Carg27155 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGGTTTGCATTTTCTGCAATTGCTTTTGGTTGCTTCTGGTGAGTGTTCATTGATTCTTGGAATTGCATTTCTGTGGTTGTTGCAGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTGAGTTCTATGGTGTACCTTGTTCCTTACATGTTTCTACTAAAGCAATCTCATGTTAGTAATTATATAAGAAAATTTGTGGTTTATCTGTGTTTTGGGTTCTTTTTTTTTAATTGCAGGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTAATCTCAACCTACTTTTGCAGCTATGTGCTTTGTTTCCTGCAAATTTAGAGAGGATAATCTGATGCTTGCTTGTTTTATAACTTCGTTATGTAGCTTTTGTTTGGAGATAGTGTCGTGTCATTCGCCTGTTGCAGGCTATTATATGTCGGTTTTTCTTGGAATTTTAAAGATAGGCCCTCTGTTCAGTAACTTGTTGTGCCATTGTTAGGGTGATGCACCAAAATGTGAACAAGAATGTGGAGATGAAAAGCCTTGTTTTTTCGTCGTCTCTATACTAACATATATGTTTTGCAGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTAAGGGATGTTGATTCATCTTTGCATGTGGGCAAAACTGTTAAAATCGTATGGCTTATGATAAAATGTAGAGGAGCTGTACATCATTTGGATTTTATGGCAGAATTACTTGAGAACATTATGTACCTCTTCTGGTCAAACCATTAGAAATTCAATAACTGGTATGCCTATAAGCAAAGTGATGATGTTGGCAAGAAATGCCAATAAAAGAAATCTAACATTTATGCTTTTGCTAAATTTTATTATCATGGAGATTTTTTGTGTAGACTACTGAATTCTCGTTATGTGCTGGGCTGAAGTTTGAAGTCCTATTAGGGTAATTCTTGTACGCATTCTGTGAGATCCCACATCGTTTGGAGAAAAGCATTCTTGTAGGGATGTGGAAACCTATCCCCAGTAGATGCGTTTTAAAAACTTTGAGGGGAGCCTGAAAAGGAAAACCCAAAGAGGACAATATCTGTTAGTGGTGAGCTTGGCCCGCTACACATTCTATGAAACTTGCTCCCTGAAACTCATTGCATAATATAGGTCTTGAACACAATTTGGTTTGGGTTGACTGATAACTTCATTTTAGTCGGTACTCCTTTGTCTCTAACTGGATGGTGGTACTGTATTTATGTTTATTTGGTTAGGTTGCAATCAATAAAATATGAAATGACACATAATTGAAGTTAAATAATTGATGTGCACTAGAAGGCACATTCGAACCTTTTGTTTTGCCTAGGAATACTCTTCCCTCCCGGACTGCCATTTGTATTGGAGCTCAATTTTCTTCTTGACGACTTTGGTTGTATTGGAGCTCTAAAGTTTGTCGTTTTTAAGCAACTCTGAGTCGACTATTGGAGCTCTAAAGTTACCATGTTGTTTCAAGTTCTTAAGCAGCTCTTGACGACTTTGTTTTAAGTTTCTCTGAGTCGACTATTGGAACTCTGAGTCAACTCTGAGTTGAACATAGTGTAGTATTAGTGAACAACTGATTTGGGACAATCCCCAATGTTTGGTGTAAAAGGGTCAGAGGCAGTGTAACACACTGAATTTCTGTCTCGTGCTCTCTGGTTTTTATTTATTGTGAAAGGATTTGGGCAATGAAACAGAAATATGGATTCTCATGTTGAATTCTCATGCTAGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTTAAACTACAATGTTCAAATACATTTACGTGTGCTAAACCAGCGGGGCAATACTGTGATCTGTGTTTGTAGTCGTGGCTGCACGATGCGAAAAACTGCGGTTAATTTATTTAAGTGCTTAACTTTGAGAAACATTTGCACGGAAGTAGAAAGACGTAGGACAGAAAGTGTCTGGATTTGTTGTAATTTGCTTAGTTCTGGCTTTTCTTCAGAGTATATTGAACTGTTCCAAGCTCCCCTTCATTATTATTTTTTCTAGTTTCGCCTTTTTGGTGAAGAGAAAGGACAATGATGGGTTGTTTGGAGCGAGCTCGGTCTAGCAGTGGCATCTTTTACAGCCGCATCCATGAAAGAATGTTAGATTGCTGCTATGCTTCTTATATTGCAGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATATGGAGGTTGGTTGGTTGGTTGGTTCGTCCATGGCAGCTATAAAGTTTTGCCAACTTTGTGACTTGTGTTTGGACAATGCACCAAAGCTTGTTGCTTCTTCCTTCTGATCTGATCACCATGTTCCTCTTCTAGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGAAATTCCTCACCAACTTTGATAGCACATTCTCATTCTCTATTTATGATCTCTCATCCCCAATTCTCACCATCCAAAGAAACTTGGTGAATATTCGAGTAAGAACATGAATTTAATTCCTTCTTCTATGGGTAAATTTTATATATACATTCATGTGCCTTTTATCTGTGCCCACGTTCTCTTTGTATTACTGCTCTACTGGTAAACTCGAGACGACCCTTATCATCGAAATTAAGAAAAATTGTCGAAACTAGCACAAATCTGGGAATTACTCTGTTCAGCTACAGCTTTATTCTAATCTAGTTTATCGTTTTAAATGTTATTATTGATCTCTTTTAGTCTGTCGAACTATAAGAATAAAATTCTAACGAGATTAAAATCTAACTTTCTTCAAATTACAAGGGCTAAATTTGTAATTTAACCATATGTCTCGAGTTCTAAATGA AATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTTAAACTACAATGTTCAAATACATTTACGTGTGCTAAACCAGCGGGGCAATACTGTGATCTGTGTTTGTAGTCGTGGCTGCACGATGCGAAAAACTGCGGTTAATTTATTTAAGTGCTTAACTTTGAGAAACATTTGCACGGAAGTAGAAAGACGTAGGACAGAAAGTGTCTGGATTTGTTGTAATTTGCTTAGTTCTGGCTTTTCTTCAGAGTATATTGAACTGTTCCAAGCTCCCCTTCATTATTATTTTTTCTAGTTTCGCCTTTTTGGTGAAGAGAAAGGACAATGATGGGTTGTTTGGAGCGAGCTCGGTCTAGCAGTGGCATCTTTTACAGCCGCATCCATGAAAGAATGTTAGATTGCTGCTATGCTTCTTATATTGCAGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATATGGAGGTTGGTTGGTTGGTTGGTTCGTCCATGGCAGCTATAAAGTTTTGCCAACTTTGTGACTTGTGTTTGGACAATGCACCAAAGCTTGTTGCTTCTTCCTTCTGATCTGATCACCATGTTCCTCTTCTAGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGAAATTCCTCACCAACTTTGATAGCACATTCTCATTCTCTATTTATGATCTCTCATCCCCAATTCTCACCATCCAAAGAAACTTGGTGAATATTCGAGTAAGAACATGAATTTAATTCCTTCTTCTATGGGTAAATTTTATATATACATTCATGTGCCTTTTATCTGTGCCCACGTTCTCTTTGTATTACTGCTCTACTGGTAAACTCGAGACGACCCTTATCATCGAAATTAAGAAAAATTGTCGAAACTAGCACAAATCTGGGAATTACTCTGTTCAGCTACAGCTTTATTCTAATCTAGTTTATCGTTTTAAATGTTATTATTGATCTCTTTTAGTCTGTCGAACTATAAGAATAAAATTCTAACGAGATTAAAATCTAACTTTCTTCAAATTACAAGGGCTAAATTTGTAATTTAACCATATGTCTCGAGTTCTAAATGA ATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTGGAACCAAAGCGTCGGAAGAGATGA MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKVEPKRRKR
BLAST of Carg27155 vs. NCBI nr
Match: XP_022930734.1 (chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022930735.1 chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022988944.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_022988945.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_023530935.1 chromatin remodeling protein EBS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.7 bits (1127), Expect = 1.3e-119 Identity = 215/247 (87.04%), Postives = 215/247 (87.04%), Query Frame = 0
BLAST of Carg27155 vs. NCBI nr
Match: XP_008455467.1 (PREDICTED: chromatin remodeling protein EBS-like isoform X1 [Cucumis melo]) HSP 1 Score: 429.9 bits (1104), Expect = 6.0e-117 Identity = 210/247 (85.02%), Postives = 214/247 (86.64%), Query Frame = 0
BLAST of Carg27155 vs. NCBI nr
Match: XP_022136260.1 (chromatin remodeling protein EBS-like [Momordica charantia]) HSP 1 Score: 429.9 bits (1104), Expect = 6.0e-117 Identity = 210/247 (85.02%), Postives = 214/247 (86.64%), Query Frame = 0
BLAST of Carg27155 vs. NCBI nr
Match: XP_004144509.1 (PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Cucumis sativus] >KGN43494.1 hypothetical protein Csa_7G041880 [Cucumis sativus]) HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-116 Identity = 209/247 (84.62%), Postives = 214/247 (86.64%), Query Frame = 0
BLAST of Carg27155 vs. NCBI nr
Match: XP_015881180.1 (chromatin remodeling protein EBS-like [Ziziphus jujuba]) HSP 1 Score: 422.5 bits (1085), Expect = 9.5e-115 Identity = 204/247 (82.59%), Postives = 212/247 (85.83%), Query Frame = 0
BLAST of Carg27155 vs. TAIR10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 363.2 bits (931), Expect = 1.2e-100 Identity = 170/239 (71.13%), Postives = 193/239 (80.75%), Query Frame = 0
BLAST of Carg27155 vs. TAIR10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 278.1 bits (710), Expect = 5.3e-75 Identity = 141/245 (57.55%), Postives = 164/245 (66.94%), Query Frame = 0
BLAST of Carg27155 vs. TAIR10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 256.5 bits (654), Expect = 1.6e-68 Identity = 128/187 (68.45%), Postives = 147/187 (78.61%), Query Frame = 0
BLAST of Carg27155 vs. TAIR10
Match: AT4G14700.1 (origin recognition complex 1) HSP 1 Score: 55.8 bits (133), Expect = 4.3e-08 Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of Carg27155 vs. TAIR10
Match: AT4G12620.1 (origin of replication complex 1B) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07 Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of Carg27155 vs. Swiss-Prot
Match: sp|F4JL28|EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.2e-99 Identity = 170/239 (71.13%), Postives = 193/239 (80.75%), Query Frame = 0
BLAST of Carg27155 vs. Swiss-Prot
Match: sp|Q9FEN9|SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 9.5e-74 Identity = 141/245 (57.55%), Postives = 164/245 (66.94%), Query Frame = 0
BLAST of Carg27155 vs. Swiss-Prot
Match: sp|F4JGB7|EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70 Identity = 146/249 (58.63%), Postives = 171/249 (68.67%), Query Frame = 0
BLAST of Carg27155 vs. Swiss-Prot
Match: sp|Q3UHR0|BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=2 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 5.7e-10 Identity = 41/128 (32.03%), Postives = 59/128 (46.09%), Query Frame = 0
BLAST of Carg27155 vs. Swiss-Prot
Match: sp|E6ZGB4|PHF2_DICLA (Lysine-specific demethylase phf2 OS=Dicentrarchus labrax OX=13489 GN=phf2 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 9.7e-10 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A1S3C280|A0A1S3C280_CUCME (chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495624 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 4.0e-117 Identity = 210/247 (85.02%), Postives = 214/247 (86.64%), Query Frame = 0
BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A0A0K3H3|A0A0A0K3H3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041880 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 6.7e-117 Identity = 209/247 (84.62%), Postives = 214/247 (86.64%), Query Frame = 0
BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A067K3V9|A0A067K3V9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13735 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 8.2e-115 Identity = 206/247 (83.40%), Postives = 211/247 (85.43%), Query Frame = 0
BLAST of Carg27155 vs. TrEMBL
Match: tr|D7TEC6|D7TEC6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01180 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 3.1e-114 Identity = 206/247 (83.40%), Postives = 213/247 (86.23%), Query Frame = 0
BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A061DMJ9|A0A061DMJ9_THECC (PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002152 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 7.0e-114 Identity = 204/247 (82.59%), Postives = 210/247 (85.02%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |