Carg24771 (gene) Silver-seed gourd

NameCarg24771
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRPM1-interacting protein 4-like
LocationCucurbita_argyrosperma_scaffold_305 : 123746 .. 126344 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGTTCGCCAAACTTCTCCGTTCAAAACGGAAATGATTATTTGCAGATCTGTCTTGCAATTGTAATTGCAACTTTATCCGATTTCCAAAGCGTTTTCACATTAATTCTCTGGATTATGCTTCTGGTCCTACTTCGAGTCCAATAATGTCGCTAGAGCAGGTCAATAATTTAATGGAAGTTCGCTTTTCTTTAGTTTATTGGTTTATTGTTCATCAATATTTTCGCCTCGGGTTCTGCTTGCTAATGGAGGTCGTAATATCTAGCGTGGGTTGAGCCTTTTAGCTCGGTCGAGGGTATATGTCCAAATCAGTTGACTAGTGCTTAGGTTAGCTTATTGTTTTGCTTGTTTTTCCTTTTCTCCTTTATCGGGTACTGCTTGCTTATGGAGGTCGTAATGCAGAATCGCGGTCGTAATCTCTAGCATGGGTTGAGCCTTTTGGCTCCATGTTTTCCTTTCGAGCTAAAAGGCGTCCAATGCCAATGTTAATTGCCTTAATTCATGTGGGATATCTTATTCATAGACAATTCATGAACAATACCACAACACTGATAACAATAATGTGATTTTTTACCATGAATTTGATACCGTCTCTGGTTGAGTGATATCATGGCTGGATGCTTCAAAGAAAATATTTATCCCTTATTTTTCACCATGAGCAAGTTCATCTTTCATATGAGATTCGAAAATGTTCTGTTTCAATGATTATTTTATAATATCGGTCAACTAATCAGATCATTTTGCGCACGAACACGATCCTGTTCATAACGAAAAATCTAGTTTCTTTGCTTATGGTAGGTGTTGGATGATAAAAGTCCCACATCTGCTAATTTAGGGAATGATCATGGGTTTATAAATAAATAATACTCCCTCCGTTGGTATGAGGCCTTTTCGGTTCCCCAAAAGCAAAGCTATGAGAGCTTATGCTCAAAGTAGACAATATCATACCATTGTGGAGAATCGTGTTCGTCTAACGGTTGGTCCTCTGAAAATAGATTAGTAAATATTTTCTTTTACTGCTGCAGCGGAGTTCACAAGTACCAAAATTTGGTAAGTGGGATGATGGGGATGATGTCCCGTATACAGCCTATTTTGACAATGCCACAAAGGCTAAATTAGTGAGGATAAATATGAACGATCCTTCTCTTGACCAAGTGGAGATTTTAGACACAGTGAGGTCAAACTATGAGCAACACAGAATCAAAGAAGGTGTTCTTGTGAGGAGGCAAACCGAGTCTCCATTGCACCACGATGCCCCGGAAATGCCTGGTCGGGATTCTAATGGTATAAAGTCAGCGAAGAGTCGAGGTCAACAAGCATCAAGGCCAAAGCATGCACAAGAAGATTTGGGCTTGGAAGATGGTAACATGAAGAAACACGTTGATTCCCCTTTGGACCATCAATCAATAGGTCGGGTAAGCTTTAACTCGCCTCGTCATCAACGTCAGGCTAAATCTCCACATCATCAACGCGAGGGCAATAACACGACCAGTAATTCATCAAAAAGGACTACGAGAAATGGCGTAGGTTCTGACTGCAGCATAGAAAATTCACCTCTTCATCCACGGCAGCATCCAAGGACTGAAGCAAAAACTGCAGTACCATCTTCGCCATTACGAGAAAGAAGGGGTTCAGGTTCGCCTAAAGGAGGTAGTCATGATGGTTTAGCTCCCTCGACTCCCGGAAGATCACGTCAACGATCTGTTCCTCGGGGCAATGAAAGCGTAGCTTCTTTTTCTCATTTCCTTCATTCACTCTTGATAACATGACTTTGAATGACATAATCTGTTATGTTTGATCTTGCAGCCGGATCGTAGTGCCACTGTCCCAAAATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACAGTGGCATTTTCACCAGAGTGCGCGAGGAGAGACAATCTGAGGACGGAAGTTTGCGGGTTGGGACTAATGTTTCTAGCGCCACGAGTCGTAAACGTTCTGAAAATTCTAAGGTACGCCATTCTTTAACACGAGATCTTTTACTCTTATTTCCCATTAGAATCACTACTGAACTCAAAAGCTCAAAAGCAAATCTGTGATTTACCAAATCAAAAGATGATGTGATCATGGATGATGGGTTGGTTTGTTGGGTGTGATTATTTTGAAAATTTAGCTCAAATTTAGCCATTTTCATGCAAAAGTTCTAGGTTGATAAAAGTATGTGATTTATTCTTCATACAGAGATGTGGCTGTTTTCCATGGGGGAAATGATTGCTCGGTGTCACGGTGAGTGCGTGGTGACACTTACGAGTGCAATTGTGACACTTAGCTCGGTGGAACGGGAATGGCGAGGAATTGTTTAATGGAAGCCTGTGTGCCGGCAGGCACATATGGCCAAGAGGTTAGTGGCAAGGCTTTGTTCTTTTTGGGTATATGCTCTATGAATGCCACCACCTCTTTTTTATTCAAAACATTTATCATTGGTGACGACGTATGTATTATCTGGTGCCCTTGAATCGGTAACCATCTTTAGAATGAGGATTAGATTAATATCGTTATCTGAATTTCAATTTTATTGATAAAATATTCCTTAAAAAAAATGATAAAAATTAATATTATAATT

mRNA sequence

TCTGTTCGCCAAACTTCTCCGTTCAAAACGGAAATGATTATTTGCAGATCTGTCTTGCAATTGTAATTGCAACTTTATCCGATTTCCAAAGCGTTTTCACATTAATTCTCTGGATTATGCTTCTGGTCCTACTTCGAGTCCAATAATGTCGCTAGAGCAGGTCAATAATTTAATGGAAGTTCGCTTTTCTTTAGTTTATTGGTTTATTGTTCATCAATATTTTCGCCTCGGGTTCTGCTTGCTAATGGAGCGGAGTTCACAAGTACCAAAATTTGGTAAGTGGGATGATGGGGATGATGTCCCGTATACAGCCTATTTTGACAATGCCACAAAGGCTAAATTAGTGAGGATAAATATGAACGATCCTTCTCTTGACCAAGTGGAGATTTTAGACACAGTGAGGTCAAACTATGAGCAACACAGAATCAAAGAAGGTGTTCTTGTGAGGAGGCAAACCGAGTCTCCATTGCACCACGATGCCCCGGAAATGCCTGGTCGGGATTCTAATGGTATAAAGTCAGCGAAGAGTCGAGGTCAACAAGCATCAAGGCCAAAGCATGCACAAGAAGATTTGGGCTTGGAAGATGGTAACATGAAGAAACACGTTGATTCCCCTTTGGACCATCAATCAATAGGTCGGGTAAGCTTTAACTCGCCTCGTCATCAACGTCAGGCTAAATCTCCACATCATCAACGCGAGGGCAATAACACGACCAGTAATTCATCAAAAAGGACTACGAGAAATGGCGTAGGTTCTGACTGCAGCATAGAAAATTCACCTCTTCATCCACGGCAGCATCCAAGGACTGAAGCAAAAACTGCAGTACCATCTTCGCCATTACGAGAAAGAAGGGGTTCAGGTTCGCCTAAAGGAGGTAGTCATGATGGTTTAGCTCCCTCGACTCCCGGAAGATCACGTCAACGATCTGTTCCTCGGGGCAATGAAAGCCCGGATCGTAGTGCCACTGTCCCAAAATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACAGTGGCATTTTCACCAGAGTGCGCGAGGAGAGACAATCTGAGGACGGAAGTTTGCGGGTTGGGACTAATGTTTCTAGCGCCACGAGTCGTAAACGTTCTGAAAATTCTAAGATGTGGCTGTTTTCCATGGGGGAAATGATTGCTCGGTGTCACGGTGAGTGCGTGGTGACACTTACGAGTGCAATTGTGACACTTAGCTCGGTGGAACGGGAATGGCGAGGAATTGTTTAATGGAAGCCTGTGTGCCGGCAGGCACATATGGCCAAGAGGTTAGTGGCAAGGCTTTGTTCTTTTTGGGTATATGCTCTATGAATGCCACCACCTCTTTTTTATTCAAAACATTTATCATTGGTGACGACGTATGTATTATCTGGTGCCCTTGAATCGGTAACCATCTTTAGAATGAGGATTAGATTAATATCGTTATCTGAATTTCAATTTTATTGATAAAATATTCCTTAAAAAAAATGATAAAAATTAATATTATAATT

Coding sequence (CDS)

ATGTCGCTAGAGCAGGTCAATAATTTAATGGAAGTTCGCTTTTCTTTAGTTTATTGGTTTATTGTTCATCAATATTTTCGCCTCGGGTTCTGCTTGCTAATGGAGCGGAGTTCACAAGTACCAAAATTTGGTAAGTGGGATGATGGGGATGATGTCCCGTATACAGCCTATTTTGACAATGCCACAAAGGCTAAATTAGTGAGGATAAATATGAACGATCCTTCTCTTGACCAAGTGGAGATTTTAGACACAGTGAGGTCAAACTATGAGCAACACAGAATCAAAGAAGGTGTTCTTGTGAGGAGGCAAACCGAGTCTCCATTGCACCACGATGCCCCGGAAATGCCTGGTCGGGATTCTAATGGTATAAAGTCAGCGAAGAGTCGAGGTCAACAAGCATCAAGGCCAAAGCATGCACAAGAAGATTTGGGCTTGGAAGATGGTAACATGAAGAAACACGTTGATTCCCCTTTGGACCATCAATCAATAGGTCGGGTAAGCTTTAACTCGCCTCGTCATCAACGTCAGGCTAAATCTCCACATCATCAACGCGAGGGCAATAACACGACCAGTAATTCATCAAAAAGGACTACGAGAAATGGCGTAGGTTCTGACTGCAGCATAGAAAATTCACCTCTTCATCCACGGCAGCATCCAAGGACTGAAGCAAAAACTGCAGTACCATCTTCGCCATTACGAGAAAGAAGGGGTTCAGGTTCGCCTAAAGGAGGTAGTCATGATGGTTTAGCTCCCTCGACTCCCGGAAGATCACGTCAACGATCTGTTCCTCGGGGCAATGAAAGCCCGGATCGTAGTGCCACTGTCCCAAAATTTGGTGACTGGGATGAGAGCGATCCAACATCATCTGAGAACTACAGTGGCATTTTCACCAGAGTGCGCGAGGAGAGACAATCTGAGGACGGAAGTTTGCGGGTTGGGACTAATGTTTCTAGCGCCACGAGTCGTAAACGTTCTGAAAATTCTAAGATGTGGCTGTTTTCCATGGGGGAAATGATTGCTCGGTGTCACGGTGAGTGCGTGGTGACACTTACGAGTGCAATTGTGACACTTAGCTCGGTGGAACGGGAATGGCGAGGAATTGTTTAA

Protein sequence

MSLEQVNNLMEVRFSLVYWFIVHQYFRLGFCLLMERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHRIKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKHVDSPLDHQSIGRVSFNSPRHQRQAKSPHHQREGNNTTSNSSKRTTRNGVGSDCSIENSPLHPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSKMWLFSMGEMIARCHGECVVTLTSAIVTLSSVEREWRGIV
BLAST of Carg24771 vs. NCBI nr
Match: XP_022924640.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 543.9 bits (1400), Expect = 4.2e-151
Identity = 287/296 (96.96%), Postives = 288/296 (97.30%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 93
           M RSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR
Sbjct: 1   MARSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 60

Query: 94  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKH 153
           IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLED NMKKH
Sbjct: 61  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDANMKKH 120

Query: 154 VDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSPL 213
           VDSPLDHQSIGRVSFNSPRHQRQ  XXXXXXXXXX    SSKRTTRNGVGSDCSIENSPL
Sbjct: 121 VDSPLDHQSIGRVSFNSPRHQRQXXXXXXXXXXXXMTSNSSKRTTRNGVGSDCSIENSPL 180

Query: 214 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 273
           HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQ+SVPRGNESPDRSA
Sbjct: 181 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQQSVPRGNESPDRSA 240

Query: 274 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK
Sbjct: 241 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 296

BLAST of Carg24771 vs. NCBI nr
Match: XP_022924641.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 535.8 bits (1379), Expect = 1.2e-148
Identity = 285/296 (96.28%), Postives = 286/296 (96.62%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 93
           M RSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR
Sbjct: 1   MARSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 60

Query: 94  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKH 153
           IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLED NMKKH
Sbjct: 61  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDANMKKH 120

Query: 154 VDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSPL 213
           VDSPLDHQSIGRVSFNSPRHQRQ  XXXXXXXXXX    SSKRTTRNGVGSDCSIENSPL
Sbjct: 121 VDSPLDHQSIGRVSFNSPRHQRQXXXXXXXXXXXXMTSNSSKRTTRNGVGSDCSIENSPL 180

Query: 214 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 273
           HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQ+SVPRGN  PDRSA
Sbjct: 181 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQQSVPRGN--PDRSA 240

Query: 274 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK
Sbjct: 241 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 294

BLAST of Carg24771 vs. NCBI nr
Match: XP_022980362.1 (uncharacterized protein LOC111479753 isoform X1 [Cucurbita maxima])

HSP 1 Score: 531.9 bits (1369), Expect = 1.7e-147
Identity = 270/297 (90.91%), Postives = 277/297 (93.27%), Query Frame = 0

Query: 33  LMERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQH 92
           +M+RSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVR+NMNDPSLDQVEIL TVRSNYEQH
Sbjct: 5   VMKRSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRLNMNDPSLDQVEILGTVRSNYEQH 64

Query: 93  RIKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKK 152
           RIKEGVLVRRQTESPLHHDAPEMPGRDSNGIKS KS+GQQASRPKHAQEDL LEDGNMKK
Sbjct: 65  RIKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSTKSQGQQASRPKHAQEDLSLEDGNMKK 124

Query: 153 HVDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSP 212
           H+DSPLDHQS+GRVSFNSPRHQRQA               SSKRTTRNGVGSDCSIENSP
Sbjct: 125 HLDSPLDHQSLGRVSFNSPRHQRQAISPHHQREGNNMTSNSSKRTTRNGVGSDCSIENSP 184

Query: 213 LHPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRS 272
           LHPRQH RTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRS
Sbjct: 185 LHPRQHLRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRS 244

Query: 273 ATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           ATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSR +SENSK
Sbjct: 245 ATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRNQSENSK 301

BLAST of Carg24771 vs. NCBI nr
Match: XP_022980364.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 530.8 bits (1366), Expect = 3.7e-147
Identity = 270/296 (91.22%), Postives = 275/296 (92.91%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 93
           M RSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVR+NMNDPSLDQVEIL TVRSNYEQHR
Sbjct: 1   MARSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRLNMNDPSLDQVEILGTVRSNYEQHR 60

Query: 94  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKH 153
           IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKS KS+GQQASRPKHAQEDL LEDGNMKKH
Sbjct: 61  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSTKSQGQQASRPKHAQEDLSLEDGNMKKH 120

Query: 154 VDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSPL 213
           +DSPLDHQS+GRVSFNSPRHQRQA               SSKRTTRNGVGSDCSIENSPL
Sbjct: 121 LDSPLDHQSLGRVSFNSPRHQRQAISPHHQREGNNMTSNSSKRTTRNGVGSDCSIENSPL 180

Query: 214 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 273
           HPRQH RTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA
Sbjct: 181 HPRQHLRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 240

Query: 274 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSR +SENSK
Sbjct: 241 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRNQSENSK 296

BLAST of Carg24771 vs. NCBI nr
Match: XP_023528496.1 (uncharacterized protein LOC111791404 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.1 bits (1346), Expect = 7.7e-145
Identity = 279/296 (94.26%), Postives = 283/296 (95.61%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 93
           M RSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR
Sbjct: 1   MARSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 60

Query: 94  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKH 153
           IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKH+QED GLEDGNMKK 
Sbjct: 61  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHSQEDSGLEDGNMKKP 120

Query: 154 VDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSPL 213
           VDSPLDHQSIGRVSFNSPRHQRQ  XXXXXXXXXXXXX SSKRTTRNGVGSDCSIENSPL
Sbjct: 121 VDSPLDHQSIGRVSFNSPRHQRQXXXXXXXXXXXXXXXNSSKRTTRNGVGSDCSIENSPL 180

Query: 214 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 273
           HPRQHPR EAKT VPSSPLRERRG+GSPKGGSHDGLAPSTPGRSRQRSVPRGNE+PDRSA
Sbjct: 181 HPRQHPRNEAKTVVPSSPLRERRGAGSPKGGSHDGLAPSTPGRSRQRSVPRGNETPDRSA 240

Query: 274 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSL VG NVS+  SR RSENSK
Sbjct: 241 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLPVGVNVSNTKSRNRSENSK 296

BLAST of Carg24771 vs. TAIR10
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-12
Identity = 81/306 (26.47%), Postives = 121/306 (39.54%), Query Frame = 0

Query: 38  SQVPKFGKWDDGDDVPYTAYFDNATKAKLVR---INMNDPSLDQVEILDTVRSNYEQHRI 97
           S VPKFG W+  ++VPYTAYFD A K +      +N NDP  +                 
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNS---------------- 63

Query: 98  KEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKHV 157
                   Q+++P H               S++++ +Q    + ++E       +M+   
Sbjct: 64  ------DSQSQAPPHP-------------PSSRTKPEQVDTVRRSRE-------HMRSRE 123

Query: 158 DSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIEN-SPL 217
           +S L        S N   ++RQ                   R ++N      S +N SPL
Sbjct: 124 ESELKQFGDAGGSSNEAANKRQG------------------RASQNN-----SYDNKSPL 183

Query: 218 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 277
           H                              S+DG   S P  +  R+    +ESP++  
Sbjct: 184 HK----------------------------NSYDGTGKSRPKPTNLRA----DESPEKVT 209

Query: 278 TVPKFGDWDESDPTSSENYSGIFTRVREERQS---EDGSLRVGTNVSSATSRKRSENSKM 337
            VPKFGDWDE++P+S++ Y+ IF +VREER S     GS R  T+ S   SR  +  S  
Sbjct: 244 VVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQS---SRNPNNTSSC 209

BLAST of Carg24771 vs. TAIR10
Match: AT5G18310.2 (unknown protein)

HSP 1 Score: 45.8 bits (107), Expect = 6.6e-05
Identity = 14/34 (41.18%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 35 ERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVR 69
          ++S Q+P+FG+W++ +++P T YF+N  +A L+R
Sbjct: 11 KKSGQIPRFGEWEEANEMPITQYFENPRQAGLIR 44

BLAST of Carg24771 vs. TAIR10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 42.0 bits (97), Expect = 9.5e-04
Identity = 19/55 (34.55%), Postives = 34/55 (61.82%), Query Frame = 0

Query: 275 VPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           +PKFG+WD +DP S+E ++ IF + R++++         TN S   + +R +N+K
Sbjct: 15  LPKFGEWDVNDPASAEGFTVIFAKARDDKK---------TNASGRAASQRRDNNK 60

BLAST of Carg24771 vs. Swiss-Prot
Match: sp|Q8GYN5|RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.9e-11
Identity = 81/306 (26.47%), Postives = 121/306 (39.54%), Query Frame = 0

Query: 38  SQVPKFGKWDDGDDVPYTAYFDNATKAKLVR---INMNDPSLDQVEILDTVRSNYEQHRI 97
           S VPKFG W+  ++VPYTAYFD A K +      +N NDP  +                 
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNS---------------- 63

Query: 98  KEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKHV 157
                   Q+++P H               S++++ +Q    + ++E       +M+   
Sbjct: 64  ------DSQSQAPPHP-------------PSSRTKPEQVDTVRRSRE-------HMRSRE 123

Query: 158 DSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIEN-SPL 217
           +S L        S N   ++RQ                   R ++N      S +N SPL
Sbjct: 124 ESELKQFGDAGGSSNEAANKRQG------------------RASQNN-----SYDNKSPL 183

Query: 218 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 277
           H                              S+DG   S P  +  R+    +ESP++  
Sbjct: 184 HK----------------------------NSYDGTGKSRPKPTNLRA----DESPEKVT 209

Query: 278 TVPKFGDWDESDPTSSENYSGIFTRVREERQS---EDGSLRVGTNVSSATSRKRSENSKM 337
            VPKFGDWDE++P+S++ Y+ IF +VREER S     GS R  T+ S   SR  +  S  
Sbjct: 244 VVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQS---SRNPNNTSSC 209

BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A0A0L7W9|A0A0A0L7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130280 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.5e-117
Identity = 222/296 (75.00%), Postives = 241/296 (81.42%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 93
           M RSSQVPKFGKWDDGDDVPYT YFDNATKAK  R+N ND    + EI +TVRSNYEQH+
Sbjct: 1   MARSSQVPKFGKWDDGDDVPYTTYFDNATKAKFERMNPNDSLPHREEISNTVRSNYEQHK 60

Query: 94  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKH 153
           IKEG +VRRQ ESPLHHDAPE+ GRD NGIKSAKSRGQQ SRPKH QEDLGLED NMKK 
Sbjct: 61  IKEGGVVRRQPESPLHHDAPELSGRDYNGIKSAKSRGQQVSRPKHTQEDLGLEDSNMKKQ 120

Query: 154 VDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSPL 213
           +DSPLDH+S+G+VS NSP HQRQ                SSK T RNG  S+CSIENSPL
Sbjct: 121 LDSPLDHRSMGQVSLNSPLHQRQGN--------HSSTSNSSKGTMRNGTVSECSIENSPL 180

Query: 214 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 273
           H RQHPRTEAKT VPSSPLRERRGS SP+G SH+GLAP TPGRSRQ+SVPRGNE+PDR A
Sbjct: 181 HSRQHPRTEAKTVVPSSPLRERRGSSSPRGSSHEGLAPLTPGRSRQQSVPRGNETPDRGA 240

Query: 274 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           TVPKFGDWDESDP+SSENY+ IFTRVR ERQ+EDGSL  GTNVSS  SR  +ENSK
Sbjct: 241 TVPKFGDWDESDPSSSENYTNIFTRVRVERQTEDGSLPAGTNVSSIRSRSSAENSK 288

BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A1S3AW92|A0A1S3AW92_CUCME (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103483472 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.2e-113
Identity = 217/296 (73.31%), Postives = 236/296 (79.73%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKLVRINMNDPSLDQVEILDTVRSNYEQHR 93
           M RSSQVPKFGKWDDGDDVPYT YFDNATKAK  R+N NDP   + EI +TVRSNYE  +
Sbjct: 1   MARSSQVPKFGKWDDGDDVPYTTYFDNATKAKFERMNPNDPLPHREEISETVRSNYENQK 60

Query: 94  IKEGVLVRRQTESPLHHDAPEMPGRDSNGIKSAKSRGQQASRPKHAQEDLGLEDGNMKKH 153
           IKEG +VRRQ ESPLHHDAPEM GRD NGIKSAK RGQQ S PKH QEDL +EDGNMKK 
Sbjct: 61  IKEGGVVRRQPESPLHHDAPEMSGRDYNGIKSAKRRGQQLSGPKHTQEDLSMEDGNMKKQ 120

Query: 154 VDSPLDHQSIGRVSFNSPRHQRQAKXXXXXXXXXXXXXXSSKRTTRNGVGSDCSIENSPL 213
           + SPLDH+SIG+VSFNSP HQRQ                SSK T RNG  S+CSIENSPL
Sbjct: 121 LGSPLDHRSIGQVSFNSPLHQRQGN--------NSSTSNSSKGTMRNGTVSECSIENSPL 180

Query: 214 HPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTPGRSRQRSVPRGNESPDRSA 273
           H RQHPRTE KTAVPSSPLR+RRGS SP+  SH+GLAP T GRSR RSVPRGNE+PDR A
Sbjct: 181 HSRQHPRTEPKTAVPSSPLRDRRGSSSPRESSHEGLAPLTLGRSRLRSVPRGNETPDRGA 240

Query: 274 TVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRVGTNVSSATSRKRSENSK 330
           TVP+FGDWDESDP+SSENY+ IFTRVREERQ+EDGSL  GTNVSS  SR  +ENSK
Sbjct: 241 TVPRFGDWDESDPSSSENYTNIFTRVREERQTEDGSLPAGTNVSSIRSRSGAENSK 288

BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A2G2VJ41|A0A2G2VJ41_CAPBA (Uncharacterized protein (Fragment) OS=Capsicum baccatum OX=33114 GN=CQW23_29342 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 9.3e-46
Identity = 128/316 (40.51%), Postives = 180/316 (56.96%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKL-VRINMNDPSLDQVEI-----LDTVRS 93
           +++ SQVPKFG+W+  +DV YT YF+NA K K   ++N NDP   + ++      DT R 
Sbjct: 1   LQKHSQVPKFGEWESDEDVQYTTYFENAAKGKKGSKMNPNDPQNLEAKVKGVNGTDTARR 60

Query: 94  NYEQHRIKEGVLVRRQTESPLHHD----------APEMPGRDSNGIKSAKS--RGQQASR 153
             E+   ++ V +R+ TESP+H D          +P+  G  S G KS     +G +   
Sbjct: 61  KPERFASRDDVELRKSTESPMHPDTMGHKAPTYSSPQRHGEKSGGRKSESETMKGPEIPA 120

Query: 154 PKHAQEDLGLEDGNMKKHVDSPLDHQSIG-RVSFNSPRHQRQAKXXXXXXXXXXXXXXSS 213
           P+H +     E+G ++K  DSPL ++++G R    SP H+                  + 
Sbjct: 121 PRHERRS-SREEGYLRKPTDSPLRNENMGRRTPMESPHHR----------YGGLSGGATP 180

Query: 214 KRTTRNGVGSDCSIENSPLHPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTP 273
           KR ++  VG D SIE+SPLH   H RT  K  V SSP  ER+ S     GSH GLAPSTP
Sbjct: 181 KRASQQSVGPDRSIEHSPLHSHSHGRTGGKGGVVSSPSWERKASSE---GSH-GLAPSTP 240

Query: 274 GRSRQRSVPRGNESPDRSATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRV-- 328
           GRSR RSV +G+++PD S  VPKFGDWDE+DP S+E Y+ IF +VREE+Q+  G+ +V  
Sbjct: 241 GRSRLRSVTKGDDTPDDSPAVPKFGDWDENDPASAEGYTQIFNKVREEKQT--GAAKVPA 299

BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A2G3AVA1|A0A2G3AVA1_CAPCH (Uncharacterized protein (Fragment) OS=Capsicum chinense OX=80379 GN=BC332_32904 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45
Identity = 127/316 (40.19%), Postives = 179/316 (56.65%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKL-VRINMNDPSLDQVEI-----LDTVRS 93
           +++ SQVPKFG+W+  +DV YT YF+NA K K   ++N NDP   + ++      DT R 
Sbjct: 1   LQKHSQVPKFGEWESDEDVQYTTYFENAAKGKKGSKMNPNDPQNLEAKVKGVNGTDTARR 60

Query: 94  NYEQHRIKEGVLVRRQTESPLHHD----------APEMPGRDSNGIKSAKS--RGQQASR 153
             E+   ++ V +R+ TESP+H D          +P+  G  S G KS     +G +   
Sbjct: 61  KPERFASRDDVELRKSTESPMHPDTMGHKAPTYSSPQRHGEKSGGRKSESETMKGPEIPA 120

Query: 154 PKHAQEDLGLEDGNMKKHVDSPLDHQSIG-RVSFNSPRHQRQAKXXXXXXXXXXXXXXSS 213
           P+H +     E+G ++K  DSPL ++++G R    SP H+                  + 
Sbjct: 121 PRHERRS-SREEGYLRKPTDSPLRNENMGRRTPMESPHHR----------YGGLSGGATP 180

Query: 214 KRTTRNGVGSDCSIENSPLHPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTP 273
           KR ++  VG D SIE+SPLH   H RT  K  V SSP  ER+ S     GSH GLAPSTP
Sbjct: 181 KRASQQSVGPDRSIEHSPLHSHSHGRTGGKGGVVSSPSWERKASSE---GSH-GLAPSTP 240

Query: 274 GRSRQRSVPRGNESPDRSATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRV-- 328
           GRSR RSV +G+++PD    VPKFGDWDE+DP S+E Y+ IF +VREE+Q+  G+ +V  
Sbjct: 241 GRSRLRSVTKGDDTPDDGPAVPKFGDWDENDPASAEGYTQIFNKVREEKQT--GAAKVPA 299

BLAST of Carg24771 vs. TrEMBL
Match: tr|A0A1U8F6V1|A0A1U8F6V1_CAPAN (RPM1-interacting protein 4-like isoform X2 OS=Capsicum annuum OX=4072 GN=LOC107851076 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45
Identity = 128/316 (40.51%), Postives = 179/316 (56.65%), Query Frame = 0

Query: 34  MERSSQVPKFGKWDDGDDVPYTAYFDNATKAKL-VRINMNDPSLDQVEI-----LDTVRS 93
           M + SQVPKFG+W+  +DV YT YF+NA K K   ++N NDP   + ++      DT R 
Sbjct: 1   MAKHSQVPKFGEWESDEDVQYTTYFENAAKGKKGSKMNPNDPQNLEAKVKGVNGTDTARR 60

Query: 94  NYEQHRIKEGVLVRRQTESPLHHD----------APEMPGRDSNGIKSAKS--RGQQASR 153
             E+   ++ V +R+ TESP+H D          +P+  G  S G KS     +G +   
Sbjct: 61  KPERFASRDDVELRKSTESPMHPDTMGHKAPTYSSPQRHGEKSGGRKSESETMKGPEIPA 120

Query: 154 PKHAQEDLGLEDGNMKKHVDSPLDHQSIG-RVSFNSPRHQRQAKXXXXXXXXXXXXXXSS 213
           P+H +     E+G ++K  +SPL ++++G R    SP H+                  + 
Sbjct: 121 PRHERRS-SREEGYLRKPTESPLRNENMGRRTPMESPHHR----------YGGLSGGATP 180

Query: 214 KRTTRNGVGSDCSIENSPLHPRQHPRTEAKTAVPSSPLRERRGSGSPKGGSHDGLAPSTP 273
           KR ++  VG D SIE+SPLH   H RT  K  V SSP  ER+ S     GSH GLAPSTP
Sbjct: 181 KRASQQSVGPDRSIEHSPLHSHSHGRTGGKGGVVSSPSWERKASSE---GSH-GLAPSTP 240

Query: 274 GRSRQRSVPRGNESPDRSATVPKFGDWDESDPTSSENYSGIFTRVREERQSEDGSLRV-- 328
           GRSR RSV +G+++PD S  VPKFGDWDE+DP S+E Y+ IF +VREE+Q+  G+ +V  
Sbjct: 241 GRSRLRSVTKGDDTPDDSPAVPKFGDWDENDPASAEGYTQIFNKVREEKQT--GAAKVPA 299

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022924640.14.2e-15196.96RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata][more]
XP_022924641.11.2e-14896.28RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata][more]
XP_022980362.11.7e-14790.91uncharacterized protein LOC111479753 isoform X1 [Cucurbita maxima][more]
XP_022980364.13.7e-14791.22RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima][more]
XP_023528496.17.7e-14594.26uncharacterized protein LOC111791404 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G25070.13.2e-1226.47RPM1 interacting protein 4[more]
AT5G18310.26.6e-0541.18unknown protein[more]
AT5G40645.19.5e-0434.55RPM1-interacting protein 4 (RIN4) family protein[more]
Match NameE-valueIdentityDescription
sp|Q8GYN5|RIN4_ARATH5.9e-1126.47RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0L7W9|A0A0A0L7W9_CUCSA3.5e-11775.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130280 PE=4 SV=1[more]
tr|A0A1S3AW92|A0A1S3AW92_CUCME5.2e-11373.31RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103483472 PE=4 SV=... [more]
tr|A0A2G2VJ41|A0A2G2VJ41_CAPBA9.3e-4640.51Uncharacterized protein (Fragment) OS=Capsicum baccatum OX=33114 GN=CQW23_29342 ... [more]
tr|A0A2G3AVA1|A0A2G3AVA1_CAPCH2.7e-4540.19Uncharacterized protein (Fragment) OS=Capsicum chinense OX=80379 GN=BC332_32904 ... [more]
tr|A0A1U8F6V1|A0A1U8F6V1_CAPAN2.7e-4540.51RPM1-interacting protein 4-like isoform X2 OS=Capsicum annuum OX=4072 GN=LOC1078... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24771-RACarg24771-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 269..305
e-value: 2.1E-15
score: 55.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..321
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 34..328
NoneNo IPR availablePANTHERPTHR33159:SF6RPM1-INTERACTING PROTEIN 4coord: 34..328