Carg03456-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03456-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Lipid-A-disaccharide synthase
Location	Cucurbita_argyrosperma_scaffold_005 : 1982409 .. 1986630 (-)
Sequence length	1707

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACCAAGTCAACCGGATCCGGGTTTAAGGTCATTGGCTTTTCATCACCGTAAACGTTTTCGCGGGAGGCAAACGCAGTTGCCGCGGCGGTGCTTTTCTGTGCCGTCAAATGTTATGGATGTACTGGAAATGCTGCTCTGAACGACGGCGAATGATGCGGGGTTTTCTCAACAATATGAACAGGTACTTATCGACCTACAGAGTAGCCGCTAATGCCTTCGAGATGTCTGCAAAACATGGCGAATTGAGGGTTTTCATTGTCGCCGGAGAAGTCTCCGGCGACACCATCGCTTCTCGTCTCATGACATCTCTGAGAACGCTATCTCCTGTTCCTGTTCGTTTCTCCGGCGTCGGAGGGTAAGCTGTTACTTTTTTGAAGTGTCCGAATCGCCTGTTCAAAGGGACATATTTCTGTTTATGGCTGAACCGACAAGCTATAGTCTAAGATTTCTGCCATTTTGGTCTCTTCCGTGTTTTGAATACTGTCGGTTGTATGTTAACTTTCATTGATTTCGTTTCAGTGATAGTCTGTTTCTTTAACTACCATTGAAATTTCACATGTTTTGTTACAGCTCCATGATGTCCAAGCAAGGATTGAAGTCTCTATTCCCCATGGAGGATATTGCAGTAATGGGAATATGGGAGCTATTTCCGCATCTAATGAAAATTAGAGTGAGTAGTTCAAAACATAATATACTGGTGTTCTACTGTTTCTCTTTTTAATGCAAGAGAAGAACAGAACCTTCCTCATAGTCATATGATACAACTGTTTGACAAGAAACGAGCTTCCCATCAAAGAATGAAGAACACAAAAGTAAAAAGGGGAAGTAAGTTAAAAAGAATTATGAAAAAGCCACTTCAATTGATATTTTCATCATAAGAATCATGGAATTATGAAAGAGCTTGGAGATAACACACCCAGTAGTCCCAAGAATTGGACGAGATTCCAAAATCCACAATGGTTCGATGTGTCCCCTAAGCAACTATCTGTTCATGTTAGTAATGATAATGACTACTTTTTTATCTGTAAGATTGGTGTTATATGAATGTGATTTCCTCCGTGTCATGAGATTTGTGGATTGCCTGGTTTATATGGAGACTTTGGCAATGCCAGGAAAAGCTCAAGAGGACCGTTGAAGCTGCTATAGTGTTTCAACCTCATGTCGTTGTAACGGTGGACTCTAAAGGGTTCTCGTTCCGCCTCCTAAAGCAGATACGTGGTAATTTGCACCAGCATCTCATGGACTATTGAGTTTTGTTACTTGCTTATACAATTAAAACCACATGTGAACACTGAGGTGGTTTTGCAGCTAGATATCGAAACGATAAATTGGCTTGTCCAGTACATTTCCATTACGTAGCACCGTCATTCTGGGCTTGGAAAGGGGGTGAAGAAAGGCTGAAAGGTCTTGTTGAATTTGTTGACCACATTTTATGCATACTTCCAAATGAAGCAGAAGTTTGTAAATCAAATGGATTGGCAGCGACCTTTGTGGGGCATCCCATTCTCGAGGATACGTTAGACCTCAATGCTGTAAGATATGTCTTATTCCTGATTAATGCAGTGTATAAATTCATCATCTTTGAATTAAATTCATGAAAAAGTGGGCTGCATTCATTGTCGTTTATCTTACTCTAGTTGACTCAGTTTAATGCAGCCACACTAATGCCCTGTGATTTTATGTAGGGGAAGGATGCCTCATTACTGGAGTTGAAAATACAGGGAAGTTGCAAAGATTTTCTAATTCAAAACGACATTCGTGCTGGTAATACGCCTCGCCTAAACTTTCCTTGAATGTAGATTTCTACTTGGCAGTATCTGTGTATTGAACACTTTTCTCATTTTATGAACCATGACAAGCTTTCAGTCTCATGATATCCAATCATTAGTATTTTTCAAATATTTTGAACATAGATTCCTTGAGCAAAACCTTATAAAGGTGTTACTCGTTTTGTAACGCTATTTTGTCTTTTTATGTAAAAATGATTTTGAGCAAAGTTTAGGTATTTGTTAAAAGAAAAAAGAAGCTTAAATCTGGATTTTGTATTGAATCAGTTAAAAATCCTTAGTGAGACATTTGAGGGAATTTTGTTTTTGAAGATGCAACAATCATTTCCCTGCTTCCTGGAAGTAGGTTACAGGAAGTCAGCAGAATGATTCCAATCTATGCAAGTACGTTGGAGTTACTGAAAGAATCCTTCCCGGAGCTGACAACAATCATCCACGTTGCTCCTAATGCTGATGTACAGGACCATATAAGTGGAGTCCTTCATAAGTGGCCTGTGCCTGCCGTATTGGTCGCAGGAGGATCACCACAAGCAAAATATGATGCATTCAGTGTAAGTCCTTTCAGTCTACTCAATGTAACTAACATTAAAGAAAATTATTGGTTTTTCTTCTAGTATACAAGGCACCGAAAATGAGACCGAGTGGAAAGAAAGGGGGAAGTTAAGTTACAGAAATGGTAGTCGTGGACTGGTACCGCAGTACTTCCTACTTACTTTTGGTAATCCTTATTGTGATCTCTTACTCTGGGCTAAGATAGTCTCTTAAGTGCTTACTGTAATAGCCCAAGCTCACCACTAGCAGATATTGTCCGCTTTTGCCCGTTACGTATGGCCATCGGCCTCGTGGTTTTAAAACGCGTCTACTAGAGAGAGGTTTCTACACCCTTATAAGAAAGGTTTTGTTCTCCTTTTCACAATCGATGTGGGATCTCATAATCCACCTCCCTTGGGACCCCGGCGTTCTCGCTGACACACCGCCCAGTGTCTGGCTCTGATACCATTTGTAATAGCTCAAGCTCACTGCTAGCAAATATTGTCCACTTTGGCCCGTTATGTATCACCGTCAGCCTCATAGTTTTAGCGTCTACTGGGGAGAGGTTTCCACACCTGTATAAGAAAGGTTTTGTTCCCCTCTCCAACCAAGGTGAGATCTCACAACAACAGTTCCCATTTGTAACTCCTATGGTTGAAAATTTGAACCCCGATTCTTGGACATAGTGATTATGACACCCATGCAATACCTCATGCATTCTAGGAGATAAAATTGTTTCAGGTTTGCTGTCACTACTACGTGGTAGTGTCTTGCCTTGAGCCTTGTGAAAGTCGAAAGGTCAAATGATTTTGAGGTAATGAAGTAAAATAGTTGTAAGAACTGGACCTTGAGAATATCCACGCCTGTACCCAGCAGCTACCGTAACCTGCAGACTTTTCTTTTTCCAAGCTCCTAATGCATAGATTTTTTAGCCGACTAACTATTGCTGCTATTAAAATCGTAGATGGAAATTAAGTTCCTTTGATTGAAATGAGTCTCCATTCACGTTTATGTTTGTAGCAGGATTTTACTTCCTTTCTTCTTCCTTGTTATTTGATTTGATTATTTACTTTTCTGAACTATGAGGGCACGGCATGTATTTGGCTTAGTACTGTTACTCATAATGCCAGAACTTAACCACTCAAGCACTAATGAGATTGTTTTGCTTTGGAAGCTGTGACTCGTCAATAGGATGCAATCCTAATCTGAACTTTACATGCCTTGCAGGCAAGTAAGGTTGCATTATGTACTTCTGGTACAGTTGCTACGGAGTTGCAGCTTGCTCGGTTACCTTGTGTGGTTGCTTACCGAGCTCATTTCTTAACCGAATGGTTAATTCGACACAAAGCGAAAGTATCATACATCTCCCTTCCAAATATTCTCTTAAACTCACCTGTTATCCCAGAGGCACTGTTTCAAGAATGCACTCCAGGAAGGCTACAGTCGATGCTCAAGTAACATGATTTTGCATTTTTCATTGCAAACTATCTTTTCCATTAAAGCACAAACATTATCTCATCATCTTAGCAGACACCATAGGCTTGTATTTGGACTGGATATAACTACATATTGCTTGAATTGGTCCGTTTATCATTGCAGGGAATTGATACGTAACGACGGTCTACGCAACAAACAGATTGTCGCGGCCAAAGAGGTTCTTAAACTGCTGTGTCCTTCAAAAGAAAGTACTAAGATCTTAGCACAGGCGGGTTTGAAATGCACATCTTCATCTTCAATCTGCACACCCAGCATGATAGCGGCATCTACCATACTGTACTATGAAAGGACGCAGTAATTGGGTTGGAATCAGCCAATTTTGCAGCAGTGAAAGGCTGATCAATGATCTTTTTATTTTGAACCATTCTTAATTCTTGGAATTGTTCGGTTGAGAAACATTTCA

mRNA sequence

ATTGACCAAGTCAACCGGATCCGGGTTTAAGGTCATTGGCTTTTCATCACCGTAAACGTTTTCGCGGGAGGCAAACGCAGTTGCCGCGGCGGTGCTTTTCTGTGCCGTCAAATGTTATGGATGTACTGGAAATGCTGCTCTGAACGACGGCGAATGATGCGGGGTTTTCTCAACAATATGAACAGGTACTTATCGACCTACAGAGTAGCCGCTAATGCCTTCGAGATGTCTGCAAAACATGGCGAATTGAGGGTTTTCATTGTCGCCGGAGAAGTCTCCGGCGACACCATCGCTTCTCGTCTCATGACATCTCTGAGAACGCTATCTCCTGTTCCTGTTCGTTTCTCCGGCGTCGGAGGCTCCATGATGTCCAAGCAAGGATTGAAGTCTCTATTCCCCATGGAGGATATTGCAGTAATGGGAATATGGGAGCTATTTCCGCATCTAATGAAAATTAGAGTGAATTTGTGGATTGCCTGGTTTATATGGAGACTTTGGCAATGCCAGGAAAAGCTCAAGAGGACCGTTGAAGCTGCTATAGTGTTTCAACCTCATGTCGTTGTAACGGTGGACTCTAAAGGGTTCTCGTTCCGCCTCCTAAAGCAGATACGTGCTAGATATCGAAACGATAAATTGGCTTGTCCAGTACATTTCCATTACGTAGCACCGTCATTCTGGGCTTGGAAAGGGGGTGAAGAAAGGCTGAAAGGTCTTGTTGAATTTGTTGACCACATTTTATGCATACTTCCAAATGAAGCAGAAGTTTGTAAATCAAATGGATTGGCAGCGACCTTTGTGGGGCATCCCATTCTCGAGGATACGTTAGACCTCAATGCTGGGAAGGATGCCTCATTACTGGAGTTGAAAATACAGGGAAGTTGCAAAGATTTTCTAATTCAAAACGACATTCGTGCTGATGCAACAATCATTTCCCTGCTTCCTGGAAGTAGGTTACAGGAAGTCAGCAGAATGATTCCAATCTATGCAAGTACGTTGGAGTTACTGAAAGAATCCTTCCCGGAGCTGACAACAATCATCCACGTTGCTCCTAATGCTGATGTACAGGACCATATAAGTGGAGTCCTTCATAAGTGGCCTGTGCCTGCCGTATTGGTCGCAGGAGGATCACCACAAGCAAAATATGATGCATTCAGTGTAAGTCCTTTCAGTCTACTCAATGCAAGTAAGGTTGCATTATGTACTTCTGGTACAGTTGCTACGGAGTTGCAGCTTGCTCGGTTACCTTGTGTGGTTGCTTACCGAGCTCATTTCTTAACCGAATGGTTAATTCGACACAAAGCGAAAGTATCATACATCTCCCTTCCAAATATTCTCTTAAACTCACCTGTTATCCCAGAGGCACTGTTTCAAGAATGCACTCCAGGAAGGCTACAGTCGATGCTCAAGGAATTGATACGTAACGACGGTCTACGCAACAAACAGATTGTCGCGGCCAAAGAGGTTCTTAAACTGCTGTGTCCTTCAAAAGAAAGTACTAAGATCTTAGCACAGGCGGGTTTGAAATGCACATCTTCATCTTCAATCTGCACACCCAGCATGATAGCGGCATCTACCATACTGTACTATGAAAGGACGCAGTAATTGGGTTGGAATCAGCCAATTTTGCAGCAGTGAAAGGCTGATCAATGATCTTTTTATTTTGAACCATTCTTAATTCTTGGAATTGTTCGGTTGAGAAACATTTCA

Coding sequence (CDS)

ATGTTATGGATGTACTGGAAATGCTGCTCTGAACGACGGCGAATGATGCGGGGTTTTCTCAACAATATGAACAGGTACTTATCGACCTACAGAGTAGCCGCTAATGCCTTCGAGATGTCTGCAAAACATGGCGAATTGAGGGTTTTCATTGTCGCCGGAGAAGTCTCCGGCGACACCATCGCTTCTCGTCTCATGACATCTCTGAGAACGCTATCTCCTGTTCCTGTTCGTTTCTCCGGCGTCGGAGGCTCCATGATGTCCAAGCAAGGATTGAAGTCTCTATTCCCCATGGAGGATATTGCAGTAATGGGAATATGGGAGCTATTTCCGCATCTAATGAAAATTAGAGTGAATTTGTGGATTGCCTGGTTTATATGGAGACTTTGGCAATGCCAGGAAAAGCTCAAGAGGACCGTTGAAGCTGCTATAGTGTTTCAACCTCATGTCGTTGTAACGGTGGACTCTAAAGGGTTCTCGTTCCGCCTCCTAAAGCAGATACGTGCTAGATATCGAAACGATAAATTGGCTTGTCCAGTACATTTCCATTACGTAGCACCGTCATTCTGGGCTTGGAAAGGGGGTGAAGAAAGGCTGAAAGGTCTTGTTGAATTTGTTGACCACATTTTATGCATACTTCCAAATGAAGCAGAAGTTTGTAAATCAAATGGATTGGCAGCGACCTTTGTGGGGCATCCCATTCTCGAGGATACGTTAGACCTCAATGCTGGGAAGGATGCCTCATTACTGGAGTTGAAAATACAGGGAAGTTGCAAAGATTTTCTAATTCAAAACGACATTCGTGCTGATGCAACAATCATTTCCCTGCTTCCTGGAAGTAGGTTACAGGAAGTCAGCAGAATGATTCCAATCTATGCAAGTACGTTGGAGTTACTGAAAGAATCCTTCCCGGAGCTGACAACAATCATCCACGTTGCTCCTAATGCTGATGTACAGGACCATATAAGTGGAGTCCTTCATAAGTGGCCTGTGCCTGCCGTATTGGTCGCAGGAGGATCACCACAAGCAAAATATGATGCATTCAGTGTAAGTCCTTTCAGTCTACTCAATGCAAGTAAGGTTGCATTATGTACTTCTGGTACAGTTGCTACGGAGTTGCAGCTTGCTCGGTTACCTTGTGTGGTTGCTTACCGAGCTCATTTCTTAACCGAATGGTTAATTCGACACAAAGCGAAAGTATCATACATCTCCCTTCCAAATATTCTCTTAAACTCACCTGTTATCCCAGAGGCACTGTTTCAAGAATGCACTCCAGGAAGGCTACAGTCGATGCTCAAGGAATTGATACGTAACGACGGTCTACGCAACAAACAGATTGTCGCGGCCAAAGAGGTTCTTAAACTGCTGTGTCCTTCAAAAGAAAGTACTAAGATCTTAGCACAGGCGGGTTTGAAATGCACATCTTCATCTTCAATCTGCACACCCAGCATGATAGCGGCATCTACCATACTGTACTATGAAAGGACGCAGTAA

Protein sequence

MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFIWRLWQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICTPSMIAASTILYYERTQ

Homology

[Close]

BLAST of Carg03456-RA vs. NCBI nr
Match: XP_022944498.1 (probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita moschata])

HSP 1 Score: 907.1 bits (2343), Expect = 2.6e-260
Identity = 467/496 (94.15%), Postives = 470/496 (94.76%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMYWKCCSERRRMMRGFL+NMNRYLSTYRVAANAFEMSA HGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYWKCCSERRRMMRGFLSNMNRYLSTYRVAANAFEMSANHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR    
Sbjct: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH
Sbjct: 121 ------------EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE
Sbjct: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTPGRLQSMLKELIRNDGLRNKQIVAA+EVLKLLCP KESTKILA+AGLKCTSSSSICT
Sbjct: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAEEVLKLLCP-KESTKILARAGLKCTSSSSICT 471

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILYYERTQ
Sbjct: 481 PSMIAASTILYYERTQ 471

[Close]

BLAST of Carg03456-RA vs. NCBI nr
Match: XP_023512770.1 (probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 904.8 bits (2337), Expect = 1.3e-259
Identity = 466/496 (93.95%), Postives = 469/496 (94.56%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWEL PHLMKIR    
Sbjct: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELCPHLMKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH
Sbjct: 121 ------------EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE
Sbjct: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPELTTIIHVAPNADVQ+HISGVLHKWPVPAVLVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELTTIIHVAPNADVQEHISGVLHKWPVPAVLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVATELQLARLP VVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVATELQLARLPFVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTP RLQSMLKELIRNDGLRNKQIVAA+EVLKLLCPSKESTKILA+AGLKCTSSSSICT
Sbjct: 421 ECTPRRLQSMLKELIRNDGLRNKQIVAAEEVLKLLCPSKESTKILARAGLKCTSSSSICT 472

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILYYERTQ
Sbjct: 481 PSMIAASTILYYERTQ 472

[Close]

BLAST of Carg03456-RA vs. NCBI nr
Match: XP_022985960.1 (probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita maxima])

HSP 1 Score: 893.3 bits (2307), Expect = 3.8e-256
Identity = 460/496 (92.74%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMYWK CSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYWKGCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR    
Sbjct: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH
Sbjct: 121 ------------EKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTL+L
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLEL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           NAGKDASLLELKIQGSCKDFLI+NDI ADATIISLLPGSRLQEV RMI IYASTLELLKE
Sbjct: 241 NAGKDASLLELKIQGSCKDFLIKNDIPADATIISLLPGSRLQEVCRMISIYASTLELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVATELQLARLPCVVA+RAHFLTEWLI+ KAKVSYISLPNILLNSPVIPEALF 
Sbjct: 361 ALCTSGTVATELQLARLPCVVAFRAHFLTEWLIQRKAKVSYISLPNILLNSPVIPEALFH 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTPGRLQSMLKELIRNDGLRNKQIVAA+EVLKLLCPSKESTKILA+AGLKCTSSSSICT
Sbjct: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAEEVLKLLCPSKESTKILARAGLKCTSSSSICT 472

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILYYERTQ
Sbjct: 481 PSMIAASTILYYERTQ 472

[Close]

BLAST of Carg03456-RA vs. NCBI nr
Match: XP_022149752.1 (probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 770.4 bits (1988), Expect = 3.7e-219
Identity = 402/496 (81.05%), Postives = 429/496 (86.49%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWMY K CSER R+MR FLN+M RY S  R+AANA EM+AKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMYGKLCSERWRVMRSFLNDMKRYASNSRIAANAVEMAAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
            SRLMTSLRTLSPVPVRFSGVGG MMSK+GLKSLFPMEDIAVMGIWELFPHL KIR    
Sbjct: 61  GSRLMTSLRTLSPVPVRFSGVGGPMMSKKGLKSLFPMEDIAVMGIWELFPHLKKIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       E LK TVEAAI+FQPHVVVTVDSKGFSFRLLKQIRARYR++KL  PVH
Sbjct: 121 ------------ENLKMTVEAAIMFQPHVVVTVDSKGFSFRLLKQIRARYRHEKLDGPVH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGE+RLKGL+E VDHILCILPNE EVCKSNGLAATFVGHPILEDTL L
Sbjct: 181 FHYVAPSFWAWKGGEKRLKGLIELVDHILCILPNEDEVCKSNGLAATFVGHPILEDTLQL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDASL ELKIQG+CKDFLI+N I ADATIISLLPGSRLQEVSRM+PIYAST+ELLKE
Sbjct: 241 NVGKDASLQELKIQGNCKDFLIRNGIPADATIISLLPGSRLQEVSRMVPIYASTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL T+IHVAPN  VQD+ISGVLHKWPVPA LVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELITVIHVAPNQHVQDYISGVLHKWPVPARLVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTVA ELQLARLPC+VAYRAH LTEWLIR KA VS+ISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVAMELQLARLPCIVAYRAHLLTEWLIRCKANVSFISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           ECTPGRLQSMLKEL+ +DGLR+KQIVAA++VL+LL PS+ + K LAQ G +CT  S I T
Sbjct: 421 ECTPGRLQSMLKELMHDDGLRDKQIVAAEQVLRLLSPSEGNMKSLAQEGTECT--SPIRT 470

Query: 481 PSMIAASTILYYERTQ 497
           PSMIAASTILY ERTQ
Sbjct: 481 PSMIAASTILYSERTQ 470

[Close]

BLAST of Carg03456-RA vs. NCBI nr
Match: XP_008456392.1 (PREDICTED: probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 766.9 bits (1979), Expect = 4.1e-218
Identity = 397/494 (80.36%), Postives = 425/494 (86.03%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           M WM WKCC +R+R+M+  LNN  RYLS YRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MSWMNWKCCLQRQRVMQSLLNNTKRYLSNYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGLKSLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLKSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDAS LELKIQGSCK+FLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVGKDAS-LELKIQGSCKEFLIKNNISDDATIISLLPGSRLQEVSRMIPIYISTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SMLKE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICT
Sbjct: 421 DCTPAKLHSMLKEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICT 467

Query: 481 PSMIAASTILYYER 495
           PS+IAAS IL+Y++
Sbjct: 481 PSVIAASAILFYKK 467

[Close]

BLAST of Carg03456-RA vs. TAIR10
Match: AT2G04560.1 (transferases, transferring glycosyl groups)

HSP 1 Score: 516.9 bits (1330), Expect = 1.4e-146
Identity = 267/477 (55.97%), Postives = 343/477 (71.91%), Query Frame = 0


Query: 20  LNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFS 79
           L+   +  S+++ A +  + +A  GELRVFIV+GEVSGD I SRLM+SL+ LSP+P+RF+
Sbjct: 14  LSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFN 73

Query: 80  GVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTV 139
           GVGGS+M K+GL SLFPMED+AVMG+WEL PHL K RV                KLK T+
Sbjct: 74  GVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRV----------------KLKETI 133

Query: 140 EAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLA-CPVHFHYVAPSFWAWKGGEERL 199
           +AA+ F+PHVVVTVDSKGFSFRLLK++RARY+  +L  C VHFHYVAPSFWAWKGGE RL
Sbjct: 134 DAAVKFKPHVVVTVDSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRL 193

Query: 200 KGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSCK 259
            GL EFVDH+ CILPNE  VC+ +G+ ATFVGHP+LED  + +  +     ELK++G   
Sbjct: 194 GGLSEFVDHLFCILPNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS- 253

Query: 260 DFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADVQ 319
               ++ I +D+T+IS+LPGSRLQEV RM+PI++  ++LLK+ FP+L T+IHVA N  V 
Sbjct: 254 --FSEHSIPSDSTVISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVD 313

Query: 320 DHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARLP 379
            +I     +WPVPA+LV  GS Q KYDAF         AS+ ALCTSGTVA ELQLA LP
Sbjct: 314 HYIGESFSEWPVPAILVPSGSTQLKYDAF--------GASQAALCTSGTVAVELQLAHLP 373

Query: 380 CVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRND 439
            +VAYRAHFLTE LIR+KAK+ YISLPNILL+SP+IPEALFQ C P  L S+L+ L+ ++
Sbjct: 374 SLVAYRAHFLTELLIRYKAKIPYISLPNILLDSPIIPEALFQACNPSNLASILERLLLDE 433

Query: 440 GLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTS-SSSICTPSMIAASTILYYER 495
            +R +Q+V A+++++LL PS+          + CT   S   TPS++AASTIL Y R
Sbjct: 434 KMRERQVVGAEKLIQLLHPSESR----MGNSIHCTGLESHRYTPSILAASTILSYAR 459

[Close]

BLAST of Carg03456-RA vs. Swiss-Prot
Match: sp|F4IF99|LPXB_ARATH (Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LPXB PE=2 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 2.4e-145
Identity = 267/477 (55.97%), Postives = 343/477 (71.91%), Query Frame = 0


Query: 20  LNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFS 79
           L+   +  S+++ A +  + +A  GELRVFIV+GEVSGD I SRLM+SL+ LSP+P+RF+
Sbjct: 14  LSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFN 73

Query: 80  GVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTV 139
           GVGGS+M K+GL SLFPMED+AVMG+WEL PHL K RV                KLK T+
Sbjct: 74  GVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRV----------------KLKETI 133

Query: 140 EAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLA-CPVHFHYVAPSFWAWKGGEERL 199
           +AA+ F+PHVVVTVDSKGFSFRLLK++RARY+  +L  C VHFHYVAPSFWAWKGGE RL
Sbjct: 134 DAAVKFKPHVVVTVDSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRL 193

Query: 200 KGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSCK 259
            GL EFVDH+ CILPNE  VC+ +G+ ATFVGHP+LED  + +  +     ELK++G   
Sbjct: 194 GGLSEFVDHLFCILPNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS- 253

Query: 260 DFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADVQ 319
               ++ I +D+T+IS+LPGSRLQEV RM+PI++  ++LLK+ FP+L T+IHVA N  V 
Sbjct: 254 --FSEHSIPSDSTVISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVD 313

Query: 320 DHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARLP 379
            +I     +WPVPA+LV  GS Q KYDAF         AS+ ALCTSGTVA ELQLA LP
Sbjct: 314 HYIGESFSEWPVPAILVPSGSTQLKYDAF--------GASQAALCTSGTVAVELQLAHLP 373

Query: 380 CVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRND 439
            +VAYRAHFLTE LIR+KAK+ YISLPNILL+SP+IPEALFQ C P  L S+L+ L+ ++
Sbjct: 374 SLVAYRAHFLTELLIRYKAKIPYISLPNILLDSPIIPEALFQACNPSNLASILERLLLDE 433

Query: 440 GLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTS-SSSICTPSMIAASTILYYER 495
            +R +Q+V A+++++LL PS+          + CT   S   TPS++AASTIL Y R
Sbjct: 434 KMRERQVVGAEKLIQLLHPSESR----MGNSIHCTGLESHRYTPSILAASTILSYAR 459

[Close]

BLAST of Carg03456-RA vs. Swiss-Prot
Match: sp|B6IST7|LPXB_RHOCS (Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=lpxB PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.8e-71
Identity = 156/410 (38.05%), Postives = 234/410 (57.07%), Query Frame = 0


Query: 46  LRVFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGI 105
           L +F++AGE SGD +  RLM +LR      V F+GVGG  M++QGL+SLFPMED+A+ G+
Sbjct: 4   LLIFLIAGEPSGDVLGGRLMAALREAMEGHVEFAGVGGPRMAEQGLQSLFPMEDLALFGL 63

Query: 106 WELFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQ 165
            EL P L  +                 ++L +T +A +   P  VV++D+  F FR    
Sbjct: 64  AELLPRLPTL----------------LKRLDQTTKAVLERTPDAVVSIDAPDFCFR---- 123

Query: 166 IRARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLA 225
           +  R R      P+  HYVAP+ WAW+ G  R + + +F+DH+L +LP E    ++ GL 
Sbjct: 124 VEQRLRRAGARMPL-IHYVAPTVWAWRPG--RARKVAKFLDHLLALLPFEPPYFEAVGLP 183

Query: 226 ATFVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVS 285
            TFVGHP++E      +G DA        G  + F  ++ I  DAT++++LPGSR  EV+
Sbjct: 184 CTFVGHPVVE------SGADA--------GDGERFRRRHGIAPDATVLTVLPGSRRSEVT 243

Query: 286 RMIPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYD 345
           +++P + +TLE+L   +P+L  ++   P   V + ++  +  WPVPA+ + G +   KYD
Sbjct: 244 KLLPDFGATLEILASRYPDLQVVVPTVPG--VAETVAEAVQSWPVPAITLLGDAD--KYD 303

Query: 346 AFSVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLP 405
           AF+        AS  AL  SGTVA EL LAR+P V+AYR H ++  L R   +V Y++L 
Sbjct: 304 AFA--------ASTAALAASGTVALELALARVPAVIAYRIHPVSHALYRRFIRVRYVNLV 363

Query: 406 NILLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLL 456
           NI+L+ P++PE L Q+CTP RL   +  L+     R +QI    EV + L
Sbjct: 364 NIMLDRPLVPELLQQDCTPDRLALAVDRLLNEPSARQEQIDGVTEVARWL 364

[Close]

BLAST of Carg03456-RA vs. Swiss-Prot
Match: sp|Q5FUA3|LPXB_GLUOX (Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=lpxB PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-57
Identity = 139/410 (33.90%), Postives = 217/410 (52.93%), Query Frame = 0


Query: 48  VFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWE 107
           ++I+AGE SGD I +RLM +L    P  V F+GVGG  M   GL SLFPM D+AVMG+ E
Sbjct: 31  IWILAGEASGDVIGARLMQALHAQDPSLV-FAGVGGGRMEALGLHSLFPMSDLAVMGLVE 90

Query: 108 LFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIR 167
           + P L                 Q  ++L   V+   + +P +VVT+DS GF+ RLL++I 
Sbjct: 91  VVPRL----------------RQLSQRLLEAVQDIELRKPDLVVTIDSPGFTLRLLQKI- 150

Query: 168 ARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAAT 227
                 + +     HYVAP  WAW+  E R+K      D +LC+LP E +     GL   
Sbjct: 151 ------ERSGIKRVHYVAPQVWAWR--ENRVKEFPGLWDRLLCLLPFEPDWFAQRGLEGR 210

Query: 228 FVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRM 287
           FVGHP+L+  +               QG+ + F ++++I A A ++ L+PGSR  E  R+
Sbjct: 211 FVGHPVLQSGVR--------------QGNAQRFRLRHNIPAHAPVVILMPGSRRSEAPRL 270

Query: 288 IPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAF 347
           +P++   L++L+  +P++  +I VAP   +   I  ++ KWP+   +V       K+DAF
Sbjct: 271 LPVFRKMLDILRVQYPDICPVIPVAP--VIAPTIRQLIRKWPIQPHIVT--DIHDKHDAF 330

Query: 348 SVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNI 407
           +        A++ AL  SGT   EL +  +P  V YR + +T  + R   KV ++++ N+
Sbjct: 331 A--------AAQCALTKSGTSTLELAMGNVPMAVTYRVNPVTATIARRLIKVPHVAMVNL 388

Query: 408 LLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCP 458
           L    V+PE L + CTP +L   + +L+ +  +  KQ +A  +VL  L P
Sbjct: 391 LAGREVVPELLQENCTPKKLAETVSKLLSDPQMVEKQRMAFADVLDKLSP 388

[Close]

BLAST of Carg03456-RA vs. Swiss-Prot
Match: sp|Q0BS63|LPXB_GRABC (Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=lpxB PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.6e-57
Identity = 142/445 (31.91%), Postives = 228/445 (51.24%), Query Frame = 0


Query: 48  VFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWE 107
           ++IVAGE SGD + +RL+ +LR ++P  +RF+G+GG  M + G +SLFPM ++AVMG+ E
Sbjct: 6   IYIVAGEHSGDVLGARLIHALRAINP-SIRFAGIGGPRMEECGFQSLFPMHELAVMGLIE 65

Query: 108 LFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIR 167
           + P ++K+R                 +L++TV+     +P +V+T+DS GF  RLL+ I+
Sbjct: 66  ILPRVLKLR----------------RRLQQTVQDIETRRPDLVLTIDSPGFCLRLLRAIQ 125

Query: 168 ARYRNDKLACPVHFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAAT 227
                         HYVAP  WAW+  E R+K      + +LC+LP E +      +   
Sbjct: 126 PFGIK-------RVHYVAPQVWAWR--EHRVKRFPGLWERMLCLLPFEEKWFAERNVPGQ 185

Query: 228 FVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRM 287
           FVGHP+LE   D              QG    F  ++ +  +A +I L+PGSR  E  R+
Sbjct: 186 FVGHPVLESGAD--------------QGDAARFRARHSLADNARVIVLMPGSRANEAGRL 245

Query: 288 IPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAF 347
           +P+Y  TL LL ++ P +T +I +A  +     + G +  WPV  + +   +   K+DAF
Sbjct: 246 LPVYGETLRLLMQNIPTITPVIPLA--SSTAHTVRGAVSSWPVQPIFITDIAD--KHDAF 305

Query: 348 SVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNI 407
           +        A++ AL  SGT   EL +  +P  V YR + +T  + R   +V Y+++ N+
Sbjct: 306 A--------AAEAALTKSGTSTLELAMGGVPMAVTYRVNRITAMMARRLIRVPYVAMVNL 365

Query: 408 LLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVA--AKEVLKLLCPSKESTKIL 467
           L    ++PE L + CTP ++ ++L  L+ N    N    A   K+ LK +  S  +    
Sbjct: 366 LAGREIVPELLQENCTPTKIAAVLTSLMNNAPDTNGMGAADSQKQALKAVVASLHAPNRH 388

Query: 468 AQAGLKCTSSSSICTPSMIAASTIL 491
           A  GL          PS  AA++I+
Sbjct: 426 ASDGL----------PSSAAAASIM 388

[Close]

BLAST of Carg03456-RA vs. Swiss-Prot
Match: sp|Q2W4D7|LPXB_MAGSA (Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=lpxB PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.8e-55
Identity = 134/417 (32.13%), Postives = 214/417 (51.32%), Query Frame = 0


Query: 48  VFIVAGEVSGDTIASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWE 107
           ++++AGE SGD +  RLM +L+      V F+G+GG  M  +GL SLFPM +++VMG+ E
Sbjct: 3   IYLIAGEPSGDLLGGRLMAALKERLGEGVSFAGIGGESMRAEGLTSLFPMTELSVMGLVE 62

Query: 108 LFPHLMKIRVNLWIAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIR 167
           + P + KI                  ++K+T+      +P  +VT+DS GF+ R+   ++
Sbjct: 63  VLPRIPKI----------------LRRVKQTISDIETKRPDALVTIDSWGFNGRIQAGLK 122

Query: 168 ARYRNDKLACPV-HFHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAA 227
           AR        PV   HYVAP  WAWK G  R K L   +D +L +LPNE E  +  GL  
Sbjct: 123 AR------GVPVPRIHYVAPMVWAWKSG--RTKTLARVLDLLLTLLPNEPEWFEKEGLKT 182

Query: 228 TFVGHPILEDTLDLNAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSR 287
             VGHP++E                  +G    F +++    D  ++ +LPGSR  E ++
Sbjct: 183 LHVGHPVIEGAAS--------------RGDGAAFRVRHGFAPDRKLLCVLPGSRHSETAK 242

Query: 288 MIPIYASTLELLKESFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDA 347
           ++  +  T+ LL   FP+L  ++       V D +S  +  W +P+++V G     KYDA
Sbjct: 243 LLAPFGETIALLARRFPDLAVVVPTVET--VADEVSQAVKSWALPSMVVRG---PEKYDA 302

Query: 348 FSVSPFSLLNASKVALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVS--YISL 407
           F+        A   AL  SGTVA EL +ARLP V+ Y+   ++ ++      +S  +++L
Sbjct: 303 FA--------ACDAALAASGTVALELAMARLPAVITYKVSPVSAFIATRFLGLSLKFVTL 362

Query: 408 PNILLNSPVIPEALFQECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKES 462
            NIL++  V+PE L  +C P +L + ++ L+ ++  R  Q   A+  L+ L    ES
Sbjct: 363 VNILVDEAVMPELLQDDCRPDKLAAAVEHLLTDEAARALQAAGARRALEKLGLGGES 368

[Close]

BLAST of Carg03456-RA vs. TrEMBL
Match: tr|A0A1S3C4E2|A0A1S3C4E2_CUCME (probable lipid-A-disaccharide synthase, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496344 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 2.7e-218
Identity = 397/494 (80.36%), Postives = 425/494 (86.03%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           M WM WKCC +R+R+M+  LNN  RYLS YRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MSWMNWKCCLQRQRVMQSLLNNTKRYLSNYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGLKSLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLKSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDAS LELKIQGSCK+FLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVGKDAS-LELKIQGSCKEFLIKNNISDDATIISLLPGSRLQEVSRMIPIYISTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SMLKE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICT
Sbjct: 421 DCTPAKLHSMLKEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICT 467

Query: 481 PSMIAASTILYYER 495
           PS+IAAS IL+Y++
Sbjct: 481 PSVIAASAILFYKK 467

[Close]

BLAST of Carg03456-RA vs. TrEMBL
Match: tr|A0A0A0KBH7|A0A0A0KBH7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168270 PE=4 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 1.0e-217
Identity = 396/495 (80.00%), Postives = 424/495 (85.66%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           MLWM  KCC + +R+M+  LNN  RY S YRVAANAFEM+AKHGELRVFIVAGEVSGDTI
Sbjct: 1   MLWMNCKCCLQPQRVMQSLLNNTRRYFSYYRVAANAFEMAAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGL SLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLTSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRYKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N GKDASL+ELKI+GSCKDFLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVGKDASLIELKIRGSCKDFLIKNNISDDATIISLLPGSRLQEVSRMIPIYLSTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKYDAFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYDAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KA VSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKANVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SM+KELI N+GLRNKQ+VAAKEVLKLL  SK++ K LA+ GLKCT  SS+CT
Sbjct: 421 DCTPAKLHSMIKELICNNGLRNKQVVAAKEVLKLLSSSKDNMKFLAKEGLKCT--SSMCT 469

Query: 481 PSMIAASTILYYERT 496
           PSMIAAS IL+Y+RT
Sbjct: 481 PSMIAASAILFYKRT 469

[Close]

BLAST of Carg03456-RA vs. TrEMBL
Match: tr|A0A1S3C378|A0A1S3C378_CUCME (probable lipid-A-disaccharide synthase, mitochondrial isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496344 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 1.7e-207
Identity = 384/494 (77.73%), Postives = 414/494 (83.81%), Query Frame = 0


Query: 1   MLWMYWKCCSERRRMMRGFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60
           M WM WKCC +R+R+M+  LNN  RYLS YRVAANAFEMSAKHGELRVFIVAGEVSGDTI
Sbjct: 1   MSWMNWKCCLQRQRVMQSLLNNTKRYLSNYRVAANAFEMSAKHGELRVFIVAGEVSGDTI 60

Query: 61  ASRLMTSLRTLSPVPVRFSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLW 120
           ASRLM SLRTLSPVPV FSGVGG MMSKQGLKSLF MEDIAVMGIWELF HL  IR    
Sbjct: 61  ASRLMASLRTLSPVPVNFSGVGGPMMSKQGLKSLFLMEDIAVMGIWELFSHLKSIR---- 120

Query: 121 IAWFXXXXXQCQEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVH 180
                       EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+H
Sbjct: 121 ------------EKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLH 180

Query: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDL 240
           FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDL
Sbjct: 181 FHYVAPSFWAWKGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDL 240

Query: 241 NAGKDASLLELKIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKE 300
           N  +     ELKIQG+     ++N +  DATIISLLPGSRLQEVSRMIPIY ST+ELLKE
Sbjct: 241 NVVRLNP--ELKIQGTRH---LRNFVFEDATIISLLPGSRLQEVSRMIPIYISTMELLKE 300

Query: 301 SFPELTTIIHVAPNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKV 360
           SFPEL TIIHVAPN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKV
Sbjct: 301 SFPELITIIHVAPNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKV 360

Query: 361 ALCTSGTVATELQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQ 420
           ALCTSGTV TELQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ
Sbjct: 361 ALCTSGTVVTELQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQ 420

Query: 421 ECTPGRLQSMLKELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICT 480
           +CTP +L SMLKE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICT
Sbjct: 421 DCTPAKLHSMLKEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICT 463

Query: 481 PSMIAASTILYYER 495
           PS+IAAS IL+Y++
Sbjct: 481 PSVIAASAILFYKK 463

[Close]

BLAST of Carg03456-RA vs. TrEMBL
Match: tr|A0A2N9FMH6|A0A2N9FMH6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15973 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.6e-168
Identity = 311/475 (65.47%), Postives = 368/475 (77.47%), Query Frame = 0


Query: 18  GFLNNMNRYLSTYRVAANAFEMSAKHGELRVFIVAGEVSGDTIASRLMTSLRTLSPVPVR 77
           G  + + RY+S    A    +M+AK GELRVFIV+GEVSGD+I SRLM SL+ L PVP+ 
Sbjct: 16  GVSSLLRRYISVSGRA--VMDMAAKDGELRVFIVSGEVSGDSIGSRLMASLKKLCPVPIH 75

Query: 78  FSGVGGSMMSKQGLKSLFPMEDIAVMGIWELFPHLMKIRVNLWIAWFXXXXXQCQEKLKR 137
           FSGVGGSMMS+QGLKSLFPMEDIAVMGIWEL PHL KIR+                KLK 
Sbjct: 76  FSGVGGSMMSRQGLKSLFPMEDIAVMGIWELLPHLNKIRL----------------KLKE 135

Query: 138 TVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVHFHYVAPSFWAWKGGEER 197
           T+EAA +FQPHVVVTVDSKGFSFRLLKQ+RA+Y    L  PVHFHYVAPSFWAWKGGE R
Sbjct: 136 TIEAAFLFQPHVVVTVDSKGFSFRLLKQLRAKYSQQGLDGPVHFHYVAPSFWAWKGGEAR 195

Query: 198 LKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLELKIQGSC 257
           LKGL EFVD +LCILPNE EVCKSNGLAATFVGHP++ED L+LN GKD S  E K++   
Sbjct: 196 LKGLTEFVDQVLCILPNEEEVCKSNGLAATFVGHPVMEDLLELNLGKDTSPHERKVERVF 255

Query: 258 KDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHVAPNADV 317
           +DF  +N I A AT+ISLLPGSRLQEV++M+ I+++T+ELLK+SFPEL ++IHVAPN  V
Sbjct: 256 EDFRSKNAIPAGATVISLLPGSRLQEVTKMLSIFSNTMELLKDSFPELMSVIHVAPNHHV 315

Query: 318 QDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATELQLARL 377
           + +I+G++HKWPVPAVL+ GG PQ KYDAFS        AS+VALCTSGTVA E+QLARL
Sbjct: 316 EKYITGIVHKWPVPAVLIPGGLPQLKYDAFS--------ASRVALCTSGTVALEMQLARL 375

Query: 378 PCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSMLKELIRN 437
           PCVVAYRAH LTEW I +KAK+SYISLPNILL+S +IPEALFQ CTP +L S+L ELI N
Sbjct: 376 PCVVAYRAHLLTEWFIHYKAKISYISLPNILLDSAIIPEALFQACTPTKLTSLLMELIHN 435

Query: 438 DGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICTPSMIAASTILYY 493
           +GLR +QIVAA++V++LL PS+ +     Q   +        TPSMIAASTILYY
Sbjct: 436 EGLREEQIVAAEKVIRLLYPSERNINSFLQQDSRLRFPD--LTPSMIAASTILYY 462

[Close]

BLAST of Carg03456-RA vs. TrEMBL
Match: tr|A0A1S3C2Q1|A0A1S3C2Q1_CUCME (probable lipid-A-disaccharide synthase, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496344 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.3e-164
Identity = 300/363 (82.64%), Postives = 325/363 (89.53%), Query Frame = 0


Query: 132 QEKLKRTVEAAIVFQPHVVVTVDSKGFSFRLLKQIRARYRNDKLACPVHFHYVAPSFWAW 191
           +EKLKRTVEAAIVF+PHV+VTVDSKGFSFRLLKQIRARYR  K+  P+HFHYVAPSFWAW
Sbjct: 45  KEKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRHKMDGPLHFHYVAPSFWAW 104

Query: 192 KGGEERLKGLVEFVDHILCILPNEAEVCKSNGLAATFVGHPILEDTLDLNAGKDASLLEL 251
           KGGEERLKGLVEFVDHILCILPNE EVCKSN LAATFVGHPILED LDLN GKDAS LEL
Sbjct: 105 KGGEERLKGLVEFVDHILCILPNEEEVCKSNRLAATFVGHPILEDALDLNVGKDAS-LEL 164

Query: 252 KIQGSCKDFLIQNDIRADATIISLLPGSRLQEVSRMIPIYASTLELLKESFPELTTIIHV 311
           KIQGSCK+FLI+N+I  DATIISLLPGSRLQEVSRMIPIY ST+ELLKESFPEL TIIHV
Sbjct: 165 KIQGSCKEFLIKNNISDDATIISLLPGSRLQEVSRMIPIYISTMELLKESFPELITIIHV 224

Query: 312 APNADVQDHISGVLHKWPVPAVLVAGGSPQAKYDAFSVSPFSLLNASKVALCTSGTVATE 371
           APN  VQD+I+GVLHKWPVPA+LVAGGSPQAKY AFS        ASKVALCTSGTV TE
Sbjct: 225 APNQHVQDYINGVLHKWPVPAILVAGGSPQAKYGAFS--------ASKVALCTSGTVVTE 284

Query: 372 LQLARLPCVVAYRAHFLTEWLIRHKAKVSYISLPNILLNSPVIPEALFQECTPGRLQSML 431
           LQLARLPCVVAYRAHFLTEW IR KAKVSYISLPNILLNSPVIPEALFQ+CTP +L SML
Sbjct: 285 LQLARLPCVVAYRAHFLTEWFIRRKAKVSYISLPNILLNSPVIPEALFQDCTPAKLHSML 344

Query: 432 KELIRNDGLRNKQIVAAKEVLKLLCPSKESTKILAQAGLKCTSSSSICTPSMIAASTILY 491
           KE+I N+GLRNKQ+VAA+EVLKLL  SK++ K LA+ GLKCT  SSICTPS+IAAS IL+
Sbjct: 345 KEIISNNGLRNKQVVAAEEVLKLLSSSKDNMKFLAKEGLKCT--SSICTPSVIAASAILF 396

Query: 492 YER 495
           Y++
Sbjct: 405 YKK 396

The following BLAST results are available for this feature:

BLAST of Carg03456-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944498.1	2.6e-260	94.15	probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita moschata]	[more]
XP_023512770.1	1.3e-259	93.95	probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cucurbita pepo...	[more]
XP_022985960.1	3.8e-256	92.74	probable lipid-A-disaccharide synthase, mitochondrial [Cucurbita maxima]	[more]
XP_022149752.1	3.7e-219	81.05	probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Momordica char...	[more]
XP_008456392.1	4.1e-218	80.36	PREDICTED: probable lipid-A-disaccharide synthase, mitochondrial isoform X1 [Cuc...	[more]

BLAST of Carg03456-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04560.1	1.4e-146	55.97	transferases, transferring glycosyl groups	[more]

BLAST of Carg03456-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4IF99\|LPXB_ARATH	2.4e-145	55.97	Probable lipid-A-disaccharide synthase, mitochondrial OS=Arabidopsis thaliana OX...	[more]
sp\|B6IST7\|LPXB_RHOCS	6.8e-71	38.05	Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW...	[more]
sp\|Q5FUA3\|LPXB_GLUOX	1.5e-57	33.90	Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain 621H) OX=290633 G...	[more]
sp\|Q0BS63\|LPXB_GRABC	5.6e-57	31.91	Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-126...	[more]
sp\|Q2W4D7\|LPXB_MAGSA	6.8e-55	32.13	Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATC...	[more]

BLAST of Carg03456-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4E2\|A0A1S3C4E2_CUCME	2.7e-218	80.36	probable lipid-A-disaccharide synthase, mitochondrial isoform X1 OS=Cucumis melo...	[more]
tr\|A0A0A0KBH7\|A0A0A0KBH7_CUCSA	1.0e-217	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168270 PE=4 SV=1	[more]
tr\|A0A1S3C378\|A0A1S3C378_CUCME	1.7e-207	77.73	probable lipid-A-disaccharide synthase, mitochondrial isoform X3 OS=Cucumis melo...	[more]
tr\|A0A2N9FMH6\|A0A2N9FMH6_FAGSY	2.6e-168	65.47	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15973 PE=4 SV=1	[more]
tr\|A0A1S3C2Q1\|A0A1S3C2Q1_CUCME	1.3e-164	82.64	probable lipid-A-disaccharide synthase, mitochondrial isoform X2 OS=Cucumis melo...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009245	lipid A biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008915	lipid-A-disaccharide synthase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003835	Glyco_trans_19

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009245	lipid A biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008915	lipid-A-disaccharide synthase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg03456	Carg03456	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03456-RA.three_prime_UTR.1	Carg03456-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03456-RA.CDS.8	Carg03456-RA.CDS.8	CDS
Carg03456-RA.CDS.7	Carg03456-RA.CDS.7	CDS
Carg03456-RA.CDS.6	Carg03456-RA.CDS.6	CDS
Carg03456-RA.CDS.5	Carg03456-RA.CDS.5	CDS
Carg03456-RA.CDS.4	Carg03456-RA.CDS.4	CDS
Carg03456-RA.CDS.3	Carg03456-RA.CDS.3	CDS
Carg03456-RA.CDS.2	Carg03456-RA.CDS.2	CDS
Carg03456-RA.CDS.1	Carg03456-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03456-RA.five_prime_UTR.1	Carg03456-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03456-RA.exon.8	Carg03456-RA.exon.8	exon
Carg03456-RA.exon.7	Carg03456-RA.exon.7	exon
Carg03456-RA.exon.6	Carg03456-RA.exon.6	exon
Carg03456-RA.exon.5	Carg03456-RA.exon.5	exon
Carg03456-RA.exon.4	Carg03456-RA.exon.4	exon
Carg03456-RA.exon.3	Carg03456-RA.exon.3	exon
Carg03456-RA.exon.2	Carg03456-RA.exon.2	exon
Carg03456-RA.exon.1	Carg03456-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg03456-RA	Carg03456-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003835	Glycosyl transferase, family 19	PFAM	PF02684	LpxB	coord: 48..462 e-value: 2.5E-68 score: 230.5
IPR003835	Glycosyl transferase, family 19	PANTHER	PTHR30372	LIPID-A-DISACCHARIDE SYNTHASE	coord: 36..464
None	No IPR available	PANTHER	PTHR30372:SF3	LIPID-A-DISACCHARIDE SYNTHASE, MITOCHONDRIAL-RELATED	coord: 36..464
None	No IPR available	SUPERFAMILY	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 47..450