CsaV3_7G003320 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCATATGCATGTGATGATGATGGATGATCATCTTGTTCATGCCGCATTCCAACAAAATCCCCATTTCCCATTTTCTCTCTCTTCTTCTTCTCCTTCTCCTTCTCCGTCTCCTTCTTCTTCTTCTCGTCACTCTTCACCTTCTTCCTTTAGGGTTTCTGGGACTTATACACTATCACTCTCACAACTTTCTTAATTTCTCGATTTGCGCCTAATTATCCCAATCCATGATCCCAATCTAACATCTTTTTCAACTCGCATTCTCCTTCAGAGTTTGCTTTGCTTAGTCTTCTTTTTTTTTTCTTCTTCTGTAGCTGCCATAACTCGGATAGTATCATAGATTATTAGCAGGATTAATTCATGGCCAAGACTAAACCTGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTCTGAGAACAAAGATTCCTTTTGTTCTTCTTCTTCTTCTTCTTCTTTTGTTTTTGGGTTTACATTCCCTTGCCCAAACTCCTTCCCGTTTTTGTTGCTTGTTTGTGTTCAAAGCGACACTTAATTGGTCATTTTCTTCGCAATATGACTTTTTGTCATTCAAAGTTTTGGCTTGCATTTTCTCTAATTGCTTTTGGTTGCTTCTAGTGTGTGTCATTGATTTTTGGAATTGGGTTTTTTGTGTTGGTTGTTATTTGCAGATGGTGACTGTGTGTTAATGCGACCGTCGGACTCTGATAAGCCTCCATACGTTGCTCGAGTTGAAAAAATTGAAGCTGATCATCGGAACAATGTGAAGGTTCGAGTTCGGTGGTATTATCGACCCGAAGAATCAATTGGAGGTCGGAGGCAGTTTCATGGGGCAAAGGAGCTTTTTCTCTCCGACCATTTTGATGTTCAGAGTGCTCACACGATAGAGGGCAAATGCACGGTGCACACTTTTAAAAATTATACCAAACTTGAGAATGTTGGTGCGGAGGATTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGATTCACACCAGACCGTGTAGCTGTGTGAGTTCTATGGTGCACTTTCATTTTTCTATTAAAACAAGCTTAAGTTTTTATTTGTATTCGAACATTTGTGTTTTATCTTGGTTTTGGGGTTTGTTTGAATTGCAGGTACTGTAAATGTGAGATGCCATACAACCCCGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTAAGTTCTTTGATTTCTTAATCGCCAGCATGTGCTTACTGCTTTGTTTCATCTTCTGCAACTTTTAGGGAGGATAATCTGATGCTTGCTTGTTCTATTATTGTATTTGTGTAGCTTTTGTTTGGAGATGGTGTCATCTACCTCCACCTTTTGCAGGATTTTCTATTTATGTAAACTGTTCTTTTATGTACCTAGGCTATTTTTTGGGCAGATGGTTTTTCTTGGAAATTTAATAGTAGGCACTCTGTTCATGGTAATTGTTATGACATTATGGGGGTTATGTATCAAAATGTGAACGGCAATTCCGAGATGAAAAGACTAGTTTCTGATTCTTCAAACTCACATATATGTTATACAGGTTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCGAAGAAGTTGGATCATTTTTTGTGTTCAGATTGTTCCTCCGAAAATGAAGCAAAGAGGTCCTTGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTAAGGGATGTTAATTCAACTTTATATATGAGGTACACTGCAAAAATGGCATTACATAGAATCAAATTTAGAGGAGCTGAACAACATTTGGATTTTGTGTCGGAATTACATAGGACATTATATACCTCTTTGTGGTCAGACCATATAAACCTTAAAAAGTCTAAATTGGATTCCTTGTCAGTTTGTAACTGTTATTGTATATTTGCAAAATGAAGATTTTGGGAAGAAATGCGACTAAATGAAATCTAACATACAGACAACTCAATTCTTATGATGTGGAGGGCAGAACCTCGAAAGTCTAGATCTAGTAGGGTAGTTCTTGAAATGCATTCTATGAAACTCTACTGTAAAGCACATTGAATAATATTAGTGGTCTCGAACACAATTTGGTTTAGGTGACTTATAACTTCATTTTCTTATTCCTTTGTCACGATAAAGGAGCTAGGGAATAAAAAGAAGAGAAGAGTCAAGAGGTTTTGATGATTGTAAAGACTATTACAAAGACCTACAGAAACCTAAAAAGTACCAATGCTAAGAGAAAGAAGAGTATGGAATGAACGAGTCAATTCAATATGAACCTAGAAGGTGCATTTGAACTCTTTAGTTTGCCTGGGATTACACCACTCTAGGACTGCCTCTTATGACAAGTAGTTTACATTTGGTACTAGTAGCGGATTCAAAAGTTTTGTTGACTGGAGGTTTTATAATGTAATAAAAATAATCTTAAAAAATGTAAGAAATGTACAAAATGGGGCTTGAATCTGGGTCTAGAGGAGTTGGAAGACTACTTTACGACTGGGCCAACAAGCAATATCAATATAATGTCAGTCATATATATATATATATATATATATATTAGAAGAATTCTAGCAAATAGTACAATTTAGGAAATAAACTAAAAATATAACATAAGGATAAAATATTCGTAAAGCTAGCAAATGTTGGCTAGTTAACTAGTAAAAGTTTTTAAAATGTCAAGTCTGCAATTCAGTGGCTATCATTGATAGTTGCTATCAATAATCGCAACTGATAGCACATTTCTCAAATTGAAAGCTATCACTGCTAGCATCTATCAGTGATGGCAACTTATAGTAGTTATCAATTGCTATCATGTTGCTAATGTTTGCTATCGTTAATAGCTTTCAATTTGAGAAAATTGAGAAGAAGTACTCTTGATTGTGGCAAAAAGAAAGTTATCACTAATAATAACTACCAGTGATAACTTTCAATGTGAGAAAATCGGGAAGAAGTGTGCGACAATCATTTCTCCAATTGAATGCTATCAGTAATAACATCTATTAGTGATGACTTTAAATTTGAGAAATTCAAGAAGTCCCCAAAATGGTTGTTGAACGGGGTTTTTTAGTCAAGTTGACCATGTGGGTGATCCCCAGTCAGGTGTTCGAAGATCACTTGAGTTCTCAGATAATTGTTAGAATCAAGTACCAAAAGAAAAGATCAGAATGGTAATTAATCATGAAATAGATACAAAAATTACATCTCCCACTCATAACAAATGATTCTGCCATTAATCTCTTTCCTTTCTAATGATCTGAATCACATCTGTTTAGATGCATATGATTGCCCACGTCTTTAAAGTTATCCAGCATGGATTGTCCTTTTAGTCTCCTCATAGTCAGGTTCTCTCCTAATATTCCTATGGCAATTCAACTCAGGAGGGTGTAACATAGTGTTAGTGTATGGCTACTTTTTTGGATAATCCCTATGTTTGGCTGTAAAAAGGTCAAAGGCGGTGCAACACTAACAAAATGAATCTTTATCGTGCTTTCTTGTTTTTATTAATTGTGAAAGGATTTTAATCAATGAAACAGACATAAGGATTCTCGTGTTGAATTCTCATGCTAGGTGGAGCCAAAGCGCAGGAAGAGATGATGGGCCGATCAGGATTCATGGAAGTGACAAGGAGGTGCGATTTCCTGGGCCTTTAGTTTCTGTTAATGTTGATGTGGAAATGTACAGCGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTTTTCTTTCTTAAAAAAACTACAGTGTTCAAAATACATTTACGTGTGCTAAACCTGTGGGGTCAATATTGTGATCTCAGATCTGTGTTTGTAGTCGTGGGTACACGATGCAAAAACTGCAGTTATTTTTCTTAAGCGCGTAACTTAAGAAAACATTTGCACGGAAATAGAAAGACTAGGACAGAAGTGTGGAAATGTTGTAATTTGCTTGGCTCTGGCTTTTTTTAAGATTGTATTGAACTGTTCCGAGCCCCCCCTTTTATTATGACGTTTTTTAGTTTCTCTTTTTCGGGAACAATGATGGGTTGTTTGGAGTGAGCTGGTTTACTGATGGCATCTTTTACGGCTGCATCAACCCAAGAAAGAATGTTAGATTGTTGCTATCTTTCTTATTGCAGGTGGATTTTGTACTGTGGATGCAATGGTTGGATCTGAAAGCAGGAGAGTATGGAGGTTGGTTCATCCATGGAAGCTATAATATTAGAGTGCACCAAAGCTTCTTCCTTTTTTATCACAATTTTCCTTTAAATAGACACTCTTCTGCTTACATGAAGCATTTTCTAGGTAAAATGATGCATTGGACAGAATTGATTTTGTTGACTTCCACTTCCAGGCAATTGCAGCCATTATATAGCCATTGAGCTCTGAAATTCCTCACCAACTTCGAAAGCAAACATGGGGGATAAACTTATAGAACTTCCCCATTTTTCTATTTATGATCTCTCATCTCAATTCCTATCATCTAAAGGAATTTGGTGAATGTTTGGGTAAGAATGTGATGAATTTTATTTTGATCCCTTTGGGCCAATTTATATTTACTCATGTGCCTTGTATCTGTGCCCACTTACTCTTTGTATAGATCTTTATTAATAATCTTCAGACAACCCTTCATCCATATATGAATCTAAGAAAACTAACACAAATATGC ATGGCCAAGACTAAACCTGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACATGGTGACTGTGTGTTAATGCGACCGTCGGACTCTGATAAGCCTCCATACGTTGCTCGAGTTGAAAAAATTGAAGCTGATCATCGGAACAATGTGAAGGTTCGAGTTCGGTGGTATTATCGACCCGAAGAATCAATTGGAGGTCGGAGGCAGTTTCATGGGGCAAAGGAGCTTTTTCTCTCCGACCATTTTGATGTTCAGAGTGCTCACACGATAGAGGGCAAATGCACGGTGCACACTTTTAAAAATTATACCAAACTTGAGAATGTTGGTGCGGAGGATTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGATTCACACCAGACCGTGTAGCTGTGTACTGTAAATGTGAGATGCCATACAACCCCGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCGAAGAAGTTGGATCATTTTTTGTGTTCAGATTGTTCCTCCGAAAATGAAGCAAAGAGGTCCTTGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTGGAGCCAAAGCGCAGGAAGAGATGA ATGGCCAAGACTAAACCTGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACATGGTGACTGTGTGTTAATGCGACCGTCGGACTCTGATAAGCCTCCATACGTTGCTCGAGTTGAAAAAATTGAAGCTGATCATCGGAACAATGTGAAGGTTCGAGTTCGGTGGTATTATCGACCCGAAGAATCAATTGGAGGTCGGAGGCAGTTTCATGGGGCAAAGGAGCTTTTTCTCTCCGACCATTTTGATGTTCAGAGTGCTCACACGATAGAGGGCAAATGCACGGTGCACACTTTTAAAAATTATACCAAACTTGAGAATGTTGGTGCGGAGGATTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGATTCACACCAGACCGTGTAGCTGTGTACTGTAAATGTGAGATGCCATACAACCCCGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCGAAGAAGTTGGATCATTTTTTGTGTTCAGATTGTTCCTCCGAAAATGAAGCAAAGAGGTCCTTGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTGGAGCCAAAGCGCAGGAAGAGATGA MAKTKPGKKDLDSYTIKGTNKIVRHGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHTFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSLNAFPVSPSAEAKVEPKRRKR
BLAST of CsaV3_7G003320 vs. NCBI nr
Match: XP_004144509.1 (PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Cucumis sativus] >KGN43494.1 hypothetical protein Csa_7G041880 [Cucumis sativus]) HSP 1 Score: 460.7 bits (1184), Expect = 2.8e-126 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. NCBI nr
Match: XP_008455467.1 (PREDICTED: chromatin remodeling protein EBS-like isoform X1 [Cucumis melo]) HSP 1 Score: 455.3 bits (1170), Expect = 1.2e-124 Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. NCBI nr
Match: XP_022136260.1 (chromatin remodeling protein EBS-like [Momordica charantia]) HSP 1 Score: 452.6 bits (1163), Expect = 7.6e-124 Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. NCBI nr
Match: XP_022930734.1 (chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022930735.1 chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022988944.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_022988945.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_023530935.1 chromatin remodeling protein EBS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 446.8 bits (1148), Expect = 4.1e-122 Identity = 209/216 (96.76%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. NCBI nr
Match: XP_015881180.1 (chromatin remodeling protein EBS-like [Ziziphus jujuba]) HSP 1 Score: 445.3 bits (1144), Expect = 1.2e-121 Identity = 206/216 (95.37%), Postives = 213/216 (98.61%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TAIR10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 382.9 bits (982), Expect = 1.3e-106 Identity = 172/208 (82.69%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TAIR10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 291.2 bits (744), Expect = 5.3e-79 Identity = 138/214 (64.49%), Postives = 164/214 (76.64%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TAIR10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 261.9 bits (668), Expect = 3.4e-70 Identity = 132/187 (70.59%), Postives = 147/187 (78.61%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TAIR10
Match: AT4G14700.1 (origin recognition complex 1) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-08 Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TAIR10
Match: AT4G12620.1 (origin of replication complex 1B) HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07 Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. Swiss-Prot
Match: sp|F4JL28|EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 2.4e-105 Identity = 172/208 (82.69%), Postives = 192/208 (92.31%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. Swiss-Prot
Match: sp|Q9FEN9|SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 9.5e-78 Identity = 138/214 (64.49%), Postives = 164/214 (76.64%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. Swiss-Prot
Match: sp|F4JGB7|EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2) HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72 Identity = 147/223 (65.92%), Postives = 164/223 (73.54%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. Swiss-Prot
Match: sp|Q9P281|BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4) HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10 Identity = 39/125 (31.20%), Postives = 60/125 (48.00%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. Swiss-Prot
Match: sp|O75151|PHF2_HUMAN (Lysine-specific demethylase PHF2 OS=Homo sapiens OX=9606 GN=PHF2 PE=1 SV=4) HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TrEMBL
Match: tr|A0A0A0K3H3|A0A0A0K3H3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041880 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 1.8e-126 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TrEMBL
Match: tr|A0A1S3C280|A0A1S3C280_CUCME (chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495624 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 7.7e-125 Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TrEMBL
Match: tr|A0A067K3V9|A0A067K3V9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13735 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 1.0e-121 Identity = 208/216 (96.30%), Postives = 212/216 (98.15%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TrEMBL
Match: tr|A0A2P5EG34|A0A2P5EG34_9ROSA (Autoimmune regulator OS=Trema orientalis OX=63057 GN=TorRG33x02_197100 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121 Identity = 206/216 (95.37%), Postives = 212/216 (98.15%), Query Frame = 0
BLAST of CsaV3_7G003320 vs. TrEMBL
Match: tr|A0A2G9HXA7|A0A2G9HXA7_9LAMI ([histone H3]-lysine-36 demethylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05134 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 3.0e-121 Identity = 205/216 (94.91%), Postives = 212/216 (98.15%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |