Carg18682 (gene) Silver-seed gourd

Overview
NameCarg18682
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLIM domain-containing serine/threonine-protein kinase
LocationCucurbita_argyrosperma_scaffold_139 : 136620 .. 140007 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCATTGTTACGCGTAGGTTAAGCTCCAAATTCCTCAGACCAATTCCTTCTTCCACTTTTCTCATCTCCCAAGGCCCTCGCGAACATTTCACCCGAATCCCTTCTACACATTCCGATCCCTGGTTTCCGCAATCGCCCCGACGAACTTTTGCAATTCCTACAGTTGACCTCGTTTCCCCGACGGACACACCTTTTGCAGATCTTGAGGCTCTCAGATCTTACAGGAGATCCGCGAATTTCAATCGAAATTCCATTAGCAGTAACCCTAATTCCGATCATCGGATTCGGGGACCAATCACATCCAGTCCTGGTTTGATTCCGAGATTGAGAAACCCTAGCTTCTTCATCTCAGATTTGGATCAGAAATATGGATTTTCTTCAACTCCTGAGAACGAGAACTTGGAGAAACCCGCTGATTTCAAGCATCAAGACATCGAAGGACCGACCGTCGAGAGAGACCTCTCGGCGTTGGCCGGCGAAACCAGAGAGGTGGTTGAAGCGATGATGAAGAACGTGTACAGCTTAAGCAAAGCTATGGCGATTCTCGGTCTTGTTCAGTTGGGAATTGGGGCTTGGATTTCGTACGCAACTCGCGCTTCACCATTCACAGAAGTTTCCATCCAGAGCTTCGTGTCCTTCGGGTTTCCTTTCTCGCTGGCCTTCATTCTCCGCCAATCTCTGAAGCCGATGATGTTCTTCAAGAAAATGGAAGAACAAGGTAGGTTGCAGATTCTGACTCTGACACTTCAAATTGCTAAAAATTTGAATGCTCTGTTCGTTAGAGTGCGAATTGTTTCCTTCTTGTGTGTAACTGGATTGTCTGTTGGTGTTCTGTTTGCTTTGCTTTCGAGATGAATCCATTTTCTTCCCCATTCTGCAAAAACTTCGAGCCACACAAAATTGGGCTTCCACAAACCTTCCCATAAGAGTGTTCATCAATGAAATTCGTTTCAGAACTATGAATGTTAGTTGTTTTGGATTCTTTTTTACACTTTTTAAGTTTGATTGATTTCTCCCAGAACATCAAATTATGGCATAACAAAATTTGGTTTGTTCTTGGACTTCAGGTTTTTGGTTCATTTGGATATTTTTAAAATGTCTACGTATGATATTGGTATGATATTGTCCACTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGACCTCGTACCAATGGAGATAGTATTCCTAATTTATAAACCCATGACCTTCCACTAAATTAACCAACGTCGGACACTCCCAATCATCCTTAACAAAAAGATACTTGTGCCACAGTACTCCTATTTTAAAGGGACAAGACCCTCTTTTTGGAGGTCATTAGTATAACGCCTCTTCGAAGCTTTATGGGAGAAAGTACAGCTAACGGCTAGTAGAGAGGTCTACCCTGATAGTCAAGATTCTGTTTGTTCGTCTCTTGCTCTCTATTGTAGCAAATCGATATTAGCTTATGTTCTAATTAGATGTTCCAAATGTCTTCTTGAACGAGAACTACCGAAAGAAGTTTACAAGAGTCCTCCCCTAGTTGTGTAAGGAGAGGAGAGCAATATAGGTCAACTGTAGTGGAAGCCAAACGACGGAGCGAAAATCTGTGAATCAAAGAACACTCTTAGACTCTTTGAGGGCTAGGGGGAAGGGTTTCACGAGGAAGCATGTAAGAATTAAAAGACGGTTCTATCCTTCTTCAAATTCTAATACAATTTATTAAATCAAATGGAAATCTCGATAATGACATGATATTATCTTATATTGGATTTTGAATAAAAGGGGAAAAAATAAATCAAATTTAGGTATTAAAAGAATAAATAAATACAAAAGTCATCAGTTTCCACGTGTTCATCAAAGAAGGAGAAATCACATTATAAAGGGTAGAATCGGAACACGTAAGAAGCCTCCACTCTGTACACACCCAAAAACGGGATTCATAGGAGCACCAGCTTTTCCAACTCGATCCCCTACAACCAATTTCTCGTAAGCTCGCCACTATCTTCATTATCATTGGTCCAACTCCCCCTTCTCTGACTTTTACCCCTTTTCTCCAATCACAACGTTCCACGTATACCCCAAAACCAACCATTTGGAATTCGTAACGTTTTTGTTTATTTTATTTTATTTTATTTTTGGCCCACTTCGGACCCCCCACGATGGCCCTTTAAATTGGGAATTCCATTGTGAAAACTTGGCTTTTCTCTCCACCTTCCAAACCCCATCGCCTTTCTGATTGCTGTAGGGTTAGTTTTCCCAATTTCCTCCTCTTTTTCTTTTCTTCTCTTCAACGTAATTCGTTCATCGCCGCATACGGCTATTTTGTTTCTTTGATTTATATATGATTTTTGTTCCTGTTGATTTTCAGTGAAAGGAGGGGAGCGGAGAATCGTCATCTAGCTGGGAATTTTATGGTGTTTTCTATTGTCACGAATACGCAGCGGTCGAATACAGCTTTTCCTCCTACACCTAACAACCATCAGGTCAGTATTAAGAATTTAAGGATTTCTTCCATTTCTCGATATTGATTTTTTCGGTATCTGTTGGTTTCTATGCAAATTGGTTGGTTCTGAGGAAGCGATTATGCTTTCTTCTGTTTTGCTGAAATTTATTGTAATACTTGACGGATATTTTTAATCGAACTTGTGGATGGAAGTAATCTTATGATGTGTTTTTGGTATATGCTTGCGTTTTCTTAGGTTTTTGGACATTACTAACAGCAGGTATTTGCATGTCTTTTCTTCTTTTGTGTGTGTGTGTTGTTGAGTGGCCTCCTATTACTTTTAATGTTTTCTATTCTGTTCCAAATCGATCTCTCTTTGCTTGGAGTTTTGTTTTAGAACATAATTGAGGTATTTGCATATTACCATTCTTTGAAGAAGAATTTGAGTGGCAATAGGATGAGACTAGCTAGGGTTCTAATTTTGTAGAATGGTTTGGCTTAGAGCTTGCGAATGAAGGATGAAACTATGAACAAGGCCTCCACTGAGCACTGAAAACTGATAGCCACTTCAAACCTTTCAAAGGAAACCATGAACTGACCACTGACCGATAAAAAGACATTCCAAAACCAATCACAAGGCAACCTGTTGCAACATTATTAGAACGTTTCTCATGAACAGATGGATATATTTCATTAAAATCCCAATCTTCAAGCCATTTCTGCACACGTCTCCTTGAAAAACACTTTAGCTTTGCATGAACTTCTAACCATCACCTGCGAAGATACACAAATTCTTTCATGTATGCTCATTCCAATTACCTATTTTGACTGGAAAATAATGCTTCCCATGCACAACCACCCTAATAAGAAGATCCTTCTGCTGACCGACCAAAATATGATTGGAAATTAATGTTTCCCGTGCCAAGCACCAGAATTAATTCAATTTGCATACCAACC

mRNA sequence

ATGGCCGCCATTGTTACGCGTAGGTTAAGCTCCAAATTCCTCAGACCAATTCCTTCTTCCACTTTTCTCATCTCCCAAGGCCCTCGCGAACATTTCACCCGAATCCCTTCTACACATTCCGATCCCTGGTTTCCGCAATCGCCCCGACGAACTTTTGCAATTCCTACAGTTGACCTCGTTTCCCCGACGGACACACCTTTTGCAGATCTTGAGGCTCTCAGATCTTACAGGAGATCCGCGAATTTCAATCGAAATTCCATTAGCAGTAACCCTAATTCCGATCATCGGATTCGGGGACCAATCACATCCAGTCCTGGTTTGATTCCGAGATTGAGAAACCCTAGCTTCTTCATCTCAGATTTGGATCAGAAATATGGATTTTCTTCAACTCCTGAGAACGAGAACTTGGAGAAACCCGCTGATTTCAAGCATCAAGACATCGAAGGACCGACCGTCGAGAGAGACCTCTCGGCGTTGGCCGGCGAAACCAGAGAGGTGGTTGAAGCGATGATGAAGAACGTGTACAGCTTAAGCAAAGCTATGGCGATTCTCGGTCTTGTTCAGTTGGGAATTGGGGCTTGGATTTCGTACGCAACTCGCGCTTCACCATTCACAGAAGTTTCCATCCAGAGCTTCGTGTCCTTCGGGTTTCCTTTCTCGCTGGCCTTCATTCTCCGCCAATCTCTGAAGCCGATGATGTTCTTCAAGAAAATGGAAGAACAAGGTAGGTTGCAGATTCTGACTCTGACACTTCAAATTGCTAAAAATTTGAATGCTCTGTTCGTTAGAGTGCGAATTGTTTCCTTCTTTGAAAGGAGGGGAGCGGAGAATCGTCATCTAGCTGGGAATTTTATGGTGTTTTCTATTGTCACGAATACGCAGCGGTCGAATACAGCTTTTCCTCCTACACCTAACAACCATCAGGTCAGTATTAAGAATTTAAGGATTTCTTCCATTTCTCGATATTGATTTTTTCGGTATCTGTTGGTTTCTATGCAAATTGGTTGGTTCTGAGGAAGCGATTATGCTTTCTTCTGTTTTGCTGAAATTTATTGTAATACTTGACGGATATTTTTAATCGAACTTGTGGATGGAAGTAATCTTATGATGTGTTTTTGGTATATGCTTGCGTTTTCTTAGGTTTTTGGACATTACTAACAGCAGGTATTTGCATGTCTTTTCTTCTTTTGTGTGTGTGTGTTGTTGAGTGGCCTCCTATTACTTTTAATGTTTTCTATTCTGTTCCAAATCGATCTCTCTTTGCTTGGAGTTTTGTTTTAGAACATAATTGAGGTATTTGCATATTACCATTCTTTGAAGAAGAATTTGAGTGGCAATAGGATGAGACTAGCTAGGGTTCTAATTTTGTAGAATGGTTTGGCTTAGAGCTTGCGAATGAAGGATGAAACTATGAACAAGGCCTCCACTGAGCACTGAAAACTGATAGCCACTTCAAACCTTTCAAAGGAAACCATGAACTGACCACTGACCGATAAAAAGACATTCCAAAACCAATCACAAGGCAACCTGTTGCAACATTATTAGAACGTTTCTCATGAACAGATGGATATATTTCATTAAAATCCCAATCTTCAAGCCATTTCTGCACACGTCTCCTTGAAAAACACTTTAGCTTTGCATGAACTTCTAACCATCACCTGCGAAGATACACAAATTCTTTCATGTATGCTCATTCCAATTACCTATTTTGACTGGAAAATAATGCTTCCCATGCACAACCACCCTAATAAGAAGATCCTTCTGCTGACCGACCAAAATATGATTGGAAATTAATGTTTCCCGTGCCAAGCACCAGAATTAATTCAATTTGCATACCAACC

Coding sequence (CDS)

ATGGCCGCCATTGTTACGCGTAGGTTAAGCTCCAAATTCCTCAGACCAATTCCTTCTTCCACTTTTCTCATCTCCCAAGGCCCTCGCGAACATTTCACCCGAATCCCTTCTACACATTCCGATCCCTGGTTTCCGCAATCGCCCCGACGAACTTTTGCAATTCCTACAGTTGACCTCGTTTCCCCGACGGACACACCTTTTGCAGATCTTGAGGCTCTCAGATCTTACAGGAGATCCGCGAATTTCAATCGAAATTCCATTAGCAGTAACCCTAATTCCGATCATCGGATTCGGGGACCAATCACATCCAGTCCTGGTTTGATTCCGAGATTGAGAAACCCTAGCTTCTTCATCTCAGATTTGGATCAGAAATATGGATTTTCTTCAACTCCTGAGAACGAGAACTTGGAGAAACCCGCTGATTTCAAGCATCAAGACATCGAAGGACCGACCGTCGAGAGAGACCTCTCGGCGTTGGCCGGCGAAACCAGAGAGGTGGTTGAAGCGATGATGAAGAACGTGTACAGCTTAAGCAAAGCTATGGCGATTCTCGGTCTTGTTCAGTTGGGAATTGGGGCTTGGATTTCGTACGCAACTCGCGCTTCACCATTCACAGAAGTTTCCATCCAGAGCTTCGTGTCCTTCGGGTTTCCTTTCTCGCTGGCCTTCATTCTCCGCCAATCTCTGAAGCCGATGATGTTCTTCAAGAAAATGGAAGAACAAGGTAGGTTGCAGATTCTGACTCTGACACTTCAAATTGCTAAAAATTTGAATGCTCTGTTCGTTAGAGTGCGAATTGTTTCCTTCTTTGAAAGGAGGGGAGCGGAGAATCGTCATCTAGCTGGGAATTTTATGGTGTTTTCTATTGTCACGAATACGCAGCGGTCGAATACAGCTTTTCCTCCTACACCTAACAACCATCAGGTCAGTATTAAGAATTTAAGGATTTCTTCCATTTCTCGATATTGA

Protein sequence

MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLVSPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSFFISDLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLTLQIAKNLNALFVRVRIVSFFERRGAENRHLAGNFMVFSIVTNTQRSNTAFPPTPNNHQVSIKNLRISSISRY
Homology
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BLAST of Carg18682 vs. NCBI nr
Match: XP_023549384.1 (uncharacterized protein LOC111807746 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 255/269 (94.80%), Postives = 262/269 (97.40%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
           MAAIVTRRLSSKFLRPIPSSTFLISQ P EHFTRIPSTHSDP FPQSPR+TFAIPTVDL+
Sbjct: 1   MAAIVTRRLSSKFLRPIPSSTFLISQNPHEHFTRIPSTHSDPSFPQSPRQTFAIPTVDLI 60

Query: 61  SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSFFISD 120
           + + TPFADLEALR +RRSANFNRN I+S+PNSDHRIRGPITSSPGLIPRLRNPSFFISD
Sbjct: 61  N-SHTPFADLEALRPHRRSANFNRNFINSSPNSDHRIRGPITSSPGLIPRLRNPSFFISD 120

Query: 121 LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA 180
           LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA
Sbjct: 121 LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA 180

Query: 181 MAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE 240
           MAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE
Sbjct: 181 MAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE 240

Query: 241 QGRLQILTLTLQIAKNLNALFVRVRIVSF 270
           QGRLQILTLTLQIAKNLNALFVRVRIVSF
Sbjct: 241 QGRLQILTLTLQIAKNLNALFVRVRIVSF 268

[Close]
BLAST of Carg18682 vs. NCBI nr
Match: XP_022954073.1 (uncharacterized protein LOC111456447 [Cucurbita moschata])

HSP 1 Score: 481.5 bits (1238), Expect = 2.3e-132
Identity = 256/269 (95.17%), Postives = 259/269 (96.28%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
           MAAIVTRRLSSKFLRPIPSSTFLISQ PREHFTRIPSTHSDP FPQSPRRTFAIPTVDL+
Sbjct: 1   MAAIVTRRLSSKFLRPIPSSTFLISQNPREHFTRIPSTHSDPSFPQSPRRTFAIPTVDLI 60

Query: 61  SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSFFISD 120
           + + TPFADLEALRSYRRSANFN     SNPN DHRIRGPITSSPGLIPRLRNPSFFISD
Sbjct: 61  N-SHTPFADLEALRSYRRSANFN----LSNPNPDHRIRGPITSSPGLIPRLRNPSFFISD 120

Query: 121 LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA 180
           LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA
Sbjct: 121 LDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKA 180

Query: 181 MAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE 240
           MAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE
Sbjct: 181 MAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEE 240

Query: 241 QGRLQILTLTLQIAKNLNALFVRVRIVSF 270
           QGRLQILTLTLQIAKNLNALFVRVRIVSF
Sbjct: 241 QGRLQILTLTLQIAKNLNALFVRVRIVSF 264

[Close]
BLAST of Carg18682 vs. NCBI nr
Match: XP_022991920.1 (uncharacterized protein LOC111488415 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 3.6e-130
Identity = 253/270 (93.70%), Postives = 257/270 (95.19%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
           MAAIVTRRLSSK+LRP PSST LISQ P EHF RIPSTHSDP FPQSPRRTFAIP VDL+
Sbjct: 1   MAAIVTRRLSSKYLRPFPSSTSLISQNPHEHFARIPSTHSDPSFPQSPRRTFAIPIVDLI 60

Query: 61  SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRG-PITSSPGLIPRLRNPSFFIS 120
           + + TPFADLEALRSYRRSANFN NSISSNPNSDHRIRG PITSSPGLIPRLRNPSFFI 
Sbjct: 61  N-SHTPFADLEALRSYRRSANFNLNSISSNPNSDHRIRGLPITSSPGLIPRLRNPSFFIL 120

Query: 121 DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK 180
           DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK
Sbjct: 121 DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK 180

Query: 181 AMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME 240
           AMAILGLVQLGIGAWISYATRASP TEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME
Sbjct: 181 AMAILGLVQLGIGAWISYATRASPITEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME 240

Query: 241 EQGRLQILTLTLQIAKNLNALFVRVRIVSF 270
           EQGRLQILTLTLQIAKNLNALFVRVRIVSF
Sbjct: 241 EQGRLQILTLTLQIAKNLNALFVRVRIVSF 269

[Close]
BLAST of Carg18682 vs. NCBI nr
Match: XP_022145979.1 (uncharacterized protein LOC111015297 [Momordica charantia])

HSP 1 Score: 310.1 bits (793), Expect = 9.0e-81
Identity = 189/285 (66.32%), Postives = 205/285 (71.93%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIP---SSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTV 60
           MAAIVTRRLSSKFLRP+P   SSTF ISQ P E F  I S       P+  RRTF  P++
Sbjct: 1   MAAIVTRRLSSKFLRPLPSSSSSTFPISQNPIETFPHISS-------PRFNRRTFTNPSI 60

Query: 61  DLV-SPTDTPFADLEALRSYRRSANFNRNSI-------------SSNPNSDHRIRGPITS 120
            L  S T +    L   RS  RS +FN +SI             S +PN D R+RG   S
Sbjct: 61  GLFNSRTASENPSLNTARSCCRSTDFNPSSITKVIAPNFTAPIQSKSPNFDFRVRGTTGS 120

Query: 121 SPGLIPRLRNPSFFISDLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGET 180
               IP  RNP+       QKYGFSST ENEN +KPA+  HQDIEGPTVERDLSALAGET
Sbjct: 121 DTCSIPIPRNPNLNY----QKYGFSSTSENENAQKPAELMHQDIEGPTVERDLSALAGET 180

Query: 181 REVVEAMMKNVYSLSKAMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAF 240
           R V+E MMKNVYSLSKAMA+LGLVQLGIG WISYATR SP TEVSIQSFV+FGFPFSLAF
Sbjct: 181 RGVLEGMMKNVYSLSKAMAVLGLVQLGIGGWISYATRGSPITEVSIQSFVAFGFPFSLAF 240

Query: 241 ILRQSLKPMMFFKKMEEQGRLQILTLTLQIAKNLNALFVRVRIVS 269
           ILRQSLKPM+FFKKMEEQGRLQILTLTLQIAKNLN LFVRVR VS
Sbjct: 241 ILRQSLKPMLFFKKMEEQGRLQILTLTLQIAKNLNVLFVRVRSVS 274

[Close]
BLAST of Carg18682 vs. NCBI nr
Match: XP_008461275.1 (PREDICTED: uncharacterized protein LOC103499911 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 2.6e-80
Identity = 180/269 (66.91%), Postives = 201/269 (74.72%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
           MAAIVTRRLSS   RP   STFLISQ P + FTRIPS HSDP F +SPRRT         
Sbjct: 1   MAAIVTRRLSSNLFRPFLPSTFLISQNPHKPFTRIPSPHSDPSFLRSPRRT--------- 60

Query: 61  SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSF-FIS 120
           SP  T    L+   S  +S   +  + + +P    +   PI S    I +L NP+F F+S
Sbjct: 61  SPNTT---TLDLFNSISKSITPDLQTQNKSP----KFNWPIGSVSYSIMKLTNPNFVFVS 120

Query: 121 DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK 180
           D D+K  FS+TPE E+ +K  DFKHQDIEGPTVERDLSALA ETR+VVEAMMKNVY LSK
Sbjct: 121 DFDRKSRFSTTPEKESEQKQDDFKHQDIEGPTVERDLSALANETRDVVEAMMKNVYRLSK 180

Query: 181 AMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME 240
           AMA+LGLVQLG+GAWISY TR SP TEVSIQSFV+FGFPFSLAFILRQSLKPMMFFKKME
Sbjct: 181 AMAVLGLVQLGVGAWISYITRGSPITEVSIQSFVAFGFPFSLAFILRQSLKPMMFFKKME 240

Query: 241 EQGRLQILTLTLQIAKNLNALFVRVRIVS 269
           EQGRLQILTL+LQI KNLNALFVRVR VS
Sbjct: 241 EQGRLQILTLSLQIGKNLNALFVRVRTVS 253

[Close]
BLAST of Carg18682 vs. TAIR10
Match: AT3G12650.1 (unknown protein)

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-45
Identity = 107/193 (55.44%), Postives = 132/193 (68.39%), Query Frame = 0 

Query: 88  SSNPNSDHRIRGPITSSPGL--------IPRLR----NPSFFISDLDQKYGFSSTPENEN 147
           SS+   +H I G +T   GL        I +LR    +P +F +   +       PE   
Sbjct: 30  SSSLIRNHLIHGSVTKELGLLRSFSVFNIDKLRSETWSPRYFSTPSGETE--PKKPEESK 89

Query: 148 LEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILGLVQLGIGAWI 207
            E+    KHQ+IEGPTVERDLSAL  ETR+V+E MMKN+YSLS AM  LGL QL +GA I
Sbjct: 90  EEELQKMKHQEIEGPTVERDLSALGNETRQVLEGMMKNMYSLSGAMGALGLTQLILGAAI 149

Query: 208 SYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLTLQIAK 267
            YATRA P  E++IQS ++FGFPF++A ++R+SLKPM FFKKMEE GRLQILTLTLQ+AK
Sbjct: 150 LYATRADPMKEMTIQSCIAFGFPFAMALMVRRSLKPMYFFKKMEELGRLQILTLTLQVAK 209

Query: 268 NLNALFVRVRIVS 269
           NLN LFVR R+VS
Sbjct: 210 NLNLLFVRARVVS 220

[Close]
BLAST of Carg18682 vs. TrEMBL
Match: tr|A0A1S3CFJ7|A0A1S3CFJ7_CUCME (uncharacterized protein LOC103499911 OS=Cucumis melo OX=3656 GN=LOC103499911 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80
Identity = 180/269 (66.91%), Postives = 201/269 (74.72%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
           MAAIVTRRLSS   RP   STFLISQ P + FTRIPS HSDP F +SPRRT         
Sbjct: 1   MAAIVTRRLSSNLFRPFLPSTFLISQNPHKPFTRIPSPHSDPSFLRSPRRT--------- 60

Query: 61  SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSF-FIS 120
           SP  T    L+   S  +S   +  + + +P    +   PI S    I +L NP+F F+S
Sbjct: 61  SPNTT---TLDLFNSISKSITPDLQTQNKSP----KFNWPIGSVSYSIMKLTNPNFVFVS 120

Query: 121 DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK 180
           D D+K  FS+TPE E+ +K  DFKHQDIEGPTVERDLSALA ETR+VVEAMMKNVY LSK
Sbjct: 121 DFDRKSRFSTTPEKESEQKQDDFKHQDIEGPTVERDLSALANETRDVVEAMMKNVYRLSK 180

Query: 181 AMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME 240
           AMA+LGLVQLG+GAWISY TR SP TEVSIQSFV+FGFPFSLAFILRQSLKPMMFFKKME
Sbjct: 181 AMAVLGLVQLGVGAWISYITRGSPITEVSIQSFVAFGFPFSLAFILRQSLKPMMFFKKME 240

Query: 241 EQGRLQILTLTLQIAKNLNALFVRVRIVS 269
           EQGRLQILTL+LQI KNLNALFVRVR VS
Sbjct: 241 EQGRLQILTLSLQIGKNLNALFVRVRTVS 253

[Close]
BLAST of Carg18682 vs. TrEMBL
Match: tr|A0A0A0K8D3|A0A0A0K8D3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428810 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 181/270 (67.04%), Postives = 194/270 (71.85%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPSTHSDPWFPQSPRRTFAIPTVDLV 60
           MAAIVTRRLSS   RP   STFLISQ P E  TR  S HSDP F  S RRT    TVDL 
Sbjct: 1   MAAIVTRRLSSNIFRPFLPSTFLISQIPHEPLTRFHSPHSDPSFLGSSRRTSPNTTVDLF 60

Query: 61  SPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGLIPRLRNPSFF-IS 120
           +           L    ++ NFN                PI S    I +LRNPSF  IS
Sbjct: 61  NSISKSIT--HDLLVQNKTLNFN---------------DPIGSGSYSIMKLRNPSFVSIS 120

Query: 121 DLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSK 180
           D D+K  FS+T E EN +KP DFKHQDIEGPTVERDLSALA ETR+V+EAMMKNVY LSK
Sbjct: 121 DFDRKSRFSTTSEKENEQKPDDFKHQDIEGPTVERDLSALANETRDVIEAMMKNVYRLSK 180

Query: 181 AMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKME 240
           AMA+LGLVQLGIGAWISY TR SP TEVSIQSFV+FGFPFS+AFILRQSLKPMMFFKKME
Sbjct: 181 AMAVLGLVQLGIGAWISYITRGSPITEVSIQSFVAFGFPFSMAFILRQSLKPMMFFKKME 240

Query: 241 EQGRLQILTLTLQIAKNLNALFVRVRIVSF 270
           EQGRLQILTL+LQI KNLNALFVRVR VSF
Sbjct: 241 EQGRLQILTLSLQIGKNLNALFVRVRTVSF 253

[Close]
BLAST of Carg18682 vs. TrEMBL
Match: tr|B9HNM6|B9HNM6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G063700v3 PE=4 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 2.1e-54
Identity = 152/312 (48.72%), Postives = 193/312 (61.86%), Query Frame = 0 

Query: 2   AAIVTRRLSSKFLRPIPS---STFLISQGPREH--------FTRIPSTHSD----PWFPQ 61
           + +++RRLS K L+P PS   S+  IS GP+ H         ++ P+ +++      F  
Sbjct: 47  SVVISRRLSHKLLKPSPSSSISSLFISHGPQNHPSLDSNSSLSQQPTLNTNLNISNSFSS 106

Query: 62  SPRRTFAIPTVDLVSPTDTPFADLEALRSY------RRSANFNRNSISS--------NP- 121
            P R   +    L+ P + P   L  +RSY       R   F R+S  S        NP 
Sbjct: 107 FPARYSTLEHQSLIDP-EPPNLTLYFIRSYSCSSTKTRGHGFTRSSFFSASDIGKAQNPA 166

Query: 122 -NSDHRIRGPI---TSSPGLIPRLRNPSFF-ISDLDQKYGFSSTPENEN------LEKPA 181
              D   +G I   +    L   L+NP F  + +L  +Y  SS   +E+       E P+
Sbjct: 167 KTPDFNQKGSIFTKSKDSSLDSELKNPRFIRLLNLKPRYFSSSNSPSESDKSQNQSEHPS 226

Query: 182 ---DFKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILGLVQLGIGAWISY 241
              D KHQ+IEGPTVERDLSALA ETREV+E+MMKN+Y LS+A+A+LGLVQLG+GA ISY
Sbjct: 227 QIPDLKHQEIEGPTVERDLSALANETREVLESMMKNIYGLSRAVAVLGLVQLGLGALISY 286

Query: 242 ATRASPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLTLQIAKNL 270
            T+A+P TEVSIQSFV+FGFPF+LAF+LRQSLKPM FFKKMEE GRLQILTLTLQ+AKNL
Sbjct: 287 VTKATPMTEVSIQSFVAFGFPFTLAFMLRQSLKPMYFFKKMEELGRLQILTLTLQVAKNL 346

[Close]
BLAST of Carg18682 vs. TrEMBL
Match: tr|A0A2P5E742|A0A2P5E742_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_228720 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 141/282 (50.00%), Postives = 180/282 (63.83%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRPIPSSTFLISQGPREHFTRIPS--THSDPW---------FPQSPR 60
           MAA+++RRLSSK L+P  + T  +S  P  HF++  S  +H  P           P+ PR
Sbjct: 1   MAAMISRRLSSKLLKPFHTRTRSLSLNP--HFSQSTSDPSHQKPMEVSSFESSTCPEKPR 60

Query: 61  RTFAI--PTVDLVSPTDTPFADLEALRSYRRSANFNRNSISSNPNSDHRIRGPITSSPGL 120
           +   I    V +V P   PF     L   R S +F     S      HR+      +P +
Sbjct: 61  KLAEIWHRRVAVVDP--KPFC--LGLGLDRSSPSFGTKFYS------HRLNWVSHENPRI 120

Query: 121 IPRLRNPSFFISDLDQKYGFSSTPENENLEKPADFKHQDIEGPTVERDLSALAGETREVV 180
           +      S    + ++  G      ++N E    FKHQ+IEGPTVERDLS LA ETR+V+
Sbjct: 121 LSTTSGSSSSDPESEKPNGGPIPYPSQNPE----FKHQEIEGPTVERDLSPLANETRDVL 180

Query: 181 EAMMKNVYSLSKAMAILGLVQLGIGAWISYATRASPFTEVSIQSFVSFGFPFSLAFILRQ 240
           E MM N+Y LS+A+A+LGL+QLG+GAWISY TR+SP TEVSIQSFV+FGFPF+LAF+LRQ
Sbjct: 181 EKMMMNIYGLSRAVALLGLLQLGVGAWISYITRSSPITEVSIQSFVAFGFPFTLAFMLRQ 240

Query: 241 SLKPMMFFKKMEEQGRLQILTLTLQIAKNLNALFVRVRIVSF 270
           +LKPM FFKKMEEQGRLQILTLTLQ+AKNLN LF+R+R VSF
Sbjct: 241 ALKPMYFFKKMEEQGRLQILTLTLQVAKNLNLLFIRLRGVSF 266

[Close]
BLAST of Carg18682 vs. TrEMBL
Match: tr|A0A2N9IKT8|A0A2N9IKT8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52797 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.9e-52
Identity = 149/308 (48.38%), Postives = 184/308 (59.74%), Query Frame = 0 

Query: 1   MAAIVTRRLSSKFLRP----IPSSTFLISQGPREHFTR--IPSTHSDPWFPQSPRRTFAI 60
           MAA+++RR SSK L+       SST  IS  P  H +     ST S+P     P  T + 
Sbjct: 1   MAAMISRRFSSKLLKTHHIFSSSSTSFISTKPFSHLSSQYFNSTLSNPNLNSIPPSTNST 60

Query: 61  PTVDLVSPTDTPFADLEALRSYRRSANFNRNSISS---NPNSDHR----------IRGPI 120
             VD  +P             +++  +FN  +I S   +PN   R             P+
Sbjct: 61  TIVDFQTP------------PHQKPQSFNLGTIGSLNCSPNEKPRNTLAYDSLIHTGKPL 120

Query: 121 TSSPGLIPRLR-----NPSFFISDLDQKYG----FSST----PENENLEKPAD------- 180
             +  L  + +      PS     LD  YG    F ST    PE+E  +KP++       
Sbjct: 121 NPTKNLEFKHQLVFGSKPSIQSFKLDWFYGGKPRFYSTSETPPESEKPQKPSEYPSQNPA 180

Query: 181 FKHQDIEGPTVERDLSALAGETREVVEAMMKNVYSLSKAMAILGLVQLGIGAWISYATRA 240
           FKHQ+IEGPTVERDLS LA ETREV++ MMK +Y LSKA+A LGLVQLG+GAWISY T++
Sbjct: 181 FKHQEIEGPTVERDLSPLANETREVLQGMMKTIYGLSKAVAFLGLVQLGLGAWISYITKS 240

Query: 241 SPFTEVSIQSFVSFGFPFSLAFILRQSLKPMMFFKKMEEQGRLQILTLTLQIAKNLNALF 270
           +P TEVSI S V+FGFPFSLAF+LRQSLKPM FFKKMEEQGRLQILTLTLQ+ KNLN LF
Sbjct: 241 APITEVSIMSAVAFGFPFSLAFMLRQSLKPMYFFKKMEEQGRLQILTLTLQVVKNLNVLF 296

