Carg03432-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCATTTCCTCACTTCTACTCCGACCTTCTTTATCCCAACAACTTTTCGGACCTTCAGAGCCTATTAATGGCGGCTGGAGACCCCAGGATCGGTGGTATTAGAAACAACGACGACAACAACAACAATAATATTAACTTGCCTCGTGGGGAAGAAACCTTTGATCCTACCTTAGATCAGATGGCGTCGTTTGAGTCCGATACCCAATCGCCGCTCCTAACAATGCCGTATCCCGACCTGACTGTTCCATCATCGCCCGAGTTTAACAAGGGTATGTATGGCATCCATAGCGTAATCGGCAACCAGCCACGTGTGCCCGGCTCGTGCAATTACGATGACGAACTCTTAGGCTTTGTGCCTGATTTGAAGCCCTTTTATCGCAACATCTGGGTAATAATATGTCTCGAAATTCAAAAGCTTAAGCTAATAAGTTATAGTATGATATTTGAAGTATTTTGTGACGTAGGGAACTCAAAGTAGCTACGAATTGCATGGCGTGGAAGAGACAAATATTAAGGTGGCAAGCCGCTACTCGGAAGAAGAAAGAAAAGAGAGAATTGTTAGATATTTGAAAAAGAGAAACCAGAGAAATTTCAACAAAACCATTAAGGTTCTAACAATTCTCCTTTTCTCTCTTAATTTATATAAATATATTGTTATTCGGGATTGTTGGGAGAGGAGTCTCATGTTAACTAATTAACGGGTTGGTCATGAGTTTATAAGTAAGAAACACTATCTTAATTAGTAATGAGTCATTTTAGAAAAGCCTAAAGTAAGCCACGAGAGCTTATACTCAAAGTGGACAATATCATATGGAGGTCCGTAATTACTAACATATAGTTCTTAAAATCCTCATGGTTTTTGTATGTTATTTCACAGTATGCATGTCGCAAAACCCTAGCAGACAGGAGAACACGAGTACGAGGAAGATTTGCTCGCAACAACAACGAGCTTTGTGACACTGAAATCCCTCTCAAAACCAACCATTTAACTGCCCCATCTCACAATCAAAAGGTAAAAACCATACAAATTATCCATTTTTCTTGATTCTATGTTTTTTGTTTATAAAGACAAGACCTTTATCATTTTTTGTGTTTTGTTGTGTTTTTTTGGACAGAATAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA ATGGCTTCATTTCCTCACTTCTACTCCGACCTTCTTTATCCCAACAACTTTTCGGACCTTCAGAGCCTATTAATGGCGGCTGGAGACCCCAGGATCGGTGGTATTAGAAACAACGACGACAACAACAACAATAATATTAACTTGCCTCGTGGGGAAGAAACCTTTGATCCTACCTTAGATCAGATGGCGTCGTTTGAGTCCGATACCCAATCGCCGCTCCTAACAATGCCGTATCCCGACCTGACTGTTCCATCATCGCCCGAGTTTAACAAGGGTATGTATGGCATCCATAGCGTAATCGGCAACCAGCCACGTGTGCCCGGCTCGTGCAATTACGATGACGAACTCTTAGGCTTTGTGCCTGATTTGAAGCCCTTTTATCGCAACATCTGGAATAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA ATGGCTTCATTTCCTCACTTCTACTCCGACCTTCTTTATCCCAACAACTTTTCGGACCTTCAGAGCCTATTAATGGCGGCTGGAGACCCCAGGATCGGTGGTATTAGAAACAACGACGACAACAACAACAATAATATTAACTTGCCTCGTGGGGAAGAAACCTTTGATCCTACCTTAGATCAGATGGCGTCGTTTGAGTCCGATACCCAATCGCCGCTCCTAACAATGCCGTATCCCGACCTGACTGTTCCATCATCGCCCGAGTTTAACAAGGGTATGTATGGCATCCATAGCGTAATCGGCAACCAGCCACGTGTGCCCGGCTCGTGCAATTACGATGACGAACTCTTAGGCTTTGTGCCTGATTTGAAGCCCTTTTATCGCAACATCTGGAATAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGCAAGTTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKEEEEESWLQELAASLMYLPYVTNYGV
BLAST of Carg03432-RA vs. NCBI nr
Match: XP_022943623.1 (zinc finger protein CONSTANS-LIKE 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 258.1 bits (658), Expect = 2.0e-65 Identity = 150/252 (59.52%), Postives = 150/252 (59.52%), Query Frame = 0
BLAST of Carg03432-RA vs. NCBI nr
Match: XP_023511907.1 (zinc finger protein CONSTANS-LIKE 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64 Identity = 150/253 (59.29%), Postives = 155/253 (61.26%), Query Frame = 0
BLAST of Carg03432-RA vs. NCBI nr
Match: XP_022986020.1 (uncharacterized protein LOC111483882 [Cucurbita maxima]) HSP 1 Score: 240.0 bits (611), Expect = 5.6e-60 Identity = 137/252 (54.37%), Postives = 142/252 (56.35%), Query Frame = 0
BLAST of Carg03432-RA vs. NCBI nr
Match: XP_022943624.1 (zinc finger protein CONSTANS-LIKE 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 211.1 bits (536), Expect = 2.8e-51 Identity = 126/228 (55.26%), Postives = 126/228 (55.26%), Query Frame = 0
BLAST of Carg03432-RA vs. NCBI nr
Match: XP_004150045.2 (PREDICTED: uncharacterized protein LOC101221095 [Cucumis sativus] >KGN46811.1 hypothetical protein Csa_6G138620 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 4.5e-33 Identity = 104/271 (38.38%), Postives = 118/271 (43.54%), Query Frame = 0
BLAST of Carg03432-RA vs. TrEMBL
Match: tr|A0A0A0KGC0|A0A0A0KGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G138620 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.0e-33 Identity = 104/271 (38.38%), Postives = 118/271 (43.54%), Query Frame = 0
BLAST of Carg03432-RA vs. TrEMBL
Match: tr|A0A1S4E134|A0A1S4E134_CUCME (uncharacterized protein LOC103496299 OS=Cucumis melo OX=3656 GN=LOC103496299 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32 Identity = 96/152 (63.16%), Postives = 107/152 (70.39%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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