Carg25094 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAACTGCAATTCCAGGCAACAGAGGTAATGATTTTGAAAGCCGGAGTAGTTAACTACATTTTTCTCTGCTCAACATGAAATGTCGGTAATTTTTACTGGTTTTCTAAAAATATTAGTGTTAATTAGTAATAAATTTTCAGTAATTTTAACGAGATAATACGCTGATGGCTAGAGAATATTTGAAGTTTGAACTTTTCAACTCAATTTTGTATGGGACAGGATCTTACCCAGTACTATTGGCTTTCTTTCAGGTGCCGAAGTTGAAGAAACCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGAAAGGCAACAGTGAAGCTTGAGAAAGCTGCTATTCAAGATGGAACTTGTGTGTGGGAGAATCCTGTTTATGAAACAGTCAAGCTTGTTAGGGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTGGTTTCAACGGTAAGTTATAACAACACAGACTTCCAAATACTCTCCAGTTCGTAATTAGCCATCTGGTGGAGCAAGTTGTAAACTTTTGTGTGTATGTGCAGGGATCATCAAAATCTGGCTTTGTGGGCGAAGCTTCAATTGATTTTGCAGACTTTGAAGCAGAAACTGAACCCATGACAGTTTCCCTTCCTCTCAAGTTCGCAAACTCTGGCGCCATACTACACGTTGGTTCTCTATATTTCTCATCCACTTGA ATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAACTGCAATTCCAGGCAACAGAGGTGCCGAAGTTGAAGAAACCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGAAAGGCAACAGTGAAGCTTGAGAAAGCTGCTATTCAAGATGGAACTTGTGTGTGGGAGAATCCTGTTTATGAAACAGTCAAGCTTGTTAGGGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTGGTTTCAACGGGATCATCAAAATCTGGCTTTGTGGGCGAAGCTTCAATTGATTTTGCAGACTTTGAAGCAGAAACTGAACCCATGACAGTTTCCCTTCCTCTCAAGTTCGCAAACTCTGGCGCCATACTACACGTTGGTTCTCTATATTTCTCATCCACTTGA ATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAACTGCAATTCCAGGCAACAGAGGTGCCGAAGTTGAAGAAACCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGAAAGGCAACAGTGAAGCTTGAGAAAGCTGCTATTCAAGATGGAACTTGTGTGTGGGAGAATCCTGTTTATGAAACAGTCAAGCTTGTTAGGGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTGGTTTCAACGGGATCATCAAAATCTGGCTTTGTGGGCGAAGCTTCAATTGATTTTGCAGACTTTGAAGCAGAAACTGAACCCATGACAGTTTCCCTTCCTCTCAAGTTCGCAAACTCTGGCGCCATACTACACGTTGGTTCTCTATATTTCTCATCCACTTGA MFKSWSKKQKIKAVFKLQFQATEVPKLKKPALMISLVPDDVGKATVKLEKAAIQDGTCVWENPVYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHVGSLYFSST
BLAST of Carg25094 vs. NCBI nr
Match: XP_022952238.1 (interaptin isoform X1 [Cucurbita moschata]) HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg25094 vs. NCBI nr
Match: XP_022952239.1 (myosin-8 isoform X2 [Cucurbita moschata]) HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg25094 vs. NCBI nr
Match: XP_022971836.1 (interaptin-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg25094 vs. NCBI nr
Match: XP_022971835.1 (interaptin-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg25094 vs. NCBI nr
Match: XP_023554173.1 (interaptin [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.9 bits (655), Expect = 3.9e-65 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg25094 vs. TAIR10
Match: AT5G52280.1 (Myosin heavy chain-related protein) HSP 1 Score: 199.9 bits (507), Expect = 1.0e-51 Identity = 100/133 (75.19%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of Carg25094 vs. TAIR10
Match: AT5G41140.1 (Myosin heavy chain-related protein) HSP 1 Score: 149.8 bits (377), Expect = 1.2e-36 Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Carg25094 vs. TAIR10
Match: AT1G63300.1 (Myosin heavy chain-related protein) HSP 1 Score: 142.1 bits (357), Expect = 2.6e-34 Identity = 73/136 (53.68%), Postives = 100/136 (73.53%), Query Frame = 0
BLAST of Carg25094 vs. TAIR10
Match: AT1G22060.1 (LOCATED IN: vacuole) HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26 Identity = 57/126 (45.24%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of Carg25094 vs. TrEMBL
Match: tr|A0A1S3CQ89|A0A1S3CQ89_CUCME (myosin-11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg25094 vs. TrEMBL
Match: tr|A0A1S3CRB4|A0A1S3CRB4_CUCME (myosin-J heavy chain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg25094 vs. TrEMBL
Match: tr|A0A0A0LEL2|A0A0A0LEL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914010 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg25094 vs. TrEMBL
Match: tr|A0A2P4I808|A0A2P4I808_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_56227 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.3e-56 Identity = 109/132 (82.58%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of Carg25094 vs. TrEMBL
Match: tr|W9RWZ3|W9RWZ3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015782 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.1e-55 Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |