Carg18682-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCATTGTTACGCGTAGGTTAAGCTCCAAATTCCTCAGACCAATTCCTTCTTCCACTTTTCTCATCTCCCAAGGCCCTCGCGAACATTTCACCCGAATCCCTTCTACACATTCCGATCCCTGGTTTCCGCAATCGCCCCGACGAACTTTTGCAATTCCTACAGTTGACCTCGTTTCCCCGACGGACACACCTTTTGCAGATCTTGAGGCTCTCAGATCTTACAGGAGATCCGCGAATTTCAATCGAAATTCCATTAGCAGTAACCCTAATTCCGATCATCGGATTCGGGGACCAATCACATCCAGTCCTGGTTTGATTCCGAGATTGAGAAACCCTAGCTTCTTCATCTCAGATTTGGATCAGAAATATGGATTTTCTTCAACTCCTGAGAACGAGAACTTGGAGAAACCCGCTGATTTCAAGCATCAAGACATCGAAGGACCGACCGTCGAGAGAGACCTCTCGGCGTTGGCCGGCGAAACCAGAGAGGTGGTTGAAGCGATGATGAAGAACGTGTACAGCTTAAGCAAAGCTATGGCGATTCTCGGTCTTGTTCAGTTGGGAATTGGGGCTTGGATTTCGTACGCAACTCGCGCTTCACCATTCACAGAAGTTTCCATCCAGAGCTTCGTGTCCTTCGGGTTTCCTTTCTCGCTGGCCTTCATTCTCCGCCAATCTCTGAAGCCGATGATGTTCTTCAAGAAAATGGAAGAACAAGGTAGGTTGCAGATTCTGACTCTGACACTTCAAATTGCTAAAAATTTGAATGCTCTGTTCGTTAGAGTGCGAATTGTTTCCTTCTTGTGTGTAACTGGATTGTCTGTTGGTGTTCTGTTTGCTTTGCTTTCGAGATGAATCCATTTTCTTCCCCATTCTGCAAAAACTTCGAGCCACACAAAATTGGGCTTCCACAAACCTTCCCATAAGAGTGTTCATCAATGAAATTCGTTTCAGAACTATGAATGTTAGTTGTTTTGGATTCTTTTTTACACTTTTTAAGTTTGATTGATTTCTCCCAGAACATCAAATTATGGCATAACAAAATTTGGTTTGTTCTTGGACTTCAGGTTTTTGGTTCATTTGGATATTTTTAAAATGTCTACGTATGATATTGGTATGATATTGTCCACTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGACCTCGTACCAATGGAGATAGTATTCCTAATTTATAAACCCATGACCTTCCACTAAATTAACCAACGTCGGACACTCCCAATCATCCTTAACAAAAAGATACTTGTGCCACAGTACTCCTATTTTAAAGGGACAAGACCCTCTTTTTGGAGGTCATTAGTATAACGCCTCTTCGAAGCTTTATGGGAGAAAGTACAGCTAACGGCTAGTAGAGAGGTCTACCCTGATAGTCAAGATTCTGTTTGTTCGTCTCTTGCTCTCTATTGTAGCAAATCGATATTAGCTTATGTTCTAATTAGATGTTCCAAATGTCTTCTTGAACGAGAACTACCGAAAGAAGTTTACAAGAGTCCTCCCCTAGTTGTGTAAGGAGAGGAGAGCAATATAGGTCAACTGTAGTGGAAGCCAAACGACGGAGCGAAAATCTGTGAATCAAAGAACACTCTTAGACTCTTTGAGGGCTAGGGGGAAGGGTTTCACGAGGAAGCATGTAAGAATTAAAAGACGGTTCTATCCTTCTTCAAATTCTAATACAATTTATTAAATCAAATGGAAATCTCGATAATGACATGATATTATCTTATATTGGATTTTGAATAAAAGGGGAAAAAATAAATCAAATTTAGGTATTAAAAGAATAAATAAATACAAAAGTCATCAGTTTCCACGTGTTCATCAAAGAAGGAGAAATCACATTATAAAGGGTAGAATCGGAACACGTAAGAAGCCTCCACTCTGTACACACCCAAAAACGGGATTCATAGGAGCACCAGCTTTTCCAACTCGATCCCCTACAACCAATTTCTCGTAAGCTCGCCACTATCTTCATTATCATTGGTCCAACTCCCCCTTCTCTGACTTTTACCCCTTTTCTCCAATCACAACGTTCCACGTATACCCCAAAACCAACCATTTGGAATTCGTAACGTTTTTGTTTATTTTATTTTATTTTATTTTTGGCCCACTTCGGACCCCCCACGATGGCCCTTTAAATTGGGAATTCCATTGTGAAAACTTGGCTTTTCTCTCCACCTTCCAAACCCCATCGCCTTTCTGATTGCTGTAGGGTTAGTTTTCCCAATTTCCTCCTCTTTTTCTTTTCTTCTCTTCAACGTAATTCGTTCATCGCCGCATACGGCTATTTTGTTTCTTTGATTTATATATGATTTTTGTTCCTGTTGATTTTCAGTGAAAGGAGGGGAGCGGAGAATCGTCATCTAGCTGGGAATTTTATGGTGTTTTCTATTGTCACGAATACGCAGCGGTCGAATACAGCTTTTCCTCCTACACCTAACAACCATCAGGTCAGTATTAAGAATTTAAGGATTTCTTCCATTTCTCGATATTGATTTTTTCGGTATCTGTTGGTTTCTATGCAAATTGGTTGGTTCTGAGGAAGCGATTATGCTTTCTTCTGTTTTGCTGAAATTTATTGTAATACTTGACGGATATTTTTAATCGAACTTGTGGATGGAAGTAATCTTATGATGTGTTTTTGGTATATGCTTGCGTTTTCTTAGGTTTTTGGACATTACTAACAGCAGGTATTTGCATGTCTTTTCTTCTTTTGTGTGTGTGTGTTGTTGAGTGGCCTCCTATTACTTTTAATGTTTTCTATTCTGTTCCAAATCGATCTCTCTTTGCTTGGAGTTTTGTTTTAGAACATAATTGAGGTATTTGCATATTACCATTCTTTGAAGAAGAATTTGAGTGGCAATAGGATGAGACTAGCTAGGGTTCTAATTTTGTAGAATGGTTTGGCTTAGAGCTTGCGAATGAAGGATGAAACTATGAACAAGGCCTCCACTGAGCACTGAAAACTGATAGCCACTTCAAACCTTTCAAAGGAAACCATGAACTGACCACTGACCGATAAAAAGACATTCCAAAACCAATCACAAGGCAACCTGTTGCAACATTATTAGAACGTTTCTCATGAACAGATGGATATATTTCATTAAAATCCCAATCTTCAAGCCATTTCTGCACACGTCTCCTTGAAAAACACTTTAGCTTTGCATGAACTTCTAACCATCACCTGCGAAGATACACAAATTCTTTCATGTATGCTCATTCCAATTACCTATTTTGACTGGAAAATAATGCTTCCCATGCACAACCACCCTAATAAGAAGATCCTTCTGCTGACCGACCAAAATATGATTGGAAATTAATGTTTCCCGTGCCAAGCACCAGAATTAATTCAATTTGCATACCAACC ATGGCCGCCATTGTTACGCGTAGGTTAAGCTCCAAATTCCTCAGACCAATTCCTTCTTCCACTTTTCTCATCTCCCAAGGCCCTCGCGAACATTTCACCCGAATCCCTTCTACACATTCCGATCCCTGGTTTCCGCAATCGCCCCGACGAACTTTTGCAATTCCTACAGTTGACCTCGTTTCCCCGACGGACACACCTTTTGCAGATCTTGAGGCTCTCAGATCTTACAGGAGATCCGCGAATTTCAATCGAAATTCCATTAGCAGTAACCCTAATTCCGATCATCGGATTCGGGGACCAATCACATCCAGTCCTGGTTTGATTCCGAGATTGAGAAACCCTAGCTTCTTCATCTCAGATTTGGATCAGAAATATGGATTTTCTTCAACTCCTGAGAACGAGAACTTGGAGAAACCCGCTGATTTCAAGCATCAAGACATCGAAGGACCGACCGTCGAGAGAGACCTCTCGGCGTTGGCCGGCGAAACCAGAGAGGTGGTTGAAGCGATGATGAAGAACGTGTACAGCTTAAGCAAAGCTATGGCGATTCTCGGTCTTGTTCAGTTGGGAATTGGGGCTTGGATTTCGTACGCAACTCGCGCTTCACCATTCACAGAAGTTTCCATCCAGAGCTTCGTGTCCTTCGGGTTTCCTTTCTCGCTGGCCTTCATTCTCCGCCAATCTCTGAAGCCGATGATGTTCTTCAAGAAAATGGAAGAACAAGGTAGGTTGCAGATTCTGACTCTGACACTTCAAATTGCTAAAAATTTGAATGCTCTGTTCGTTAGAGTGCGAATTGTTTCCTTCTTTGAAAGGAGGGGAGCGGAGAATCGTCATCTAGCTGGGAATTTTATGGTGTTTTCTATTGTCACGAATACGCAGCGGTCGAATACAGCTTTTCCTCCTACACCTAACAACCATCAGGTCAGTATTAAGAATTTAAGGATTTCTTCCATTTCTCGATATTGATTTTTTCGGTATCTGTTGGTTTCTATGCAAATTGGTTGGTTCTGAGGAAGCGATTATGCTTTCTTCTGTTTTGCTGAAATTTATTGTAATACTTGACGGATATTTTTAATCGAACTTGTGGATGGAAGTAATCTTATGATGTGTTTTTGGTATATGCTTGCGTTTTCTTAGGTTTTTGGACATTACTAACAGCAGGTATTTGCATGTCTTTTCTTCTTTTGTGTGTGTGTGTTGTTGAGTGGCCTCCTATTACTTTTAATGTTTTCTATTCTGTTCCAAATCGATCTCTCTTTGCTTGGAGTTTTGTTTTAGAACATAATTGAGGTATTTGCATATTACCATTCTTTGAAGAAGAATTTGAGTGGCAATAGGATGAGACTAGCTAGGGTTCTAATTTTGTAGAATGGTTTGGCTTAGAGCTTGCGAATGAAGGATGAAACTATGAACAAGGCCTCCACTGAGCACTGAAAACTGATAGCCACTTCAAACCTTTCAAAGGAAACCATGAACTGACCACTGACCGATAAAAAGACATTCCAAAACCAATCACAAGGCAACCTGTTGCAACATTATTAGAACGTTTCTCATGAACAGATGGATATATTTCATTAAAATCCCAATCTTCAAGCCATTTCTGCACACGTCTCCTTGAAAAACACTTTAGCTTTGCATGAACTTCTAACCATCACCTGCGAAGATACACAAATTCTTTCATGTATGCTCATTCCAATTACCTATTTTGACTGGAAAATAATGCTTCCCATGCACAACCACCCTAATAAGAAGATCCTTCTGCTGACCGACCAAAATATGATTGGAAATTAATGTTTCCCGTGCCAAGCACCAGAATTAATTCAATTTGCATACCAACC ATGGCCGCCATTGTTACGCGTAGGTTAAGCTCCAAATTCCTCAGACCAATTCCTTCTTCCACTTTTCTCATCTCCCAAGGCCCTCGCGAACATTTCACCCGAATCCCTTCTACACATTCCGATCCCTGGTTTCCGCAATCGCCCCGACGAACTTTTGCAATTCCTACAGTTGACCTCGTTTCCCCGACGGACACACCTTTTGCAGATCTTGAGGCTCTCAGATCTTACAGGAGATCCGCGAATTTCAATCGAAATTCCATTAGCAGTAACCCTAATTCCGATCATCGGATTCGGGGACCAATCACATCCAGTCCTGGTTTGATTCCGAGATTGAGAAACCCTAGCTTCTTCATCTCAGATTTGGATCAGAAATATGGATTTTCTTCAACTCCTGAGAACGAGAACTTGGAGAAACCCGCTGATTTCAAGCATCAAGACATCGAAGGACCGACCGTCGAGAGAGACCTCTCGGCGTTGGCCGGCGAAACCAGAGAGGTGGTTGAAGCGATGATGAAGAACGTGTACAGCTTAAGCAAAGCTATGGCGATTCTCGGTCTTGTTCAGTTGGGAATTGGGGCTTGGATTTCGTACGCAACTCGCGCTTCACCATTCACAGAAGTTTCCATCCAGAGCTTCGTGTCCTTCGGGTTTCCTTTCTCGCTGGCCTTCATTCTCCGCCAATCTCTGAAGCCGATGATGTTCTTCAAGAAAATGGAAGAACAAGGTAGGTTGCAGATTCTGACTCTGACACTTCAAATTGCTAAAAATTTGAATGCTCTGTTCGTTAGAGTGCGAATTGTTTCCTTCTTTGAAAGGAGGGGAGCGGAGAATCGTCATCTAGCTGGGAATTTTATGGTGTTTTCTATTGTCACGAATACGCAGCGGTCGAATACAGCTTTTCCTCCTACACCTAACAACCATCAGGTCAGTATTAAGAATTTAAGGATTTCTTCCATTTCTCGATATTGA MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLVSPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSFFISDLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLTLQIAKNLNALFVRVRIVSFFERRGAENRHLAGNFMVFSIVTNTQRSNTAFPPTPNNHQVSIKNLRISSISRY
BLAST of Carg18682-RA vs. NCBI nr
Match: XP_023549384.1 (uncharacterized protein LOC111807746 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133 Identity = 255/269 (94.80%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of Carg18682-RA vs. NCBI nr
Match: XP_022954073.1 (uncharacterized protein LOC111456447 [Cucurbita moschata]) HSP 1 Score: 481.5 bits (1238), Expect = 2.3e-132 Identity = 256/269 (95.17%), Postives = 259/269 (96.28%), Query Frame = 0
BLAST of Carg18682-RA vs. NCBI nr
Match: XP_022991920.1 (uncharacterized protein LOC111488415 [Cucurbita maxima]) HSP 1 Score: 474.2 bits (1219), Expect = 3.6e-130 Identity = 253/270 (93.70%), Postives = 257/270 (95.19%), Query Frame = 0
BLAST of Carg18682-RA vs. NCBI nr
Match: XP_022145979.1 (uncharacterized protein LOC111015297 [Momordica charantia]) HSP 1 Score: 310.1 bits (793), Expect = 9.0e-81 Identity = 189/285 (66.32%), Postives = 205/285 (71.93%), Query Frame = 0
BLAST of Carg18682-RA vs. NCBI nr
Match: XP_008461275.1 (PREDICTED: uncharacterized protein LOC103499911 [Cucumis melo]) HSP 1 Score: 308.5 bits (789), Expect = 2.6e-80 Identity = 180/269 (66.91%), Postives = 201/269 (74.72%), Query Frame = 0
BLAST of Carg18682-RA vs. TAIR10
Match: AT3G12650.1 (unknown protein) HSP 1 Score: 179.5 bits (454), Expect = 3.3e-45 Identity = 107/193 (55.44%), Postives = 132/193 (68.39%), Query Frame = 0
BLAST of Carg18682-RA vs. TrEMBL
Match: tr|A0A1S3CFJ7|A0A1S3CFJ7_CUCME (uncharacterized protein LOC103499911 OS=Cucumis melo OX=3656 GN=LOC103499911 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80 Identity = 180/269 (66.91%), Postives = 201/269 (74.72%), Query Frame = 0
BLAST of Carg18682-RA vs. TrEMBL
Match: tr|A0A0A0K8D3|A0A0A0K8D3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428810 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79 Identity = 181/270 (67.04%), Postives = 194/270 (71.85%), Query Frame = 0
BLAST of Carg18682-RA vs. TrEMBL
Match: tr|B9HNM6|B9HNM6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G063700v3 PE=4 SV=2) HSP 1 Score: 221.9 bits (564), Expect = 2.1e-54 Identity = 152/312 (48.72%), Postives = 193/312 (61.86%), Query Frame = 0
BLAST of Carg18682-RA vs. TrEMBL
Match: tr|A0A2P5E742|A0A2P5E742_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_228720 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52 Identity = 141/282 (50.00%), Postives = 180/282 (63.83%), Query Frame = 0
BLAST of Carg18682-RA vs. TrEMBL
Match: tr|A0A2N9IKT8|A0A2N9IKT8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52797 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 9.9e-52 Identity = 149/308 (48.38%), Postives = 184/308 (59.74%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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