4M682_EUTSA (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016125mg PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.5e-52 Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 0
BLAST of Carg18705 vs. TrEMBL
Match: tr|D7LEB8|D7LEB8_ARALL (Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_482124 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.5e-52 Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 0
BLAST of Carg18705 vs. TrEMBL
Match: tr|A0A1P8AXZ6|A0A1P8AXZ6_ARATH (Glucan synthase-like 3 OS=Arabidopsis thaliana OX=3702 GN=GSL03 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51 Identity = 112/137 (81.75%), Postives = 121/137 (88.32%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |