Carg10031-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10031-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Non-specific lipid-transfer protein
Location	Cucurbita_argyrosperma_scaffold_039 : 19691 .. 20672 (+)
Sequence length	759

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAAATTCGAGTTCAAACAAACCCAAAATGAAGCTCCTTGGCCCCCTTCTTCCACTCCTGGCCTTGGCCCTGGTGGCTGTTCTTCCGGCGAATGGCCAGACCAATACCCCATGTACTGCCTCCATGCTCTCCTCCTTCACCCCTTGCATGAACTTCCTCGCCAACAGCTCTGCAAATGGCACTTCCCCGACCGCCGACTGCTGTAATGCCATCCGATCACTTGCTAGCGGCGGCCGGGACTGCCTCTGCCTCATCGTCACCGGAGGAGTTCCCTTTCAAATACCCATCAATAGAACTCTCGCCATTTCTCTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGGTATGTATGATTCTAATTATCTCAAAAGTTTGATGTTGTGAAATTTAATGATCTGGGTTCCTCTGTTTCAGCCGCTGCTGCCCCTGTTCCTGCTCCAGGTACCGTTTCTTATCATTGAGATTTTCAGTTCTTCCTCCTGTTAATGATCAAGTAATAATCATGTTTTTGAAATGAACAGGCCCAATTGCTCTTGGACCAAGTTTCCCGCCGGAATCTTCACCGTCGGCAAGTCCTCAAGGTAATGATTAGTCTTGCCTTTTCGAATTACTCTGTTTTTTGTTCTTCTCTGAAAAACTTGGCTTTTTTGCAGCGCCGGAACCCACCACGCCGGCTCTTACTCCGGTAGCTGAAACTCCATCTTCTCCGTTGGTTCCTGATGCGGAAGCTCCGACGGGGACGGCCGGAAGCCGCCCGGTTCTGACTCCCTCCTCCTCTGCAGTCCGTTCAAACAGTTTTCCTTTCATGTTTCTGGGATTCGTATTTGTAATTTTAAAATTCAACTGAGTGTTTGATGGATATTGTTGTTCCTCATGATTCCGATTTCGTTTTCTTTTATTTCTCTCTTGTAATATAATTGTTATTCGCCGGAATTTGATTGGAGTTTTATGATTCTCTTTTCTGTTGA

mRNA sequence

CACCAAATTCGAGTTCAAACAAACCCAAAATGAAGCTCCTTGGCCCCCTTCTTCCACTCCTGGCCTTGGCCCTGGTGGCTGTTCTTCCGGCGAATGGCCAGACCAATACCCCATGTACTGCCTCCATGCTCTCCTCCTTCACCCCTTGCATGAACTTCCTCGCCAACAGCTCTGCAAATGGCACTTCCCCGACCGCCGACTGCTGTAATGCCATCCGATCACTTGCTAGCGGCGGCCGGGACTGCCTCTGCCTCATCGTCACCGGAGGAGTTCCCTTTCAAATACCCATCAATAGAACTCTCGCCATTTCTCTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGCCGCTGCTGCCCCTGTTCCTGCTCCAGGCCCAATTGCTCTTGGACCAAGTTTCCCGCCGGAATCTTCACCGTCGGCAAGTCCTCAAGCGCCGGAACCCACCACGCCGGCTCTTACTCCGGTAGCTGAAACTCCATCTTCTCCGTTGGTTCCTGATGCGGAAGCTCCGACGGGGACGGCCGGAAGCCGCCCGGTTCTGACTCCCTCCTCCTCTGCAGTCCGTTCAAACAGTTTTCCTTTCATGTTTCTGGGATTCGTATTTGTAATTTTAAAATTCAACTGAGTGTTTGATGGATATTGTTGTTCCTCATGATTCCGATTTCGTTTTCTTTTATTTCTCTCTTGTAATATAATTGTTATTCGCCGGAATTTGATTGGAGTTTTATGATTCTCTTTTCTGTTGA

Coding sequence (CDS)

ATGAAGCTCCTTGGCCCCCTTCTTCCACTCCTGGCCTTGGCCCTGGTGGCTGTTCTTCCGGCGAATGGCCAGACCAATACCCCATGTACTGCCTCCATGCTCTCCTCCTTCACCCCTTGCATGAACTTCCTCGCCAACAGCTCTGCAAATGGCACTTCCCCGACCGCCGACTGCTGTAATGCCATCCGATCACTTGCTAGCGGCGGCCGGGACTGCCTCTGCCTCATCGTCACCGGAGGAGTTCCCTTTCAAATACCCATCAATAGAACTCTCGCCATTTCTCTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGCCGCTGCTGCCCCTGTTCCTGCTCCAGGCCCAATTGCTCTTGGACCAAGTTTCCCGCCGGAATCTTCACCGTCGGCAAGTCCTCAAGCGCCGGAACCCACCACGCCGGCTCTTACTCCGGTAGCTGAAACTCCATCTTCTCCGTTGGTTCCTGATGCGGAAGCTCCGACGGGGACGGCCGGAAGCCGCCCGGTTCTGACTCCCTCCTCCTCTGCAGTCCGTTCAAACAGTTTTCCTTTCATGTTTCTGGGATTCGTATTTGTAATTTTAAAATTCAACTGA

Protein sequence

MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGPSFPPESSPSASPQAPEPTTPALTPVAETPSSPLVPDAEAPTGTAGSRPVLTPSSSAVRSNSFPFMFLGFVFVILKFN

Homology

[Close]

BLAST of Carg10031-RA vs. NCBI nr
Match: XP_022959377.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60
           MKLLGP LPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN
Sbjct: 1   MKLLGPFLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60

Query: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120
           AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP
Sbjct: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120

Query: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180
           IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS
Sbjct: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180

Query: 181 AVRSNSFPFMFLGFVFVILKFN 203
           AVRSNSFPFMFLGFVFVILKFN
Sbjct: 181 AVRSNSFPFMFLGFVFVILKFN 202

[Close]

BLAST of Carg10031-RA vs. NCBI nr
Match: XP_023549160.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60
           MKLLGP LPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN
Sbjct: 1   MKLLGPFLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60

Query: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120
           AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP
Sbjct: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120

Query: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180
           IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AEAPTGTAGSRPVLTPSSS
Sbjct: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAPTGTAGSRPVLTPSSS 180

Query: 181 AVRSNSFPFMFLGFVFVILKFN 203
           AVRSNSFPF+FLGFVFVILKFN
Sbjct: 181 AVRSNSFPFLFLGFVFVILKFN 202

[Close]

BLAST of Carg10031-RA vs. NCBI nr
Match: XP_023006752.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 6.9e-79
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60
           MKLLGP LPLLALALVAVLPANGQTN PCTASMLSSFTPCMNFLANSSANGTSPTADCCN
Sbjct: 1   MKLLGPFLPLLALALVAVLPANGQTNAPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60

Query: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120
           AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP
Sbjct: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120

Query: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180
           IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PTGTAGSRPVLTPSSS
Sbjct: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGTAGSRPVLTPSSS 180

Query: 181 AVRSNSFPFMFLGFVFVILKFN 203
           AVRSNSFPF+FLGFVFVILKFN
Sbjct: 181 AVRSNSFPFLFLGFVFVILKFN 202

[Close]

BLAST of Carg10031-RA vs. NCBI nr
Match: XP_008447160.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 150/203 (73.89%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MKLLGPLLPLLALALVA-VLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCC 60
           MK L P   LLA ALVA +LP NGQ N  C+ASM+SSF+PC+NF+ NSSANGTSPTADCC
Sbjct: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60

Query: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPG 120
           NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAA A      
Sbjct: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATA-----X 120

Query: 121 PIALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSS 180
                    XXXXXXXXXXXXXXXXXXXXXXXXXXX     +AEAP+ T GSRPVLTP S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVVPEAEAPSETGGSRPVLTP-S 180

Query: 181 SAVRSNSFP--FMFLGFVFVILK 201
           SAV SNSFP  F+ +G  FVILK
Sbjct: 181 SAVPSNSFPDSFLLMGLAFVILK 197

[Close]

BLAST of Carg10031-RA vs. NCBI nr
Match: XP_022138534.1 (non-specific lipid transfer protein GPI-anchored 2-like [Momordica charantia])

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47
Identity = 147/199 (73.87%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 7   LLPLLALA-LVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSL 66
           LLP+  +A L+ +LP NGQ N PC+ASMLSSFTPC+NF+ NS+ NGTSPTADCCNA+RSL
Sbjct: 14  LLPMALMAFLLLLLPVNGQINMPCSASMLSSFTPCLNFVTNSTGNGTSPTADCCNALRSL 73

Query: 67  ASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGP 126
           ASGGRDCLCLIVTG VPFQIPINRTLA+SLPRACNLPGVPLQCNAAA             
Sbjct: 74  ASGGRDCLCLIVTGRVPFQIPINRTLAVSLPRACNLPGVPLQCNAAAXXXXXXXXXXXXX 133

Query: 127 SFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSSAVRSN 186
              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAPTGTAGSRPVLTP S+AV SN
Sbjct: 134 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGPEAPTGTAGSRPVLTP-SAAVASN 193

Query: 187 SF--PFMFLGFVFVILKFN 203
           SF    + LGF  +I KFN
Sbjct: 194 SFSPSVLLLGFAVLIFKFN 211

[Close]

BLAST of Carg10031-RA vs. TAIR10
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 66/103 (64.08%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 24  QTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPF 83
           Q NTPC+ SMLSS T C +FL   +  G+ PT+DCC A++SL   G DCLCLIVT GVP 
Sbjct: 28  QINTPCSPSMLSSVTGCTSFL---TGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVPI 87

Query: 84  QIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGPS 127
            IPINRTLAISLPRAC +PGVP+QC A+AAP+P PGP + GP+
Sbjct: 88  SIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPT 127

[Close]

BLAST of Carg10031-RA vs. TAIR10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 0


Query: 10  LLALALVAVLPANGQTN--TPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLAS 69
           ++A+  V  LP  GQ    + CT SM+++ +PCM F+ NSS+NGTSP++DCCN++RSL +
Sbjct: 8   VVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLTT 67

Query: 70  GGRDCLCLIVTGGVPFQIPINRTLAISLPRACN 101
           GG  CLCLIVTG VPF IPINRT A+SLPRACN
Sbjct: 68  GGMGCLCLIVTGTVPFNIPINRTTAVSLPRACN 100

[Close]

BLAST of Carg10031-RA vs. TAIR10
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 24  QTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPF 83
           Q +TPCT+SM+S+FTPC+NF+  SS    +PTA CC+++++L + G  C CLI+T  VP 
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 84  QIP-INRTLAISLPRACNLPGV 105
               INRTLA++LPRAC + GV
Sbjct: 82  PTGFINRTLALALPRACKMGGV 103

[Close]

BLAST of Carg10031-RA vs. TAIR10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 9.8e-11
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 13  LALVAVL--PANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGR 72
           +ALVA L      Q ++ C  S L++ +PC++++   + N T+P+  CC+ + S+     
Sbjct: 12  VALVAALWSVTKAQPSSSC-VSTLTTLSPCLSYI---TGNSTTPSQPCCSRLDSVIKSSP 71

Query: 73  DCLCLIVTGGVP-FQIPINRTLAISLPRACNLPGVPL-QCNAAAAPV---PAPGPIALGP 126
            C+C  V   +P   + INRT A+ LP ACN+   PL QCNAA  P    PAP P    P
Sbjct: 72  QCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTEKTP 127

[Close]

BLAST of Carg10031-RA vs. TAIR10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 29  CTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVT-GGVPFQIPI 88
           CT +++ S +PC+N++   + N TSP   CCN +  +     DCLC ++  GG    I +
Sbjct: 28  CTNALI-SMSPCLNYI---TGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINV 87

Query: 89  NRTLAISLPRACNLPGVPL-QCN 110
           N+T A+ LPRACN+   P+ +CN
Sbjct: 88  NQTQALGLPRACNVQTPPVSRCN 106

[Close]

BLAST of Carg10031-RA vs. TrEMBL
Match: tr|A0A1S3BGS3|A0A1S3BGS3_CUCME (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103489676 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 150/203 (73.89%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MKLLGPLLPLLALALVA-VLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCC 60
           MK L P   LLA ALVA +LP NGQ N  C+ASM+SSF+PC+NF+ NSSANGTSPTADCC
Sbjct: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60

Query: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPG 120
           NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAA A      
Sbjct: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATA-----X 120

Query: 121 PIALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSS 180
                    XXXXXXXXXXXXXXXXXXXXXXXXXXX     +AEAP+ T GSRPVLTP S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVVPEAEAPSETGGSRPVLTP-S 180

Query: 181 SAVRSNSFP--FMFLGFVFVILK 201
           SAV SNSFP  F+ +G  FVILK
Sbjct: 181 SAVPSNSFPDSFLLMGLAFVILK 197

[Close]

BLAST of Carg10031-RA vs. TrEMBL
Match: tr|A0A0A0K3Y9|A0A0A0K3Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 145/205 (70.73%), Postives = 159/205 (77.56%), Query Frame = 0


Query: 1   MKLLGPLLPLLALALVAVL---PANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTAD 60
           MK + P   LLA  LVA++     NGQ N  C+ASM+S+F+PC+NF+ NSSANGTSPT+D
Sbjct: 1   MKFVSPFFLLLAFTLVAIILPHSVNGQMNMSCSASMVSTFSPCLNFVTNSSANGTSPTSD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPA 120
           CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAA A    
Sbjct: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAATA---- 120

Query: 121 PGPIALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTP 180
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX    +AEAP+ T GSRPVLTP
Sbjct: 121 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVPEAEAPSETGGSRPVLTP 180

Query: 181 SSSAVRSNSFP--FMFLGFVFVILK 201
           SS  V SNSFP  F+ +G  FVILK
Sbjct: 181 SSD-VPSNSFPNTFLLMGLAFVILK 199

[Close]

BLAST of Carg10031-RA vs. TrEMBL
Match: tr|A0A2I4G5L9|A0A2I4G5L9_9ROSI (non-specific lipid-transfer protein-like protein At2g13820 OS=Juglans regia OX=51240 GN=LOC109004947 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46
Identity = 131/205 (63.90%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 1   MKLLGP---LLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTAD 60
           M+LL P   ++ ++A+ +V ++P +GQ +TPC AS++SSFTPCMN L NS+ANGTSP+AD
Sbjct: 1   MELLMPCSRIVLIMAMVVVLIIPVHGQISTPCNASIISSFTPCMNLLTNSTANGTSPSAD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPA 120
           CCN+++SL SGG DCLCLIVTG VPFQIPINR+LAISLPRACN+PG+P+QC A+AAP+PA
Sbjct: 61  CCNSLKSLTSGGLDCLCLIVTGSVPFQIPINRSLAISLPRACNMPGIPVQCKASAAPIPA 120

Query: 121 PGPIALGPSF------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGS 180
           PGP +LGP+        XXXXXXXXXXXXXXXXXXXXXXXX        D+EAPT T GS
Sbjct: 121 PGPFSLGPTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTPLAPTVDSEAPTATTGS 180

Query: 181 RPVLTPSS---SAVRSNSFPFMFLG 194
           RPVLTPS+   S   S SF  + LG
Sbjct: 181 RPVLTPSAAIPSYSLSPSFLLLVLG 205

[Close]

BLAST of Carg10031-RA vs. TrEMBL
Match: tr|A0A061EN01|A0A061EN01_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_020658 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 122/204 (59.80%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 7   LLPLLALALVA-VLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSL 66
           L+P+L +AL A +LP  GQ NTPC+ SMLS+FTPC+NFL NS+ANGTSPTADCC ++++L
Sbjct: 11  LVPVLFVALTALMLPVYGQINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTL 70

Query: 67  ASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAA-APVPAPGPIALG 126
            SGGRDCLCLIVTG VPFQIPINRTLAISLPRACN+PGVP+QC AAA  PVPAPGPIAL 
Sbjct: 71  TSGGRDCLCLIVTGSVPFQIPINRTLAISLPRACNMPGVPVQCKAAAGVPVPAPGPIALS 130

Query: 127 PSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEA-------PTGTAGSRPVLTP 186
           P+    XXXXXXXXXX XXXX                  +          + GSRPVLTP
Sbjct: 131 PTLSPGXXXXXXXXXXLXXXXTPSAEAPEFDTTPALTPPSXXXXXXXXXXSTGSRPVLTP 190

Query: 187 SSSAVRSNSFPFMFL-GFVFVILK 201
           SS+       PF+ +    FVI K
Sbjct: 191 SSANPAYCFSPFLVVFALSFVIFK 214

[Close]

BLAST of Carg10031-RA vs. TrEMBL
Match: tr|A0A2I4DYD5|A0A2I4DYD5_9ROSI (non-specific lipid-transfer protein-like protein At2g13820 isoform X1 OS=Juglans regia OX=51240 GN=LOC108984605 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.9e-41
Identity = 79/120 (65.83%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 7   LLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLA 66
           ++P+LA+ +V ++P  GQ  TPC  SM+SSFTPC+ F+ NS+ANGTSP+A+CCN+++SL 
Sbjct: 10  IVPILAMVVVLIIPVYGQIGTPCNTSMISSFTPCLRFVTNSTANGTSPSANCCNSLKSLT 69

Query: 67  SGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGPS 126
           SGG+DCLCLIVTG VPF +PINR+LAISLPRACN+PGVPLQC A+ AP+PAPGP++L P+
Sbjct: 70  SGGKDCLCLIVTGNVPFPVPINRSLAISLPRACNMPGVPLQCKASGAPIPAPGPVSLEPT 129

The following BLAST results are available for this feature:

BLAST of Carg10031-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959377.1	1.8e-82	99.50	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata]	[more]
XP_023549160.1	2.5e-81	98.51	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp...	[more]
XP_023006752.1	6.9e-79	96.53	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima]	[more]
XP_008447160.1	2.6e-49	73.89	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
XP_022138534.1	4.1e-47	73.87	non-specific lipid transfer protein GPI-anchored 2-like [Momordica charantia]	[more]

BLAST of Carg10031-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05450.2	2.0e-32	64.08	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22620.1	1.7e-26	60.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48140.1	2.0e-19	52.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	9.8e-11	36.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	8.3e-10	38.55	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of Carg10031-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg10031-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGS3\|A0A1S3BGS3_CUCME	1.7e-49	73.89	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0K3Y9\|A0A0A0K3Y9_CUCSA	2.3e-46	70.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV=1	[more]
tr\|A0A2I4G5L9\|A0A2I4G5L9_9ROSI	6.7e-46	63.90	non-specific lipid-transfer protein-like protein At2g13820 OS=Juglans regia OX=5...	[more]
tr\|A0A061EN01\|A0A061EN01_THECC	1.3e-41	59.80	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
tr\|A0A2I4DYD5\|A0A2I4DYD5_9ROSI	4.9e-41	65.83	non-specific lipid-transfer protein-like protein At2g13820 isoform X1 OS=Juglans...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10031	Carg10031	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10031-RA	Carg10031-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10031-RA.exon.1	Carg10031-RA.exon.1	exon
Carg10031-RA.exon.2	Carg10031-RA.exon.2	exon
Carg10031-RA.exon.3	Carg10031-RA.exon.3	exon
Carg10031-RA.exon.4	Carg10031-RA.exon.4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10031-RA.five_prime_UTR.1	Carg10031-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10031-RA.CDS.1	Carg10031-RA.CDS.1	CDS
Carg10031-RA.CDS.2	Carg10031-RA.CDS.2	CDS
Carg10031-RA.CDS.3	Carg10031-RA.CDS.3	CDS
Carg10031-RA.CDS.4	Carg10031-RA.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10031-RA.three_prime_UTR.1	Carg10031-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 29..108 e-value: 6.4E-6 score: 35.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 13..108 e-value: 7.0E-19 score: 67.7
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 26..108 e-value: 4.3E-14 score: 54.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..179
None	No IPR available	PANTHER	PTHR33044:SF13	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN-RELATED	coord: 10..196
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 10..196
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 37..101 e-value: 6.65749E-12 score: 57.0515
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..106