Carg17999 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17999
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Callose synthase
Location	Cucurbita_argyrosperma_scaffold_171 : 270039 .. 274541 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGATTTTTCGTCTCCGCGTACGCGTCAATTAAAGACCTAAACCCCGTCACCGGTCATACCCGGTGATTTACTTTTTCCACTTCCCAGTTCCCACCGCACTGCGTTCTATTCTTTCTCCTTTCCTTTTGCCTTTCTTCCCGTCTTTCCCGCTCCCATCTCTGAATCTACACAGCTTCAGCAACCCGAACAGCCCTTCCAAGCTCAATTCCATTTCCGGGATTTTACTCCTCCTGGTCTTTCTATCTGTAGCGTTTTGCTCCATTTAATCAGGTACGTTGAATCCCTTTCATCGTTCTTGTGTATGTTCCGTTTCTTTTTTGCTGGTTCGTGGATGGTTTGCGGAGAATGTTATGTAGAGGTTGAAAAATGGAGGAAATGTAGCTTAGGTTTTTGTTATTTATGGGTTTTAAGTGCTGGTGAGTTGGGCTTTTGCTGGTTGGCATCAGTATAGCATGGTGTTAGTTTTTGGATTGATGGATGCTTCTGTAATTACTGGAATTTGCTTTGTGTTTGTTTTTCTTTTGGGTTTGGGTTTGGGTTTGAACTTTGGTGGTAATCTTCTGACGTTTTGTTTGTTGCTTGAGACACCACACTGTGTCGAGGAAGTGTGAATTGCAGTAATATTTGTGCTATTGTGTGCTTAAAAACTGTACGGTGGAAGGTATGTGTATCTTATTTAGTGAGATGGTACCAAAGTGAGCATATTTCAACGGTAATTGGCATGTACGACTAAGATGTCAATTGTTCGAAGTCCCAACCTTCAAATGTTGTTGAACTCACAAAATTTACTGAGATGCTAATTTTCTTTGAAGTTTTGGGGAGGTTTTCAAGATTTCTAGTGTTAGTCTGGCTTCAAGCGAAGTTTTGAGGAAGGATGAATAAGGTGCTCTGCTTTGACAAAAAGAGTATTCCTGGCAAATGACATTATTCAATTCAGAATGTGGTTAAGGAGAAATAGAAAAATCTTTGAATGGGTAGCGACATTTGGAGATGTTGGGAGTGTGGTGAACTTTACTGCAAGCTTAATTTTTATGCAAAAGGAAAATGGAAAAAACTATCGTGATAGCTCAGAATACTTCTACTGGAGCATTTGAACCAATGCCAAATTTCCCCATAGGACGAAGTTTGTCCTTGAGCTTGGTAGCTAGAGTGGACTTAATATGGTGCATAAAAATTGTTATATTTGTTGTGATTTTGTAAGATTGAAGTTATTGGGACATTATTTAATCATTGGGGCTTACTCTTATAAGATGCAGTCAAGAATTGCCTTTTGATTTCTCGCTTCTGTTTGTCTTAAGCAATTGTACCATGCATTGGTGAACCATGATTAAATTCTTGACTGCATCTTTGCCTCTTTTCACAATTAGTCTTGATCTTAAGTGTTTGTCTACTTTATGCTTTTATTTGATTCATTAAGGGGTTCCATCTGGTTGATCATTACTATTTTTTGTTTTAAATAATTTCTCTCTTATGCTAAAATAGAGAATGACACAAGTTGAGGAGTTATGGGAACGCTTAGTTCGAGCTGCCTTAAGAAGAGATAGAATTGGCATTGATGCATATGGACGCCCTGAAAGTGGCATTGCTGGAAATGTACCATCTTCACTTGCAAACAATAGGGATATTGATGAAATCTTGAGAGCTGCAGATGAAATCCAAGATGAAGATCCCAATGTTGCGAGAATATGTATGTTCCTTTTGTTTTAAATTTTTATTTATAAAATATTTGTTTTTGAATTTTTTTTTTAGTATTGGCAAACATAAATTCTGCATGTCATAAATCCTACCTGAATAAAAATTCATCCAGTTTAATCATTGAAGGAGAAGAAATTAGGATTGCAGTTTTCAAAATATCATTGAACTTTTAGGATTTTGTGAACATTTTTATGGCCACTTGGTGCTTGCTGGCTAATGTTTTTTTTTTCTTTTTCTTTTTTTTTTTGAAGTGCAACTTTGTGCGTATTTCAACCAATTTGAGTTTCTTTTTGTAATGGGGATTGCTCATTCCTTCCTCTTGTACAAGCCTGTTTTTGAATGAGCTTTGTTTGTCTCTTATTAAAAAAAAAAATATGAGACAGAAACTTTTCCATGTGAAGGTCTTTAACTCTGAACCTTATTCCTCAAATTGGGAGCTTGGGTGGGGAGGAGGACTAAAAATCCAGTGGGGATGATGATGGGAAATGCATCCCCGCCCCTGTTTAGCCTTGTTGCTGTGCTTCCATGTGAGTGTCTTTAACTCTGAACCCAATTCCTCATATCGGGGAATGGGAAGGGGAGGAGGATTAAAAAACTAGTGGGGATGATGATGGAAAATGCATCCCCACCCCTGTTTAGCCTTGTTGCTGTGCTTCTTTGTTAGCTCTCAGTCTGAGCTTGTAAATTGAGGAACTCTAATATCAAAGAACACTAAAGAGGGGATCCAACGTCCTATTTAGGCTGCATGTGTGGCTTGAAGGTGATTTTCTGAAAGTTATATTTTAAAGGCCTTTCAAATTGGCTATGTATTGAGGGATTACTGTTAAGGAGGTTAGGAGTGAGCCCATATTTTTTTTGGTCCATCACTTTCAAAATGTTTACTGGTTCATGACTTTCACATAAGGTTTTCAGACCAGGATATGACAGTAAAATTTTATGTTCTTTCAACTTAACAGCTTCACCTTCTCTCTTGGGAGTGATACTGGAACCTTTCTGAAGTCTTGAAATATTTGACCTCTCTTATGTTAAGTCCTTGTTTTTTTCTTGAAATATTTGACCACTATTATTTTAAGTCCTTGTTTTCTTCCCTTCTCAGGCTGTCAAGCTATTAAGTCAAACTTTCAGTAAAACGATGTGGAAAGTGCCCATCTTGAAGGAATGAAAATTGTTCTTATGCTTTTGAGCTCTATATTTTGGAGCAATCAATAAAATGTAATCAAGAAAGTTGTTTTTTTTCCTTTTCAAATTAACTGCTGTTGCTTATTTTAACTTTTTGAGGAGAACCAAAATCATTTTTCTTTTTTTGTTTTTGGATGAAAAAGCACACTGTCATAGAGTAAATGAATGGGTATATACCGGGCATACAAAAGAGAAAAAAAAAAAAAGAAAAGAAACTAGCCCAAAAACAAGTGGAGACAAACCTAAAAACTAAAAGAAAGGTCTCCAACTATTAAGAATAAGAAGCAAAGGATAGTTATAAAGAGATTTTGACAACTGGAGAGAGCTATTGAATATAGCAGGGAGAGTTCTGGAGAGATGTATTGAATCTAGCAGTGGACCAAACCTCTCCCAAGATCTCACAAACCGCTCCCAAGTTCTCTCAAACTGGCAAAGACTTTTGGATCAAATTATTGGGTTTGGATATGTCCATCAATCATAATCCTTCGCTCAGGAATGTAACAGTAGAGTCTTCATCGACACTTTCAGAAAAGTTAATCCATGTAGGGTTTTTTTTTTAATTGCAATTATTCCTTAGTTCTTTAGGTATCAATTGGACATTTCTTTTCTGTAGTTCTGTATTTTTATGTCTGTCAGTAAGTTATTTTTCTCACAAGAAGTAGATATTTGAAATAAAATTATGATGATAATGATGAATTTCAACACTTCCAGTGAGTGATTATGTACAACTGAACTGAAATTCTCTCATAGGAATGAATCCAAGCGGCATTGTAAAATAATATTTCATGGAAAAGTTATAAAGACTTACTCCTTTTATTCCCTTTGATATAAGATTGTTATTGATTTTATACATTTGATAGATCATTCCAAATCACTTGGAACTTGTTTTTGTATTTTTGCCTGTAGTATGTGAGCATGCATATTCGCTTGCGCAAAACCTGGATCCGAATAGTGAAGGGAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTAATTAAGGTACATTCTTGATCTTTTTTTTTCCTTTTAATGTATATGAAAATGGAACGATGATTAAGTGATTTGAATAGAGGGAGAAAAGGTCAGGAATGCATCTCATGGTTTAAACTTGCTTCTCTCGTTTGTTTGTTTATTTATTTTTTTAGTATTTTTTTATGGGACACATTCTAGCATTTCATCGAGTGTACATGCTAGAATATCATTGAAGAGACAACATTGTAGCATTTCCTCTTGCCACTTTGTTCAAGTTTTTTTTGCTTCTGTATTTTATTTTTTATTTTTTTTTTGAGTATTGGGTTGATCTGTGGGGTTAGATTTCTTGTCACCATCCAAGCATTTTTTTCCCAAAAAAAAATATGCTCTTACTTTATATTGTTTGAGAATTTGAGCCATCTACTTCTTTGCACTTTTGACTTTTATATCTAATTCTTGATTGTTTGAGAGATATATTTCAGCAAAAGCTAGCCAAGAGGGAGGGTGGAATAATAGATAGAAGGCAGGACGTTACTCGGTTACAAGAGTTCTACAGACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGAGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAACCTTGGAGAGTAA

mRNA sequence

TAAGATTTTTCGTCTCCGCGTACGCGTCAATTAAAGACCTAAACCCCGTCACCGGTCATACCCGGTGATTTACTTTTTCCACTTCCCAGTTCCCACCGCACTGCGTTCTATTCTTTCTCCTTTCCTTTTGCCTTTCTTCCCGTCTTTCCCGCTCCCATCTCTGAATCTACACAGCTTCAGCAACCCGAACAGCCCTTCCAAGCTCAATTCCATTTCCGGGATTTTACTCCTCCTGGTCTTTCTATCTGTAGCGTTTTGCTCCATTTAATCAGAGAATGACACAAGTTGAGGAGTTATGGGAACGCTTAGTTCGAGCTGCCTTAAGAAGAGATAGAATTGGCATTGATGCATATGGACGCCCTGAAAGTGGCATTGCTGGAAATGTACCATCTTCACTTGCAAACAATAGGGATATTGATGAAATCTTGAGAGCTGCAGATGAAATCCAAGATGAAGATCCCAATGTTGCGAGAATATTATGTGAGCATGCATATTCGCTTGCGCAAAACCTGGATCCGAATAGTGAAGGGAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTAATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAATAATAGATAGAAGGCAGGACGTTACTCGGTTACAAGAGTTCTACAGACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGAGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAACCTTGGAGAGTAA

Coding sequence (CDS)

ATGACACAAGTTGAGGAGTTATGGGAACGCTTAGTTCGAGCTGCCTTAAGAAGAGATAGAATTGGCATTGATGCATATGGACGCCCTGAAAGTGGCATTGCTGGAAATGTACCATCTTCACTTGCAAACAATAGGGATATTGATGAAATCTTGAGAGCTGCAGATGAAATCCAAGATGAAGATCCCAATGTTGCGAGAATATTATGTGAGCATGCATATTCGCTTGCGCAAAACCTGGATCCGAATAGTGAAGGGAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTAATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAATAATAGATAGAAGGCAGGACGTTACTCGGTTACAAGAGTTCTACAGACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGAGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAACCTTGGAGAGTAA

Protein sequence

MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE

Homology

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BLAST of Carg17999 vs. NCBI nr
Match: XP_022929574.1 (LOW QUALITY PROTEIN: callose synthase 9-like [Cucurbita moschata])

HSP 1 Score: 304.3 bits (778), Expect = 2.4e-79
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MTQVEELWERLVRAALRRDRIG DAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 1   MTQVEELWERLVRAALRRDRIGFDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL
Sbjct: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE
Sbjct: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 155

[Close]

BLAST of Carg17999 vs. NCBI nr
Match: XP_022966547.1 (LOW QUALITY PROTEIN: callose synthase 9-like [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 3.1e-79
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG IDRRQDVTRL
Sbjct: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGTIDRRQDVTRL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE
Sbjct: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 155

[Close]

BLAST of Carg17999 vs. NCBI nr
Match: XP_023531967.1 (callose synthase 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG IDR QDVTRL
Sbjct: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGTIDRSQDVTRL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE
Sbjct: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 155

[Close]

BLAST of Carg17999 vs. NCBI nr
Match: XP_022157350.1 (callose synthase 9 [Momordica charantia])

HSP 1 Score: 295.0 bits (754), Expect = 1.4e-76
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MT+VEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 1   MTRVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNV+RILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG IDR QD TRL
Sbjct: 61  DPNVSRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGTIDRSQDTTRL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFY+LYRE+NNVDKLREDEMKLRESGAFSGNLGE
Sbjct: 121 QEFYKLYRERNNVDKLREDEMKLRESGAFSGNLGE 155

[Close]

BLAST of Carg17999 vs. NCBI nr
Match: XP_008451107.1 (PREDICTED: callose synthase 9 [Cucumis melo] >XP_016900973.1 PREDICTED: callose synthase 9 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 2.3e-74
Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MT+VEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 1   MTRVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPN+ARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG IDR QD+ RL
Sbjct: 61  DPNIARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGTIDRSQDIARL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
            EFY+LYREKNNVDKLRE+E  LRESGAFSGNLGE
Sbjct: 121 LEFYKLYREKNNVDKLREEETNLRESGAFSGNLGE 155

[Close]

BLAST of Carg17999 vs. TAIR10
Match: AT3G07160.1 (glucan synthase-like 10)

HSP 1 Score: 230.3 bits (586), Expect = 7.9e-61
Identity = 120/153 (78.43%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           M++ E  WERLV AALRRDR G  A G  +S I G VPSSL+NNRDID ILRAADEIQDE
Sbjct: 1   MSRAESSWERLVNAALRRDRTGGVAGGN-QSSIVGYVPSSLSNNRDIDAILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPN+ARILCEH YSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKRE G IDR QD+ RL
Sbjct: 61  DPNIARILCEHGYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDILRL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNL 154
           QEFYRLYREKNNVD L+E+E +LRESGAF+  L
Sbjct: 121 QEFYRLYREKNNVDTLKEEEKQLRESGAFTDEL 152

[Close]

BLAST of Carg17999 vs. TAIR10
Match: AT2G36850.1 (glucan synthase-like 8)

HSP 1 Score: 188.3 bits (477), Expect = 3.4e-48
Identity = 99/158 (62.66%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYG--RPESGIAGNVPSSLANNRDIDEILRAADEIQ 60
           M +V   W+RLVRA LRR+++     G  R  SG+AG VP SL    +ID IL+AADEIQ
Sbjct: 1   MARVYSNWDRLVRATLRREQLRNTGQGHERVSSGLAGAVPPSLGRATNIDAILQAADEIQ 60

Query: 61  DEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVT 120
            EDP+VARILCE AYS+AQNLDPNS+GRGVLQFKTGLMSVIKQKLAKR+G  IDR +D+ 
Sbjct: 61  SEDPSVARILCEQAYSMAQNLDPNSDGRGVLQFKTGLMSVIKQKLAKRDGASIDRDRDIE 120

Query: 121 RLQEFYRLYREKNNVDKLREDEMKLRESG-AFSGNLGE 156
           RL EFY+LY+ ++ VD ++++E K RESG  FS N+GE
Sbjct: 121 RLWEFYKLYKRRHRVDDIQKEEQKWRESGTTFSSNVGE 158

[Close]

BLAST of Carg17999 vs. TAIR10
Match: AT5G13000.1 (glucan synthase-like 12)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 37  VPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLM 96
           VPSSL    +I  ILR A+E++  +P VA +   +A+  A  LDP S GRGV QFKT L+
Sbjct: 38  VPSSLV---EIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 97

Query: 97  SVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREK 131
             ++++      G + ++ D   +Q FY+ Y +K
Sbjct: 98  QRLEREHDPTLMGRV-KKSDAREMQSFYQHYYKK 127

[Close]

BLAST of Carg17999 vs. TAIR10
Match: AT1G05570.1 (callose synthase 1)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 37  VPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLM 96
           VPSSL    +I  ILR A+E++  +P VA +   +A+  A  LDP S GRGV QFKT L+
Sbjct: 35  VPSSLV---EIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94

Query: 97  SVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREK 131
             ++++      G   ++ D   +Q FY+ Y +K
Sbjct: 95  QRLERENETTLAG--RQKSDAREMQSFYQHYYKK 123

[Close]

BLAST of Carg17999 vs. TAIR10
Match: AT2G31960.1 (glucan synthase-like 3)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 37  VPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLM 96
           VPSSL    +I  ILR A+E++  +P VA +   +A+  A  LDP S GRGV QFKT L+
Sbjct: 35  VPSSLV---EIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94

Query: 97  SVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREK 131
             ++++      G   ++ D   +Q FY+ Y +K
Sbjct: 95  QRLERENETTLAG--RQKSDAREMQSFYQHYYKK 123

[Close]

BLAST of Carg17999 vs. Swiss-Prot
Match: sp|Q9SFU6|CALS9_ARATH (Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-59
Identity = 120/153 (78.43%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           M++ E  WERLV AALRRDR G  A G  +S I G VPSSL+NNRDID ILRAADEIQDE
Sbjct: 1   MSRAESSWERLVNAALRRDRTGGVAGGN-QSSIVGYVPSSLSNNRDIDAILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPN+ARILCEH YSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKRE G IDR QD+ RL
Sbjct: 61  DPNIARILCEHGYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDILRL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNL 154
           QEFYRLYREKNNVD L+E+E +LRESGAF+  L
Sbjct: 121 QEFYRLYREKNNVDTLKEEEKQLRESGAFTDEL 152

[Close]

BLAST of Carg17999 vs. Swiss-Prot
Match: sp|Q9SJM0|CALSA_ARATH (Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5)

HSP 1 Score: 188.3 bits (477), Expect = 6.2e-47
Identity = 99/158 (62.66%), Postives = 122/158 (77.22%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYG--RPESGIAGNVPSSLANNRDIDEILRAADEIQ 60
           M +V   W+RLVRA LRR+++     G  R  SG+AG VP SL    +ID IL+AADEIQ
Sbjct: 1   MARVYSNWDRLVRATLRREQLRNTGQGHERVSSGLAGAVPPSLGRATNIDAILQAADEIQ 60

Query: 61  DEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVT 120
            EDP+VARILCE AYS+AQNLDPNS+GRGVLQFKTGLMSVIKQKLAKR+G  IDR +D+ 
Sbjct: 61  SEDPSVARILCEQAYSMAQNLDPNSDGRGVLQFKTGLMSVIKQKLAKRDGASIDRDRDIE 120

Query: 121 RLQEFYRLYREKNNVDKLREDEMKLRESG-AFSGNLGE 156
           RL EFY+LY+ ++ VD ++++E K RESG  FS N+GE
Sbjct: 121 RLWEFYKLYKRRHRVDDIQKEEQKWRESGTTFSSNVGE 158

[Close]

BLAST of Carg17999 vs. Swiss-Prot
Match: sp|Q9LXT9|CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3)

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-09
Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 37  VPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLM 96
           VPSSL    +I  ILR A+E++  +P VA +   +A+  A  LDP S GRGV QFKT L+
Sbjct: 38  VPSSLV---EIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 97

Query: 97  SVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREK 131
             ++++      G + ++ D   +Q FY+ Y +K
Sbjct: 98  QRLEREHDPTLMGRV-KKSDAREMQSFYQHYYKK 127

[Close]

BLAST of Carg17999 vs. Swiss-Prot
Match: sp|Q9AUE0|CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 37  VPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLM 96
           VPSSL    +I  ILR A+E++  +P VA +   +A+  A  LDP S GRGV QFKT L+
Sbjct: 35  VPSSLV---EIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94

Query: 97  SVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREK 131
             ++++      G   ++ D   +Q FY+ Y +K
Sbjct: 95  QRLERENETTLAG--RQKSDAREMQSFYQHYYKK 123

[Close]

BLAST of Carg17999 vs. Swiss-Prot
Match: sp|Q9SL03|CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 37  VPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLM 96
           VPSSL    +I  ILR A+E++  +P VA +   +A+  A  LDP S GRGV QFKT L+
Sbjct: 35  VPSSLV---EIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94

Query: 97  SVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREK 131
             ++++      G   ++ D   +Q FY+ Y +K
Sbjct: 95  QRLERENETTLAG--RQKSDAREMQSFYQHYYKK 123

[Close]

BLAST of Carg17999 vs. TrEMBL
Match: tr|A0A1S4DYC5|A0A1S4DYC5_CUCME (callose synthase 9 OS=Cucumis melo OX=3656 GN=LOC103492488 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MT+VEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 1   MTRVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPN+ARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG IDR QD+ RL
Sbjct: 61  DPNIARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGTIDRSQDIARL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
            EFY+LYREKNNVDKLRE+E  LRESGAFSGNLGE
Sbjct: 121 LEFYKLYREKNNVDKLREEETNLRESGAFSGNLGE 155

[Close]

BLAST of Carg17999 vs. TrEMBL
Match: tr|A0A0A0LX29|A0A0A0LX29_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605100 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 143/155 (92.26%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           MT+VEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE
Sbjct: 35  MTRVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 94

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPN++RILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAK+EGG IDR QD+ RL
Sbjct: 95  DPNISRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKKEGGTIDRSQDIARL 154

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
            EFY+LYREKNNVDKLRE+EM LRESGAFSGNLGE
Sbjct: 155 LEFYKLYREKNNVDKLREEEMNLRESGAFSGNLGE 189

[Close]

BLAST of Carg17999 vs. TrEMBL
Match: tr|A0A2P2MBM0|A0A2P2MBM0_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.9e-70
Identity = 136/155 (87.74%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           M++ E+LWERLVRAALRR+RIG DA GRP SGIAGNVPSSLANNRDID ILRAADEIQDE
Sbjct: 1   MSRAEDLWERLVRAALRRERIGTDALGRPVSGIAGNVPSSLANNRDIDAILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNV+RILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG+IDR QD+ RL
Sbjct: 61  DPNVSRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGVIDRSQDIARL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFY+LYREKNNVDKLRE+EMKLRES   SGNLGE
Sbjct: 121 QEFYKLYREKNNVDKLREEEMKLRESSVVSGNLGE 155

[Close]

BLAST of Carg17999 vs. TrEMBL
Match: tr|A0A2P2MBQ3|A0A2P2MBQ3_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.9e-70
Identity = 136/155 (87.74%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           M++ E+LWERLVRAALRR+RIG DA GRP SGIAGNVPSSLANNRDID ILRAADEIQDE
Sbjct: 1   MSRAEDLWERLVRAALRRERIGTDALGRPVSGIAGNVPSSLANNRDIDAILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNV+RILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG+IDR QD+ RL
Sbjct: 61  DPNVSRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGVIDRSQDIARL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFY+LYREKNNVDKLRE+EMKLRES   SGNLGE
Sbjct: 121 QEFYKLYREKNNVDKLREEEMKLRESSVVSGNLGE 155

[Close]

BLAST of Carg17999 vs. TrEMBL
Match: tr|A0A2P2MBM2|A0A2P2MBM2_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.9e-70
Identity = 136/155 (87.74%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MTQVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDE 60
           M++ E+LWERLVRAALRR+RIG DA GRP SGIAGNVPSSLANNRDID ILRAADEIQDE
Sbjct: 1   MSRAEDLWERLVRAALRRERIGTDALGRPVSGIAGNVPSSLANNRDIDAILRAADEIQDE 60

Query: 61  DPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRL 120
           DPNV+RILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGG+IDR QD+ RL
Sbjct: 61  DPNVSRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGVIDRSQDIARL 120

Query: 121 QEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 156
           QEFY+LYREKNNVDKLRE+EMKLRES   SGNLGE
Sbjct: 121 QEFYKLYREKNNVDKLREEEMKLRESSVVSGNLGE 155

The following BLAST results are available for this feature:

BLAST of Carg17999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929574.1	2.4e-79	99.35	LOW QUALITY PROTEIN: callose synthase 9-like [Cucurbita moschata]	[more]
XP_022966547.1	3.1e-79	99.35	LOW QUALITY PROTEIN: callose synthase 9-like [Cucurbita maxima]	[more]
XP_023531967.1	1.5e-78	98.71	callose synthase 9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022157350.1	1.4e-76	95.48	callose synthase 9 [Momordica charantia]	[more]
XP_008451107.1	2.3e-74	92.90	PREDICTED: callose synthase 9 [Cucumis melo] >XP_016900973.1 PREDICTED: callose ...	[more]

BLAST of Carg17999 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07160.1	7.9e-61	78.43	glucan synthase-like 10	[more]
AT2G36850.1	3.4e-48	62.66	glucan synthase-like 8	[more]
AT5G13000.1	4.9e-10	38.30	glucan synthase-like 12	[more]
AT1G05570.1	1.1e-09	38.30	callose synthase 1	[more]
AT2G31960.1	1.1e-09	38.30	glucan synthase-like 3	[more]

BLAST of Carg17999 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SFU6\|CALS9_ARATH	1.4e-59	78.43	Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2	[more]
sp\|Q9SJM0\|CALSA_ARATH	6.2e-47	62.66	Callose synthase 10 OS=Arabidopsis thaliana OX=3702 GN=CALS10 PE=2 SV=5	[more]
sp\|Q9LXT9\|CALS3_ARATH	8.8e-09	38.30	Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3	[more]
sp\|Q9AUE0\|CALS1_ARATH	2.0e-08	38.30	Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2	[more]
sp\|Q9SL03\|CALS2_ARATH	2.0e-08	38.30	Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3	[more]

BLAST of Carg17999 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DYC5\|A0A1S4DYC5_CUCME	1.5e-74	92.90	callose synthase 9 OS=Cucumis melo OX=3656 GN=LOC103492488 PE=4 SV=1	[more]
tr\|A0A0A0LX29\|A0A0A0LX29_CUCSA	1.5e-74	92.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605100 PE=4 SV=1	[more]
tr\|A0A2P2MBM0\|A0A2P2MBM0_RHIMU	3.9e-70	87.74	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2P2MBQ3\|A0A2P2MBQ3_RHIMU	3.9e-70	87.74	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2P2MBM2\|A0A2P2MBM2_RHIMU	3.9e-70	87.74	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17999-RA	Carg17999-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12741:SF43	CALLOSE SYNTHASE 10	coord: 1..153
None	No IPR available	PANTHER	PTHR12741	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	coord: 1..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17999	Cla004766	Watermelon (97103) v1	carwmB0163
Carg17999	CmoCh11G008270	Cucurbita moschata (Rifu)	carcmoB0241

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17999	Carg18705	Silver-seed gourd	carcarB207

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17999	Wax gourd	carwgoB0221
Carg17999	Silver-seed gourd	carcarB208
Carg17999	Silver-seed gourd	carcarB209
Carg17999	Cucumber (Gy14) v2	carcgybB0186
Carg17999	Cucumber (Gy14) v1	carcgyB0212
Carg17999	Cucurbita maxima (Rimu)	carcmaB0230
Carg17999	Cucurbita maxima (Rimu)	carcmaB0231
Carg17999	Cucurbita moschata (Rifu)	carcmoB0240
Carg17999	Cucurbita pepo (Zucchini)	carcpeB0247
Carg17999	Cucurbita pepo (Zucchini)	carcpeB0248
Carg17999	Wild cucumber (PI 183967)	carcpiB0199
Carg17999	Cucumber (Chinese Long) v2	carcuB0192
Carg17999	Cucumber (Chinese Long) v3	carcucB0199
Carg17999	Bottle gourd (USVL1VR-Ls)	carlsiB155
Carg17999	Melon (DHL92) v3.5.1	carmeB0178
Carg17999	Melon (DHL92) v3.6.1	carmedB0182
Carg17999	Watermelon (Charleston Gray)	carwcgB0165
Carg17999	Watermelon (97103) v2	carwmbB0178