The following BLAST results are available for this feature:
BLAST of Carg18682 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023549384.11.6e-13394.80uncharacterized protein LOC111807746 [Cucurbita pepo subsp. pepo][more]
XP_022954073.12.3e-13295.17uncharacterized protein LOC111456447 [Cucurbita moschata][more]
XP_022991920.13.6e-13093.70uncharacterized protein LOC111488415 [Cucurbita maxima][more]
XP_022145979.19.0e-8166.32uncharacterized protein LOC111015297 [Momordica charantia][more]
XP_008461275.12.6e-8066.91PREDICTED: uncharacterized protein LOC103499911 [Cucumis melo][more]
BLAST of Carg18682 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12650.13.3e-4555.44unknown protein[more]
BLAST of Carg18682 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg18682 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFJ7|A0A1S3CFJ7_CUCME1.7e-8066.91uncharacterized protein LOC103499911 OS=Cucumis melo OX=3656 GN=LOC103499911 PE=... [more]
tr|A0A0A0K8D3|A0A0A0K8D3_CUCSA1.1e-7967.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428810 PE=4 SV=1[more]
tr|B9HNM6|B9HNM6_POPTR2.1e-5448.72Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G063700v3 PE=... [more]
tr|A0A2P5E742|A0A2P5E742_9ROSA1.5e-5250.00Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_228720 PE=4 S... [more]
tr|A0A2N9IKT8|A0A2N9IKT8_FAGSY9.9e-5248.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52797 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18682-RACarg18682-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..104
NoneNo IPR availablePANTHERPTHR37222FAMILY NOT NAMEDcoord: 1..269

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg18682Cla015229Watermelon (97103) v1carwmB0344
Carg18682Csa7G428810Cucumber (Chinese Long) v2carcuB0387
Carg18682MELO3C023538Melon (DHL92) v3.5.1carmeB0359
Carg18682ClCG09G004280Watermelon (Charleston Gray)carwcgB0345
Carg18682CSPI07G19370Wild cucumber (PI 183967)carcpiB0391
Carg18682Cucsa.050220Cucumber (Gy14) v1carcgyB0413
Carg18682CmaCh17G009470Cucurbita maxima (Rimu)carcmaB0497
Carg18682CmoCh17G009220Cucurbita moschata (Rifu)carcmoB0480
Carg18682Lsi02G025860Bottle gourd (USVL1VR-Ls)carlsiB321
Carg18682Cp4.1LG12g06760Cucurbita pepo (Zucchini)carcpeB0493
Carg18682MELO3C023538.2Melon (DHL92) v3.6.1carmedB0364
Carg18682CsaV3_7G031200Cucumber (Chinese Long) v3carcucB0390
Carg18682Cla97C09G166560Watermelon (97103) v2carwmbB0370
Carg18682Bhi09G000519Wax gourdcarwgoB0439
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg18682Wax gourdcarwgoB0437
Carg18682Wax gourdcarwgoB0438
Carg18682Silver-seed gourdcarcarB207
Carg18682Silver-seed gourdcarcarB288
Carg18682Silver-seed gourdcarcarB379
Carg18682Silver-seed gourdcarcarB380
Carg18682Silver-seed gourdcarcarB381
Carg18682Silver-seed gourdcarcarB382
Carg18682Silver-seed gourdcarcarB383
Carg18682Cucumber (Gy14) v2carcgybB0365
Carg18682Cucumber (Gy14) v2carcgybB0366
Carg18682Cucurbita maxima (Rimu)carcmaB0496
Carg18682Cucurbita maxima (Rimu)carcmaB0498
Carg18682Cucurbita maxima (Rimu)carcmaB0499
Carg18682Cucurbita moschata (Rifu)carcmoB0479
Carg18682Cucurbita moschata (Rifu)carcmoB0481
Carg18682Cucurbita moschata (Rifu)carcmoB0482
Carg18682Cucurbita pepo (Zucchini)carcpeB0494
Carg18682Cucurbita pepo (Zucchini)carcpeB0495
Carg18682Wild cucumber (PI 183967)carcpiB0390
Carg18682Cucumber (Chinese Long) v2carcuB0386
Carg18682Cucumber (Chinese Long) v3carcucB0389
Carg18682Bottle gourd (USVL1VR-Ls)carlsiB322
Carg18682Melon (DHL92) v3.5.1carmeB0360
Carg18682Melon (DHL92) v3.6.1carmedB0365
Carg18682Watermelon (Charleston Gray)carwcgB0347
Carg18682Watermelon (Charleston Gray)carwcgB0346
Carg18682Watermelon (97103) v1carwmB0345
Carg18682Watermelon (97103) v1carwmB0346
Carg18682Watermelon (97103) v2carwmbB0369
Carg18682Watermelon (97103) v2carwmbB0371