Carg09253-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGTTAGTGGCGGCAACGATAGTTTCGATCAATCCTGCAAACGAGCTCCTCACCATGCCCGGATGGCGCCCCGGTCCTTCTCTCCAGGTCCTCTAATCTCCTGCACCGATTTCCAATTTTTGAAGTGTTTCTGTTTCTCCCTTCGATTAATCGGATTTTTCTGTTGATTTGGAAATGAAAAGCTTCGCTAATCGAGAGGTGAGGCTGCTGCAACACGGTAGGAGCATTGTGGTTGAGGACGACCTAGATATTCGTTGGGAGGAGCTTGCTGGCGAGGTCGTGAACGAGGTCATTTTCTTCAGCCGGCATACTGCCATTTCGAATCGTCCTCCCCTCACTGTTCATCGGATTGGTACGATTCCAGTGTTTCTTTACTCAGTTTCTTTAATCAATATAGAAGATACGATGTTGTTTGGACTTAGAGGTTTTCATGCCCTAAATGTTTCATTCCCCTCTCCAACCATTGAGGTGTTACAAATGGTATCAGACTCTGACATTAGGCGATGTGTCAGGAGGTTGAGTTTCGAAGGGGTGGACACGAGGTGGTGTCCAAACAAAGACATTAGGTCTCGAAGGGAGTGGATTAGGGGAATCCCACATCGATTGGAGAAGGGAACGAGTGTCATCGAGGATGCTAGCCCCCAAAGGGGTGGATTGTGGGACCCCACATCAACTGTGGAGGTGAACGAAACATTGTTTACAAGGGTGTGGAAACCTCTCCCTAACACGCTGGGCCTAAAGGAGTGGATTAGGGATCCCACATCGATTGGAGAAGGGAACGAATGATATCGAGGACAATGATCCCGAAGGGGGTGGATTGTGATCTCTTCTATGAGATCCCACCTCGGTTGAAGAGGGAAACGATGTATTAGGATGTAGAACCCTCTCCCTAGCAGGCGCGTTTTTAAACCTTAAGGGGAAGCTCGAAAGAGAAAGCTCAAAAGAGGACAATATCTACTAGTGGTGGGCTTAGACCGTTACATTTCCAACTTTTATTTAAATTTATAATCGCTCTATCTGCTTGATAACATGTCACCGAAGCTAGCTCGGTCTCTTTGTATCATCATTTTATCGCTCATTTGTTGGTCTGCATTATTCAAAATAATTTCTAAGCCTACCCATGAAAAAGATGTCTATGTAATCACCGCTAGCAGATATTGTTCTCTTTGTGCTTTTAGCCTCCCTTTAAGTTTTAAAACACTGAGTTTCTACACTCTTGTAATGAATGCTTTATTATGAATTAAGTTACTAACTACATAACTCGATATGTTTTTAAGCGTTAACAACTTAATTTCGATGCCTTTATAATTTTCCCTTCCTCGATGATATGATTTGCATCGTTCTACCATTTGCTCAACAATATTATCTTTTCGTCGAACGTTTCTATGTTATATAATTTGATACCGTCATCGTGATGCAGGGAACATTACAAGAACAATGAAGTCCTTCTTGGCATCGAGGGTGGACATTATGCACCTCGCCATATGGACATAGTTCTGTAAGTATTGATCGGTCGGGCTGTTCTTCCTGTTAATGTGATCATTTCTTTAGCGTTCATAGGTTAAAAGGCTATTTTTAACTCTATACTTCGAGTCTCGTTCTATTTTAGTGTTTATACTTTCAATATATCTTTAAAAAATAGTTTTTTTTTTTTTAGCAAATTGAATTACGATAGATAATCATTTAATTTTGAAAAATAATCTTATAAATATTGTTTCTACCTATGAGTCTTTATCACGAGTTTTTGCCGCTTTGAAATATTTTCAAAATAGGTAGGTCGGTCTTTCTCGAGATCCCTTGAGCTGAAAGACATGAGACATACATTAAAAAATATGAACCAGGCTCTCGAACGCTCTTGTCTCGTAGGTGAGAAGATATAGGTTGGAAAAACATGTTAATAATCTCCGTAGGCCCTTATACTATTTTATTATCTCCGCAGCCCTAATGGAAGATCGGAACCAGTCAAAGTGAAATACGAACGACAAAGGTATCGGGGGGAGTTGGAGAGAGTCGATTAAAGCCATTCAAGGCTACTAAATTGGCTTCCTTGGTGGAG ATGGCGACGGAACATTACAAGAACAATGAAGTCCTTCTTGGCATCGAGGGTGGACATTATGCACCTCGCCATATGGACATAGTTCTCCCTAATGGAAGATCGGAACCAGTCAAAGTGAAATACGAACGACAAAGGTATCGGGGGGAGTTGGAGAGAGTCGATTAAAGCCATTCAAGGCTACTAAATTGGCTTCCTTGGTGGAG ATGGCGACGGAACATTACAAGAACAATGAAGTCCTTCTTGGCATCGAGGGTGGACATTATGCACCTCGCCATATGGACATAGTTCTCCCTAATGGAAGATCGGAACCAGTCAAAGTGAAATACGAACGACAAAGGTATCGGGGGGAGTTGGAGAGAGTCGATTAA MATEHYKNNEVLLGIEGGHYAPRHMDIVLPNGRSEPVKVKYERQRYRGELERVD
BLAST of Carg09253-RA vs. NCBI nr
Match: XP_008445425.1 (PREDICTED: D-aminoacyl-tRNA deacylase [Cucumis melo]) HSP 1 Score: 55.1 bits (131), Expect = 8.7e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg09253-RA vs. NCBI nr
Match: XP_011657410.1 (PREDICTED: D-aminoacyl-tRNA deacylase [Cucumis sativus] >KGN47672.1 hypothetical protein Csa_6G367180 [Cucumis sativus]) HSP 1 Score: 55.1 bits (131), Expect = 8.7e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg09253-RA vs. NCBI nr
Match: XP_022132337.1 (D-aminoacyl-tRNA deacylase isoform X2 [Momordica charantia]) HSP 1 Score: 55.1 bits (131), Expect = 8.7e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg09253-RA vs. NCBI nr
Match: XP_022132335.1 (D-aminoacyl-tRNA deacylase isoform X1 [Momordica charantia] >XP_022132336.1 D-aminoacyl-tRNA deacylase isoform X1 [Momordica charantia]) HSP 1 Score: 55.1 bits (131), Expect = 8.7e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg09253-RA vs. NCBI nr
Match: XP_022951217.1 (D-aminoacyl-tRNA deacylase [Cucurbita moschata]) HSP 1 Score: 55.1 bits (131), Expect = 8.7e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg09253-RA vs. TAIR10
Match: AT2G03800.1 (D-aminoacyl-tRNA deacylases) HSP 1 Score: 40.4 bits (93), Expect = 4.0e-04 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 0
BLAST of Carg09253-RA vs. TrEMBL
Match: tr|A0A1S3BCQ0|A0A1S3BCQ0_CUCME (D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103488450 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg09253-RA vs. TrEMBL
Match: tr|A0A0A0KGZ7|A0A0A0KGZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367180 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-05 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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