Carg08414 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCACCGCCAGCCTTTTCGGCCAAAACTAAACCATATTGCACTTCAGCGTTGTTCCTTCCAACGCTGTACTGCGGCATTGTCTGATAGCCGCCCGCCATGGCAGAGAAGCTTCTCAGTTCTCCTTCCCTATAACTAGTTTCTCTCCTCATCTTTGCCATCTCCTCTAATGAACCTGCTCTAAGCCCACAAAATTTAATTTTTACAGGCCCCCAGCTTTTATTGCTGCTTTCTGGATTTTCCTATCTTGCAGCGACCAGGGAGGACAGAATTAATTCCGGTTCAAACCAGAATAAGTTATCACTACCCCATCAAGTTCTACACAACATTGTATATTCGTATATTCCATCGATTAGAGGTTTTCCTTGTCTGAGATCTAGAACAGAACTGAAACAATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAATTACAGTTCCAGGCAACTCAGGTATTGATTTTGCAGGCCGGAGGGGATAGCTACATTTTTCTCTGCTCAACATGAAATGTCTTCTTCTACCCGAAATTTTTTATTTTCCTGTCAATTAGTTATAAATTTTCTACCCCTTCTAAAGAGATTAAAAGCTGATGCAAGAGAGTTTGTTTGTGTCAATGTGTACGAGTGTGGTTTGTGATAAATGAAGGGAGAGGGACAAGATCTTACTTGATAATATTGATCTTCATTCAGGTGCCGAAGTTGAAGAAATCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGGAAGGCAACAGTGAAGCTAGAGAAAGCTGCTATTCAGGATGGAACTTGTTTCTGGGAGAATCCTATCTATGAAACAGTCAAGCTTGTTAGAGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTTGTTTCAACTGTAAGGCATAGCAACATAAACTTCTATATTTTCTACAACTTGCAATTAGCCATCTGGTGGGAGCAACTTGTAAAATTCTATATGTATGTGTATGCACTATGCAGGGATCATCCAAATCTGGCTTTGTAGGTGAAGCTTCGATCGACTTTGCAGATTTTGAGGCGGAGACTGAACCCATGACTGTTTCCCTACCTCTTAAGTTTGCAAACTCTGGTGCCATATTACACGTTGGTTCTCTCTATCTCTCTCCATCCGTTGTAGCTCTACCTAGCAATTTGAAGTCTAGTCAAACTTCCATTTCATTGTGA GCACCGCCAGCCTTTTCGGCCAAAACTAAACCATATTGCACTTCAGCGTTGTTCCTTCCAACGCTGTACTGCGGCATTGTCTGATAGCCGCCCGCCATGGCAGAGAAGCTTCTCAGTTCTCCTTCCCTATAACTAGTTTCTCTCCTCATCTTTGCCATCTCCTCTAATGAACCTGCTCTAAGCCCACAAAATTTAATTTTTACAGGCCCCCAGCTTTTATTGCTGCTTTCTGGATTTTCCTATCTTGCAGCGACCAGGGAGGACAGAATTAATTCCGGTTCAAACCAGAATAAGTTATCACTACCCCATCAAGTTCTACACAACATTGTATATTCGTATATTCCATCGATTAGAGGTTTTCCTTGTCTGAGATCTAGAACAGAACTGAAACAATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAATTACAGTTCCAGGCAACTCAGGTGCCGAAGTTGAAGAAATCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGGAAGGCAACAGTGAAGCTAGAGAAAGCTGCTATTCAGGATGGAACTTGTTTCTGGGAGAATCCTATCTATGAAACAGTCAAGCTTGTTAGAGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTTGTTTCAACTGGATCATCCAAATCTGGCTTTGTAGGTGAAGCTTCGATCGACTTTGCAGATTTTGAGGCGGAGACTGAACCCATGACTGTTTCCCTACCTCTTAAGTTTGCAAACTCTGGTGCCATATTACACGTTGGTTCTCTCTATCTCTCTCCATCCGTTGTAGCTCTACCTAGCAATTTGAAGTCTAGTCAAACTTCCATTTCATTGTGA ATGTTCAAATCATGGAGCAAGAAGCAGAAGATCAAAGCTGTATTCAAATTACAGTTCCAGGCAACTCAGGTGCCGAAGTTGAAGAAATCGGCTTTGATGATATCTTTGGTGCCAGATGATGTGGGGAAGGCAACAGTGAAGCTAGAGAAAGCTGCTATTCAGGATGGAACTTGTTTCTGGGAGAATCCTATCTATGAAACAGTCAAGCTTGTTAGAGAGATAAAAACAGGAAAAATCAATGAGAAAATTTACCATTTTGTTGTTTCAACTGGATCATCCAAATCTGGCTTTGTAGGTGAAGCTTCGATCGACTTTGCAGATTTTGAGGCGGAGACTGAACCCATGACTGTTTCCCTACCTCTTAAGTTTGCAAACTCTGGTGCCATATTACACGTTGGTTCTCTCTATCTCTCTCCATCCGTTGTAGCTCTACCTAGCAATTTGAAGTCTAGTCAAACTTCCATTTCATTGTGA MFKSWSKKQKIKAVFKLQFQATQVPKLKKSALMISLVPDDVGKATVKLEKAAIQDGTCFWENPIYETVKLVREIKTGKINEKIYHFVVSTGSSKSGFVGEASIDFADFEAETEPMTVSLPLKFANSGAILHVGSLYLSPSVVALPSNLKSSQTSISL
BLAST of Carg08414 vs. NCBI nr
Match: XP_023532939.1 (myosin-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg08414 vs. NCBI nr
Match: XP_022957719.1 (myosin-1-like [Cucurbita moschata]) HSP 1 Score: 256.1 bits (653), Expect = 7.5e-65 Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg08414 vs. NCBI nr
Match: XP_022995712.1 (early endosome antigen 1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64 Identity = 128/132 (96.97%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg08414 vs. NCBI nr
Match: XP_022995710.1 (early endosome antigen 1-like isoform X1 [Cucurbita maxima] >XP_022995711.1 early endosome antigen 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64 Identity = 128/132 (96.97%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg08414 vs. NCBI nr
Match: XP_022952238.1 (interaptin isoform X1 [Cucurbita moschata]) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg08414 vs. TAIR10
Match: AT5G52280.1 (Myosin heavy chain-related protein) HSP 1 Score: 202.6 bits (514), Expect = 1.8e-52 Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of Carg08414 vs. TAIR10
Match: AT5G41140.1 (Myosin heavy chain-related protein) HSP 1 Score: 151.4 bits (381), Expect = 4.7e-37 Identity = 82/137 (59.85%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Carg08414 vs. TAIR10
Match: AT1G63300.1 (Myosin heavy chain-related protein) HSP 1 Score: 143.7 bits (361), Expect = 9.9e-35 Identity = 73/136 (53.68%), Postives = 100/136 (73.53%), Query Frame = 0
BLAST of Carg08414 vs. TAIR10
Match: AT1G22060.1 (LOCATED IN: vacuole) HSP 1 Score: 117.5 bits (293), Expect = 7.6e-27 Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of Carg08414 vs. TrEMBL
Match: tr|A0A1S3CQ89|A0A1S3CQ89_CUCME (myosin-11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg08414 vs. TrEMBL
Match: tr|A0A1S3CRB4|A0A1S3CRB4_CUCME (myosin-J heavy chain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503463 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg08414 vs. TrEMBL
Match: tr|A0A0A0LEL2|A0A0A0LEL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914010 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63 Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Carg08414 vs. TrEMBL
Match: tr|A0A2P4I808|A0A2P4I808_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_56227 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57 Identity = 112/132 (84.85%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of Carg08414 vs. TrEMBL
Match: tr|A0A151U6B1|A0A151U6B1_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_007500 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.2e-56 Identity = 109/132 (82.58%), Postives = 123/132 (93.18%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |