Carg07293 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATGAAATTCGAAAGATGAGGAGAGTAGAAACAGTACCAGAAGGGATGGAGGTGGAGCACGATCAATGTTGTAGCGCCGTCAACAAGCTTAGGGTTCCGCCGGGTTAGAGAGATGAAGACTTGAAGGAGCTCATCTTGGAGTTCCACCATAGCTACGAACTCCGCCTGGCTAATGCTTAATGCTCAGAGGGAAAGGAAAAACAGCTACTGCTAGGGTTCTTTACTTCAAATAAATATATATATATATATTTTGGTAAAATTTAGATTAATTTTCAAATTATAGATAATAAAGTTTTGTTTCCATAAAAATTTAAAAAGAAAAAATCATTTTTAAATGAATTTACTTTGAAACATCTTAATATAATTTTTCTAATAATAAAAATTATAGAAAACTTTGTTTTCAATAAAATAATAATTATTAGATACAAAAGTGAAAATTCTAACATTATTAGATATAAAATTGAAAATTTAACAACTTATTAGAAACTTTTTTAAATTTCAAAACGTGAAACTGGCTCGTTTTTGCTTGTGTTCTAGGGCAATTTCGAAATGGAGCGGTTTTTTCCCACTTATGTGAAAAAAAATTATTTCTTAACATTGTGGTGGGAAATGCCCCAACTCGATGGTTAAGAACCGAATTTTTCGAAACCGGCGCGCTTTCGTTTGTGTTCTAGGGCAGTTCCAAAATGGAGCGGTTTTATTTCTTGGCATTGAGTATACAACAGGGAGGATCGAACCATCAACTCTTGAAATAATAATTGAATCTATTAAAATATCGAGAGTACGAGAGAAGAGACTGATATTATTTTGGAGGTAATGGTCACTAATGTCACAAATATGCATTATGGAAAGTTTGATTTTCAAATATATCTTCCATTTTCACATATAATCGATATCGAAATTGACTGAATGACCATTGGAGAGAGATATCAAAGTTGTCACTCATGAGTATCAAGACTTAGGACTCTGTCTTGTAGATTACGTGTTAGTAAAAAGTTAAGCCATCGAATCTAAAGATTCGAACCTTTGACCTTTTAGTAAATTGTGTATCTTTTATCTCGGTTATAACAATATTAATATTACTAGAGTTTTATAAATTTTATTTAACAATGTGCACCGATATAAAAATTGATAATTTGACCTATTTTTCTTATGACTCACGCCTAGACTCAAATTTGGATTTGACAATATACTGACCCGACCTTGATATTCACTTGCAACATGGTCAGGTTACCTAGTTCTCGTTTCTAAGAATGAAAATTATCCTCACAATCTAAGTGAAAACAAAAAGAAATATGCATCGAGTGATCTTTTTAGTCAGTTTCAAGCGCTAAAACTTACAAAAATTACAAAAAAAAATAGTGAAAATTGAGGAATAAATTAGGTATTAAATAATGGTACGATAAATAATTCACGAAAAAAGAAAATGCAATGATTATAAGTGAAATCATTTTGGACAAATTGAGTATTTTTTAGGCGCAATTGATCGCATTAGATTTTCATCACTTATCTTTCTTATCATTTGGTTTCTTTTTCTGAACAGTGTTAACAACTCTCTACAATGGTATGATATTATCCATTTTGATAATAATTCTCGTGCCTTCTCTAAAAGGTCTCATACTAATGAAACAATCCTCCACTCGAACAAAATACACTATAGAGCCTCCCTGAGGCCTATGGAGCTCTCGAATAACCTCTCTTTAATCGAGGCTCGATTCCTTATCTTAAGCTCTCGAACAAAGTACATTCTTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGATCAAGGCATGACTCTGATACCATGTTAGGAATCACGATCTCACAATGGTATGATAATCTCTCGTGGTTTTACTTTTGACCTTCTCAAAAGATCTCGTACCAATAGAGTTTTTTTTTTTTTTTTTTTAAAAAAAAAAGAACCGATGAAATCATACATTTAACTTTTTTGAATTTTCTTGAAAAAGGCATTCCTTTTTTGACATTATTTTGTTTTGTTCCTAATTATTCATGACAAAAAGTAGATTTTCTTTTTCCCTATAATCACTTCATCTCCCAAAAGGGAACAAACAAAATTAAATAAAAAATAAAAAATAAAAAAAAATGATTGGAAATGAATAGCAAAAATCCCACAATATCACCCATTCTTAAAACACACATCATGGGATTCCCAAAACGATGTCGGCGCATACAACATTGTTGAAATAACTACAACATCGAGCTAAAATAAAAACTTTAAAAAAAATAACACATGATGACTTCGACATTCTCTTGTAACATGATTTATTCCAGCATGTTTTATTTTCATCCATATAAACTTCAGTGAAATTTTTATAAGGTTGTCCAACAGATTTGCTCGAACTAAAACACGCTTAACTATGAACCTTTTATGATTGAGCTACCAAAAAAAAAAAAAGTACACCGTGTTAACAATGGAATCACGACAACTTTTATAAACTATAAAATCATGGTTGAAAAAGACGTCAAAGGAGCATTCATATGCCCTTTGTCCAACAAAAAAAAAAAAAAAAAAAAGTTTTTTTTTTCTTCTCCTTCAAGGGAGCATTTTCCTTCCATAAACATCATCTTGTTTGCCACTTTTATTTTTTACACTTACACCCAAGGTGAATGTACCCACCAAAATAAATAAATATATATATATATATATATATATACACTTAACGGATGATCGGGACATTTTTGTTTAAAATTATTTTTACAGATGAACGATAATTCTAACATGTTTTTTTGACATATTTTCTGACATGTTTTGTCCTTGTTTATATGTCTGTGAAAAGTTTATTTCAAGAGGTCATTTAACTAAGAATTGGTCTAATAGTTCTATTTCACTTCTTGCCGTCTATCACAAAACATATTACAAAGACACCCCACTAAAAAGGAATCACCATCTAATGTGCGCCGGGAGAATAAGACGGGTGAATACAACGACTGAGCAGCCCCCAGTTCCCCGGCAATGCTAAAATGAGCCGTCCGGTTGTATTAAAGGCGTTGGTTTTTCAAGTTCTCCCACCATCCGTTGCTGTGGCTTGTGAGTGCGTTTCTGTTCTGTTCTGTTCTGTTATTTTGCCCTCACAAATTCAGGAAAAAGCGAACAAAACTCAATACAAAACCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCATTTCAGCCTTTTCCGTCTCCCTCTGTGAAATTCGGAGTCAAAACAAGAAAAGGAAAGGAATATGCAAGAAAATGTAGATCAGGGCGTTGAATTTCTCTGTGATTCTCGTCGTTTCTTTTGGTCAAAAAGCTTCAAATCTGTTTCGTTCTGTAAAGGGGCTTGTTAAAATCCAACCCTCTTTCTCTTTGACGTTTTTTGGTTCTTGGGTTTTGGTTTTCGGCTCTTATTTGAGCCTTGAAATCGCCCTTTTCTTGTTTCGTTGTTCTGTTTTTGTTTTTATGACGATTTCGTAAGTTCATCCATGTCGTCCGACATAATTTAGGGTTTAATCTTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGTAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGATTGTTTTACTTATACCTACTCTATTGGAGTCCACTGCGTTAGAAGCTATGCGATATGTGCTGAAATTTGCTGATACCATCTTATTTGTGTTGAATTGTTGAGTTCAGGGGGATGGGAACTGATCCTCTGCTATCACCAGCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG ATGGCGGATGAAATTCGAAAGATGAGGAGAGTAGAAACAGTACCAGAAGGGATGGAGGTGGAGCACGATCAATGTTGTAGCGCCGTCAACAAGCTTAGGGTTCCGCCGGGGTTTAATCTTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGTAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGATTGGGGATGGGAACTGATCCTCTGCTATCACCAGCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG ATGGCGGATGAAATTCGAAAGATGAGGAGAGTAGAAACAGTACCAGAAGGGATGGAGGTGGAGCACGATCAATGTTGTAGCGCCGTCAACAAGCTTAGGGTTCCGCCGGGGTTTAATCTTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGTAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGATTGGGGATGGGAACTGATCCTCTGCTATCACCAGCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG MADEIRKMRRVETVPEGMEVEHDQCCSAVNKLRVPPGFNLALVRVICGGSASKRALTVAVLVLNGLGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
BLAST of Carg07293 vs. NCBI nr
Match: XP_011659262.1 (PREDICTED: uncharacterized protein LOC101216585 [Cucumis sativus] >XP_016901085.1 PREDICTED: uncharacterized protein LOC107991169 [Cucumis melo]) HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06 Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of Carg07293 vs. NCBI nr
Match: XP_012442675.1 (PREDICTED: uncharacterized protein LOC105767649 [Gossypium raimondii] >XP_016724995.1 PREDICTED: uncharacterized protein LOC107936745 [Gossypium hirsutum] >XP_017611053.1 PREDICTED: uncharacterized protein LOC108456847 [Gossypium arboreum]) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. NCBI nr
Match: XP_017230213.1 (PREDICTED: uncharacterized protein LOC108204991 [Daucus carota subsp. sativus]) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. NCBI nr
Match: XP_007162530.1 (hypothetical protein PHAVU_001G159700g [Phaseolus vulgaris] >XP_017442968.1 PREDICTED: uncharacterized protein LOC108347990 [Vigna angularis] >ESW34524.1 hypothetical protein PHAVU_001G159700g [Phaseolus vulgaris] >KRH67359.1 hypothetical protein GLYMA_03G161900 [Glycine max]) HSP 1 Score: 57.0 bits (136), Expect = 4.3e-05 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. NCBI nr
Match: XP_008235704.1 (PREDICTED: uncharacterized protein LOC103334502 [Prunus mume]) HSP 1 Score: 57.0 bits (136), Expect = 4.3e-05 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. TAIR10
Match: AT1G06149.1 (conserved peptide upstream open reading frame 8) HSP 1 Score: 43.5 bits (101), Expect = 8.9e-05 Identity = 22/34 (64.71%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Carg07293 vs. TrEMBL
Match: tr|A0A1S4DZE0|A0A1S4DZE0_CUCME (uncharacterized protein LOC107991169 OS=Cucumis melo OX=3656 GN=LOC107991169 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.6e-06 Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of Carg07293 vs. TrEMBL
Match: tr|A0A1U8MDZ2|A0A1U8MDZ2_GOSHI (uncharacterized protein LOC107936745 OS=Gossypium hirsutum OX=3635 GN=LOC107936745 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-05 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. TrEMBL
Match: tr|A0A0R0KVC3|A0A0R0KVC3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G161900 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.8e-05 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. TrEMBL
Match: tr|A0A1S3TQB3|A0A1S3TQB3_VIGRR (uncharacterized protein LOC106757708 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757708 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.8e-05 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Carg07293 vs. TrEMBL
Match: tr|V7CWL9|V7CWL9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G159700g PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.8e-05 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|