Carg27155 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27155
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	chromatin remodeling protein EBS-like
Location	Cucurbita_argyrosperma_scaffold_474 : 39536 .. 43215 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGGTTTGCATTTTCTGCAATTGCTTTTGGTTGCTTCTGGTGAGTGTTCATTGATTCTTGGAATTGCATTTCTGTGGTTGTTGCAGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTGAGTTCTATGGTGTACCTTGTTCCTTACATGTTTCTACTAAAGCAATCTCATGTTAGTAATTATATAAGAAAATTTGTGGTTTATCTGTGTTTTGGGTTCTTTTTTTTTAATTGCAGGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTAATCTCAACCTACTTTTGCAGCTATGTGCTTTGTTTCCTGCAAATTTAGAGAGGATAATCTGATGCTTGCTTGTTTTATAACTTCGTTATGTAGCTTTTGTTTGGAGATAGTGTCGTGTCATTCGCCTGTTGCAGGCTATTATATGTCGGTTTTTCTTGGAATTTTAAAGATAGGCCCTCTGTTCAGTAACTTGTTGTGCCATTGTTAGGGTGATGCACCAAAATGTGAACAAGAATGTGGAGATGAAAAGCCTTGTTTTTTCGTCGTCTCTATACTAACATATATGTTTTGCAGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTAAGGGATGTTGATTCATCTTTGCATGTGGGCAAAACTGTTAAAATCGTATGGCTTATGATAAAATGTAGAGGAGCTGTACATCATTTGGATTTTATGGCAGAATTACTTGAGAACATTATGTACCTCTTCTGGTCAAACCATTAGAAATTCAATAACTGGTATGCCTATAAGCAAAGTGATGATGTTGGCAAGAAATGCCAATAAAAGAAATCTAACATTTATGCTTTTGCTAAATTTTATTATCATGGAGATTTTTTGTGTAGACTACTGAATTCTCGTTATGTGCTGGGCTGAAGTTTGAAGTCCTATTAGGGTAATTCTTGTACGCATTCTGTGAGATCCCACATCGTTTGGAGAAAAGCATTCTTGTAGGGATGTGGAAACCTATCCCCAGTAGATGCGTTTTAAAAACTTTGAGGGGAGCCTGAAAAGGAAAACCCAAAGAGGACAATATCTGTTAGTGGTGAGCTTGGCCCGCTACACATTCTATGAAACTTGCTCCCTGAAACTCATTGCATAATATAGGTCTTGAACACAATTTGGTTTGGGTTGACTGATAACTTCATTTTAGTCGGTACTCCTTTGTCTCTAACTGGATGGTGGTACTGTATTTATGTTTATTTGGTTAGGTTGCAATCAATAAAATATGAAATGACACATAATTGAAGTTAAATAATTGATGTGCACTAGAAGGCACATTCGAACCTTTTGTTTTGCCTAGGAATACTCTTCCCTCCCGGACTGCCATTTGTATTGGAGCTCAATTTTCTTCTTGACGACTTTGGTTGTATTGGAGCTCTAAAGTTTGTCGTTTTTAAGCAACTCTGAGTCGACTATTGGAGCTCTAAAGTTACCATGTTGTTTCAAGTTCTTAAGCAGCTCTTGACGACTTTGTTTTAAGTTTCTCTGAGTCGACTATTGGAACTCTGAGTCAACTCTGAGTTGAACATAGTGTAGTATTAGTGAACAACTGATTTGGGACAATCCCCAATGTTTGGTGTAAAAGGGTCAGAGGCAGTGTAACACACTGAATTTCTGTCTCGTGCTCTCTGGTTTTTATTTATTGTGAAAGGATTTGGGCAATGAAACAGAAATATGGATTCTCATGTTGAATTCTCATGCTAGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTTAAACTACAATGTTCAAATACATTTACGTGTGCTAAACCAGCGGGGCAATACTGTGATCTGTGTTTGTAGTCGTGGCTGCACGATGCGAAAAACTGCGGTTAATTTATTTAAGTGCTTAACTTTGAGAAACATTTGCACGGAAGTAGAAAGACGTAGGACAGAAAGTGTCTGGATTTGTTGTAATTTGCTTAGTTCTGGCTTTTCTTCAGAGTATATTGAACTGTTCCAAGCTCCCCTTCATTATTATTTTTTCTAGTTTCGCCTTTTTGGTGAAGAGAAAGGACAATGATGGGTTGTTTGGAGCGAGCTCGGTCTAGCAGTGGCATCTTTTACAGCCGCATCCATGAAAGAATGTTAGATTGCTGCTATGCTTCTTATATTGCAGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATATGGAGGTTGGTTGGTTGGTTGGTTCGTCCATGGCAGCTATAAAGTTTTGCCAACTTTGTGACTTGTGTTTGGACAATGCACCAAAGCTTGTTGCTTCTTCCTTCTGATCTGATCACCATGTTCCTCTTCTAGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGAAATTCCTCACCAACTTTGATAGCACATTCTCATTCTCTATTTATGATCTCTCATCCCCAATTCTCACCATCCAAAGAAACTTGGTGAATATTCGAGTAAGAACATGAATTTAATTCCTTCTTCTATGGGTAAATTTTATATATACATTCATGTGCCTTTTATCTGTGCCCACGTTCTCTTTGTATTACTGCTCTACTGGTAAACTCGAGACGACCCTTATCATCGAAATTAAGAAAAATTGTCGAAACTAGCACAAATCTGGGAATTACTCTGTTCAGCTACAGCTTTATTCTAATCTAGTTTATCGTTTTAAATGTTATTATTGATCTCTTTTAGTCTGTCGAACTATAAGAATAAAATTCTAACGAGATTAAAATCTAACTTTCTTCAAATTACAAGGGCTAAATTTGTAATTTAACCATATGTCTCGAGTTCTAAATGA

mRNA sequence

AATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTCGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTTAAACTACAATGTTCAAATACATTTACGTGTGCTAAACCAGCGGGGCAATACTGTGATCTGTGTTTGTAGTCGTGGCTGCACGATGCGAAAAACTGCGGTTAATTTATTTAAGTGCTTAACTTTGAGAAACATTTGCACGGAAGTAGAAAGACGTAGGACAGAAAGTGTCTGGATTTGTTGTAATTTGCTTAGTTCTGGCTTTTCTTCAGAGTATATTGAACTGTTCCAAGCTCCCCTTCATTATTATTTTTTCTAGTTTCGCCTTTTTGGTGAAGAGAAAGGACAATGATGGGTTGTTTGGAGCGAGCTCGGTCTAGCAGTGGCATCTTTTACAGCCGCATCCATGAAAGAATGTTAGATTGCTGCTATGCTTCTTATATTGCAGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATATGGAGGTTGGTTGGTTGGTTGGTTCGTCCATGGCAGCTATAAAGTTTTGCCAACTTTGTGACTTGTGTTTGGACAATGCACCAAAGCTTGTTGCTTCTTCCTTCTGATCTGATCACCATGTTCCTCTTCTAGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGAAATTCCTCACCAACTTTGATAGCACATTCTCATTCTCTATTTATGATCTCTCATCCCCAATTCTCACCATCCAAAGAAACTTGGTGAATATTCGAGTAAGAACATGAATTTAATTCCTTCTTCTATGGGTAAATTTTATATATACATTCATGTGCCTTTTATCTGTGCCCACGTTCTCTTTGTATTACTGCTCTACTGGTAAACTCGAGACGACCCTTATCATCGAAATTAAGAAAAATTGTCGAAACTAGCACAAATCTGGGAATTACTCTGTTCAGCTACAGCTTTATTCTAATCTAGTTTATCGTTTTAAATGTTATTATTGATCTCTTTTAGTCTGTCGAACTATAAGAATAAAATTCTAACGAGATTAAAATCTAACTTTCTTCAAATTACAAGGGCTAAATTTGTAATTTAACCATATGTCTCGAGTTCTAAATGA

Coding sequence (CDS)

ATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTCGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACGCTTAATTGCTGGTGATTGTGTGTTAATGCGACCGTCCGACTCCGATAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTGGAACCAAAGCGTCGGAAGAGATGA

Protein sequence

MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKVEPKRRKR

Homology

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BLAST of Carg27155 vs. NCBI nr
Match: XP_022930734.1 (chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022930735.1 chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022988944.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_022988945.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_023530935.1 chromatin remodeling protein EBS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.7 bits (1127), Expect = 1.3e-119
Identity = 215/247 (87.04%), Postives = 215/247 (87.04%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVR-------------------------------PGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. NCBI nr
Match: XP_008455467.1 (PREDICTED: chromatin remodeling protein EBS-like isoform X1 [Cucumis melo])

HSP 1 Score: 429.9 bits (1104), Expect = 6.0e-117
Identity = 210/247 (85.02%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVR-------------------------------PGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVHSFKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSSEN+AKRS NAFPVSPSAEAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSLNAFPVSPSAEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. NCBI nr
Match: XP_022136260.1 (chromatin remodeling protein EBS-like [Momordica charantia])

HSP 1 Score: 429.9 bits (1104), Expect = 6.0e-117
Identity = 210/247 (85.02%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                G+CV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVR-------------------------------PGECV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVHSFKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSSENDAKRS NAFPVSPSAEAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSENDAKRSLNAFPVSPSAEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. NCBI nr
Match: XP_004144509.1 (PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Cucumis sativus] >KGN43494.1 hypothetical protein Csa_7G041880 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-116
Identity = 209/247 (84.62%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRH-------------------------------GDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVH+FKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHTFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSSEN+AKRS NAFPVSPSAEAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSLNAFPVSPSAEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. NCBI nr
Match: XP_015881180.1 (chromatin remodeling protein EBS-like [Ziziphus jujuba])

HSP 1 Score: 422.5 bits (1085), Expect = 9.5e-115
Identity = 204/247 (82.59%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNK+VR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKVVR-------------------------------PGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDH+D
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVHSFKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI++AKKLD+FLCSDCSS++DAKRS NAFPVSPS E KV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEDAKKLDHFLCSDCSSDDDAKRSLNAFPVSPSVETKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. TAIR10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 363.2 bits (931), Expect = 1.2e-100
Identity = 170/239 (71.13%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 2   AKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCVL 61
           +K K G+K+LDSYTIKGTNK+VR                               AGDCVL
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVR-------------------------------AGDCVL 69

Query: 62  MRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDV 121
           MRPSD+ KPPYVARVEKIEAD RNNVKV  RWYYRPEES+GGRRQFHGAKELFLSDHFDV
Sbjct: 70  MRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDV 129

Query: 122 QSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPD 181
           QSAHTIEGKC VH+FKNYT+L+NVGAEDY+CRFEYKAATG FTPDRVAVYCKCEMPYNPD
Sbjct: 130 QSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPD 189

Query: 182 DLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 241
           DLMVQCEGCKDW+HP+C+GMTI+EAKKLD+F+C++CSS++D K+S N F  SP+ + KV
Sbjct: 190 DLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of Carg27155 vs. TAIR10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 278.1 bits (710), Expect = 5.3e-75
Identity = 141/245 (57.55%), Postives = 164/245 (66.94%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           M K K  +K L SY +K  NK ++                                GD V
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQE-------------------------------GDAV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHF 120
           LMR S+  KP YVARVE IE D R ++ KVRVRWYYRPEESIGGRRQFHGAKE+FLSDHF
Sbjct: 61  LMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFLSDHF 120

Query: 121 DVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYN 180
           D QSA TIEGKC VHSF +YTKLD+VG +D+FCRFEY + TG F PDRV V+CKCEMPYN
Sbjct: 121 DFQSADTIEGKCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYN 180

Query: 181 PDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAK 240
           PDDLMVQCE C +WFHPSC+G TI+EAKK DNF C +CS +     +SN+   S + +AK
Sbjct: 181 PDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHNSNS--TSNNRDAK 212

Query: 241 VEPKR 245
           V  KR
Sbjct: 241 VNGKR 212

[Close]

BLAST of Carg27155 vs. TAIR10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-68
Identity = 128/187 (68.45%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 62  MRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDV 121
           MRPSD+ K PYVARVEKIEAD RNNVKV  RWYY PEES GGRRQ HGAKELFLSDHFDV
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDV 60

Query: 122 QSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPD 181
           QSAHTIEGKC VH+FKNYT+L+NVG EDY+C F+YKAATG FTPDRVAVY KCEMPYN D
Sbjct: 61  QSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSD 120

Query: 182 DLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSEND-AKRSSNAFPVS------P 241
           +LM +   C    H +C+G+TI+EAKKL++F+C +CSS+ D  KR  N F  S      P
Sbjct: 121 ELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLKP 180

[Close]

BLAST of Carg27155 vs. TAIR10
Match: AT4G14700.1 (origin recognition complex 1)

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-08
Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 72  YVARVEKIEADHRNNVK-VRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGK 131
           + AR+EK+  +  + V  +R RWY  PEE++ GR++ +  +EL+L++ F       +   
Sbjct: 245 WAARIEKLWKEVDDGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRH 304

Query: 132 CTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGF 164
           C V   K ++K  N G + + C +EY    G F
Sbjct: 305 CFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSF 337

[Close]

BLAST of Carg27155 vs. TAIR10
Match: AT4G12620.1 (origin of replication complex 1B)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07
Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 72  YVARVEKIEADHRNNVK-VRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGK 131
           + AR++K+  +  + V  +R RWY  PEE++ GR+  +  +EL+L++ F       I   
Sbjct: 248 WAARIDKLWKEVDDGVYWIRARWYMIPEETVSGRQPHNLKRELYLTNDFADIEMECILRH 307

Query: 132 CTVHSFKNYTKLDNVGAEDYFCRFEY 157
           C+V   K ++K  N G + + C +EY
Sbjct: 308 CSVKCPKEFSKASNDGDDVFLCEYEY 333

[Close]

BLAST of Carg27155 vs. Swiss-Prot
Match: sp|F4JL28|EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.2e-99
Identity = 170/239 (71.13%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 2   AKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCVL 61
           +K K G+K+LDSYTIKGTNK+VR                               AGDCVL
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVR-------------------------------AGDCVL 69

Query: 62  MRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDV 121
           MRPSD+ KPPYVARVEKIEAD RNNVKV  RWYYRPEES+GGRRQFHGAKELFLSDHFDV
Sbjct: 70  MRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDV 129

Query: 122 QSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPD 181
           QSAHTIEGKC VH+FKNYT+L+NVGAEDY+CRFEYKAATG FTPDRVAVYCKCEMPYNPD
Sbjct: 130 QSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPD 189

Query: 182 DLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 241
           DLMVQCEGCKDW+HP+C+GMTI+EAKKLD+F+C++CSS++D K+S N F  SP+ + KV
Sbjct: 190 DLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of Carg27155 vs. Swiss-Prot
Match: sp|Q9FEN9|SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.5e-74
Identity = 141/245 (57.55%), Postives = 164/245 (66.94%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           M K K  +K L SY +K  NK ++                                GD V
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQE-------------------------------GDAV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHR-NNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHF 120
           LMR S+  KP YVARVE IE D R ++ KVRVRWYYRPEESIGGRRQFHGAKE+FLSDHF
Sbjct: 61  LMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFLSDHF 120

Query: 121 DVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYN 180
           D QSA TIEGKC VHSF +YTKLD+VG +D+FCRFEY + TG F PDRV V+CKCEMPYN
Sbjct: 121 DFQSADTIEGKCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCEMPYN 180

Query: 181 PDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAK 240
           PDDLMVQCE C +WFHPSC+G TI+EAKK DNF C +CS +     +SN+   S + +AK
Sbjct: 181 PDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHNSNS--TSNNRDAK 212

Query: 241 VEPKR 245
           V  KR
Sbjct: 241 VNGKR 212

[Close]

BLAST of Carg27155 vs. Swiss-Prot
Match: sp|F4JGB7|EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 146/249 (58.63%), Postives = 171/249 (68.67%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTI-KGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDC 60
           MAKT+PG        + K   KI+ R + LG  ++ V                    GDC
Sbjct: 1   MAKTRPGVAFSSKIKLGKKDIKILGREILLGNVIVEV---------------GFFTVGDC 60

Query: 61  VLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHF 120
           VLMRPSD+ K PYVARVEKIEAD RNNVKV  RWYY PEES GGRRQ HGAKELFLSDHF
Sbjct: 61  VLMRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHF 120

Query: 121 DVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYN 180
           DVQSAHTIEGKC VH+FKNYT+L+NVG EDY+C F+YKAATG FTPDRVAVY KCEMPYN
Sbjct: 121 DVQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYN 180

Query: 181 PDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSEND-AKRSSNAFPVS----- 240
            D+LM +   C    H +C+G+TI+EAKKL++F+C +CSS+ D  KR  N F  S     
Sbjct: 181 SDELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDL 233

Query: 241 -PSAEAKVE 242
            PSAE  ++
Sbjct: 241 KPSAEKMID 233

[Close]

BLAST of Carg27155 vs. Swiss-Prot
Match: sp|Q3UHR0|BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 5.7e-10
Identity = 41/128 (32.03%), Postives = 59/128 (46.09%), Query Frame = 0


Query: 51   KRRLIAGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA 110
            K  L  GDC +   +     PY+ R+E +     +N+ V+V+W+Y PEE+  G+RQ  G 
Sbjct: 2516 KETLRIGDCAVFLSAGRPNLPYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQSDGK 2575

Query: 111  KELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL----DNVGAED-YFCRFEYKAATGGF-T 170
              L+ S H D     TI  KC V   + Y ++         +D Y+    Y   TG   T
Sbjct: 2576 NALYQSCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVT 2635

Query: 171  PDRVAVYC 173
             D V V C
Sbjct: 2636 ADGVPVLC 2643

[Close]

BLAST of Carg27155 vs. Swiss-Prot
Match: sp|E6ZGB4|PHF2_DICLA (Lysine-specific demethylase phf2 OS=Dicentrarchus labrax OX=13489 GN=phf2 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.7e-10
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 168 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDC 218
           V VYC C +PY+    M++C+ CKDWFH SC+G+  D+A  +D + C +C
Sbjct: 4   VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDDAPDIDIYHCPNC 53

[Close]

BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A1S3C280|A0A1S3C280_CUCME (chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495624 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 4.0e-117
Identity = 210/247 (85.02%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVR-------------------------------PGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVHSFKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSSEN+AKRS NAFPVSPSAEAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSLNAFPVSPSAEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A0A0K3H3|A0A0A0K3H3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041880 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 6.7e-117
Identity = 209/247 (84.62%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRH-------------------------------GDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVH+FKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHTFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSSEN+AKRS NAFPVSPSAEAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSLNAFPVSPSAEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

[Close]

BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A067K3V9|A0A067K3V9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13735 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 8.2e-115
Identity = 206/247 (83.40%), Postives = 211/247 (85.43%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNKIVR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVR-------------------------------PGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDH+D
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKCTVHSFKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCTVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSS+ DAKRS NAFPVSPS EAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDEDAKRSLNAFPVSPSVEAKV 216

Query: 241 EPKRRKR 248
           E KRRKR
Sbjct: 241 ETKRRKR 216

[Close]

BLAST of Carg27155 vs. TrEMBL
Match: tr|D7TEC6|D7TEC6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01180 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 3.1e-114
Identity = 206/247 (83.40%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNK+VR                               AGDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKVVR-------------------------------AGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDH+D
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKC VHSFKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCIVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+FLCSDCSS++DAKRS NAFPVSPS EAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDHFLCSDCSSDDDAKRSLNAFPVSPS-EAKV 215

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 215

[Close]

BLAST of Carg27155 vs. TrEMBL
Match: tr|A0A061DMJ9|A0A061DMJ9_THECC (PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002152 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 7.0e-114
Identity = 204/247 (82.59%), Postives = 210/247 (85.02%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRRIVSLGTNMIFVLPLVLRLLLLFLCSKRRLIAGDCV 60
           MAKTKPGKKDLDSYTIKGTNK+VR                                GDCV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKVVR-------------------------------PGDCV 60

Query: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFD 120
           LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDH+D
Sbjct: 61  LMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYD 120

Query: 121 VQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180
           VQSAHTIEGKC VH+FKNYTKL+NVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP
Sbjct: 121 VQSAHTIEGKCIVHTFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNP 180

Query: 181 DDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKV 240
           DDLMVQCEGCKDWFHPSCMGMTI+EAKKLD FLCSDCSSE+DAKRS NAF VSPS EAKV
Sbjct: 181 DDLMVQCEGCKDWFHPSCMGMTIEEAKKLDQFLCSDCSSEDDAKRSLNAFAVSPSLEAKV 216

Query: 241 EPKRRKR 248
           EPKRRKR
Sbjct: 241 EPKRRKR 216

The following BLAST results are available for this feature:

BLAST of Carg27155 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930734.1	1.3e-119	87.04	chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022930735.1 chrom...	[more]
XP_008455467.1	6.0e-117	85.02	PREDICTED: chromatin remodeling protein EBS-like isoform X1 [Cucumis melo]	[more]
XP_022136260.1	6.0e-117	85.02	chromatin remodeling protein EBS-like [Momordica charantia]	[more]
XP_004144509.1	1.0e-116	84.62	PREDICTED: BAH and coiled-coil domain-containing protein 1-like isoform X1 [Cucu...	[more]
XP_015881180.1	9.5e-115	82.59	chromatin remodeling protein EBS-like [Ziziphus jujuba]	[more]

BLAST of Carg27155 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22140.1	1.2e-100	71.13	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G39100.1	5.3e-75	57.55	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	1.6e-68	68.45	Bromo-adjacent homology (BAH) domain-containing protein	[more]
AT4G14700.1	4.3e-08	31.18	origin recognition complex 1	[more]
AT4G12620.1	1.6e-07	31.40	origin of replication complex 1B	[more]

BLAST of Carg27155 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JL28\|EBS_ARATH	2.2e-99	71.13	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
sp\|Q9FEN9\|SHL_ARATH	9.5e-74	57.55	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
sp\|F4JGB7\|EBSL_ARATH	1.3e-70	58.63	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
sp\|Q3UHR0\|BAHC1_MOUSE	5.7e-10	32.03	BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahc...	[more]
sp\|E6ZGB4\|PHF2_DICLA	9.7e-10	46.00	Lysine-specific demethylase phf2 OS=Dicentrarchus labrax OX=13489 GN=phf2 PE=3 S...	[more]

BLAST of Carg27155 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C280\|A0A1S3C280_CUCME	4.0e-117	85.02	chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0K3H3\|A0A0A0K3H3_CUCSA	6.7e-117	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041880 PE=4 SV=1	[more]
tr\|A0A067K3V9\|A0A067K3V9_JATCU	8.2e-115	83.40	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13735 PE=4 SV=1	[more]
tr\|D7TEC6\|D7TEC6_VITVI	3.1e-114	83.40	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01180 PE=4 SV=...	[more]
tr\|A0A061DMJ9\|A0A061DMJ9_THECC	7.0e-114	82.59	PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isofo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR019787	Znf_PHD-finger
IPR001025	BAH_dom
IPR001965	Znf_PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003682	chromatin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27155-RA	Carg27155-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 171..218 e-value: 4.7E-10 score: 49.4
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 52..167 e-value: 2.5E-41 score: 153.3
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 56..166 e-value: 2.0E-22 score: 79.2
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 52..167 score: 23.126
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 171..219 e-value: 5.2E-11 score: 42.2
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 169..220 score: 9.25
None	No IPR available	GENE3D	G3DSA:2.30.30.490		coord: 49..170 e-value: 7.5E-29 score: 102.7
None	No IPR available	GENE3D	G3DSA:2.60.120.650		coord: 171..246 e-value: 4.7E-18 score: 67.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..233
None	No IPR available	PANTHER	PTHR12505:SF39	CHROMATIN REMODELING PROTEIN EBS-RELATED	coord: 87..167
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 52..87
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 87..167 coord: 166..235
None	No IPR available	PANTHER	PTHR12505:SF39	CHROMATIN REMODELING PROTEIN EBS-RELATED	coord: 166..235 coord: 52..87
None	No IPR available	CDD	cd04714	BAH_BAHCC1	coord: 57..187 e-value: 1.66545E-55 score: 175.283
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 172..217
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	SSF57903	FYVE/PHD zinc finger	coord: 161..221

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27155	Cla015624	Watermelon (97103) v1	carwmB0296
Carg27155	Csa7G041880	Cucumber (Chinese Long) v2	carcuB0329
Carg27155	MELO3C018842	Melon (DHL92) v3.5.1	carmeB0304
Carg27155	ClCG02G002180	Watermelon (Charleston Gray)	carwcgB0296
Carg27155	CSPI07G03440	Wild cucumber (PI 183967)	carcpiB0335
Carg27155	Cucsa.148810	Cucumber (Gy14) v1	carcgyB0354
Carg27155	CmaCh11G018060	Cucurbita maxima (Rimu)	carcmaB0420
Carg27155	CmoCh11G018810	Cucurbita moschata (Rifu)	carcmoB0415
Carg27155	Lsi11G014240	Bottle gourd (USVL1VR-Ls)	carlsiB278
Carg27155	Cp4.1LG04g03780	Cucurbita pepo (Zucchini)	carcpeB0421
Carg27155	CsGy7G003110	Cucumber (Gy14) v2	carcgybB0315
Carg27155	MELO3C018842.2	Melon (DHL92) v3.6.1	carmedB0315
Carg27155	CsaV3_7G003320	Cucumber (Chinese Long) v3	carcucB0335
Carg27155	Cla97C02G028580	Watermelon (97103) v2	carwmbB0312
Carg27155	Bhi05G001207	Wax gourd	carwgoB0390

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None