CSPI07G19370 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACATAATTAACGAAAATAGTATTTGATAATAATATCGATTCTTTCTTTCTCTGTCTCTCTCTCTCACAAACATTTCCAAGTTGAAAATCAATAACCCAAAAATGGCCGCCATTGTTACGCGCAGGTTAAGCTCCAACATTTTCAGACCATTTCTTCCTTCCACCTTTCTCATTTCTCAAATCCCTCACGAGCCCTTGACCCGATTCCATTCTCCACATTCCGATCCCTCGTTTCTGGGATCTTCCCGACGAACATCTCCTAACACTACGGTTGACCTCTTCAATTCCATTTCGAAATCAATCACTCACGATTTACTGGTTCAGAATAAAACCCCTAATTTCAATGACCCAATTGGATCTGGTTCTTATTCGATTATGAAATTGAGAAACCCTAGCTTCGTTTCCATCTCGGATTTCGATCGGAAATCCAGGTTTTCTACAACTTCCGAGAAGGAGAACGAGCAGAAACCGGATGATTTCAAGCACCAAGACATCGAAGGGCCGACCGTGGAGAGAGATCTATCGGCGTTGGCTAATGAAACCAGAGACGTGATTGAAGCGATGATGAAGAATGTATACAGGCTAAGTAAAGCTATGGCGGTTCTGGGTTTGGTTCAACTCGGCATTGGGGCTTGGATTTCGTATATAACCCGGGGTTCGCCGATTACAGAAGTTTCAATCCAGAGCTTTGTGGCGTTCGGGTTTCCTTTCTCGATGGCGTTTATTTTGCGACAGTCTTTGAAGCCGATGATGTTCTTCAAGAAAATGGAGGAACAAGGTAGGTTGCAGATTCTAACACTGAGTCTTCAGATTGGTAAGAATTTGAATGCTCTGTTTGTTAGAGTACGAACTGTTTCTTTCTTGTGTGTAACTGGATTGTCTGTTGGAATTTTGTTTGCTTTGCTTTCCAGATGAATCCATTTGAGTTTGAAATTGTTGGATTATCTTGGTCATAATGAACAAATGTTCTGTTCATGTAATGACCTGAATTTTGAAAACAATGAAGGTTATTACACCACCTATTTACAACACACATACCAATTAGATCGCGTTCATGTTCACATTTCAGCCTACCGTCTCGATCCAAGAAGCTGTATTAAATTTGCCTTCACTTGTTTCTCGTGGGTAGTGTGTTTAAACCTTTGCAGTGCTATCTATTCGTTTTTATGTGTTTGGTTAATAGATGA ATGGCCGCCATTGTTACGCGCAGGTTAAGCTCCAACATTTTCAGACCATTTCTTCCTTCCACCTTTCTCATTTCTCAAATCCCTCACGAGCCCTTGACCCGATTCCATTCTCCACATTCCGATCCCTCGTTTCTGGGATCTTCCCGACGAACATCTCCTAACACTACGGTTGACCTCTTCAATTCCATTTCGAAATCAATCACTCACGATTTACTGGTTCAGAATAAAACCCCTAATTTCAATGACCCAATTGGATCTGGTTCTTATTCGATTATGAAATTGAGAAACCCTAGCTTCGTTTCCATCTCGGATTTCGATCGGAAATCCAGGTTTTCTACAACTTCCGAGAAGGAGAACGAGCAGAAACCGGATGATTTCAAGCACCAAGACATCGAAGGGCCGACCGTGGAGAGAGATCTATCGGCGTTGGCTAATGAAACCAGAGACGTGATTGAAGCGATGATGAAGAATGTATACAGGCTAAGTAAAGCTATGGCGGTTCTGGGTTTGGTTCAACTCGGCATTGGGGCTTGGATTTCGTATATAACCCGGGGTTCGCCGATTACAGAAGTTTCAATCCAGAGCTTTGTGGCGTTCGGGTTTCCTTTCTCGATGGCGTTTATTTTGCGACAGTCTTTGAAGCCGATGATGTTCTTCAAGAAAATGGAGGAACAAGGTAGGTTGCAGATTCTAACACTGAGTCTTCAGATTGGTAAGAATTTGAATGCTCTGTTTGTTAGAGTACGAACTGTTTCTTTCTTGTGTGTAACTGGATTGTCTGTTGGAATTTTGTTTGCTTTGCTTTCCAGATGA ATGGCCGCCATTGTTACGCGCAGGTTAAGCTCCAACATTTTCAGACCATTTCTTCCTTCCACCTTTCTCATTTCTCAAATCCCTCACGAGCCCTTGACCCGATTCCATTCTCCACATTCCGATCCCTCGTTTCTGGGATCTTCCCGACGAACATCTCCTAACACTACGGTTGACCTCTTCAATTCCATTTCGAAATCAATCACTCACGATTTACTGGTTCAGAATAAAACCCCTAATTTCAATGACCCAATTGGATCTGGTTCTTATTCGATTATGAAATTGAGAAACCCTAGCTTCGTTTCCATCTCGGATTTCGATCGGAAATCCAGGTTTTCTACAACTTCCGAGAAGGAGAACGAGCAGAAACCGGATGATTTCAAGCACCAAGACATCGAAGGGCCGACCGTGGAGAGAGATCTATCGGCGTTGGCTAATGAAACCAGAGACGTGATTGAAGCGATGATGAAGAATGTATACAGGCTAAGTAAAGCTATGGCGGTTCTGGGTTTGGTTCAACTCGGCATTGGGGCTTGGATTTCGTATATAACCCGGGGTTCGCCGATTACAGAAGTTTCAATCCAGAGCTTTGTGGCGTTCGGGTTTCCTTTCTCGATGGCGTTTATTTTGCGACAGTCTTTGAAGCCGATGATGTTCTTCAAGAAAATGGAGGAACAAGGTAGGTTGCAGATTCTAACACTGAGTCTTCAGATTGGTAAGAATTTGAATGCTCTGTTTGTTAGAGTACGAACTGTTTCTTTCTTGTGTGTAACTGGATTGTCTGTTGGAATTTTGTTTGCTTTGCTTTCCAGATGA
