Carg03456 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03456
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Lipid-A-disaccharide synthase
Location	Cucurbita_argyrosperma_scaffold_005 : 1982409 .. 1986630 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACCAAGTCAACCGGATCCGGGTTTAAGGTCATTGGCTTTTCATCACCGTAAACGTTTTCGCGGGAGGCAAACGCAGTTGCCGCGGCGGTGCTTTTCTGTGCCGTCAAATGTTATGGATGTACTGGAAATGCTGCTCTGAACGACGGCGAATGATGCGGGGTTTTCTCAACAATATGAACAGGTACTTATCGACCTACAGAGTAGCCGCTAATGCCTTCGAGATGTCTGCAAAACATGGCGAATTGAGGGTTTTCATTGTCGCCGGAGAAGTCTCCGGCGACACCATCGCTTCTCGTCTCATGACATCTCTGAGAACGCTATCTCCTGTTCCTGTTCGTTTCTCCGGCGTCGGAGGGTAAGCTGTTACTTTTTTGAAGTGTCCGAATCGCCTGTTCAAAGGGACATATTTCTGTTTATGGCTGAACCGACAAGCTATAGTCTAAGATTTCTGCCATTTTGGTCTCTTCCGTGTTTTGAATACTGTCGGTTGTATGTTAACTTTCATTGATTTCGTTTCAGTGATAGTCTGTTTCTTTAACTACCATTGAAATTTCACATGTTTTGTTACAGCTCCATGATGTCCAAGCAAGGATTGAAGTCTCTATTCCCCATGGAGGATATTGCAGTAATGGGAATATGGGAGCTATTTCCGCATCTAATGAAAATTAGAGTGAGTAGTTCAAAACATAATATACTGGTGTTCTACTGTTTCTCTTTTTAATGCAAGAGAAGAACAGAACCTTCCTCATAGTCATATGATACAACTGTTTGACAAGAAACGAGCTTCCCATCAAAGAATGAAGAACACAAAAGTAAAAAGGGGAAGTAAGTTAAAAAGAATTATGAAAAAGCCACTTCAATTGATATTTTCATCATAAGAATCATGGAATTATGAAAGAGCTTGGAGATAACACACCCAGTAGTCCCAAGAATTGGACGAGATTCCAAAATCCACAATGGTTCGATGTGTCCCCTAAGCAACTATCTGTTCATGTTAGTAATGATAATGACTACTTTTTTATCTGTAAGATTGGTGTTATATGAATGTGATTTCCTCCGTGTCATGAGATTTGTGGATTGCCTGGTTTATATGGAGACTTTGGCAATGCCAGGAAAAGCTCAAGAGGACCGTTGAAGCTGCTATAGTGTTTCAACCTCATGTCGTTGTAACGGTGGACTCTAAAGGGTTCTCGTTCCGCCTCCTAAAGCAGATACGTGGTAATTTGCACCAGCATCTCATGGACTATTGAGTTTTGTTACTTGCTTATACAATTAAAACCACATGTGAACACTGAGGTGGTTTTGCAGCTAGATATCGAAACGATAAATTGGCTTGTCCAGTACATTTCCATTACGTAGCACCGTCATTCTGGGCTTGGAAAGGGGGTGAAGAAAGGCTGAAAGGTCTTGTTGAATTTGTTGACCACATTTTATGCATACTTCCAAATGAAGCAGAAGTTTGTAAATCAAATGGATTGGCAGCGACCTTTGTGGGGCATCCCATTCTCGAGGATACGTTAGACCTCAATGCTGTAAGATATGTCTTATTCCTGATTAATGCAGTGTATAAATTCATCATCTTTGAATTAAATTCATGAAAAAGTGGGCTGCATTCATTGTCGTTTATCTTACTCTAGTTGACTCAGTTTAATGCAGCCACACTAATGCCCTGTGATTTTATGTAGGGGAAGGATGCCTCATTACTGGAGTTGAAAATACAGGGAAGTTGCAAAGATTTTCTAATTCAAAACGACATTCGTGCTGGTAATACGCCTCGCCTAAACTTTCCTTGAATGTAGATTTCTACTTGGCAGTATCTGTGTATTGAACACTTTTCTCATTTTATGAACCATGACAAGCTTTCAGTCTCATGATATCCAATCATTAGTATTTTTCAAATATTTTGAACATAGATTCCTTGAGCAAAACCTTATAAAGGTGTTACTCGTTTTGTAACGCTATTTTGTCTTTTTATGTAAAAATGATTTTGAGCAAAGTTTAGGTATTTGTTAAAAGAAAAAAGAAGCTTAAATCTGGATTTTGTATTGAATCAGTTAAAAATCCTTAGTGAGACATTTGAGGGAATTTTGTTTTTGAAGATGCAACAATCATTTCCCTGCTTCCTGGAAGTAGGTTACAGGAAGTCAGCAGAATGATTCCAATCTATGCAAGTACGTTGGAGTTACTGAAAGAATCCTTCCCGGAGCTGACAACAATCATCCACGTTGCTCCTAATGCTGATGTACAGGACCATATAAGTGGAGTCCTTCATAAGTGGCCTGTGCCTGCCGTATTGGTCGCAGGAGGATCACCACAAGCAAAATATGATGCATTCAGTGTAAGTCCTTTCAGTCTACTCAATGTAACTAACATTAAAGAAAATTATTGGTTTTTCTTCTAGTATACAAGGCACCGAAAATGAGACCGAGTGGAAAGAAAGGGGGAAGTTAAGTTACAGAAATGGTAGTCGTGGACTGGTACCGCAGTACTTCCTACTTACTTTTGGTAATCCTTATTGTGATCTCTTACTCTGGGCTAAGATAGTCTCTTAAGTGCTTACTGTAATAGCCCAAGCTCACCACTAGCAGATATTGTCCGCTTTTGCCCGTTACGTATGGCCATCGGCCTCGTGGTTTTAAAACGCGTCTACTAGAGAGAGGTTTCTACACCCTTATAAGAAAGGTTTTGTTCTCCTTTTCACAATCGATGTGGGATCTCATAATCCACCTCCCTTGGGACCCCGGCGTTCTCGCTGACACACCGCCCAGTGTCTGGCTCTGATACCATTTGTAATAGCTCAAGCTCACTGCTAGCAAATATTGTCCACTTTGGCCCGTTATGTATCACCGTCAGCCTCATAGTTTTAGCGTCTACTGGGGAGAGGTTTCCACACCTGTATAAGAAAGGTTTTGTTCCCCTCTCCAACCAAGGTGAGATCTCACAACAACAGTTCCCATTTGTAACTCCTATGGTTGAAAATTTGAACCCCGATTCTTGGACATAGTGATTATGACACCCATGCAATACCTCATGCATTCTAGGAGATAAAATTGTTTCAGGTTTGCTGTCACTACTACGTGGTAGTGTCTTGCCTTGAGCCTTGTGAAAGTCGAAAGGTCAAATGATTTTGAGGTAATGAAGTAAAATAGTTGTAAGAACTGGACCTTGAGAATATCCACGCCTGTACCCAGCAGCTACCGTAACCTGCAGACTTTTCTTTTTCCAAGCTCCTAATGCATAGATTTTTTAGCCGACTAACTATTGCTGCTATTAAAATCGTAGATGGAAATTAAGTTCCTTTGATTGAAATGAGTCTCCATTCACGTTTATGTTTGTAGCAGGATTTTACTTCCTTTCTTCTTCCTTGTTATTTGATTTGATTATTTACTTTTCTGAACTATGAGGGCACGGCATGTATTTGGCTTAGTACTGTTACTCATAATGCCAGAACTTAACCACTCAAGCACTAATGAGATTGTTTTGCTTTGGAAGCTGTGACTCGTCAATAGGATGCAATCCTAATCTGAACTTTACATGCCTTGCAGGCAAGTAAGGTTGCATTATGTACTTCTGGTACAGTTGCTACGGAGTTGCAGCTTGCTCGGTTACCTTGTGTGGTTGCTTACCGAGCTCATTTCTTAACCGAATGGTTAATTCGACACAAAGCGAAAGTATCATACATCTCCCTTCCAAATATTCTCTTAAACTCACCTGTTATCCCAGAGGCACTGTTTCAAGAATGCACTCCAGGAAGGCTACAGTCGATGCTCAAGTAACATGATTTTGCATTTTTCATTGCAAACTATCTTTTCCATTAAAGCACAAACATTATCTCATCATCTTAGCAGACACCATAGGCTTGTATTTGGACTGGATATAACTACATATTGCTTGAATTGGTCCGTTTATCATTGCAGGGAATTGATACGTAACGACGGTCTACGCAACAAACAGATTGTCGCGGCCAAAGAGGTTCTTAAACTGCTGTGTCCTTCAAAAGAAAGTACTAAGATCTTAGCACAGGCGGGTTTGAAATGCACATCTTCATCTTCAATCTGCACACCCAGCATGATAGCGGCATCTACCATACTGTACTATGAAAGGACGCAGTAATTGGGTTGGAATCAGCCAATTTTGCAGCAGTGAAAGGCTGATCAATGATCTTTTTATTTTGAACCATTCTTAATTCTTGGAATTGTTCGGTTGAGAAACATTTCA

mRNA sequence

ATTGACCAAGTCAACCGGATCCGGGTTTAAGGTCATTGGCTTTTCATCACCGTAAACGTTTTCGCGGGAGGCAAACGCAGTTGCCGCGGCGGTGCTTTTCTGTGCCGTCAAATGTTATGGATGTACTGGAAATGCTGCTCTGAACGACGGCGAATGATGCGGGGTTTTCTCAACAATATGAACAGGTACTTATCGACCTACAGAGTAGCCGCTAATGCCTTCGAGATGTCTGCAAAACATGGCGAATTGAGGGTTTTCATTGTCGCCGGAGAAGTCTCCGGCGACACCATCGCTTCTCGTCTCATGACATCTCTGAGAACGCTATCTCCTGTTCCTGTTCGTTTCTCCGGCGTCGGAGGCTCCATGATGTCCAAGCAAGGATTGAAGTCTCTATTCCCCATGGAGGATATTGCAGTAATGGGAATATGGGAGCTATTTCCGCATCTAATGAAAATTAGAGTGAATTTGTGGATTGCCTGGTTTATATGGAGACTTTGGCAATGCCAGGAAAAGCTCAAGAGGACCGTTGAAGCTGCTATAGTGTTTCAACCTCATGTCGTTGTAACGGTGGACTCTAAAGGGTTCTCGTTCCGCCTCCTAAAGCAGATACGTGCTAGATATCGAAACGATAAATTGGCTTGTCCAGTACATTTCCATTACGTAGCACCGTCATTCTGGGCTTGGAAAGGGGGTGAAGAAAGGCTGAAAGGTCTTGTTGAATTTGTTGACCACATTTTATGCATACTTCCAAATGAAGCAGAAGTTTGTAAATCAAATGGATTGGCAGCGACCTTTGTGGGGCATCCCATTCTCGAGGATACGTTAGACCTCAATGCTGGGAAGGATGCCTCATTACTGGAGTTGAAAATACAGGGAAGTTGCAAAGATTTTCTAATTCAAAACGACATTCGTGCTGATGCAACAATCATTTCCCTGCTTCCTGGAAGTAGGTTACAGGAAGTCAGCAGAATGATTCCAATCTATGCAAGTACGTTGGAGTTACTGAAAGAATCCTTCCCGGAGCTGACAACAATCATCCACGTTGCTCCTAATGCTGATGTACAGGACCATATAAGTGGAGTCCTTCATAAGTGGCCTGTGCCTGCCGTATTGGTCGCAGGAGGATCACCACAAGCAAAATATGATGCATTCAGTGTAAGTCCTTTCAGTCTACTCAATGCAAGTAAGGTTGCATTATGTACTTCTGGTACAGTTGCTACGGAGTTGCAGCTTGCTCGGTTACCTTGTGTGGTTGCTTACCGAGCTCATTTCTTAACCGAATGGTTAATTCGACACAAAGCGAAAGTATCATACATCTCCCTTCCAAATATTCTCTTAAACTCACCTGTTATCCCAGAGGCACTGTTTCAAGAATGCACTCCAGGAAGGCTACAGTCGATGCTCAAGGAATTGATACGTAACGACGGTCTACGCAACAAACAGATTGTCGCGGCCAAAGAGGTTCTTAAACTGCTGTGTCCTTCAAAAGAAAGTACTAAGATCTTAGCACAGGCGGGTTTGAAATGCACATCTTCATCTTCAATCTGCACACCCAGCATGATAGCGGCATCTACCATACTGTACTATGAAAGGACGCAGTAATTGGGTTGGAATCAGCCAATTTTGCAGCAGTGAAAGGCTGATCAATGATCTTTTTATTTTGAACCATTCTTAATTCTTGGAATTGTTCGGTTGAGAAACATTTCA

Coding sequence (CDS)

ATGTTATGGATGTACTGGAAATGCTGCTCTGAACGACGGCGAATGATGCGGGGTTTTCTCAACAATATGAACAGGTACTTATCGACCTACAGAGTAGCCGCTAATGCCTTCGAGATGTCTGCAAAACATGGCGAATTGAGGGTTTTCATTGTCGCCGGAGAAGTCTCCGGCGACACCATCGCTTCTCGTCTCATGACATCTCTGAGAACGCTATCTCCTGTTCCTGTTCGTTTCTCCGGCGTCGGAGGCTCCATGATGTCCAAGCAAGGATTGAAGTCTCTATTCCCCATGGAGGATATTGCAGTAATGGGAATATGGGAGCTATTTCCGCATCTAATGAAAATTAGAGTGAATTTGTGGATTGCCTGGTTTATATGGAGACTTTGGCAATGCCAGGAAAAGCTCAAGAGGACCGTTGAAGCTGCTATAGTGTTTCAACCTCATGTCGTTGTAACGGTGGACTCTAAAGGGTTCTCGTTCCGCCTCCTAAAGCAGATACGTGCTAGATATCGAAACGATAAATTGGCTTGTCCAGTACATTTCCATTACGTAGCACCGTCATTCTGGGCTTGGAAAGGGGGTGAAGAAAGGCTGAAAGGTCTTGTTGAATTTGTTGACCACATTTTATGCATACTTCCAAATGAAGCAGAAGTTTGTAAATCAAATGGATTGGCAGCGACCTTTGTGGGGCATCCCATTCTCGAGGATACGTTAGACCTCAATGCTGGGAAGGATGCCTCATTACTGGAGTTGAAAATACAGGGAAGTTGCAAAGATTTTCTAATTCAAAACGACATTCGTGCTGATGCAACAATCATTTCCCTGCTTCCTGGAAGTAGGTTACAGGAAGTCAGCAGAATGATTCCAATCTATGCAAGTACGTTGGAGTTACTGAAAGAATCCTTCCCGGAGCTGACAACAATCATCCACGTTGCTCCTAATGCTGATGTACAGGACCATATAAGTGGAGTCCTTCATAAGTGGCCTGTGCCTGCCGTATTGGTCGCAGGAGGATCACCACAAGCAAAATATGATGCATTCAGTGTAAGTCCTTTCAGTCTACTCAATGCAAGTAAGGTTGCATTATGTACTTCTGGTACAGTTGCTACGGAGTTGCAGCTTGCTCGGTTACCTTGTGTGGTTGCTTACCGAGCTCATTTCTTAACCGAATGGTTAATTCGACACAAAGCGAAAGTATCATACATCTCCCTTCCAAATATTCTCTTAAACTCACCTGTTATCCCAGAGGCACTGTTTCAAGAATGCACTCCAGGAAGGCTACAGTCGATGCTCAAGGAATTGATACGTAACGACGGTCTACGCAACAAACAGATTGTCGCGGCCAAAGAGGTTCTTAAACTGCTGTGTCCTTCAAAAGAAAGTACTAAGATCTTAGCACAGGCGGGTTTGAAATGCACATCTTCATCTTCAATCTGCACACCCAGCATGATAGCGGCATCTACCATACTGTACTATGAAAGGACGCAGTAA

Protein sequence

MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFIWRLWQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICTPSMIAASTILYYERTQ

Homology

[Close]

BLAST of Carg03456 vs. NCBI nr
Match: XP_022944498.1 (probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita moschata])

HSP 1 Score: 907.1 bits (2343), Expect = 2.6e-260
Identity = 467/496 (94.15%), Postives = 470/496 (94.76%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMYWKCCSERRRMMRGFL+NMNRYLSTYRVAANAFEMSA HGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYWKCCSERRRMMRGFLSNMNRYLSTYRVAANAFEMSANHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR    
Sbjct: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH
Sbjct: 121 ------------EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE
Sbjct: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTPGRLQSMLKELIRNDGLRNKQIVAA+EVLKLLCP KESTKILA+AGLKCTSSSSICT
Sbjct: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAEEVLKLLCP-KESTKILARAGLKCTSSSSICT 471

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILYYERTQ
Sbjct: 481 PSMIAASTILYYERTQ 471

[Close]

BLAST of Carg03456 vs. NCBI nr
Match: XP_023512770.1 (probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 904.8 bits (2337), Expect = 1.3e-259
Identity = 466/496 (93.95%), Postives = 469/496 (94.56%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWEL PHLMKIR    
Sbjct: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELCPHLMKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH
Sbjct: 121 ------------EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE
Sbjct: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPELTTIIHVAPNADVQ+HISGVLHKWPVPAVLVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELTTIIHVAPNADVQEHISGVLHKWPVPAVLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVATELQLARLP VVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVATELQLARLPFVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTP RLQSMLKELIRNDGLRNKQIVAA+EVLKLLCPSKESTKILA+AGLKCTSSSSICT
Sbjct: 421 ECTPRRLQSMLKELIRNDGLRNKQIVAAEEVLKLLCPSKESTKILARAGLKCTSSSSICT 472

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILYYERTQ
Sbjct: 481 PSMIAASTILYYERTQ 472

[Close]

BLAST of Carg03456 vs. NCBI nr
Match: XP_022985960.1 (probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita maxima])

HSP 1 Score: 893.3 bits (2307), Expect = 3.8e-256
Identity = 460/496 (92.74%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMYWK CSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYWKGCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR    
Sbjct: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH
Sbjct: 121 ------------EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTL+L
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLEL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           NAGKDASLLELKIQGSCKDFLI+NDI ADATIISLLPGSRLQEV RMI IYASTLELLKE
Sbjct: 241 NAGKDASLLELKIQGSCKDFLIKNDIPADATIISLLPGSRLQEVCRMISIYASTLELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVATELQLARLPCVVA+RAHFLTEWLI+ KAKVSYISLPNILLNSPVIPEALF 
Sbjct: 361 ALCTSGTVATELQLARLPCVVAFRAHFLTEWLIQRKAKVSYISLPNILLNSPVIPEALFH 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTPGRLQSMLKELIRNDGLRNKQIVAA+EVLKLLCPSKESTKILA+AGLKCTSSSSICT
Sbjct: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAEEVLKLLCPSKESTKILARAGLKCTSSSSICT 472

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILYYERTQ
Sbjct: 481 PSMIAASTILYYERTQ 472

[Close]

BLAST of Carg03456 vs. NCBI nr
Match: XP_022149752.1 (probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 770.4 bits (1988), Expect = 3.7e-219
Identity = 402/496 (81.05%), Postives = 429/496 (86.49%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMY K CSER R+MR FLN+M RY S  R+AANA EM+AKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYGKLCSERWRVMRSFLNDMKRYASNSRIAANAVEMAAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
            SRLMTSLRTLSPVPVRFSGVGG MMSK+GLKSLFPMEDIAVMGIWELFPHL KIR    
Sbjct: 61  GSRLMTSLRTLSPVPVRFSGVGGPMMSKKGLKSLFPMEDIAVMGIWELFPHLKKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       E LK TVEAAI+FQPHVVVTVDSKGFSFRLLKQIRARYR++KL  PVH
Sbjct: 121 ------------ENLKMTVEAAIMFQPHVVVTVDSKGFSFRLLKQIRARYRHEKLDGPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGE+RLKGL+E VDHILCILPNE EVCKSNGLAATFVGHPILEDTL L
Sbjct: 181 FHYVAPSFWAWKGGEKRLKGLIELVDHILCILPNEDEVCKSNGLAATFVGHPILEDTLQL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDASL ELKIQG+CKDFLI+N I ADATIISLLPGSRLQEVSRM+PIYAST+ELLKE
Sbjct: 241 NVGKDASLQELKIQGNCKDFLIRNGIPADATIISLLPGSRLQEVSRMVPIYASTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL T+IHVAPN  VQD+ISGVLHKWPVPA LVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELITVIHVAPNQHVQDYISGVLHKWPVPARLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVA ELQLARLPC+VAYRAH LTEWLIR KA VS+ISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVAMELQLARLPCIVAYRAHLLTEWLIRCKANVSFISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTPGRLQSMLKEL+ +DGLR+KQIVAA++VL+LL PS+ + K LAQ G +CT  S I T
Sbjct: 421 ECTPGRLQSMLKELMHDDGLRDKQIVAAEQVLRLLSPSEGNMKSLAQEGTECT--SPIRT 470

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILY ERTQ
Sbjct: 481 PSMIAASTILYSERTQ 470

[Close]

BLAST of Carg03456 vs. NCBI nr
Match: XP_008456392.1 (PREDICTED: probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 766.9 bits (1979), Expect = 4.1e-218
Identity = 397/494 (80.36%), Postives = 425/494 (86.03%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           M WM WKCC +R+R+M+  LNN  RYLS YRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MSWMNWKCCLQRQRVMQSLLNNTKRYLSNYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGLKSLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLKSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDAS LELKIQGSCK+FLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVGKDAS-LELKIQGSCKEFLIKNNISDDATIISLLPGSRLQEVSRMIPIYISTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SMLKE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICT
Sbjct: 421 DCTPAKLHSMLKEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICT 467

Query: 481 PSMIAASTILYYER 495
           PS+IAAS IL+Y++
Sbjct: 481 PSVIAASAILFYKK 467

[Close]

BLAST of Carg03456 vs. TAIR10
Match: AT2G04560.1 (transferases, transferring glycosyl groups)

HSP 1 Score: 516.9 bits (1330), Expect = 1.4e-146
Identity = 267/477 (55.97%), Postives = 343/477 (71.91%), Query Frame = 0


Query: 20  LNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFS 79
           L+   +  S+++ A +  + +A  GELRVFIV+GEVSGD I SRLM+SL+ LSP+P+RF+
Sbjct: 14  LSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFN 73

Query: 80  GVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTV 139
           GVGGS+M K+GL SLFPMED+AVMG+WEL PHL K RV                KLK T+
Sbjct: 74  GVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRV----------------KLKETI 133

Query: 140 EAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLA-CPVHFHYVAPSFWAWKGGEERL 199
           +AA+ F+PHVVVTVDSKGFSFRLLK++RARY+  +L  C VHFHYVAPSFWAWKGGE RL
Sbjct: 134 DAAVKFKPHVVVTVDSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRL 193

Query: 200 KGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSCK 259
            GL EFVDH+ CILPNE  VC+ +G+ ATFVGHP+LED  + +  +     ELK++G   
Sbjct: 194 GGLSEFVDHLFCILPNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS- 253

Query: 260 DFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADVQ 319
               ++ I +D+T+IS+LPGSRLQEV RM+PI++  ++LLK+ FP+L T+IHVA N  V 
Sbjct: 254 --FSEHSIPSDSTVISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVD 313

Query: 320 DHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARLP 379
            +I     +WPVPA+LV  GS Q KYDAF         AS+ ALCTSGTVA ELQLA LP
Sbjct: 314 HYIGESFSEWPVPAILVPSGSTQLKYDAF--------GASQAALCTSGTVAVELQLAHLP 373

Query: 380 CVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRND 439
            +VAYRAHFLTE LIR+KAK+ YISLPNILL+SP+IPEALFQ C P  L S+L+ L+ ++
Sbjct: 374 SLVAYRAHFLTELLIRYKAKIPYISLPNILLDSPIIPEALFQACNPSNLASILERLLLDE 433

Query: 440 GLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTS-SSSICTPSMIAASTILYYER 495
            +R +Q+V A+++++LL PS+          + CT   S   TPS++AASTIL Y R
Sbjct: 434 KMRERQVVGAEKLIQLLHPSESR----MGNSIHCTGLESHRYTPSILAASTILSYAR 459

[Close]

BLAST of Carg03456 vs. Swiss-Prot
Match: sp|F4IF99|LPXB_ARATH (Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LPXB PE=2 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.4e-145
Identity = 267/477 (55.97%), Postives = 343/477 (71.91%), Query Frame = 0


Query: 20  LNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFS 79
           L+   +  S+++ A +  + +A  GELRVFIV+GEVSGD I SRLM+SL+ LSP+P+RF+
Sbjct: 14  LSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFN 73

Query: 80  GVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTV 139
           GVGGS+M K+GL SLFPMED+AVMG+WEL PHL K RV                KLK T+
Sbjct: 74  GVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRV----------------KLKETI 133

Query: 140 EAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLA-CPVHFHYVAPSFWAWKGGEERL 199
           +AA+ F+PHVVVTVDSKGFSFRLLK++RARY+  +L  C VHFHYVAPSFWAWKGGE RL
Sbjct: 134 DAAVKFKPHVVVTVDSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRL 193

Query: 200 KGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSCK 259
            GL EFVDH+ CILPNE  VC+ +G+ ATFVGHP+LED  + +  +     ELK++G   
Sbjct: 194 GGLSEFVDHLFCILPNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS- 253

Query: 260 DFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADVQ 319
               ++ I +D+T+IS+LPGSRLQEV RM+PI++  ++LLK+ FP+L T+IHVA N  V 
Sbjct: 254 --FSEHSIPSDSTVISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVD 313

Query: 320 DHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARLP 379
            +I     +WPVPA+LV  GS Q KYDAF         AS+ ALCTSGTVA ELQLA LP
Sbjct: 314 HYIGESFSEWPVPAILVPSGSTQLKYDAF--------GASQAALCTSGTVAVELQLAHLP 373

Query: 380 CVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRND 439
            +VAYRAHFLTE LIR+KAK+ YISLPNILL+SP+IPEALFQ C P  L S+L+ L+ ++
Sbjct: 374 SLVAYRAHFLTELLIRYKAKIPYISLPNILLDSPIIPEALFQACNPSNLASILERLLLDE 433

Query: 440 GLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTS-SSSICTPSMIAASTILYYER 495
            +R +Q+V A+++++LL PS+          + CT   S   TPS++AASTIL Y R
Sbjct: 434 KMRERQVVGAEKLIQLLHPSESR----MGNSIHCTGLESHRYTPSILAASTILSYAR 459

[Close]

BLAST of Carg03456 vs. Swiss-Prot
Match: sp|B6IST7|LPXB_RHOCS (Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=lpxB PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.8e-71
Identity = 156/410 (38.05%), Postives = 234/410 (57.07%), Query Frame = 0


Query: 46  LRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGI 105
           L +F++AGE SGD +  RLM +LR      V F+GVGG  M++QGL+SLFPMED+A+ G+
Sbjct: 4   LLIFLIAGEPSGDVLGGRLMAALREAMEGHVEFAGVGGPRMAEQGLQSLFPMEDLALFGL 63

Query: 106 WELFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQ 165
            EL P L  +                 ++L +T +A +   P  VV++D+  F FR    
Sbjct: 64  AELLPRLPTL----------------LKRLDQTTKAVLERTPDAVVSIDAPDFCFR---- 123

Query: 166 IRARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLA 225
           +  R R      P+  HYVAP+ WAW+ G  R + + +F+DH+L +LP E    ++ GL 
Sbjct: 124 VEQRLRRAGARMPL-IHYVAPTVWAWRPG--RARKVAKFLDHLLALLPFEPPYFEAVGLP 183

Query: 226 ATFVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVS 285
            TFVGHP++E      +G DA        G  + F  ++ I  DAT++++LPGSR  EV+
Sbjct: 184 CTFVGHPVVE------SGADA--------GDGERFRRRHGIAPDATVLTVLPGSRRSEVT 243

Query: 286 RMIPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYD 345
           +++P + +TLE+L   +P+L  ++   P   V + ++  +  WPVPA+ + G +   KYD
Sbjct: 244 KLLPDFGATLEILASRYPDLQVVVPTVPG--VAETVAEAVQSWPVPAITLLGDAD--KYD 303

Query: 346 AFSVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLP 405
           AF+        AS  AL  SGTVA EL LAR+P V+AYR H ++  L R   +V Y++L 
Sbjct: 304 AFA--------ASTAALAASGTVALELALARVPAVIAYRIHPVSHALYRRFIRVRYVNLV 363

Query: 406 NILLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLL 456
           NI+L+ P++PE L Q+CTP RL   +  L+     R +QI    EV + L
Sbjct: 364 NIMLDRPLVPELLQQDCTPDRLALAVDRLLNEPSARQEQIDGVTEVARWL 364

[Close]

BLAST of Carg03456 vs. Swiss-Prot
Match: sp|Q5FUA3|LPXB_GLUOX (Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=lpxB PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-57
Identity = 139/410 (33.90%), Postives = 217/410 (52.93%), Query Frame = 0


Query: 48  VFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWE 107
           ++I+AGE SGD I +RLM +L    P  V F+GVGG  M   GL SLFPM D+AVMG+ E
Sbjct: 31  IWILAGEASGDVIGARLMQALHAQDPSLV-FAGVGGGRMEALGLHSLFPMSDLAVMGLVE 90

Query: 108 LFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIR 167
           + P L                 Q  ++L   V+   + +P +VVT+DS GF+ RLL++I 
Sbjct: 91  VVPRL----------------RQLSQRLLEAVQDIELRKPDLVVTIDSPGFTLRLLQKI- 150

Query: 168 ARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAAT 227
                 + +     HYVAP  WAW+  E R+K      D +LC+LP E +     GL   
Sbjct: 151 ------ERSGIKRVHYVAPQVWAWR--ENRVKEFPGLWDRLLCLLPFEPDWFAQRGLEGR 210

Query: 228 FVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRM 287
           FVGHP+L+  +               QG+ + F ++++I A A ++ L+PGSR  E  R+
Sbjct: 211 FVGHPVLQSGVR--------------QGNAQRFRLRHNIPAHAPVVILMPGSRRSEAPRL 270

Query: 288 IPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAF 347
           +P++   L++L+  +P++  +I VAP   +   I  ++ KWP+   +V       K+DAF
Sbjct: 271 LPVFRKMLDILRVQYPDICPVIPVAP--VIAPTIRQLIRKWPIQPHIVT--DIHDKHDAF 330

Query: 348 SVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNI 407
           +        A++ AL  SGT   EL +  +P  V YR + +T  + R   KV ++++ N+
Sbjct: 331 A--------AAQCALTKSGTSTLELAMGNVPMAVTYRVNPVTATIARRLIKVPHVAMVNL 388

Query: 408 LLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCP 458
           L    V+PE L + CTP +L   + +L+ +  +  KQ +A  +VL  L P
Sbjct: 391 LAGREVVPELLQENCTPKKLAETVSKLLSDPQMVEKQRMAFADVLDKLSP 388

[Close]

BLAST of Carg03456 vs. Swiss-Prot
Match: sp|Q0BS63|LPXB_GRABC (Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=lpxB PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.6e-57
Identity = 142/445 (31.91%), Postives = 228/445 (51.24%), Query Frame = 0


Query: 48  VFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWE 107
           ++IVAGE SGD + +RL+ +LR ++P  +RF+G+GG  M + G +SLFPM ++AVMG+ E
Sbjct: 6   IYIVAGEHSGDVLGARLIHALRAINP-SIRFAGIGGPRMEECGFQSLFPMHELAVMGLIE 65

Query: 108 LFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIR 167
           + P ++K+R                 +L++TV+     +P +V+T+DS GF  RLL+ I+
Sbjct: 66  ILPRVLKLR----------------RRLQQTVQDIETRRPDLVLTIDSPGFCLRLLRAIQ 125

Query: 168 ARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAAT 227
                         HYVAP  WAW+  E R+K      + +LC+LP E +      +   
Sbjct: 126 PFGIK-------RVHYVAPQVWAWR--EHRVKRFPGLWERMLCLLPFEEKWFAERNVPGQ 185

Query: 228 FVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRM 287
           FVGHP+LE   D              QG    F  ++ +  +A +I L+PGSR  E  R+
Sbjct: 186 FVGHPVLESGAD--------------QGDAARFRARHSLADNARVIVLMPGSRANEAGRL 245

Query: 288 IPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAF 347
           +P+Y  TL LL ++ P +T +I +A  +     + G +  WPV  + +   +   K+DAF
Sbjct: 246 LPVYGETLRLLMQNIPTITPVIPLA--SSTAHTVRGAVSSWPVQPIFITDIAD--KHDAF 305

Query: 348 SVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNI 407
           +        A++ AL  SGT   EL +  +P  V YR + +T  + R   +V Y+++ N+
Sbjct: 306 A--------AAEAALTKSGTSTLELAMGGVPMAVTYRVNRITAMMARRLIRVPYVAMVNL 365

Query: 408 LLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVA--AKEVLKLLCPSKESTKIL 467
           L    ++PE L + CTP ++ ++L  L+ N    N    A   K+ LK +  S  +    
Sbjct: 366 LAGREIVPELLQENCTPTKIAAVLTSLMNNAPDTNGMGAADSQKQALKAVVASLHAPNRH 388

Query: 468 AQAGLKCTSSSSICTPSMIAASTIL 491
           A  GL          PS  AA++I+
Sbjct: 426 ASDGL----------PSSAAAASIM 388

[Close]

BLAST of Carg03456 vs. Swiss-Prot
Match: sp|Q2W4D7|LPXB_MAGSA (Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=lpxB PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.8e-55
Identity = 134/417 (32.13%), Postives = 214/417 (51.32%), Query Frame = 0


Query: 48  VFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWE 107
           ++++AGE SGD +  RLM +L+      V F+G+GG  M  +GL SLFPM +++VMG+ E
Sbjct: 3   IYLIAGEPSGDLLGGRLMAALKERLGEGVSFAGIGGESMRAEGLTSLFPMTELSVMGLVE 62

Query: 108 LFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIR 167
           + P + KI                  ++K+T+      +P  +VT+DS GF+ R+   ++
Sbjct: 63  VLPRIPKI----------------LRRVKQTISDIETKRPDALVTIDSWGFNGRIQAGLK 122

Query: 168 ARYRNDKLACPV-HFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAA 227
           AR        PV   HYVAP  WAWK G  R K L   +D +L +LPNE E  +  GL  
Sbjct: 123 AR------GVPVPRIHYVAPMVWAWKSG--RTKTLARVLDLLLTLLPNEPEWFEKEGLKT 182

Query: 228 TFVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSR 287
             VGHP++E                  +G    F +++    D  ++ +LPGSR  E ++
Sbjct: 183 LHVGHPVIEGAAS--------------RGDGAAFRVRHGFAPDRKLLCVLPGSRHSETAK 242

Query: 288 MIPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDA 347
           ++  +  T+ LL   FP+L  ++       V D +S  +  W +P+++V G     KYDA
Sbjct: 243 LLAPFGETIALLARRFPDLAVVVPTVET--VADEVSQAVKSWALPSMVVRG---PEKYDA 302

Query: 348 FSVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVS--YISL 407
           F+        A   AL  SGTVA EL +ARLP V+ Y+   ++ ++      +S  +++L
Sbjct: 303 FA--------ACDAALAASGTVALELAMARLPAVITYKVSPVSAFIATRFLGLSLKFVTL 362

Query: 408 PNILLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKES 462
            NIL++  V+PE L  +C P +L + ++ L+ ++  R  Q   A+  L+ L    ES
Sbjct: 363 VNILVDEAVMPELLQDDCRPDKLAAAVEHLLTDEAARALQAAGARRALEKLGLGGES 368

[Close]

BLAST of Carg03456 vs. TrEMBL
Match: tr|A0A1S3C4E2|A0A1S3C4E2_CUCME (probable lipid-A-disaccharide synthase, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496344 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 2.7e-218
Identity = 397/494 (80.36%), Postives = 425/494 (86.03%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           M WM WKCC +R+R+M+  LNN  RYLS YRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MSWMNWKCCLQRQRVMQSLLNNTKRYLSNYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGLKSLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLKSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDAS LELKIQGSCK+FLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVGKDAS-LELKIQGSCKEFLIKNNISDDATIISLLPGSRLQEVSRMIPIYISTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SMLKE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICT
Sbjct: 421 DCTPAKLHSMLKEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICT 467

Query: 481 PSMIAASTILYYER 495
           PS+IAAS IL+Y++
Sbjct: 481 PSVIAASAILFYKK 467

[Close]

BLAST of Carg03456 vs. TrEMBL
Match: tr|A0A0A0KBH7|A0A0A0KBH7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168270 PE=4 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 1.0e-217
Identity = 396/495 (80.00%), Postives = 424/495 (85.66%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWM  KCC + +R+M+  LNN  RY S YRVAANAFEM+AKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMNCKCCLQPQRVMQSLLNNTRRYFSYYRVAANAFEMAAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGL SLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLTSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRYKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDASL+ELKI+GSCKDFLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVGKDASLIELKIRGSCKDFLIKNNISDDATIISLLPGSRLQEVSRMIPIYLSTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KA VSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKANVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SM+KELI N+GLRNKQ+VAAKEVLKLL  SK++ K LA+ GLKCT  SS+CT
Sbjct: 421 DCTPAKLHSMIKELICNNGLRNKQVVAAKEVLKLLSSSKDNMKFLAKEGLKCT--SSMCT 469

Query: 481 PSMIAASTILYYERT 496
           PSMIAAS IL+Y+RT
Sbjct: 481 PSMIAASAILFYKRT 469

[Close]

BLAST of Carg03456 vs. TrEMBL
Match: tr|A0A1S3C378|A0A1S3C378_CUCME (probable lipid-A-disaccharide synthase, mitochondrial isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496344 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 1.7e-207
Identity = 384/494 (77.73%), Postives = 414/494 (83.81%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           M WM WKCC +R+R+M+  LNN  RYLS YRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MSWMNWKCCLQRQRVMQSLLNNTKRYLSNYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGLKSLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLKSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N  +     ELKIQG+     ++N +  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVVRLNP--ELKIQGTRH---LRNFVFEDATIISLLPGSRLQEVSRMIPIYISTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SMLKE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICT
Sbjct: 421 DCTPAKLHSMLKEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICT 463

Query: 481 PSMIAASTILYYER 495
           PS+IAAS IL+Y++
Sbjct: 481 PSVIAASAILFYKK 463

[Close]

BLAST of Carg03456 vs. TrEMBL
Match: tr|A0A2N9FMH6|A0A2N9FMH6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15973 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.6e-168
Identity = 311/475 (65.47%), Postives = 368/475 (77.47%), Query Frame = 0


Query: 18  GFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVR 77
           G  + + RY+S    A    +M+AK GELRVFIV+GEVSGD+I SRLM SL+ L PVP+ 
Sbjct: 16  GVSSLLRRYISVSGRA--VMDMAAKDGELRVFIVSGEVSGDSIGSRLMASLKKLCPVPIH 75

Query: 78  FSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFXXXXXQCQEKLKR 137
           FSGVGGSMMS+QGLKSLFPMEDIAVMGIWEL PHL KIR+                KLK 
Sbjct: 76  FSGVGGSMMSRQGLKSLFPMEDIAVMGIWELLPHLNKIRL----------------KLKE 135

Query: 138 TVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVHFHYVAPSFWAWKGGEER 197
           T+EAA +FQPHVVVTVDSKGFSFRLLKQ+RA+Y    L  PVHFHYVAPSFWAWKGGE R
Sbjct: 136 TIEAAFLFQPHVVVTVDSKGFSFRLLKQLRAKYSQQGLDGPVHFHYVAPSFWAWKGGEAR 195

Query: 198 LKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSC 257
           LKGL EFVD +LCILPNE EVCKSNGLAATFVGHP++ED L+LN GKD S  E K++   
Sbjct: 196 LKGLTEFVDQVLCILPNEEEVCKSNGLAATFVGHPVMEDLLELNLGKDTSPHERKVERVF 255

Query: 258 KDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADV 317
           +DF  +N I A AT+ISLLPGSRLQEV++M+ I+++T+ELLK+SFPEL ++IHVAPN  V
Sbjct: 256 EDFRSKNAIPAGATVISLLPGSRLQEVTKMLSIFSNTMELLKDSFPELMSVIHVAPNHHV 315

Query: 318 QDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARL 377
           + +I+G++HKWPVPAVL+ GG PQ KYDAFS        AS+VALCTSGTVA E+QLARL
Sbjct: 316 EKYITGIVHKWPVPAVLIPGGLPQLKYDAFS--------ASRVALCTSGTVALEMQLARL 375

Query: 378 PCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRN 437
           PCVVAYRAH LTEW I +KAK+SYISLPNILL+S +IPEALFQ CTP +L S+L ELI N
Sbjct: 376 PCVVAYRAHLLTEWFIHYKAKISYISLPNILLDSAIIPEALFQACTPTKLTSLLMELIHN 435

Query: 438 DGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICTPSMIAASTILYY 493
           +GLR +QIVAA++V++LL PS+ +     Q   +        TPSMIAASTILYY
Sbjct: 436 EGLREEQIVAAEKVIRLLYPSERNINSFLQQDSRLRFPD--LTPSMIAASTILYY 462

[Close]

BLAST of Carg03456 vs. TrEMBL
Match: tr|A0A1S3C2Q1|A0A1S3C2Q1_CUCME (probable lipid-A-disaccharide synthase, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496344 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.3e-164
Identity = 300/363 (82.64%), Postives = 325/363 (89.53%), Query Frame = 0


Query: 132 QEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVHFHYVAPSFWAW 191
           +EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+HFHYVAPSFWAW
Sbjct: 45  KEKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLHFHYVAPSFWAW 104

Query: 192 KGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLEL 251
           KGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDLN GKDAS LEL
Sbjct: 105 KGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDLNVGKDAS-LEL 164

Query: 252 KIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHV 311
           KIQGSCK+FLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKESFPEL TIIHV
Sbjct: 165 KIQGSCKEFLIKNNISDDATIISLLPGSRLQEVSRMIPIYISTMELLKESFPELITIIHV 224

Query: 312 APNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATE 371
           APN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKVALCTSGTV TE
Sbjct: 225 APNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKVALCTSGTVVTE 284

Query: 372 LQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSML 431
           LQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ+CTP +L SML
Sbjct: 285 LQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQDCTPAKLHSML 344

Query: 432 KELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICTPSMIAASTILY 491
           KE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICTPS+IAAS IL+
Sbjct: 345 KEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICTPSVIAASAILF 396

Query: 492 YER 495
           Y++
Sbjct: 405 YKK 396

The following BLAST results are available for this feature:

BLAST of Carg03456 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944498.1	2.6e-260	94.15	probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita moschata]	[more]
XP_023512770.1	1.3e-259	93.95	probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cucurbita pepo...	[more]
XP_022985960.1	3.8e-256	92.74	probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita maxima]	[more]
XP_022149752.1	3.7e-219	81.05	probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Momordica char...	[more]
XP_008456392.1	4.1e-218	80.36	PREDICTED: probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cuc...	[more]

BLAST of Carg03456 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04560.1	1.4e-146	55.97	transferases, transferring glycosyl groups	[more]

BLAST of Carg03456 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4IF99\|LPXB_ARATH	2.4e-145	55.97	Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana OX...	[more]
sp\|B6IST7\|LPXB_RHOCS	6.8e-71	38.05	Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW...	[more]
sp\|Q5FUA3\|LPXB_GLUOX	1.5e-57	33.90	Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain 621H) OX=290633 G...	[more]
sp\|Q0BS63\|LPXB_GRABC	5.6e-57	31.91	Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-126...	[more]
sp\|Q2W4D7\|LPXB_MAGSA	6.8e-55	32.13	Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATC...	[more]

BLAST of Carg03456 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4E2\|A0A1S3C4E2_CUCME	2.7e-218	80.36	probable lipid-A-disaccharide synthase, mitochondrial isoform X1 OS=Cucumis melo...	[more]
tr\|A0A0A0KBH7\|A0A0A0KBH7_CUCSA	1.0e-217	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168270 PE=4 SV=1	[more]
tr\|A0A1S3C378\|A0A1S3C378_CUCME	1.7e-207	77.73	probable lipid-A-disaccharide synthase, mitochondrial isoform X3 OS=Cucumis melo...	[more]
tr\|A0A2N9FMH6\|A0A2N9FMH6_FAGSY	2.6e-168	65.47	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15973 PE=4 SV=1	[more]
tr\|A0A1S3C2Q1\|A0A1S3C2Q1_CUCME	1.3e-164	82.64	probable lipid-A-disaccharide synthase, mitochondrial isoform X2 OS=Cucumis melo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009245	lipid A biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008915	lipid-A-disaccharide synthase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003835	Glyco_trans_19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009245	lipid A biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008915	lipid-A-disaccharide synthase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03456-RA	Carg03456-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003835	Glycosyl transferase, family 19	PFAM	PF02684	LpxB	coord: 48..462 e-value: 2.5E-68 score: 230.5
IPR003835	Glycosyl transferase, family 19	PANTHER	PTHR30372	LIPID-A-DISACCHARIDE SYNTHASE	coord: 36..464
None	No IPR available	PANTHER	PTHR30372:SF3	LIPID-A-DISACCHARIDE SYNTHASE, MITOCHONDRIAL-RELATED	coord: 36..464
None	No IPR available	SUPERFAMILY	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 47..450

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03456	Cla013507	Watermelon (97103) v1	carwmB0330
Carg03456	Csa6G168270	Cucumber (Chinese Long) v2	carcuB0373
Carg03456	MELO3C019719	Melon (DHL92) v3.5.1	carmeB0339
Carg03456	ClCG02G018170	Watermelon (Charleston Gray)	carwcgB0327
Carg03456	CSPI06G13120	Wild cucumber (PI 183967)	carcpiB0376
Carg03456	Cucsa.139770	Cucumber (Gy14) v1	carcgyB0394
Carg03456	CmaCh20G002420	Cucurbita maxima (Rimu)	carcmaB0473
Carg03456	CmoCh20G002620	Cucurbita moschata (Rifu)	carcmoB0464
Carg03456	Lsi10G015600	Bottle gourd (USVL1VR-Ls)	carlsiB303
Carg03456	Cp4.1LG16g07450	Cucurbita pepo (Zucchini)	carcpeB0465
Carg03456	CsGy6G013170	Cucumber (Gy14) v2	carcgybB0353
Carg03456	MELO3C019719.2	Melon (DHL92) v3.6.1	carmedB0347
Carg03456	CsaV3_6G015560	Cucumber (Chinese Long) v3	carcucB0377
Carg03456	Cla97C02G043990	Watermelon (97103) v2	carwmbB0346
Carg03456	Bhi10G000793	Wax gourd	carwgoB0419

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03456	Wax gourd	carwgoB0417
Carg03456	Silver-seed gourd	carcarB030
Carg03456	Silver-seed gourd	carcarB352
Carg03456	Silver-seed gourd	carcarB358
Carg03456	Cucurbita maxima (Rimu)	carcmaB0466
Carg03456	Cucurbita maxima (Rimu)	carcmaB0471
Carg03456	Cucurbita maxima (Rimu)	carcmaB0475
Carg03456	Cucurbita moschata (Rifu)	carcmoB0457
Carg03456	Cucurbita moschata (Rifu)	carcmoB0463
Carg03456	Cucurbita moschata (Rifu)	carcmoB0466
Carg03456	Cucurbita pepo (Zucchini)	carcpeB0464
Carg03456	Cucurbita pepo (Zucchini)	carcpeB0474
Carg03456	Cucurbita pepo (Zucchini)	carcpeB0479
Carg03456	Bottle gourd (USVL1VR-Ls)	carlsiB306