Carg10031 (gene) Silver-seed gourd

Overview
NameCarg10031
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNon-specific lipid-transfer protein
LocationCucurbita_argyrosperma_scaffold_039 : 19691 .. 20672 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCAAATTCGAGTTCAAACAAACCCAAAATGAAGCTCCTTGGCCCCCTTCTTCCACTCCTGGCCTTGGCCCTGGTGGCTGTTCTTCCGGCGAATGGCCAGACCAATACCCCATGTACTGCCTCCATGCTCTCCTCCTTCACCCCTTGCATGAACTTCCTCGCCAACAGCTCTGCAAATGGCACTTCCCCGACCGCCGACTGCTGTAATGCCATCCGATCACTTGCTAGCGGCGGCCGGGACTGCCTCTGCCTCATCGTCACCGGAGGAGTTCCCTTTCAAATACCCATCAATAGAACTCTCGCCATTTCTCTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGGTATGTATGATTCTAATTATCTCAAAAGTTTGATGTTGTGAAATTTAATGATCTGGGTTCCTCTGTTTCAGCCGCTGCTGCCCCTGTTCCTGCTCCAGGTACCGTTTCTTATCATTGAGATTTTCAGTTCTTCCTCCTGTTAATGATCAAGTAATAATCATGTTTTTGAAATGAACAGGCCCAATTGCTCTTGGACCAAGTTTCCCGCCGGAATCTTCACCGTCGGCAAGTCCTCAAGGTAATGATTAGTCTTGCCTTTTCGAATTACTCTGTTTTTTGTTCTTCTCTGAAAAACTTGGCTTTTTTGCAGCGCCGGAACCCACCACGCCGGCTCTTACTCCGGTAGCTGAAACTCCATCTTCTCCGTTGGTTCCTGATGCGGAAGCTCCGACGGGGACGGCCGGAAGCCGCCCGGTTCTGACTCCCTCCTCCTCTGCAGTCCGTTCAAACAGTTTTCCTTTCATGTTTCTGGGATTCGTATTTGTAATTTTAAAATTCAACTGAGTGTTTGATGGATATTGTTGTTCCTCATGATTCCGATTTCGTTTTCTTTTATTTCTCTCTTGTAATATAATTGTTATTCGCCGGAATTTGATTGGAGTTTTATGATTCTCTTTTCTGTTGA

mRNA sequence

CACCAAATTCGAGTTCAAACAAACCCAAAATGAAGCTCCTTGGCCCCCTTCTTCCACTCCTGGCCTTGGCCCTGGTGGCTGTTCTTCCGGCGAATGGCCAGACCAATACCCCATGTACTGCCTCCATGCTCTCCTCCTTCACCCCTTGCATGAACTTCCTCGCCAACAGCTCTGCAAATGGCACTTCCCCGACCGCCGACTGCTGTAATGCCATCCGATCACTTGCTAGCGGCGGCCGGGACTGCCTCTGCCTCATCGTCACCGGAGGAGTTCCCTTTCAAATACCCATCAATAGAACTCTCGCCATTTCTCTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGCCGCTGCTGCCCCTGTTCCTGCTCCAGGCCCAATTGCTCTTGGACCAAGTTTCCCGCCGGAATCTTCACCGTCGGCAAGTCCTCAAGCGCCGGAACCCACCACGCCGGCTCTTACTCCGGTAGCTGAAACTCCATCTTCTCCGTTGGTTCCTGATGCGGAAGCTCCGACGGGGACGGCCGGAAGCCGCCCGGTTCTGACTCCCTCCTCCTCTGCAGTCCGTTCAAACAGTTTTCCTTTCATGTTTCTGGGATTCGTATTTGTAATTTTAAAATTCAACTGAGTGTTTGATGGATATTGTTGTTCCTCATGATTCCGATTTCGTTTTCTTTTATTTCTCTCTTGTAATATAATTGTTATTCGCCGGAATTTGATTGGAGTTTTATGATTCTCTTTTCTGTTGA

Coding sequence (CDS)

ATGAAGCTCCTTGGCCCCCTTCTTCCACTCCTGGCCTTGGCCCTGGTGGCTGTTCTTCCGGCGAATGGCCAGACCAATACCCCATGTACTGCCTCCATGCTCTCCTCCTTCACCCCTTGCATGAACTTCCTCGCCAACAGCTCTGCAAATGGCACTTCCCCGACCGCCGACTGCTGTAATGCCATCCGATCACTTGCTAGCGGCGGCCGGGACTGCCTCTGCCTCATCGTCACCGGAGGAGTTCCCTTTCAAATACCCATCAATAGAACTCTCGCCATTTCTCTTCCTCGCGCTTGTAACTTGCCTGGTGTCCCCCTCCAATGCAATGCCGCTGCTGCCCCTGTTCCTGCTCCAGGCCCAATTGCTCTTGGACCAAGTTTCCCGCCGGAATCTTCACCGTCGGCAAGTCCTCAAGCGCCGGAACCCACCACGCCGGCTCTTACTCCGGTAGCTGAAACTCCATCTTCTCCGTTGGTTCCTGATGCGGAAGCTCCGACGGGGACGGCCGGAAGCCGCCCGGTTCTGACTCCCTCCTCCTCTGCAGTCCGTTCAAACAGTTTTCCTTTCATGTTTCTGGGATTCGTATTTGTAATTTTAAAATTCAACTGA

Protein sequence

MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGPSFPPESSPSASPQAPEPTTPALTPVAETPSSPLVPDAEAPTGTAGSRPVLTPSSSAVRSNSFPFMFLGFVFVILKFN
Homology
[Close]
BLAST of Carg10031 vs. NCBI nr
Match: XP_022959377.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0 

Query: 1   MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60
           MKLLGP LPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN
Sbjct: 1   MKLLGPFLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60

Query: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120
           AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP
Sbjct: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120

Query: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180
           IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS
Sbjct: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180

Query: 181 AVRSNSFPFMFLGFVFVILKFN 203
           AVRSNSFPFMFLGFVFVILKFN
Sbjct: 181 AVRSNSFPFMFLGFVFVILKFN 202

[Close]
BLAST of Carg10031 vs. NCBI nr
Match: XP_023549160.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0 

Query: 1   MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60
           MKLLGP LPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN
Sbjct: 1   MKLLGPFLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60

Query: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120
           AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP
Sbjct: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120

Query: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180
           IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AEAPTGTAGSRPVLTPSSS
Sbjct: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAPTGTAGSRPVLTPSSS 180

Query: 181 AVRSNSFPFMFLGFVFVILKFN 203
           AVRSNSFPF+FLGFVFVILKFN
Sbjct: 181 AVRSNSFPFLFLGFVFVILKFN 202

[Close]
BLAST of Carg10031 vs. NCBI nr
Match: XP_023006752.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 6.9e-79
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0 

Query: 1   MKLLGPLLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60
           MKLLGP LPLLALALVAVLPANGQTN PCTASMLSSFTPCMNFLANSSANGTSPTADCCN
Sbjct: 1   MKLLGPFLPLLALALVAVLPANGQTNAPCTASMLSSFTPCMNFLANSSANGTSPTADCCN 60

Query: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120
           AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP
Sbjct: 61  AIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGP 120

Query: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSS 180
           IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PTGTAGSRPVLTPSSS
Sbjct: 121 IALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGTAGSRPVLTPSSS 180

Query: 181 AVRSNSFPFMFLGFVFVILKFN 203
           AVRSNSFPF+FLGFVFVILKFN
Sbjct: 181 AVRSNSFPFLFLGFVFVILKFN 202

[Close]
BLAST of Carg10031 vs. NCBI nr
Match: XP_008447160.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 150/203 (73.89%), Postives = 161/203 (79.31%), Query Frame = 0 

Query: 1   MKLLGPLLPLLALALVA-VLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCC 60
           MK L P   LLA ALVA +LP NGQ N  C+ASM+SSF+PC+NF+ NSSANGTSPTADCC
Sbjct: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60

Query: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPG 120
           NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAA A      
Sbjct: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATA-----X 120

Query: 121 PIALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSS 180
                    XXXXXXXXXXXXXXXXXXXXXXXXXXX     +AEAP+ T GSRPVLTP S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVVPEAEAPSETGGSRPVLTP-S 180

Query: 181 SAVRSNSFP--FMFLGFVFVILK 201
           SAV SNSFP  F+ +G  FVILK
Sbjct: 181 SAVPSNSFPDSFLLMGLAFVILK 197

[Close]
BLAST of Carg10031 vs. NCBI nr
Match: XP_022138534.1 (non-specific lipid transfer protein GPI-anchored 2-like [Momordica charantia])

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47
Identity = 147/199 (73.87%), Postives = 160/199 (80.40%), Query Frame = 0 

Query: 7   LLPLLALA-LVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSL 66
           LLP+  +A L+ +LP NGQ N PC+ASMLSSFTPC+NF+ NS+ NGTSPTADCCNA+RSL
Sbjct: 14  LLPMALMAFLLLLLPVNGQINMPCSASMLSSFTPCLNFVTNSTGNGTSPTADCCNALRSL 73

Query: 67  ASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGP 126
           ASGGRDCLCLIVTG VPFQIPINRTLA+SLPRACNLPGVPLQCNAAA             
Sbjct: 74  ASGGRDCLCLIVTGRVPFQIPINRTLAVSLPRACNLPGVPLQCNAAAXXXXXXXXXXXXX 133

Query: 127 SFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSSSAVRSN 186
              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAPTGTAGSRPVLTP S+AV SN
Sbjct: 134 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGPEAPTGTAGSRPVLTP-SAAVASN 193

Query: 187 SF--PFMFLGFVFVILKFN 203
           SF    + LGF  +I KFN
Sbjct: 194 SFSPSVLLLGFAVLIFKFN 211

[Close]
BLAST of Carg10031 vs. TAIR10
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 66/103 (64.08%), Postives = 79/103 (76.70%), Query Frame = 0 

Query: 24  QTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPF 83
           Q NTPC+ SMLSS T C +FL   +  G+ PT+DCC A++SL   G DCLCLIVT GVP 
Sbjct: 28  QINTPCSPSMLSSVTGCTSFL---TGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVPI 87

Query: 84  QIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGPS 127
            IPINRTLAISLPRAC +PGVP+QC A+AAP+P PGP + GP+
Sbjct: 88  SIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPT 127

[Close]
BLAST of Carg10031 vs. TAIR10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-26
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 0 

Query: 10  LLALALVAVLPANGQTN--TPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLAS 69
           ++A+  V  LP  GQ    + CT SM+++ +PCM F+ NSS+NGTSP++DCCN++RSL +
Sbjct: 8   VVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSLTT 67

Query: 70  GGRDCLCLIVTGGVPFQIPINRTLAISLPRACN 101
           GG  CLCLIVTG VPF IPINRT A+SLPRACN
Sbjct: 68  GGMGCLCLIVTGTVPFNIPINRTTAVSLPRACN 100

[Close]
BLAST of Carg10031 vs. TAIR10
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 0 

Query: 24  QTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVTGGVPF 83
           Q +TPCT+SM+S+FTPC+NF+  SS    +PTA CC+++++L + G  C CLI+T  VP 
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 84  QIP-INRTLAISLPRACNLPGV 105
               INRTLA++LPRAC + GV
Sbjct: 82  PTGFINRTLALALPRACKMGGV 103

[Close]
BLAST of Carg10031 vs. TAIR10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 9.8e-11
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 0 

Query: 13  LALVAVL--PANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGR 72
           +ALVA L      Q ++ C  S L++ +PC++++   + N T+P+  CC+ + S+     
Sbjct: 12  VALVAALWSVTKAQPSSSC-VSTLTTLSPCLSYI---TGNSTTPSQPCCSRLDSVIKSSP 71

Query: 73  DCLCLIVTGGVP-FQIPINRTLAISLPRACNLPGVPL-QCNAAAAPV---PAPGPIALGP 126
            C+C  V   +P   + INRT A+ LP ACN+   PL QCNAA  P    PAP P    P
Sbjct: 72  QCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTEKTP 127

[Close]
BLAST of Carg10031 vs. TAIR10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 29  CTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLASGGRDCLCLIVT-GGVPFQIPI 88
           CT +++ S +PC+N++   + N TSP   CCN +  +     DCLC ++  GG    I +
Sbjct: 28  CTNALI-SMSPCLNYI---TGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINV 87

Query: 89  NRTLAISLPRACNLPGVPL-QCN 110
           N+T A+ LPRACN+   P+ +CN
Sbjct: 88  NQTQALGLPRACNVQTPPVSRCN 106

[Close]
BLAST of Carg10031 vs. TrEMBL
Match: tr|A0A1S3BGS3|A0A1S3BGS3_CUCME (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103489676 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 150/203 (73.89%), Postives = 161/203 (79.31%), Query Frame = 0 

Query: 1   MKLLGPLLPLLALALVA-VLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCC 60
           MK L P   LLA ALVA +LP NGQ N  C+ASM+SSF+PC+NF+ NSSANGTSPTADCC
Sbjct: 1   MKFLSPFFLLLAFALVAIILPVNGQMNMSCSASMVSSFSPCLNFVTNSSANGTSPTADCC 60

Query: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPG 120
           NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVP+QCNAA A      
Sbjct: 61  NAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPIQCNAATA-----X 120

Query: 121 PIALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTPSS 180
                    XXXXXXXXXXXXXXXXXXXXXXXXXXX     +AEAP+ T GSRPVLTP S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVVPEAEAPSETGGSRPVLTP-S 180

Query: 181 SAVRSNSFP--FMFLGFVFVILK 201
           SAV SNSFP  F+ +G  FVILK
Sbjct: 181 SAVPSNSFPDSFLLMGLAFVILK 197

[Close]
BLAST of Carg10031 vs. TrEMBL
Match: tr|A0A0A0K3Y9|A0A0A0K3Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 145/205 (70.73%), Postives = 159/205 (77.56%), Query Frame = 0 

Query: 1   MKLLGPLLPLLALALVAVL---PANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTAD 60
           MK + P   LLA  LVA++     NGQ N  C+ASM+S+F+PC+NF+ NSSANGTSPT+D
Sbjct: 1   MKFVSPFFLLLAFTLVAIILPHSVNGQMNMSCSASMVSTFSPCLNFVTNSSANGTSPTSD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPA 120
           CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAA A    
Sbjct: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAATA---- 120

Query: 121 PGPIALGPSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGSRPVLTP 180
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX    +AEAP+ T GSRPVLTP
Sbjct: 121 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVPEAEAPSETGGSRPVLTP 180

Query: 181 SSSAVRSNSFP--FMFLGFVFVILK 201
           SS  V SNSFP  F+ +G  FVILK
Sbjct: 181 SSD-VPSNSFPNTFLLMGLAFVILK 199

[Close]
BLAST of Carg10031 vs. TrEMBL
Match: tr|A0A2I4G5L9|A0A2I4G5L9_9ROSI (non-specific lipid-transfer protein-like protein At2g13820 OS=Juglans regia OX=51240 GN=LOC109004947 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46
Identity = 131/205 (63.90%), Postives = 160/205 (78.05%), Query Frame = 0 

Query: 1   MKLLGP---LLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTAD 60
           M+LL P   ++ ++A+ +V ++P +GQ +TPC AS++SSFTPCMN L NS+ANGTSP+AD
Sbjct: 1   MELLMPCSRIVLIMAMVVVLIIPVHGQISTPCNASIISSFTPCMNLLTNSTANGTSPSAD 60

Query: 61  CCNAIRSLASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPA 120
           CCN+++SL SGG DCLCLIVTG VPFQIPINR+LAISLPRACN+PG+P+QC A+AAP+PA
Sbjct: 61  CCNSLKSLTSGGLDCLCLIVTGSVPFQIPINRSLAISLPRACNMPGIPVQCKASAAPIPA 120

Query: 121 PGPIALGPSF------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEAPTGTAGS 180
           PGP +LGP+        XXXXXXXXXXXXXXXXXXXXXXXX        D+EAPT T GS
Sbjct: 121 PGPFSLGPTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTPLAPTVDSEAPTATTGS 180

Query: 181 RPVLTPSS---SAVRSNSFPFMFLG 194
           RPVLTPS+   S   S SF  + LG
Sbjct: 181 RPVLTPSAAIPSYSLSPSFLLLVLG 205

[Close]
BLAST of Carg10031 vs. TrEMBL
Match: tr|A0A061EN01|A0A061EN01_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_020658 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 122/204 (59.80%), Postives = 142/204 (69.61%), Query Frame = 0 

Query: 7   LLPLLALALVA-VLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSL 66
           L+P+L +AL A +LP  GQ NTPC+ SMLS+FTPC+NFL NS+ANGTSPTADCC ++++L
Sbjct: 11  LVPVLFVALTALMLPVYGQINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTL 70

Query: 67  ASGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAA-APVPAPGPIALG 126
            SGGRDCLCLIVTG VPFQIPINRTLAISLPRACN+PGVP+QC AAA  PVPAPGPIAL 
Sbjct: 71  TSGGRDCLCLIVTGSVPFQIPINRTLAISLPRACNMPGVPVQCKAAAGVPVPAPGPIALS 130

Query: 127 PSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEA-------PTGTAGSRPVLTP 186
           P+    XXXXXXXXXX XXXX                  +          + GSRPVLTP
Sbjct: 131 PTLSPGXXXXXXXXXXLXXXXTPSAEAPEFDTTPALTPPSXXXXXXXXXXSTGSRPVLTP 190

Query: 187 SSSAVRSNSFPFMFL-GFVFVILK 201
           SS+       PF+ +    FVI K
Sbjct: 191 SSANPAYCFSPFLVVFALSFVIFK 214

[Close]
BLAST of Carg10031 vs. TrEMBL
Match: tr|A0A2I4DYD5|A0A2I4DYD5_9ROSI (non-specific lipid-transfer protein-like protein At2g13820 isoform X1 OS=Juglans regia OX=51240 GN=LOC108984605 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.9e-41
Identity = 79/120 (65.83%), Postives = 104/120 (86.67%), Query Frame = 0 

Query: 7   LLPLLALALVAVLPANGQTNTPCTASMLSSFTPCMNFLANSSANGTSPTADCCNAIRSLA 66
           ++P+LA+ +V ++P  GQ  TPC  SM+SSFTPC+ F+ NS+ANGTSP+A+CCN+++SL 
Sbjct: 10  IVPILAMVVVLIIPVYGQIGTPCNTSMISSFTPCLRFVTNSTANGTSPSANCCNSLKSLT 69

Query: 67  SGGRDCLCLIVTGGVPFQIPINRTLAISLPRACNLPGVPLQCNAAAAPVPAPGPIALGPS 126
           SGG+DCLCLIVTG VPF +PINR+LAISLPRACN+PGVPLQC A+ AP+PAPGP++L P+
Sbjct: 70  SGGKDCLCLIVTGNVPFPVPINRSLAISLPRACNMPGVPLQCKASGAPIPAPGPVSLEPT 129

The following BLAST results are available for this feature:
BLAST of Carg10031 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959377.11.8e-8299.50non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata][more]
XP_023549160.12.5e-8198.51non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp... [more]
XP_023006752.16.9e-7996.53non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima][more]
XP_008447160.12.6e-4973.89PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m... [more]
XP_022138534.14.1e-4773.87non-specific lipid transfer protein GPI-anchored 2-like [Momordica charantia][more]
BLAST of Carg10031 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05450.22.0e-3264.08Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G22620.11.7e-2660.22Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G48140.12.0e-1952.44Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G48130.19.8e-1136.67Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G22600.18.3e-1038.55Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
BLAST of Carg10031 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg10031 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BGS3|A0A1S3BGS3_CUCME1.7e-4973.89non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36... [more]
tr|A0A0A0K3Y9|A0A0A0K3Y9_CUCSA2.3e-4670.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV=1[more]
tr|A0A2I4G5L9|A0A2I4G5L9_9ROSI6.7e-4663.90non-specific lipid-transfer protein-like protein At2g13820 OS=Juglans regia OX=5... [more]
tr|A0A061EN01|A0A061EN01_THECC1.3e-4159.80Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
tr|A0A2I4DYD5|A0A2I4DYD5_9ROSI4.9e-4165.83non-specific lipid-transfer protein-like protein At2g13820 isoform X1 OS=Juglans... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036312Bifun_inhib/LTP/seed_sf
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10031-RACarg10031-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 29..108
e-value: 6.4E-6
score: 35.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 13..108
e-value: 7.0E-19
score: 67.7
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 26..108
e-value: 4.3E-14
score: 54.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..179
NoneNo IPR availablePANTHERPTHR33044:SF13BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN-RELATEDcoord: 10..196
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 10..196
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 37..101
e-value: 6.65749E-12
score: 57.0515
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILYSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 33..106

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10031Cla006044Watermelon (97103) v1carwmB0217
Carg10031Cla021610Watermelon (97103) v1carwmB0218
Carg10031Cla007516Watermelon (97103) v1carwmB0219
Carg10031Csa3G146480Cucumber (Chinese Long) v2carcuB0256
Carg10031MELO3C006518Melon (DHL92) v3.5.1carmeB0236
Carg10031ClCG05G005050Watermelon (Charleston Gray)carwcgB0220
Carg10031ClCG07G000380Watermelon (Charleston Gray)carwcgB0225
Carg10031ClCG06G006320Watermelon (Charleston Gray)carwcgB0221
Carg10031CSPI03G12970Wild cucumber (PI 183967)carcpiB0261
Carg10031Cucsa.254440Cucumber (Gy14) v1carcgyB0269
Carg10031CmaCh17G002240Cucurbita maxima (Rimu)carcmaB0314
Carg10031CmaCh14G017240Cucurbita maxima (Rimu)carcmaB0313
Carg10031CmoCh14G017630Cucurbita moschata (Rifu)carcmoB0319
Carg10031CmoCh17G002140Cucurbita moschata (Rifu)carcmoB0320
Carg10031Lsi05G009450Bottle gourd (USVL1VR-Ls)carlsiB207
Carg10031Lsi05G016190Bottle gourd (USVL1VR-Ls)carlsiB206
Carg10031Lsi09G013080Bottle gourd (USVL1VR-Ls)carlsiB204
Carg10031Cp4.1LG03g10790Cucurbita pepo (Zucchini)carcpeB0327
Carg10031Cp4.1LG12g01980Cucurbita pepo (Zucchini)carcpeB0322
Carg10031CsGy3G013120Cucumber (Gy14) v2carcgybB0246
Carg10031MELO3C006518.2Melon (DHL92) v3.6.1carmedB0244
Carg10031CsaV3_3G013110Cucumber (Chinese Long) v3carcucB0261
Carg10031Cla97C05G086180Watermelon (97103) v2carwmbB0229
Carg10031Cla97C06G115840Watermelon (97103) v2carwmbB0230
Carg10031Cla97C07G128650Watermelon (97103) v2carwmbB0233
Carg10031Bhi12G001507Wax gourdcarwgoB0282
Carg10031Bhi01G000570Wax gourdcarwgoB0284
Carg10031Bhi05G000227Wax gourdcarwgoB0286
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10031Carg16833Silver-seed gourdcarcarB263
Carg10031Carg23508Silver-seed gourdcarcarB265
Carg10031Carg06153Silver-seed gourdcarcarB266
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10031Silver-seed gourdcarcarB260
Carg10031Cucurbita maxima (Rimu)carcmaB0316
Carg10031Cucurbita maxima (Rimu)carcmaB0321
Carg10031Cucurbita moschata (Rifu)carcmoB0322
Carg10031Cucurbita moschata (Rifu)carcmoB0326
Carg10031Cucurbita pepo (Zucchini)carcpeB0323
Carg10031Cucurbita pepo (Zucchini)carcpeB0329
Carg10031Watermelon (97103) v1carwmB0215
Carg10031Watermelon (97103) v2carwmbB0235