BLAST of CSPI07G19370 vs. TrEMBL
Match: A0A0A0K8D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428810 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 1.4e-141 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 1
BLAST of CSPI07G19370 vs. TrEMBL
Match: G7LDL9_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_8g036520 PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.2e-58 Identity = 142/281 (50.53%), Postives = 184/281 (65.48%), Query Frame = 1
BLAST of CSPI07G19370 vs. TrEMBL
Match: A0A061DVB9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005902 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 7.2e-58 Identity = 144/268 (53.73%), Postives = 183/268 (68.28%), Query Frame = 1
BLAST of CSPI07G19370 vs. TrEMBL
Match: B9RHF0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1524270 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.7e-57 Identity = 129/237 (54.43%), Postives = 168/237 (70.89%), Query Frame = 1
BLAST of CSPI07G19370 vs. TrEMBL
Match: B9HNM6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s06820g PE=4 SV=2) HSP 1 Score: 228.8 bits (582), Expect = 7.9e-57 Identity = 144/277 (51.99%), Postives = 184/277 (66.43%), Query Frame = 1
BLAST of CSPI07G19370 vs. TAIR10
Match: AT3G12650.1 (AT3G12650.1 unknown protein) HSP 1 Score: 195.3 bits (495), Expect = 4.9e-50 Identity = 122/239 (51.05%), Postives = 156/239 (65.27%), Query Frame = 1
BLAST of CSPI07G19370 vs. NCBI nr
Match: gi|449436283|ref|XP_004135922.1| (PREDICTED: uncharacterized protein LOC101204591 [Cucumis sativus]) HSP 1 Score: 510.4 bits (1313), Expect = 2.0e-141 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 1
BLAST of CSPI07G19370 vs. NCBI nr
Match: gi|659122690|ref|XP_008461275.1| (PREDICTED: uncharacterized protein LOC103499911 [Cucumis melo]) HSP 1 Score: 454.5 bits (1168), Expect = 1.3e-124 Identity = 243/271 (89.67%), Postives = 253/271 (93.36%), Query Frame = 1
BLAST of CSPI07G19370 vs. NCBI nr
Match: gi|1000979251|ref|XP_015571003.1| (PREDICTED: uncharacterized protein LOC8260783 isoform X1 [Ricinus communis]) HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59 Identity = 142/289 (49.13%), Postives = 191/289 (66.09%), Query Frame = 1
BLAST of CSPI07G19370 vs. NCBI nr
Match: gi|743837085|ref|XP_011025417.1| (PREDICTED: uncharacterized protein LOC105126290 isoform X2 [Populus euphratica]) HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59 Identity = 148/297 (49.83%), Postives = 192/297 (64.65%), Query Frame = 1
BLAST of CSPI07G19370 vs. NCBI nr
Match: gi|645250660|ref|XP_008231314.1| (PREDICTED: uncharacterized protein LOC103330501 [Prunus mume]) HSP 1 Score: 235.7 bits (600), Expect = 9.3e-59 Identity = 152/309 (49.19%), Postives = 190/309 (61.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |